# terms

id: PBO:0066148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 4","termid":"PBO:0066148"}


id: PR:O36020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug126 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 126 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.08","synonyms":[{"name":"Spom972h-mug126","type":"exact"}],"termid":"PR:O36020"}


id: GO:0005693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U12, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U12 snRNP, most of which remain associated with the U12 snRNA both while the U12 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["ISBN:0879695897","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"U12 snRNP","synonyms":[{"name":"snRNP U12","type":"exact"}],"termid":"GO:0005693"}


id: GO:0000477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cleavage within ITS2 to generate the mature 5'-end of an LSU-rRNA derived from a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","synonyms":[{"name":"processing at C1","type":"narrow"}],"termid":"GO:0000477"}


id: PBO:0030174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spheroid_vegetative_cell","termid":"PBO:0030174"}


id: MONDO:0100475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of ichthyosis vulgaris in which the disease presentation is severe in severity. Homozygous FLG mutation carriers often have more severe manifestations.","definition_xrefs":["PMID:23301728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant ichthyosis vulgaris","termid":"MONDO:0007810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"severe ichthyosis vulgaris","termid":"MONDO:0100475","xrefs":{"Monarch":{"xref_id":"0100475"}}}


id: MONDO:0043004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A jauncice caused by severe leptospirosis.","definition_xrefs":["Wikipedia:Leptospirosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leptospirosis","termid":"MONDO:0005825"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weil's disease","secondary_identifiers":["MESH:D014895","UMLS:C0043102","SCTID:398067003","MEDGEN:21912"],"synonyms":[{"name":"Icterohemorrhagic leptospirosis","type":"related"},{"name":"Weil disease","type":"related"},{"name":"Weil's disease","type":"exact"},{"name":"Weils disease","type":"related"},{"name":"disease, Weil","type":"related"},{"name":"disease, Weil's","type":"related"},{"name":"icteric leptospirosis","type":"related"},{"name":"jaundice, spirochetal","type":"related"},{"name":"leptospirosis, icterohemorrhagic","type":"related"},{"name":"spirochetal jaundice","type":"related"}],"termid":"MONDO:0043004","xrefs":{"Monarch":{"xref_id":"0043004"}}}


id: MONDO:0100469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of anosmia, isolated congenital.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anosmia","termid":"MONDO:0010528"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anosmia, isolated congenital, X-linked","secondary_identifiers":["MEDGEN:1794322","OMIM:301700","UMLS:C5562112"],"termid":"MONDO:0100469","xrefs":{"Monarch":{"xref_id":"0100469"}}}


id: MOD:00786
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one or more (2)H deuterium atoms for (1)H protium atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium substituted residue","synonyms":[{"name":"D(H)Res","type":"exact"}],"termid":"MOD:00786"}


id: MONDO:1012780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epidermolysis bullosa simplex that occurs in cattle due to a mutation in the KRT5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, cattle","termid":"MONDO:1011499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, KRT5-related, cattle","secondary_identifiers":["OMIA:002081-9913"],"termid":"MONDO:1012780","xrefs":{"Monarch":{"xref_id":"1012780"}}}


id: PBO:0050405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 7","termid":"PBO:0050405"}


id: MONDO:0015689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, malignant, neoplastic disease characterized by clonal proliferation of myeloid and/or lymphoid precursors harboring rearrangements in the PDGFRA gene, in the blood, bone marrow and often other tissues as well (spleen, lymph nodes, skin, etc.). It usually presents as chronic eosinophilic leukemia or, less commonly, as acute myeloid leukemia or T-lymphoblastic leukemia with eosinophilia. Patients usually present with eosinophilia, anemia, thrombocytopenia, neutrophilia, splenomegaly, lymphadenopathy, fever, sweating and/or weight loss. Tissue infiltration by eosinophils can manifest with skin rash, erythema, cough, neurological alterations, gastrointestinal symptoms or, rarely, endomyocardial fibrosis and restrictive cardiomyopathy.","definition_xrefs":["Orphanet:168947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid/lymphoid neoplasms associated with eosinophilia and abnormality of PDGFRA, PDGFRB, FGFR1 or JAK2","termid":"MONDO:0015688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myeloid neoplasm associated with PDGFRA rearrangement","secondary_identifiers":["UMLS:C4545381","MEDGEN:1620600","ICDO:9965/3","GARD:20106","ONCOTREE:MLNPDGFRA","SCTID:738527001","DOID:0080165","icd11.foundation:833355630","NCIT:C84275"],"synonyms":[{"name":"myeloid and lymphoid neoplasms associated with PDGFRA rearrangement","type":"exact"},{"name":"myeloid and lymphoid neoplasms with PDGFRA rearrangement","type":"exact"},{"name":"myeloid/lymphoid neoplasm associated with PDGFRA rearrangement","type":"related"},{"name":"myeloid/lymphoid neoplasms with PDGFRA rearrangement","type":"exact"}],"termid":"MONDO:0015689","xrefs":{"Monarch":{"xref_id":"0015689"}}}


id: PBO:0079908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase core protein 2 pseudogene 1","termid":"PBO:0079908"}


id: PBQ:0000001
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"A specialized resting state that cells enter in response to cues from the cell's environment. Quiescence is characterized by the absence of cell growth and division, by a reprogramming of global gene expression, and by changes characteristic of the organism and specific cell type. Depending on external conditions, quiescence may persist until cell death or cells may resume cell growth and division. In some cell types or under certain conditions, cellular metabolism may proceed.","definition_xrefs":["PomBase:mah","PomBase:jb"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence","synonyms":[{"name":"G0 phase","type":"related"},{"name":"cell cycle quiescence","type":"related"},{"name":"cellular quiescence","type":"exact"},{"name":"quiescence","type":"broad"}],"termid":"PBQ:0000001"}


id: MONDO:0010139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated thyroid-stimulating hormone (TSH) deficiency is a type of central congenital hypothyroidism, a permanent thyroid deficiency that is present from birth, characterized by low levels of thyroid hormones due to a deficiency in TSH synthesis.","definition_xrefs":["Orphanet:90674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism, congenital, nongoitrous","termid":"MONDO:0000045"},{"relation_name":"is_a","term_name":"central congenital hypothyroidism","termid":"MONDO:0016410"},{"relation_name":"is_a","term_name":"non-acquired pituitary hormone deficiency","termid":"MONDO:0019824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated thyroid-stimulating hormone deficiency","secondary_identifiers":["DOID:0070123","MEDGEN:78786","OMIM:275100","GARD:10129","UMLS:C0271789"],"synonyms":[{"name":"CHNG4","type":"exact"},{"name":"TSH deficiency","type":"related"},{"name":"congenital nongoitrous hypothyroidism 4","type":"related"},{"name":"hypothyroidism, congenital, nongoitrous 4","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, 4","type":"related"},{"name":"hypothyroidism, congenital, nongoitrous, type 4","type":"exact"},{"name":"isolated TSH deficiency","type":"exact"},{"name":"isolated thyrotropin deficiency","type":"exact"},{"name":"pituitary cretinism","type":"related"},{"name":"thyroid-stimulating hormone deficiency","type":"related"},{"name":"thyroid-stimulating hormone, deficiency of","type":"related"},{"name":"thyrotropin deficiency, isolated","type":"related"},{"name":"thyrotropin, biologically inactive","type":"related"}],"termid":"MONDO:0010139","xrefs":{"Monarch":{"xref_id":"0010139"}}}


id: GO:0035516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a methylated nucleobase within DNA + 2-oxoglutarate + O2 = a nucleobase within DNA + formaldehyde + succinate + CO2. Catalyzes oxidative demethylation of the DNA base lesions N1- methyladenine, N3-methylcytosine, N1-methylguanine, and N3- methylthymine. Can also act of RNA.","definition_xrefs":["PMID:19786499","RHEA:30299","PMID:16482161","PMID:18775698","PMID:12594517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"DNA demethylase activity","termid":"GO:0035514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"broad specificity oxidative DNA demethylase activity","secondary_identifiers":["GO:0103053","MetaCyc:RXN-12353","GO:0103051","Reactome:R-HSA-112123","Reactome:R-HSA-112118","GO:0103052","EC:1.14.11.33"],"synonyms":[{"name":"1-ethyladenine demethylase activity","type":"narrow"},{"name":"2-oxoglutarate-dependent DNA demethylase","type":"exact"},{"name":"5-formylcytosine dioxygenase activity","type":"narrow"},{"name":"5-hydroxymethylcytosine dioxygenase activity","type":"narrow"},{"name":"5fC dioxygenase","type":"narrow"},{"name":"5hmC dioxygenase","type":"narrow"},{"name":"N1-methyladenine demethylase activity","type":"narrow"},{"name":"N3-methylcytosine demethylase activity","type":"narrow"},{"name":"oxidative DNA demethylase activity","type":"broad"}],"termid":"GO:0035516"}


id: PBO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-J-shaped_vegetative_cell","termid":"PBO:0036016"}


id: MONDO:0019692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple epiphyseal dysplasia and pseudoachondroplasia (obsolete MONDO:0019692)","secondary_identifiers":["icd11.foundation:2078345611","Orphanet:93429"],"termid":"MONDO:0019692","xrefs":{"Monarch":{"xref_id":"0019692"}}}


id: GO:0030624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U6atac small nuclear RNA (U6atac snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"U6atac snRNA binding","termid":"GO:0030624"}


id: PBO:0034513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_dimethylation_at_double-strand_break_site","termid":"PBO:0034513"}


id: PATO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a substance by virtue of the ease with which the substance can be changed into a gaseous state.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a substance","termid":"PATO:0002198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaporizability","termid":"PATO:0002200"}


id: PBO:0117065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUMA1 antisense RNA 1","termid":"PBO:0117065"}


id: GO:1901729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monensin A.","definition_xrefs":["UniPathway:UPA00178","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"monensin A metabolic process","termid":"GO:1901728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monensin A catabolic process","synonyms":[{"name":"monensin A breakdown","type":"exact"},{"name":"monensin A catabolism","type":"exact"},{"name":"monensin A degradation","type":"exact"},{"name":"monensin breakdown","type":"exact"},{"name":"monensin catabolism","type":"exact"},{"name":"monensin degradation","type":"exact"}],"termid":"GO:1901729"}


id: PBO:0066161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2-type and C3HC4-type zinc finger containing 1","termid":"PBO:0066161"}


id: GO:0004399
data:
  {"annotated_genes":["SJAG_01137"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82117],"is_not":false,"summary":null,"term":"GO:0004399"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-histidinol + 2 NAD+ = 3 H+ + L-histidine + 2 NADH.","definition_xrefs":["RHEA:20641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01137":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"histidinol dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-8001","EC:1.1.1.23"],"termid":"GO:0004399","terms_by_termid":{"GO:0004399":null}}


id: GO:1902230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.","definition_xrefs":["PMID:15314165","GOC:TermGenie","GOC:mtg_apoptosis","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902229"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"down regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to DNA damage","type":"narrow"},{"name":"negative regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902230"}


id: GO:0004357
data:
  {"annotated_genes":["SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79230],"is_not":false,"summary":null,"term":"GO:0004357"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + L-glutamate + ATP = L-gamma-glutamyl-L-cysteine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.2","RHEA:13285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"glutamate-cysteine ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00894","MetaCyc:GLUTCYSLIG-RXN","Reactome:R-HSA-174367","Reactome:R-HSA-5602892"],"synonyms":[{"name":"L-glutamate:L-cysteine gamma-ligase (ADP-forming) activity","type":"related"},{"name":"gamma-glutamyl-L-cysteine synthetase activity","type":"related"},{"name":"gamma-glutamylcysteine synthetase activity","type":"related"},{"name":"gamma-glutamylcysteinyl synthetase activity","type":"related"}],"termid":"GO:0004357","terms_by_termid":{"GO:0004357":null}}


id: PBO:0109461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA-binding protein, human LYAR homolog, involved in rRNA processing","termid":"PBO:0109461"}


id: MONDO:1010938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphosarcoma that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphosarcoma, non-human animal","termid":"MONDO:1010209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphosarcoma, rabbit","secondary_identifiers":["OMIA:000615-9986"],"termid":"MONDO:1010938","xrefs":{"Monarch":{"xref_id":"1010938"}}}


id: PBO:0088323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex WD repeat subunit Vps8","termid":"PBO:0088323"}


id: PBO:0048102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTO pseudogene 1","termid":"PBO:0048102"}


id: PBO:0091445
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PSMD14","termid":"PBO:0091445"}


id: PBO:0089113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heat shock factor (HSF)-type, DNA-binding","termid":"PBO:0089113"}


id: GO:0016973
data:
  {"annotated_genes":["SJAG_00641","SJAG_04721","SJAG_01715","SJAG_01185","SJAG_04115","SJAG_04310","SJAG_03847","SJAG_04202","SJAG_03002","SJAG_01374","SJAG_04379","SJAG_01449","SJAG_05328","SJAG_01529","SJAG_00178","SJAG_00298","SJAG_03986","SJAG_04656","SJAG_04536","SJAG_02704","SJAG_01083","SJAG_00992","SJAG_02534","SJAG_04347","SJAG_01584","SJAG_02209","SJAG_00093","SJAG_04148","SJAG_04017","SJAG_04480"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71648,73150,74803,74956,75528,75913,76144,76240,76486,77467,79116,82233,94053,98426,98840,103312,103780,104569,105866,109586,111830,112401,113103,113731,116458,117804,118056,118316,120039,120958],"is_not":false,"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA export from nucleus","termid":"GO:0006406"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0010467","GO:0051179","GO:0006913"],"is_obsolete":false,"name":"poly(A)+ mRNA export from nucleus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(A) mRNA export from nucleus","type":"exact"},{"name":"poly(A)+ mRNA export from cell nucleus","type":"exact"},{"name":"poly(A)+ mRNA export out of nucleus","type":"exact"},{"name":"poly(A)+ mRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"poly(A)+ mRNA-nucleus export","type":"exact"},{"name":"polyadenylated mRNA export from nucleus","type":"related"}],"termid":"GO:0016973","terms_by_termid":{"GO:0016973":null}}


id: PBO:0004512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrofolatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase (predicted)","termid":"PBO:0004512"}


id: PBO:0075554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPEM family member 2","termid":"PBO:0075554"}


id: SO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed pseudogene where there is evidence, (mass spec data) suggesting that it is also translated.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processed_pseudogene","termid":"SO:0000043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated_processed_pseudogene","synonyms":[{"name":"translated processed pseudogene","type":"exact"}],"termid":"SO:0002105"}


id: GO:0140852
data:
  {"annotated_genes":["SJAG_02319","SJAG_03006","SJAG_00341"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120878,118215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[96218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone substrate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin protein ligase activity","termid":"GO:0061630"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016746","GO:0019787","GO:0016740","GO:0003824","GO:0004842"],"is_obsolete":false,"name":"histone ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140852","terms_by_termid":{"GO:0140850":null,"GO:0140851":null}}


id: PBO:0067271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 346, pseudogene","termid":"PBO:0067271"}


id: PBO:0034024
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approver_name","termid":"PBO:0034024"}


id: PBO:0051042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant delta","termid":"PBO:0051042"}


id: GO:0043595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A layer surrounding a bacterial endospore found inside the outer endospore membrane, but outside the membrane surrounding the endospore core. It consists of peptidoglycan of a different chemical nature than that found in vegetative cell walls which results in less cross-linking of peptidoglycan.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endospore external encapsulating structure","termid":"GO:0043591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"endospore cortex","termid":"GO:0043595"}


id: PBO:0029554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ethyl_methanesulfonate","termid":"PBO:0029554"}


id: GO:0044203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a host cell nucleus, composed of lamin filaments.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"},{"relation_name":"part_of","term_name":"host cell nuclear inner membrane","termid":"GO:0044201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear lamina","termid":"GO:0044203"}


id: PBO:0002983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine acetyltransferase (predicted)","termid":"PBO:0002983"}


id: GO:0043568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of insulin-like growth factor receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of insulin-like growth factor receptor signaling pathway","termid":"GO:0043567"},{"relation_name":"positively_regulates","term_name":"insulin-like growth factor receptor signaling pathway","termid":"GO:0048009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of insulin-like growth factor receptor signaling pathway","synonyms":[{"name":"activation of insulin-like growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of IGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of IGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of insulin-like growth factor receptor signalling pathway","type":"exact"},{"name":"stimulation of insulin-like growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of insulin-like growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0043568"}


id: PR:Q09776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snu23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6.U5 small nuclear ribonucleoprotein component snu23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.11c","synonyms":[{"name":"Spom972h-snu23","type":"exact"}],"termid":"PR:Q09776"}


id: PBO:0059747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 21","termid":"PBO:0059747"}


id: PR:O14094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein prune that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exopolyphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.11","secondary_identifiers":["UniProtKB:O14094"],"synonyms":[{"name":"ExopolyPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Metaphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PRUNE","type":"exact"}],"termid":"PR:O14094"}


id: PBO:0028226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alpha,alpha-trehalase_activity_during_cellular_response_to_heat","termid":"PBO:0028226"}


id: MONDO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloid neoplasm (obsolete MONDO:0000832)","termid":"MONDO:0000832","xrefs":{"Monarch":{"xref_id":"0000832"}}}


id: GO:0048139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a single follicular epithelium around the germ-line derived cells of a cyst formed in the female gonad.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line cyst encapsulation","termid":"GO:0048138"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line cyst encapsulation","termid":"GO:0048139"}


id: GO:0033930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-galactosidic linkages in keratan sulfate.","definition_xrefs":["EC:3.2.1.103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"keratan-sulfate endo-1,4-beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.103-RXN"],"synonyms":[{"name":"endo-beta-galactosidase activity","type":"broad"},{"name":"keratan sulfate endogalactosidase activity","type":"related"},{"name":"keratan-sulfate 1,4-beta-D-galactanohydrolase activity","type":"related"},{"name":"keratanase activity","type":"related"}],"termid":"GO:0033930"}


id: FYECO:0000289
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing galactose (typically <2% w/v), salts and water.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose MM","termid":"FYECO:0000289"}


id: PBO:0055133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2552","termid":"PBO:0055133"}


id: PBO:0056176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF1 pseudogene 1","termid":"PBO:0056176"}


id: GO:0007594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of the puparia of Diptera to their substrate; normally effected by a 'glue' secreted by the larval salivary gland and expectorated at the time of pupariation.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism adhesion to substrate","termid":"GO:0022609"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"puparial adhesion","synonyms":[{"name":"puparial glue","type":"related"}],"termid":"GO:0007594"}


id: PBO:0000654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM binding protein homolog Mcb1 (predicted)","termid":"PBO:0000654"}


id: PBO:0067696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 4","termid":"PBO:0067696"}


id: MONDO:0003417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ophthalmoplegia","termid":"MONDO:0003425"},{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internuclear ophthalmoplegia","secondary_identifiers":["ICD10CM:H51.2","ICD9:378.86","MEDGEN:101820","icd11.foundation:377040542","SCTID:49823009","DOID:538","UMLS:C0152134"],"termid":"MONDO:0003417","xrefs":{"Monarch":{"xref_id":"0003417"}}}


id: PBO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap155","termid":"PBO:0002474"}


id: GO:1904733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of electron transfer activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:25416781"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of electron transfer activity (obsolete GO:1904733)","synonyms":[{"name":"down regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"down regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"down regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"down regulation of amicyanin","type":"narrow"},{"name":"down regulation of azurin","type":"narrow"},{"name":"down regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"down regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"down regulation of copper electron carrier","type":"narrow"},{"name":"down regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"down regulation of electron acceptor activity","type":"narrow"},{"name":"down regulation of electron carrier activity","type":"exact"},{"name":"down regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"down regulation of electron donor activity","type":"narrow"},{"name":"down regulation of electron transfer flavoprotein","type":"narrow"},{"name":"down regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"down regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"down regulation of electron transporter activity","type":"exact"},{"name":"down regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"down regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"down regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"down regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"down regulation of polyferredoxin","type":"narrow"},{"name":"down regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"down regulation of rubredoxin","type":"narrow"},{"name":"down regulation of small blue copper electron carrier","type":"narrow"},{"name":"down regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"down-regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"down-regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"down-regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"down-regulation of amicyanin","type":"narrow"},{"name":"down-regulation of azurin","type":"narrow"},{"name":"down-regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"down-regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"down-regulation of copper electron carrier","type":"narrow"},{"name":"down-regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"down-regulation of electron acceptor activity","type":"narrow"},{"name":"down-regulation of electron carrier activity","type":"exact"},{"name":"down-regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"down-regulation of electron donor activity","type":"narrow"},{"name":"down-regulation of electron transfer flavoprotein","type":"narrow"},{"name":"down-regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"down-regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"down-regulation of electron transporter activity","type":"exact"},{"name":"down-regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"down-regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"down-regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"down-regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"down-regulation of polyferredoxin","type":"narrow"},{"name":"down-regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"down-regulation of rubredoxin","type":"narrow"},{"name":"down-regulation of small blue copper electron carrier","type":"narrow"},{"name":"down-regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"downregulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"downregulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"downregulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"downregulation of amicyanin","type":"narrow"},{"name":"downregulation of azurin","type":"narrow"},{"name":"downregulation of bacterial-type ferredoxin","type":"narrow"},{"name":"downregulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"downregulation of copper electron carrier","type":"narrow"},{"name":"downregulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"downregulation of electron acceptor activity","type":"narrow"},{"name":"downregulation of electron carrier activity","type":"exact"},{"name":"downregulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"downregulation of electron donor activity","type":"narrow"},{"name":"downregulation of electron transfer flavoprotein","type":"narrow"},{"name":"downregulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"downregulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"downregulation of electron transporter activity","type":"exact"},{"name":"downregulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"downregulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"downregulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"downregulation of mononuclear iron electron carrier","type":"narrow"},{"name":"downregulation of polyferredoxin","type":"narrow"},{"name":"downregulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"downregulation of rubredoxin","type":"narrow"},{"name":"downregulation of small blue copper electron carrier","type":"narrow"},{"name":"downregulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"inhibition of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"inhibition of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"inhibition of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"inhibition of amicyanin","type":"narrow"},{"name":"inhibition of azurin","type":"narrow"},{"name":"inhibition of bacterial-type ferredoxin","type":"narrow"},{"name":"inhibition of chloroplast-type ferredoxin","type":"narrow"},{"name":"inhibition of copper electron carrier","type":"narrow"},{"name":"inhibition of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"inhibition of electron acceptor activity","type":"narrow"},{"name":"inhibition of electron carrier activity","type":"narrow"},{"name":"inhibition of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"inhibition of electron donor activity","type":"narrow"},{"name":"inhibition of electron transfer flavoprotein","type":"narrow"},{"name":"inhibition of electron transfer flavoprotein, group I","type":"narrow"},{"name":"inhibition of electron transfer flavoprotein, group II","type":"narrow"},{"name":"inhibition of electron transporter activity","type":"narrow"},{"name":"inhibition of high-potential iron-sulfur carrier","type":"narrow"},{"name":"inhibition of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"inhibition of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"inhibition of mononuclear iron electron carrier","type":"narrow"},{"name":"inhibition of polyferredoxin","type":"narrow"},{"name":"inhibition of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"inhibition of rubredoxin","type":"narrow"},{"name":"inhibition of small blue copper electron carrier","type":"narrow"},{"name":"inhibition of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"negative regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"negative regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"negative regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"negative regulation of amicyanin","type":"narrow"},{"name":"negative regulation of azurin","type":"narrow"},{"name":"negative regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"negative regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"negative regulation of copper electron carrier","type":"narrow"},{"name":"negative regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"negative regulation of electron acceptor activity","type":"narrow"},{"name":"negative regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"negative regulation of electron donor activity","type":"narrow"},{"name":"negative regulation of electron transfer flavoprotein","type":"narrow"},{"name":"negative regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"negative regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"negative regulation of electron transporter activity","type":"exact"},{"name":"negative regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"negative regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"negative regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"negative regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"negative regulation of polyferredoxin","type":"narrow"},{"name":"negative regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"negative regulation of rubredoxin","type":"narrow"},{"name":"negative regulation of small blue copper electron carrier","type":"narrow"},{"name":"negative regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"}],"termid":"GO:1904733"}


id: GO:0061170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of hair follicle placode formation, the developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hair follicle development","termid":"GO:0051799"},{"relation_name":"is_a","term_name":"regulation of hair follicle placode formation","termid":"GO:0061168"},{"relation_name":"negatively_regulates","term_name":"hair follicle placode formation","termid":"GO:0060789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hair follicle placode formation","termid":"GO:0061170"}


id: PBO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.3","termid":"PBO:0001055"}


id: PBO:0050945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 17","termid":"PBO:0050945"}


id: PATO:0001210
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001210 plane_angle_quantity (obsolete PATO:0001210)","termid":"PATO:0001210"}


id: MONDO:0001359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kohler disease (obsolete MONDO:0001359)","termid":"MONDO:0001359","xrefs":{"Monarch":{"xref_id":"0001359"}}}


id: FYECO:0000371
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which dimethyl sulfoxide (DMSO) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ DMSO","synonyms":[{"name":"+ dimethyl sulfoxide","type":"exact"}],"termid":"FYECO:0000371"}


id: PATO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A thickness which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"thickness","termid":"PATO:0000915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased thickness","synonyms":[{"name":"low thickness","type":"exact"},{"name":"slender","type":"related"},{"name":"thin","type":"related"}],"termid":"PATO:0000592"}


id: MONDO:0006195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign nodular lesion protruding above the surface of the endometrium. It is composed of a fibrous stroma that contains thick-walled blood vessels and dilated endometrial glands. Polypectomy is the treatment of choice. Only few cases with recurrence have been reported.","definition_xrefs":["NCIT:C6433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"uterine polyp","termid":"MONDO:0004701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial polyp","secondary_identifiers":["UMLS:C1704273","EFO:1000237","MEDGEN:312370"],"synonyms":[{"name":"endometrial polyp","type":"exact"},{"name":"endometrial stromal polyp","type":"exact"},{"name":"endometrium polyp","type":"exact"},{"name":"polyp of endometrium","type":"exact"},{"name":"polyp of the endometrium","type":"exact"},{"name":"polyp, endometrial stromal, benign","type":"exact"}],"termid":"MONDO:0006195","xrefs":{"Monarch":{"xref_id":"0006195"}}}


id: PBO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetate transmembrane transporter (predicted)","termid":"PBO:0001009"}


id: GO:0031665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of lipopolysaccharide-mediated signaling pathway","termid":"GO:0031664"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"negatively_regulates","term_name":"lipopolysaccharide-mediated signaling pathway","termid":"GO:0031663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"down regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"down-regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"downregulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"inhibition of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of LPS-mediated signaling pathway","type":"exact"},{"name":"negative regulation of lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031665"}


id: MONDO:0018238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare bone disease related to a common gene or pathway defect (obsolete MONDO:0018238)","termid":"MONDO:0018238","xrefs":{"Monarch":{"xref_id":"0018238"}}}


id: PBO:0086981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the vacuolar transporter chaperone (VTC) complex; involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; VTC3 has a paralog, VTC2, that arose from the whole genome duplication","termid":"PBO:0086981"}


id: MONDO:0014684
data:
  {"annotated_genes":["SJAG_00255"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86937],"is_not":false,"summary":null,"term":"MONDO:0014684"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the TRMT5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00255":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 26","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616539","Orphanet:477684","UMLS:C5567741","GARD:17854","MEDGEN:1799164","DOID:0111490"],"synonyms":[{"name":"COXPD26","type":"exact"},{"name":"TRMT5 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 26","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in TRMT5","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 26","type":"exact"}],"termid":"MONDO:0014684","terms_by_termid":{"MONDO:0014684":null},"xrefs":{"Monarch":{"xref_id":"0014684"}}}


id: PBO:0072596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"round spermatid basic protein 1","termid":"PBO:0072596"}


id: MONDO:0018954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loeys-Dietz syndrome is a rare genetic connective tissue disorder characterized by a broad spectrum of craniofacial, vascular and skeletal manifestations with four genetic subtypes described forming a clinical continuum.","definition_xrefs":["Orphanet:60030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"Marfan and Marfan-related disorder","termid":"MONDO:0017310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Loeys-Dietz syndrome","secondary_identifiers":["DOID:0050466","ICD9:759.89","NORD:91173","NCIT:C75006","GARD:10788","NANDO:2200969","SCTID:446263001","OMIMPS:609192","MEDGEN:395827","MESH:D055947","UMLS:C2697932"],"synonyms":[{"name":"Loeys-Dietz syndrome","type":"exact"},{"name":"aortic aneurysm syndrome due to TGF-beta receptors anomalies","type":"exact"},{"name":"aortic aneurysm syndrome, Loeys-Dietz type","type":"related"}],"termid":"MONDO:0018954","xrefs":{"Monarch":{"xref_id":"0018954"}}}


id: GO:0007040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole organization","termid":"GO:0080171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysosome organization","synonyms":[{"name":"lysosome organisation","type":"exact"},{"name":"lysosome organization and biogenesis","type":"related"}],"termid":"GO:0007040"}


id: GO:0071261
data:
  {"annotated_genes":["SJAG_00959","SJAG_00064"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99942,110270],"is_not":false,"summary":null,"term":"GO:0071261"}]},"cv_name":"cellular_component","definition":"A translocon complex that contains a core heterotrimer of alpha, beta and gamma subunits, and may contain additional proteins (translocon-associated proteins or TRAPs); in budding yeast the core proteins are Ssh1p, Sbh2p, and Sss1p. The Ssh1 translocon complex is involved in the cotranslational pathway of protein transport across the ER membrane, and recognizes proteins bearing strongly hydrophobic signal sequences.","definition_xrefs":["GOC:mah","PMID:8612571","PMID:12134063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocon complex","termid":"GO:0071256"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0032991","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"Ssh1 translocon complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ssh1p-Sss1p-Sbh2p complex","type":"narrow"}],"termid":"GO:0071261","terms_by_termid":{"GO:0071261":null}}


id: MONDO:0011187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly type A","termid":"MONDO:0019673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type A2","secondary_identifiers":["GARD:18173","MESH:C566585","MEDGEN:356392","OMIM:602085","UMLS:C1865883"],"synonyms":[{"name":"PAPA2","type":"related"},{"name":"polydactyly, postaxial, type A2","type":"exact"},{"name":"postaxial polydactyly, type A2","type":"related"}],"termid":"MONDO:0011187","xrefs":{"Monarch":{"xref_id":"0011187"}}}


id: PR:O94696
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.12 gene.","definition_xrefs":["UniProtKB:O94696","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C83.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.12","synonyms":[{"name":"Spom972h-SPBC83.12","type":"exact"}],"termid":"PR:O94696"}


id: PBO:0117388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like domain 6, lysophospholipase","termid":"PBO:0117388"}


id: GO:0042170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a plastid and form the plastid envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"plastid envelope","termid":"GO:0009526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid membrane","termid":"GO:0042170"}


id: GO:0033756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Oplophorus luciferin + O2 = oxidized Oplophorus luciferin + CO2 + hnu.","definition_xrefs":["EC:1.13.12.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"Oplophorus-luciferin 2-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-3361","RHEA:20417"],"synonyms":[{"name":"Oplophorus luciferase activity","type":"related"},{"name":"Oplophorus-luciferin:oxygen 2-oxidoreductase (decarboxylating) activity","type":"related"}],"termid":"GO:0033756"}


id: PBO:0091623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA, hry1-antisense","termid":"PBO:0091623"}


id: PBO:0043658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q3, methyltransferase","termid":"PBO:0043658"}


id: PBO:0028930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_growing_cell_tip","termid":"PBO:0028930"}


id: PBO:0081308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 90 pseudogene 3","termid":"PBO:0081308"}


id: FYPO:0000041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize phenylalanine, and therefore requires phenylalanine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for phenylalanine","synonyms":[{"name":"growth auxotrophic for phenylalanine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for phenylalanine during vegetative growth","type":"exact"},{"name":"phenylalanine auxotrophy","type":"exact"}],"termid":"FYPO:0000041"}


id: PBO:0050846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICA1 antisense RNA 1","termid":"PBO:0050846"}


id: GO:0106157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: 2-oxoglutarate + [protein]-L-arginine + O2 = [protein]-(3R)-3-hydroxy-L-arginine + CO2 + succinate.","definition_xrefs":["PMID:29563586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"peptidyl-arginine 3-dioxygenase activity","secondary_identifiers":["EC:1.14.11.73","RHEA:56744","Reactome:R-HSA-9629888","Reactome:R-HSA-9629869","GO:0140554"],"synonyms":[{"name":"L-arginine 3-hydroxylase activity","type":"exact"}],"termid":"GO:0106157"}


id: GO:0098848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-ribose 1-methylphosphonate 5-phosphate = alpha-D-ribose 1,2-cyclic phosphate 5-phosphate + methane.","definition_xrefs":["GOC:ik","GOC:dos","EC:4.7.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon phosphorus lyase activity","termid":"GO:0018835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase activity","secondary_identifiers":["RHEA:34707"],"synonyms":[{"name":"alpha-D-ribose-1-methylphosphonate-5-phosphate C-P-lyase (methane forming)","type":"related"}],"termid":"GO:0098848"}


id: PR:Q8WZJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 35 member B1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10778:SF10","OMA:SCHPO02527","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transporter homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.11c","secondary_identifiers":["UniProtKB:Q8WZJ9"],"synonyms":[{"name":"Spom972h-SLC35B1","type":"exact"}],"termid":"PR:Q8WZJ9"}


id: MONDO:0007611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Zimmermann-Laband syndrome (obsolete MONDO:0007611)","termid":"MONDO:0007611","xrefs":{"Monarch":{"xref_id":"0007611"}}}


id: GO:0000708
data:
  {"annotated_genes":["SJAG_01410","SJAG_04950","SJAG_02267","SJAG_01708","SJAG_03221","SJAG_03751"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100956,109617,112277],"is_not":false,"summary":null,"term":"GO:0000708"},{"annotations":[80635,90318,102459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules. This occurs during meiosis.","definition_xrefs":["GOC:elh","PMID:10915877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand invasion","termid":"GO:0042148"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01410":null,"SJAG_01708":null,"SJAG_02267":null,"SJAG_03221":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"meiotic strand invasion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"meiotic D-loop biosynthesis","type":"related"},{"name":"meiotic D-loop formation","type":"related"},{"name":"meiotic displacement loop biosynthesis","type":"related"},{"name":"meiotic displacement loop formation","type":"related"}],"termid":"GO:0000708","terms_by_termid":{"GO:0000708":null,"GO:0010774":null}}


id: SO:0000073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when the five prime region overlaps with another gene's 3' region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_three_prime_overlap","synonyms":[{"name":"five prime-three prime overlap","type":"exact"}],"termid":"SO:0000073"}


id: GO:0007170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane receptor protein tyrosine kinase ligand binding (obsolete GO:0007170)","synonyms":[{"name":"transmembrane receptor protein tyrosine kinase ligand binding","type":"exact"}],"termid":"GO:0007170"}


id: GO:0170046
data:
  {"annotated_genes":["SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102149],"is_not":false,"summary":null,"term":"GO:0170046"}]},"cv_name":"biological_process","definition":"The process in which isopentenyl pyrophosphate is transported across a membrane into the mitochondrion.","definition_xrefs":["GOC:ew","PMID:37813972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"intracellular lipid transport","termid":"GO:0032365"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"isopentenyl pyrophosphate import into mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170046","terms_by_termid":{"GO:0170046":null}}


id: PBO:0047316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 1","termid":"PBO:0047316"}


id: FYPO:0004498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of DNA-directed DNA polymerase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal regulation of catalytic activity","termid":"FYPO:0004920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"normal positive regulation of DNA-directed DNA polymerase activity during mitotic cell cycle","type":"exact"},{"name":"normal positive regulation of DNA-directed DNA polymerase activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004498"}


id: PBO:0055493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2927","termid":"PBO:0055493"}


id: GO:0002768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell capable of activating, perpetuating, or inhibiting an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-regulating signaling pathway","termid":"GO:0002764"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"immune response-regulating cell surface receptor signaling pathway","synonyms":[{"name":"immune response-regulating cell surface receptor signalling pathway","type":"exact"}],"termid":"GO:0002768"}


id: MONDO:0100115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute onset of focal limb weakness that is associated mainly with gray matter abnormalities or CSF pleocytosis, but which is without an apparent cause.","definition_xrefs":["NCIT:C128379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelitis","termid":"MONDO:0002565"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute flaccid myelitis","secondary_identifiers":["DOID:0080947","Orphanet:623801","MEDGEN:927532","GARD:13142","UMLS:C4290000","MESH:C000629404"],"synonyms":[{"name":"AFM","type":"exact"}],"termid":"MONDO:0100115","xrefs":{"Monarch":{"xref_id":"0100115"}}}


id: GO:0070805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phialide development, a process that leads to the formation of phialides. Phialides are specialized cells that bud from the ends of metulae on the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"phialide development","termid":"GO:0070790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phialide development","termid":"GO:0070805"}


id: PBO:0082334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter; multidrug transporter involved in the pleiotropic drug resistance network; regulated by Pdr1p and Pdr3p","termid":"PBO:0082334"}


id: GO:1902925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(hydroxyalkanoate) from fatty acid.","definition_xrefs":["GO_REF:0000092","GOC:mengo_curators","PMID:21129764","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) biosynthetic process","termid":"GO:1901441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) biosynthetic process from fatty acid","synonyms":[{"name":"poly(hydroxyalkanoate) anabolism from fatty acid","type":"exact"},{"name":"poly(hydroxyalkanoate) biosynthesis from fatty acid","type":"exact"},{"name":"poly(hydroxyalkanoate) formation from fatty acid","type":"exact"},{"name":"poly(hydroxyalkanoate) synthesis from fatty acid","type":"exact"}],"termid":"GO:1902925"}


id: GO:0018922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prodione, a colorless, odorless crystal. It is used as a dicarboximide contact fungicide to control a wide variety of crop diseases by inhibiting the germination of spores and the growth of the fungal mat (mycelium).","definition_xrefs":["UM-BBD_pathwayID:ipd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iprodione metabolic process","synonyms":[{"name":"iprodione metabolism","type":"exact"}],"termid":"GO:0018922"}


id: GO:0030749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + loganate = S-adenosyl-L-homocysteine + loganin.","definition_xrefs":["EC:2.1.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"loganate O-methyltransferase activity","secondary_identifiers":["MetaCyc:LOGANATE-O-METHYLTRANSFERASE-RXN","RHEA:12508"],"synonyms":[{"name":"S-adenosyl-L-methionine:loganate 11-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:loganic acid methyltransferase activity","type":"related"},{"name":"loganate methyltransferase activity","type":"related"}],"termid":"GO:0030749"}


id: MOD:00708
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a sulfur atom of L-cysteine residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"sulfur oxygenated L-cysteine","synonyms":[{"name":"SOxyCys","type":"exact"}],"termid":"MOD:00708"}


id: PATO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being drawn together, compressed or squeezed physically.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constricted","secondary_identifiers":["PATO:0001837"],"synonyms":[{"name":"stenosis","type":"exact"},{"name":"stenotic","type":"exact"},{"name":"stricture","type":"exact"}],"termid":"PATO:0001847"}


id: GO:0097630
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the omegasome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mf","PMID:24591649","PMID:18725538"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of omegasome membrane (obsolete GO:0097630)","synonyms":[{"name":"intrinsic to omegasome membrane","type":"narrow"}],"termid":"GO:0097630"}


id: PBO:0044055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin SA","termid":"PBO:0044055"}


id: MONDO:0017495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital absence of upper arm and forearm with hand present, bilateral (obsolete MONDO:0017495)","secondary_identifiers":["ICD10CM:Q71.13","Orphanet:295087"],"synonyms":[{"name":"humero-radio-ulnar intercalary transverse meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017495","xrefs":{"Monarch":{"xref_id":"0017495"}}}


id: PBO:0003411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup131","termid":"PBO:0003411"}


id: PBO:0053345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 226","termid":"PBO:0053345"}


id: PBO:0087051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L24A; not essential for translation but may be required for normal translation rate; homologous to mammalian ribosomal protein L24, no bacterial homolog; RPL24A has a paralog, RPL24B, that arose from the whole genome duplication","termid":"PBO:0087051"}


id: PBO:0085779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the AP180 family, involved in clathrin cage assembly; binds Pan1p and clathrin; YAP1802 has a paralog, YAP1801, that arose from the whole genome duplication","termid":"PBO:0085779"}


id: GO:1904703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:bc","GOC:TermGenie","GO_REF:0000058","GOC:kmv","GOC:aruk","PMID:26412237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell-cell junction","termid":"GO:0150119"},{"relation_name":"is_a","term_name":"regulation of protein localization to adherens junction","termid":"GO:1904702"},{"relation_name":"negatively_regulates","term_name":"protein localization to adherens junction","termid":"GO:0071896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to adherens junction","synonyms":[{"name":"down regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"down regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"down regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"down regulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"down-regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"down-regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"down-regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"down-regulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"downregulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"downregulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"downregulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"downregulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"inhibition of protein localisation in cell-cell adherens junction","type":"narrow"},{"name":"inhibition of protein localisation to cell-cell adherens junction","type":"narrow"},{"name":"inhibition of protein localization in cell-cell adherens junction","type":"narrow"},{"name":"inhibition of protein localization to cell-cell adherens junction","type":"narrow"},{"name":"negative regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"negative regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"negative regulation of protein localization in cell-cell adherens junction","type":"exact"}],"termid":"GO:1904703"}


id: GO:0044522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, killing heart myocytes and ultimately resulting in muscle damage in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:21150580","PMID:10620318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"},{"relation_name":"is_a","term_name":"venom-mediated muscle damage in another organism","termid":"GO:0044521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated myocyte killing in another organism","synonyms":[{"name":"envenomation resulting in myocyte killing causing muscle damage in other organism","type":"exact"},{"name":"envenomation resulting in myocyte killing in another organism","type":"exact"},{"name":"envenomation resulting in myocyte killing in other organism","type":"exact"}],"termid":"GO:0044522"}


id: GO:0007477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal part of the body over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"wing disc development","termid":"GO:0035220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notum development","termid":"GO:0007477"}


id: GO:1900202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of spread of virus in host, cell to cell.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of spread of virus in host, cell to cell (obsolete GO:1900202)","synonyms":[{"name":"down regulation of cell to cell spread of virus within host","type":"exact"},{"name":"down regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"down regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"down regulation of viral spread within host, cell to cell","type":"exact"},{"name":"down-regulation of cell to cell spread of virus within host","type":"exact"},{"name":"down-regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"down-regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"down-regulation of viral spread within host, cell to cell","type":"exact"},{"name":"downregulation of cell to cell spread of virus within host","type":"exact"},{"name":"downregulation of spread of virus in host, cell to cell","type":"exact"},{"name":"downregulation of spread of virus within host, cell to cell","type":"exact"},{"name":"downregulation of viral spread within host, cell to cell","type":"exact"},{"name":"inhibition of cell to cell spread of virus within host","type":"exact"},{"name":"inhibition of spread of virus in host, cell to cell","type":"narrow"},{"name":"inhibition of spread of virus within host, cell to cell","type":"exact"},{"name":"inhibition of viral spread within host, cell to cell","type":"exact"},{"name":"negative regulation of cell to cell spread of virus within host","type":"exact"},{"name":"negative regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"negative regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"negative regulation of viral spread within host, cell to cell","type":"exact"}],"termid":"GO:1900202"}


id: FYPO:0003456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize methionine or purines, and therefore requires methionine and at least one purine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for methionine","termid":"FYPO:0000040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for methionine and purine","synonyms":[{"name":"growth auxotrophic for methionine and purine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for methionine and purine during vegetative growth","type":"exact"},{"name":"methionine and purine auxotrophy","type":"exact"}],"termid":"FYPO:0003456"}


id: PBO:0027119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_azygotic_meiosis_II","termid":"PBO:0027119"}


id: PBO:0013072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp38","termid":"PBO:0013072"}


id: GO:0140788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of a L-glutamate across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["PMID:27133463","PMID:29642010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transporter activity","termid":"GO:0005313"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-glutamate uniporter activity","synonyms":[{"name":"glutamate uniporter activity","type":"broad"}],"termid":"GO:0140788"}


id: GO:0000208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus during osmolarity sensing.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in osmosensory signaling pathway (obsolete GO:0000208)","synonyms":[{"name":"MAPK import into nucleus during osmolarity sensing","type":"exact"},{"name":"MAPK import into nucleus involved in osmosensory signalling pathway","type":"exact"},{"name":"nuclear translocation of MAPK during osmolarity sensing","type":"exact"},{"name":"nuclear translocation of MAPK involved in osmosensory signaling pathway","type":"narrow"},{"name":"nuclear translocation of MAPK involved in osmosensory signalling pathway","type":"narrow"},{"name":"osmolarity sensing, MAPK import into nucleus","type":"exact"},{"name":"osmolarity sensing, nuclear translocation of MAPK","type":"narrow"}],"termid":"GO:0000208"}


id: PBO:0048661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 3","termid":"PBO:0048661"}


id: MONDO:0016926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Geleophysic dysplasia (obsolete MONDO:0016926)","termid":"MONDO:0016926","xrefs":{"Monarch":{"xref_id":"0016926"}}}


id: PBO:0003751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family protein (predicted)","termid":"PBO:0003751"}


id: PBO:0027055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_microtubules","termid":"PBO:0027055"}


id: FYPO:0007331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing formaldehyde.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on formaldehyde","synonyms":[{"name":"normal cell population growth in presence of formaldehyde","type":"exact"},{"name":"normal cell population growth on formaldehyde","type":"exact"},{"name":"normal vegetative cell population growth on formaldehyde","type":"exact"}],"termid":"FYPO:0007331"}


id: GO:0060585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of prostaglandin-endoperoxide synthase activity (obsolete GO:0060585)","synonyms":[{"name":"positive regulation of (PG)H synthase activity","type":"related"},{"name":"positive regulation of PG synthetase activity","type":"related"},{"name":"positive regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"positive regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060585"}


id: PBO:0059834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission process 1","termid":"PBO:0059834"}


id: MONDO:0018686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of Creutzfeldt Jacob disease that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, bovine spongiform","termid":"MONDO:0025149"},{"relation_name":"is_a","term_name":"Creutzfeldt Jacob disease","termid":"MONDO:0005357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired Creutzfeldt-Jakob disease","secondary_identifiers":["MESH:C538481","Orphanet:454700","NANDO:1200192","GARD:17788","UMLS:C5681100","MEDGEN:1826177","MONDO:0025169"],"synonyms":[{"name":"acquired CJD","type":"exact"},{"name":"acquired Creutzfeldt Jacob disease","type":"exact"},{"name":"sporadic CJD","type":"related"}],"termid":"MONDO:0018686","xrefs":{"Monarch":{"xref_id":"0018686"}}}


id: GO:1902380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of endoribonuclease activity.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of endoribonuclease activity (obsolete GO:1902380)","synonyms":[{"name":"activation of endonuclease G activity","type":"related"},{"name":"activation of endoribonuclease activity","type":"narrow"},{"name":"positive regulation of endonuclease G activity","type":"related"},{"name":"up regulation of endonuclease G activity","type":"related"},{"name":"up regulation of endoribonuclease activity","type":"exact"},{"name":"up-regulation of endonuclease G activity","type":"related"},{"name":"up-regulation of endoribonuclease activity","type":"exact"},{"name":"upregulation of endonuclease G activity","type":"related"},{"name":"upregulation of endoribonuclease activity","type":"exact"}],"termid":"GO:1902380"}


id: GO:0061824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an axoneme is exposed entirely or partially to the cytoplasm or by which the cytoplasmic portion is assembled or extended. Cytosolic ciliogenesis can occur following compartmentalized ciliogenesis, in which the cilium is formed within a compartment separated from the cytoplasm.","definition_xrefs":["PMID:26654377","PMID:25447994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"cytosolic ciliogenesis","synonyms":[{"name":"intracellular ciliogenesis","type":"related"}],"termid":"GO:0061824"}


id: GO:0007402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a ganglion mother cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion mother cell fate determination","termid":"GO:0007402"}


id: PBO:0015260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC ubiquitin E3 ligase complex specificiy factor Raf1/Dos1","termid":"PBO:0015260"}


id: PBO:0059844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like","termid":"PBO:0059844"}


id: PBO:0048333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 44","termid":"PBO:0048333"}


id: PBO:0068854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 92, pseudogene","termid":"PBO:0068854"}


id: MONDO:0012969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microvascular complications of diabetes, susceptibility in which the cause of the disease is a mutation in the PON1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvascular complications of diabetes, susceptibility","termid":"MONDO:0000065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvascular complications of diabetes, susceptibility to, 5","secondary_identifiers":["OMIM:612633","MEDGEN:436225","UMLS:C2674665"],"synonyms":[{"name":"MVCD5","type":"related"},{"name":"PON1 microvascular complications of diabetes, susceptibility","type":"exact"},{"name":"microvascular complications of diabetes 5","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility caused by mutation in PON1","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to, 5","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to, type 5","type":"exact"},{"name":"retinopathy, diabetic, susceptibility to","type":"related"}],"termid":"MONDO:0012969","xrefs":{"Monarch":{"xref_id":"0012969"}}}


id: PBO:0073007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 7","termid":"PBO:0073007"}


id: MONDO:0958097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary superior vena cava aneurysm","secondary_identifiers":["UMLS:C5925121","Orphanet:652668","MEDGEN:1863724"],"termid":"MONDO:0958097","xrefs":{"Monarch":{"xref_id":"0958097"}}}


id: PBO:0108568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo-type fold protein, zf-MYND type zinc finger protein, Mub1-Rad6-Ubr2 ubiquitin ligase complex Mub1","termid":"PBO:0108568"}


id: PBO:0077072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte nuclear protein 1","termid":"PBO:0077072"}


id: PBO:0068254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 1","termid":"PBO:0068254"}


id: PBO:0027484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_hydrogen_peroxide-induced_proteins_during_G0","termid":"PBO:0027484"}


id: MONDO:1010537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megacolon that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megacolon, non-human animal","termid":"MONDO:1010039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megacolon, pig","secondary_identifiers":["OMIA:000629-9823"],"termid":"MONDO:1010537","xrefs":{"Monarch":{"xref_id":"1010537"}}}


id: MONDO:0035586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cramp-fasciculation syndrome","secondary_identifiers":["UMLS:C0751381","ICD10CM:G90.8","MEDGEN:148299","Orphanet:581271","GARD:6205"],"termid":"MONDO:0035586","xrefs":{"Monarch":{"xref_id":"0035586"}}}


id: PBO:0070796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 26","termid":"PBO:0070796"}


id: PBO:0042212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin K","termid":"PBO:0042212"}


id: PBO:0069414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 675, pseudogene","termid":"PBO:0069414"}


id: MONDO:0003242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fibrolamellar carcinoma (obsolete MONDO:0003242)","termid":"MONDO:0003242","xrefs":{"Monarch":{"xref_id":"0003242"}}}


id: MONDO:0007197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder diverticulum","secondary_identifiers":["MEDGEN:57625","DOID:11353","HP:0000015","OMIM:109820","MESH:C562406","ICD10CM:N32.3","SCTID:197866008","UMLS:C0156273","ICD9:596.3","NCIT:C160155"],"synonyms":[{"name":"bladder diverticulum","type":"exact"},{"name":"bladder diverticulum (disease)","type":"exact"},{"name":"diverticulum - bladder","type":"exact"},{"name":"diverticulum of bladder","type":"exact"}],"termid":"MONDO:0007197","xrefs":{"Monarch":{"xref_id":"0007197"}}}


id: SO:0001543
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that affects the post transcriptional processing of a transcript with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_function_variant","termid":"SO:0001538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_processing_variant","synonyms":[{"name":"transcript processing variant","type":"exact"}],"termid":"SO:0001543"}


id: PBO:0076599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 21","termid":"PBO:0076599"}


id: FYPO:0002554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a region of a chromosome at which a DNA double-strand break has occurred is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to double-strand break site","synonyms":[{"name":"normal protein localisation to double-strand break site","type":"exact"},{"name":"normal protein localization to DSB","type":"exact"},{"name":"normal protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"normal protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"normal protein localization to site of DSB","type":"exact"},{"name":"normal protein localization to site of double-strand break","type":"exact"}],"termid":"FYPO:0002554"}


id: GO:0015807
data:
  {"annotated_genes":["SJAG_03970","SJAG_00991","SJAG_03591","SJAG_00543","SJAG_00522","SJAG_04588","SJAG_03256","SJAG_02029","SJAG_02605","SJAG_04637","SJAG_03899","SJAG_05346","SJAG_02716","SJAG_04725","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902475"},{"annotations":[102266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[99245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[105753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[100719,64322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[98452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[105755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[98453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"},{"annotations":[99246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[105756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[102267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[99247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[109861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160256"},{"annotations":[105757,111999,104723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[105758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[66768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015825"},{"annotations":[105759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[109862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[89920],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[100774,95191,93601,112515],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[93602,100775,95192],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[95193],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[64321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015828"}]},"cv_name":"biological_process","definition":"The directed movement of L-enantiomer amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00543":null,"SJAG_00991":null,"SJAG_02029":null,"SJAG_02605":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03591":null,"SJAG_03899":null,"SJAG_03970":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04725":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015807","terms_by_termid":{"GO:0015813":null,"GO:0015825":null,"GO:0015828":null,"GO:0070778":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0097638":null,"GO:0097639":null,"GO:0160256":null,"GO:1902475":null,"GO:1903826":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1990575":null,"GO:1990818":null}}


id: PBO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bet1 (predicted)","termid":"PBO:0000747"}


id: GO:0039719
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic viral factory derived from the Golgi in which Bunyaviridae replication takes place. Tubes are membranous structures close to the assembly and budding sites, and their function may be to connect viral replication and morphogenesis inside viral factories.","definition_xrefs":["VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tube viral factory","termid":"GO:0039719"}


id: MONDO:0007160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Stickler syndrome","termid":"MONDO:0019354"},{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"},{"relation_name":"is_a","term_name":"COL2A1-related spondyloepiphyseal dysplasia","termid":"MONDO:0100602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005328"],"is_obsolete":false,"name":"Stickler syndrome type 1","secondary_identifiers":["UMLS:C2020284","GARD:5018","Orphanet:90653","MESH:C537492","MEDGEN:810955","NANDO:2201354","DOID:0080676","icd11.foundation:203625278","NCIT:C168733","OMIM:108300"],"synonyms":[{"name":"STL1","type":"related"},{"name":"Stickler syndrome type 1","type":"exact"},{"name":"Stickler syndrome, membranous vitreous type","type":"related"},{"name":"Stickler syndrome, type 1","type":"related"},{"name":"Stickler syndrome, type I","type":"related"},{"name":"Stickler syndrome, vitreous type 1","type":"related"},{"name":"arthroophthalmopathy, hereditary progressive","type":"related"}],"termid":"MONDO:0007160","xrefs":{"Monarch":{"xref_id":"0007160"}}}


id: GO:0016340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules that require the presence of calcium for the interaction.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"calcium-dependent cell-matrix adhesion","termid":"GO:0016340"}


id: GO:0005625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete soluble fraction (obsolete GO:0005625)","synonyms":[{"name":"soluble","type":"broad"},{"name":"soluble fraction","type":"exact"}],"termid":"GO:0005625"}


id: SO:0002192
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat lying outside the sequence for which it has functional significance (eg. transposon insertion target sites).","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanking_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:flanking","type":"exact"},{"name":"flanking repeat","type":"exact"}],"termid":"SO:0002192"}


id: GO:0052620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + thymine + acceptor = 5-methyl-barbiturate + donor-H2.","definition_xrefs":["RHEA:13469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"thymine dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-8646"],"termid":"GO:0052620"}


id: GO:0055097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of high density lipoprotein particle.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle mediated signaling","termid":"GO:0055095"},{"relation_name":"part_of","term_name":"cellular response to high density lipoprotein particle stimulus","termid":"GO:0071403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"high density lipoprotein particle mediated signaling","synonyms":[{"name":"high density lipoprotein mediated signalling","type":"exact"},{"name":"high density lipoprotein particle mediated signal transduction","type":"exact"},{"name":"high density lipoprotein particle-mediated signaling","type":"exact"}],"termid":"GO:0055097"}


id: PBO:0058013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3939","termid":"PBO:0058013"}


id: PBO:0055776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loss of heterozygosity on chromosome 12, region 2","termid":"PBO:0055776"}


id: MONDO:0013424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 3p is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the short arm of chromosome 3, with a highly variable phenotype typically characterized by pre- and post-natal growth retardation, intellectual disability, developmental delay and craniofacial dysmorphism (microcephaly, trigonocephaly, downslanting palpebral fissures, telecanthus, ptosis, micrognathia). Postaxial polydactyly, hypotonia, renal anomalies and congenital heart defects (e.g. atrioventricular septal defect) may be associated.","definition_xrefs":["Orphanet:1620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 3","termid":"MONDO:0016885"},{"relation_name":"is_a","term_name":"blepharophimosis - intellectual disability syndrome","termid":"MONDO:0017393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3p- syndrome","secondary_identifiers":["OMIM:613792","MEDGEN:1643555","DOID:0060417","UMLS:C4706503","GARD:3750","SCTID:763528002","NORD:951","NCIT:C41377","MESH:C536804"],"synonyms":[{"name":"3p deletion","type":"related"},{"name":"3p monosomy","type":"related"},{"name":"3p- syndrome","type":"exact"},{"name":"Chromosome 3, Monosomy 3p","type":"exact"},{"name":"Del(3p) syndrome","type":"related"},{"name":"chromosome 3, monosomy 3p25","type":"related"},{"name":"chromosome 3p deletion","type":"related"},{"name":"chromosome 3p- syndrome","type":"related"},{"name":"chromosome 3pter-p25 deletion syndrome","type":"exact"},{"name":"del(3p25)","type":"related"},{"name":"deletion 3p","type":"related"},{"name":"deletion 3p25","type":"related"},{"name":"distal 3p deletion","type":"exact"},{"name":"distal monosomy 3p","type":"exact"},{"name":"distal monosomy type 3p","type":"exact"},{"name":"monosomy 3p","type":"related"},{"name":"monosomy 3pter","type":"exact"},{"name":"partial monosomy 3p","type":"related"},{"name":"telomeric monosomy 3p","type":"exact"}],"termid":"MONDO:0013424","xrefs":{"Monarch":{"xref_id":"0013424"}}}


id: PBO:0055885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit C","termid":"PBO:0055885"}


id: GO:0022894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 20 to 85 picoSiemens that opens in response to stimulus by internal calcium ions. Intermediate conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:mtg_transport","OMIM:602754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"intermediate conductance calcium-activated potassium channel activity","synonyms":[{"name":"IK KCa channels","type":"exact"},{"name":"IK calcium-activated potassium channel activity","type":"exact"},{"name":"intermediate conductance KCa channels","type":"exact"}],"termid":"GO:0022894"}


id: MOD:01032
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a benzyloxymethyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzyloxymethyl modified residue","synonyms":[{"name":"Bom","type":"exact"}],"termid":"MOD:01032"}


id: MONDO:0015742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Periventricular leukomalacia (PVL) is a brain injury disorder characterized by the death of the white matter of the brain due to softening of the brain tissue. It can affect fetuses or newborns, and premature babies are at the greatest risk of the disorder. PVL is caused by a lack of oxygen or blood flow to thearea around the ventricles of the brain, which results in the death of brain tissue. Although babies with PVL generally have no apparent signs or symptoms of the disorder at delivery, they are at risk for motor disorders, cerebral palsy, delayed mental development, coordination problems, and vision and hearing impairments. There is no cure for PVL. Treatment is generally supportive. Prognosis is dependent on the extent of damage to the ventricles.","direct_ancestors":[{"relation_name":"is_a","term_name":"encephalomalacia","termid":"MONDO:0006741"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periventricular leukomalacia","secondary_identifiers":["EFO:1001101","Orphanet:171676","DOID:13088","ICD9:742.8","MedDRA:10052594","SCTID:230769007","UMLS:C0023529","ICD9:779.7","MEDGEN:6072","NCIT:C99013","MESH:D007969"],"synonyms":[{"name":"PVL","type":"related"}],"termid":"MONDO:0015742","xrefs":{"Monarch":{"xref_id":"0015742"}}}


id: MONDO:0021681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Disease due to or propagated by sexual contact.","definition_xrefs":["MESH:D012749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexually transmitted disease","secondary_identifiers":["NCIT:C3365","SCTID:8098009","ICD10CM:A50-A64","ICD9:099.9","UMLS:C0036916","MEDGEN:11402","ICD9:099.8"],"synonyms":[{"name":"STD","type":"exact"},{"name":"STDs","type":"related"},{"name":"STI","type":"related"},{"name":"STIs","type":"related"},{"name":"Transmitted infection, sexually","type":"related"},{"name":"Transmitted infections, sexually","type":"related"},{"name":"VD","type":"exact"},{"name":"VD, venereal disease","type":"exact"},{"name":"disease (VD), venereal","type":"exact"},{"name":"disease, sexually Transmitted","type":"related"},{"name":"disease, venereal","type":"related"},{"name":"diseases, sexually Transmitted","type":"related"},{"name":"diseases, venereal","type":"related"},{"name":"infection, sexually Transmitted","type":"related"},{"name":"infections, sexually Transmitted","type":"related"},{"name":"sexually Transmitted disorder","type":"exact"},{"name":"sexually Transmitted infection","type":"related"},{"name":"sexually Transmitted infections","type":"related"},{"name":"sexually transmitted disease","type":"exact"},{"name":"venereal disease","type":"related"},{"name":"venereal disease (VD)","type":"exact"},{"name":"venereal diseases","type":"related"}],"termid":"MONDO:0021681","xrefs":{"Monarch":{"xref_id":"0021681"}}}


id: MONDO:0958119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare central nervous system embryonal tumor characterized by embryonal cells arranged in multilayered rosettes and displaying one of three morphological patterns: embryonal tumor with abundant neuropil and true rosettes, ependymoblastoma, or medulloepithelioma. The tumors typically have a C19MC alteration or (rarely) a DICER1 mutation and correspond to WHO grade IV. They are mostly localized intracranially, rarely in the spinal cord, and commonly cause signs and symptoms of elevated intracranial pressure, sometimes seizures and focal neurological signs. Most cases occur in children during the first two years of life.","definition_xrefs":["Orphanet:656417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"embryonal tumor with multilayered rosettes","secondary_identifiers":["MEDGEN:1804732","NCIT:C186534","GARD:6352","UMLS:C5575350"],"termid":"MONDO:0958119","xrefs":{"Monarch":{"xref_id":"0958119"}}}


id: PBO:0088048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin C-terminal hydrolase; cleaves ubiquitin-protein fusions to generate monomeric ubiquitin; hydrolyzes the peptide bond at the C-terminus of ubiquitin; also the major processing enzyme for the ubiquitin-like protein Rub1p","termid":"PBO:0088048"}


id: MONDO:0008923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive palmoplantar hyperkeratosis and congenital alopecia (PPK-CA) is a rare genetic skin disorder characterized by congenital alopecia and palmoplantar hyperkeratosis. It is usually associated with cataracts, progressive sclerodactyly and pseudo-ainhum.","definition_xrefs":["Orphanet:1366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"autosomal recessive palmoplantar keratoderma and congenital alopecia","secondary_identifiers":["MEDGEN:347851","UMLS:C1859316","GARD:1139","DOID:0111245","icd11.foundation:1733151457","MESH:C535336","OMIM:212360"],"synonyms":[{"name":"PPK-CA, Wallis type","type":"exact"},{"name":"PPKCA2","type":"related"},{"name":"Ppkca, Wallis type","type":"related"},{"name":"autosomal recessive palmoplantar hyperkeratosis and congenital alopecia","type":"exact"},{"name":"cass","type":"related"},{"name":"cataract, alopecia, sclerodactyly","type":"related"},{"name":"cataract, alopecia, sclerodactyly syndrome","type":"related"},{"name":"cataract-alopecia-sclerodactyly syndrome","type":"exact"},{"name":"palmoplantar keratoderma and congenital alopecia 2","type":"related"},{"name":"palmoplantar keratoderma and congenital alopecia type 2","type":"exact"},{"name":"palmoplantar keratoderma and congenital alopecia, Wallis type","type":"exact"}],"termid":"MONDO:0008923","xrefs":{"Monarch":{"xref_id":"0008923"}}}


id: PBO:0111773
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DNL","termid":"PBO:0111773"}


id: PBO:0054185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1560","termid":"PBO:0054185"}


id: PR:Q9P7V3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10741:SF2","PRO:DNx","OMA:SCHPO01818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.03c","secondary_identifiers":["UniProtKB:Q9P7V3"],"synonyms":[{"name":"Spom972h-TSN","type":"exact"},{"name":"meiotically up-regulated gene 90 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translin homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7V3"}


id: SO:1000010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A substitution of a pyrimidine, C or T, for another pyrimidine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition","termid":"SO:1000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine_transition","synonyms":[{"name":"pyrimidine transition","type":"exact"}],"termid":"SO:1000010"}


id: PBO:0044686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDN and PRKAG1 antisense RNA 1","termid":"PBO:0044686"}


id: GO:1990043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the endonucleolytic cleavage immediately 5' to pyrimidine dimers to products with 5'-phosphate.","definition_xrefs":["PMID:9708997","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete 5' deoxyribonuclease (pyrimidine dimer) activity (obsolete GO:1990043)","termid":"GO:1990043"}


id: PBO:0078471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-9","termid":"PBO:0078471"}


id: PBO:0027890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_attachment_of_mitotic_spindle_microtubules_to_kinetochore","termid":"PBO:0027890"}


id: MONDO:0004399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epithelial malignant thymoma (obsolete MONDO:0004399)","termid":"MONDO:0004399","xrefs":{"Monarch":{"xref_id":"0004399"}}}


id: GO:0030075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thylakoid that is derived from and attached to, but not necessarily continuous with, the plasma membrane, and is not enclosed in a plastid. It bears the photosynthetic pigments in photosynthetic cyanobacteria.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid","termid":"GO:0009579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial thylakoid","synonyms":[{"name":"plasma membrane-derived thylakoid","type":"exact"}],"termid":"GO:0030075"}


id: MONDO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"belinostat toxicity or dose selection","secondary_identifiers":["Orphanet:574671"],"termid":"MONDO:0035876","xrefs":{"Monarch":{"xref_id":"0035876"}}}


id: GO:1904853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an ascospore wall.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spore cell wall","termid":"GO:0099614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to ascospore wall","synonyms":[{"name":"protein localisation in ascospore wall","type":"exact"},{"name":"protein localisation to ascospore wall","type":"exact"},{"name":"protein localization in ascospore wall","type":"exact"}],"termid":"GO:1904853"}


id: GO:1900092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of raffinose biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22307851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of raffinose biosynthetic process","termid":"GO:1900091"},{"relation_name":"negatively_regulates","term_name":"raffinose biosynthetic process","termid":"GO:0033529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of raffinose biosynthetic process","synonyms":[{"name":"down regulation of raffinose anabolism","type":"exact"},{"name":"down regulation of raffinose biosynthesis","type":"exact"},{"name":"down regulation of raffinose biosynthetic process","type":"exact"},{"name":"down regulation of raffinose formation","type":"exact"},{"name":"down regulation of raffinose synthesis","type":"exact"},{"name":"down-regulation of raffinose anabolism","type":"exact"},{"name":"down-regulation of raffinose biosynthesis","type":"exact"},{"name":"down-regulation of raffinose biosynthetic process","type":"exact"},{"name":"down-regulation of raffinose formation","type":"exact"},{"name":"down-regulation of raffinose synthesis","type":"exact"},{"name":"downregulation of raffinose anabolism","type":"exact"},{"name":"downregulation of raffinose biosynthesis","type":"exact"},{"name":"downregulation of raffinose biosynthetic process","type":"exact"},{"name":"downregulation of raffinose formation","type":"exact"},{"name":"downregulation of raffinose synthesis","type":"exact"},{"name":"inhibition of raffinose anabolism","type":"exact"},{"name":"inhibition of raffinose biosynthesis","type":"exact"},{"name":"inhibition of raffinose biosynthetic process","type":"narrow"},{"name":"inhibition of raffinose formation","type":"exact"},{"name":"inhibition of raffinose synthesis","type":"exact"},{"name":"negative regulation of raffinose anabolism","type":"exact"},{"name":"negative regulation of raffinose biosynthesis","type":"exact"},{"name":"negative regulation of raffinose formation","type":"exact"},{"name":"negative regulation of raffinose synthesis","type":"exact"}],"termid":"GO:1900092"}


id: MONDO:0010569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked complicated corpus callosum dysgenesis is a historical term used to describe a phenotype now considered to be part of the L1 clinical spectrum (L1 syndrome). The disorder is characterized by variable spastic paraplegia, mild to moderate intellectual deficit, and dysplasia, hypoplasia or aplasia of the corpus callosum.","definition_xrefs":["Orphanet:1497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"L1 syndrome","termid":"MONDO:0017140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked complicated corpus callosum dysgenesis","secondary_identifiers":["OMIM:304100","UMLS:C1839909","MEDGEN:374339","GARD:12526","MESH:C564115","icd11.foundation:1765391162"],"synonyms":[{"name":"X-linked complicated corpus callosum agenesis","type":"related"},{"name":"X-linked partial agenesis of corpus callosum","type":"related"},{"name":"X-linked partial corpus callosum agenesis","type":"related"},{"name":"corpus callosum, partial agenesis of, X-linked","type":"related"},{"name":"corpus callosum, partial agenesis of, X-linked recessive","type":"exact"}],"termid":"MONDO:0010569","xrefs":{"Monarch":{"xref_id":"0010569"}}}


id: SO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A dinucleotide repeat region composed of GT repeating elements.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide_repeat_microsatellite_feature","termid":"SO:0000290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GT_dinucleotide_repeat","synonyms":[{"name":"d(GT)n","type":"exact"}],"termid":"SO:0001862"}


id: PBO:0048702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucagon like peptide 1 receptor","termid":"PBO:0048702"}


id: GO:0010313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phytochrome.","definition_xrefs":["PMID:15486102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phytochrome binding","termid":"GO:0010313"}


id: GO:0090103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cochlea is generated and organized.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"cochlea development","termid":"GO:0090102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cochlea morphogenesis","termid":"GO:0090103"}


id: MONDO:0024317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of disorder involving pain.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic pain syndrome","secondary_identifiers":["MEDGEN:720585","UMLS:C1298685","ICD10CM:G89.4","SCTID:373621006","ICD9:338.4"],"synonyms":[{"name":"chronic disorder involving pain","type":"exact"},{"name":"chronic pain disease","type":"exact"},{"name":"disorder involving pain, chronic","type":"exact"}],"termid":"MONDO:0024317","xrefs":{"Monarch":{"xref_id":"0024317"}}}


id: PBO:0055981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 4","termid":"PBO:0055981"}


id: MONDO:0017840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The simple virilizing form of classical congenital adrenal hyperplasia due to 21-hydroxylase deficiency (classical 21 OHD CAH) is characterized by genital ambiguity and virilization of the external genitalia in females, hypocortisolism and precocious pseudopuberty without salt-wasting.","definition_xrefs":["Orphanet:315311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic congenital adrenal hyperplasia due to 21-hydroxylase deficiency","termid":"MONDO:0008728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"classic congenital adrenal hyperplasia due to 21-hydroxylase deficiency, simple virilizing form","secondary_identifiers":["MEDGEN:1826061","UMLS:C5679895","GARD:21399"],"synonyms":[{"name":"classic 21-OHD CAH, simple virilizing form","type":"exact"}],"termid":"MONDO:0017840","xrefs":{"Monarch":{"xref_id":"0017840"}}}


id: PBO:0054865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2279","termid":"PBO:0054865"}


id: FYPO:0003397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the 35S rRNA primary transcript measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rRNA precursor level","termid":"FYPO:0003601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased 35S rRNA precursor level","synonyms":[{"name":"decreased 35S rRNA precursor accumulation","type":"related"},{"name":"decreased 35S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"decreased 35S rRNA precursor level during vegetative growth","type":"exact"},{"name":"decreased 35S rRNA precursor transcript level","type":"exact"},{"name":"decreased 35S rRNA primary transcript level","type":"exact"},{"name":"reduced 35S rRNA precursor level","type":"exact"}],"termid":"FYPO:0003397"}


id: MONDO:0009166
data:
  {"annotated_genes":["SJAG_00754"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87386],"is_not":false,"summary":null,"term":"MONDO:0009166"}]},"cv_name":"mondo","definition":"Pontocerebellar hypoplasia type 4 (PCH4) is a very rare form of PCH, characterized by prenatal onset of polyhydramnios and contractures followed by hypertonia, severe clonus, primary hypoventilation leading to an early postnatal death.","definition_xrefs":["Orphanet:166063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1856974","MESH:C536716","DOID:0060273","GARD:343","OMIM:225753","icd11.foundation:447667859","MEDGEN:384027","SCTID:718608006"],"synonyms":[{"name":"PCH4","type":"exact"},{"name":"encephalopathy fatal infantile with olivopontocerebellar hypoplasia","type":"related"},{"name":"encephalopathy, fatal infantile, with olivopontocerebellar Hypoplasia","type":"related"},{"name":"fatal infantile encephalopathy with olivopontocerebellar hypoplasia","type":"exact"},{"name":"olivopontocerebellar hypoplasia","type":"exact"},{"name":"pontocerebellar hypoplasia, type 4","type":"related"}],"termid":"MONDO:0009166","terms_by_termid":{"MONDO:0009166":null},"xrefs":{"Monarch":{"xref_id":"0009166"}}}


id: PBO:0053520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 513","termid":"PBO:0053520"}


id: MOD:01657
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 4-(4-dimethylaminophenylazo)benzenesulfonyl chloride, dabsyl chloride, to form N6-Dabsyl-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"Dabsyl chloride derivatized residue","termid":"MOD:01656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-Dabsyl derivatized lysine","synonyms":[{"name":"N6-[4-([4-(dimethylamino)phenyl]diazenyl)benzenesulfonyl]lysine","type":"exact"},{"name":"N6DabsylLys","type":"exact"}],"termid":"MOD:01657"}


id: GO:0047568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxo-5-beta-steroid + acceptor = a 3-oxo-D4-steroid + reduced acceptor.","definition_xrefs":["EC:1.3.99.6","MetaCyc:3-OXO-5-BETA-STEROID-4-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-CH group of donors","termid":"GO:0033765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-oxo-5-beta-steroid 4-dehydrogenase activity","secondary_identifiers":["RHEA:24172"],"synonyms":[{"name":"3-oxo-5beta-steroid 4-dehydrogenase activity","type":"related"},{"name":"3-oxo-5beta-steroid:(acceptor) delta4-oxidoreductase activity","type":"related"},{"name":"3-oxo-5beta-steroid:acceptor delta4-oxidoreductase activity","type":"related"},{"name":"delta4-3-ketosteroid 5-beta-reductase activity","type":"related"}],"termid":"GO:0047568"}


id: GO:0052784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of reuteran, a soluble glucan polymer with mainly alpha-(1->4) glycosidic linkages and significant amounts of alpha-(1->6) and alpha-(1->4,6) glucosidic linkages.","definition_xrefs":["PMID:15256553","PMID:16000808","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"},{"relation_name":"is_a","term_name":"reuteran metabolic process","termid":"GO:0052783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"reuteran biosynthetic process","synonyms":[{"name":"reuteransucrase-mediated reuteran biosynthesis","type":"narrow"}],"termid":"GO:0052784"}


id: MONDO:0019398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rigid spine muscular dystrophy 1","termid":"MONDO:0011271"},{"relation_name":"is_a","term_name":"hereditary inclusion-body myopathy","termid":"MONDO:0016112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"desmin-related myopathy with Mallory body-like inclusions","secondary_identifiers":["icd11.foundation:998522839","UMLS:C4275073","MEDGEN:898925","Orphanet:84132","GARD:16732"],"synonyms":[{"name":"early-onset desmin-related myopathy","type":"exact"}],"termid":"MONDO:0019398","xrefs":{"Monarch":{"xref_id":"0019398"}}}


id: SO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mRNA with a minus 2 frameshift.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"minus_2_frameshift","termid":"SO:0000867"},{"relation_name":"is_a","term_name":"mRNA_with_frameshift","termid":"SO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_minus_2_frameshift","synonyms":[{"name":"mRNA with minus 2 frameshift","type":"exact"}],"termid":"SO:0000335"}


id: FYPO:0000626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initiation of premeiotic DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication initiation","termid":"FYPO:0000176"},{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal initiation of premeiotic DNA replication","synonyms":[{"name":"abnormal initiation of meiotic DNA synthesis","type":"related"},{"name":"abnormal initiation of premeiotic DNA synthesis","type":"related"},{"name":"abnormal meiotic DNA replication initiation","type":"related"},{"name":"abnormal premeiotic DNA replication initiation","type":"exact"}],"termid":"FYPO:0000626"}


id: MONDO:1012430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"necrosis of digits, non-human animal","termid":"MONDO:1011770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrosis of digits, dog","secondary_identifiers":["OMIA:001665-9615"],"termid":"MONDO:1012430","xrefs":{"Monarch":{"xref_id":"1012430"}}}


id: GO:1901319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trehalose catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of trehalose metabolic process","termid":"GO:0090062"},{"relation_name":"positively_regulates","term_name":"trehalose catabolic process","termid":"GO:0005993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of trehalose catabolic process","synonyms":[{"name":"activation of mycose catabolic process","type":"exact"},{"name":"activation of mycose catabolism","type":"exact"},{"name":"activation of mykose catabolic process","type":"exact"},{"name":"activation of mykose catabolism","type":"exact"},{"name":"activation of trehalose breakdown","type":"exact"},{"name":"activation of trehalose catabolic process","type":"narrow"},{"name":"activation of trehalose catabolism","type":"exact"},{"name":"activation of trehalose degradation","type":"exact"},{"name":"positive regulation of mycose catabolic process","type":"exact"},{"name":"positive regulation of mycose catabolism","type":"exact"},{"name":"positive regulation of mykose catabolic process","type":"exact"},{"name":"positive regulation of mykose catabolism","type":"exact"},{"name":"positive regulation of trehalose breakdown","type":"exact"},{"name":"positive regulation of trehalose catabolism","type":"exact"},{"name":"positive regulation of trehalose degradation","type":"exact"},{"name":"up regulation of mycose catabolic process","type":"exact"},{"name":"up regulation of mycose catabolism","type":"exact"},{"name":"up regulation of mykose catabolic process","type":"exact"},{"name":"up regulation of mykose catabolism","type":"exact"},{"name":"up regulation of trehalose breakdown","type":"exact"},{"name":"up regulation of trehalose catabolic process","type":"exact"},{"name":"up regulation of trehalose catabolism","type":"exact"},{"name":"up regulation of trehalose degradation","type":"exact"},{"name":"up-regulation of mycose catabolic process","type":"exact"},{"name":"up-regulation of mycose catabolism","type":"exact"},{"name":"up-regulation of mykose catabolic process","type":"exact"},{"name":"up-regulation of mykose catabolism","type":"exact"},{"name":"up-regulation of trehalose breakdown","type":"exact"},{"name":"up-regulation of trehalose catabolic process","type":"exact"},{"name":"up-regulation of trehalose catabolism","type":"exact"},{"name":"up-regulation of trehalose degradation","type":"exact"},{"name":"upregulation of mycose catabolic process","type":"exact"},{"name":"upregulation of mycose catabolism","type":"exact"},{"name":"upregulation of mykose catabolic process","type":"exact"},{"name":"upregulation of mykose catabolism","type":"exact"},{"name":"upregulation of trehalose breakdown","type":"exact"},{"name":"upregulation of trehalose catabolic process","type":"exact"},{"name":"upregulation of trehalose catabolism","type":"exact"},{"name":"upregulation of trehalose degradation","type":"exact"}],"termid":"GO:1901319"}


id: PBO:0075572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin family member 2B","termid":"PBO:0075572"}


id: PBO:0073830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 6 opposite strand","termid":"PBO:0073830"}


id: MONDO:0033646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 12","secondary_identifiers":["UMLS:C5436695","MEDGEN:1745691","OMIM:619055","GARD:16410","DOID:0070498"],"synonyms":[{"name":"MC4DN12","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 12","type":"exact"}],"termid":"MONDO:0033646","xrefs":{"Monarch":{"xref_id":"0033646"}}}


id: MOD:01574
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01574"}


id: PBO:0029102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_asparagine_level","termid":"PBO:0029102"}


id: GO:0072294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the connecting tubule of the metanephric nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of connecting tubule identity","termid":"GO:0072085"},{"relation_name":"is_a","term_name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"},{"relation_name":"part_of","term_name":"metanephric connecting tubule development","termid":"GO:0072286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric connecting tubule identity","termid":"GO:0072294"}


id: GO:0004173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Ecdysone + palmitoyl-CoA = CoA + ecdysone palmitate.","definition_xrefs":["RHEA:15217","EC:2.3.1.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"ecdysone O-acyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02375","MetaCyc:ECDYSONE-O-ACYLTRANSFERASE-RXN"],"synonyms":[{"name":"acyl-CoA:ecdysone acyltransferase activity","type":"related"},{"name":"fatty acyl-CoA:ecdysone acyltransferase activity","type":"related"},{"name":"palmitoyl-CoA:ecdysone palmitoyltransferase activity","type":"related"}],"termid":"GO:0004173"}


id: PBO:0077852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1 pseudogene 3","termid":"PBO:0077852"}


id: PBO:0030876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_population_growth","termid":"PBO:0030876"}


id: GO:0030008
data:
  {"annotated_genes":["SJAG_02525","SJAG_04021","SJAG_00820","SJAG_03467","SJAG_04618","SJAG_01415","SJAG_02655","SJAG_04358","SJAG_04837","SJAG_02750","SJAG_03663","SJAG_00850"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90496,100998,104446,91187,99195,111794,76876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990070"},{"annotations":[90497,76877,91188,104447,111795,73273,99196,101661,105293,100999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990071"},{"annotations":[76878,111796,79461,75132,99197,101000,90498,104448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990072"}]},"cv_name":"cellular_component","definition":"A large complex that acts as a tethering factor involved in transporting vesicles from the ER through the Golgi to the plasma membrane. A TRAPP (transport protein particle) complex has a core set of proteins which are joined by specific subunits depending on the cellular component where a given TRAPP complex is active.","definition_xrefs":["GOC:bhm","GOC:vw","PMID:22669257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00820":null,"SJAG_00850":null,"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_04021":null,"SJAG_04358":null,"SJAG_04618":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TRAPP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:TRAPP_complex"],"synonyms":[{"name":"TRAPP1","type":"narrow"},{"name":"TRAPP2","type":"narrow"},{"name":"transport protein particle","type":"exact"},{"name":"transport protein particle complex","type":"exact"}],"termid":"GO:0030008","terms_by_termid":{"GO:1990070":null,"GO:1990071":null,"GO:1990072":null}}


id: FYPO:0002925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CRE promoter in a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromosome at CRE promoter","synonyms":[{"name":"decreased protein localisation to chromosome at CRE promoter","type":"exact"},{"name":"decreased protein localization to M26 site","type":"exact"},{"name":"decreased protein localization to chromosome at CRE promoter during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromosome at CRE promoter during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromosome at CRE promoter","type":"exact"}],"termid":"FYPO:0002925"}


id: FYPO:0006276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyorrhexis, the nuclear fragmentation typical of cell death by apoptosis, occurs at a greater frequency than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["GO:0097194","PMID:18653539","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased karyorrhexis during stationary phase","synonyms":[{"name":"fragmented nuclear envelope during stationary phase entry","type":"related"},{"name":"increased apoptotic nuclear fragmentation during stationary phase","type":"exact"}],"termid":"FYPO:0006276"}


id: PBO:0064774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 6","termid":"PBO:0064774"}


id: MONDO:0100430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liver disease characterized by the presence of excessive fibrous connective tissue in the liver.","definition_xrefs":["PMID:31722201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"fibrotic liver disease","synonyms":[{"name":"hepatic fibrosis (disease)","type":"exact"},{"name":"liver fibrosis (disease)","type":"exact"}],"termid":"MONDO:0100430","xrefs":{"Monarch":{"xref_id":"0100430"}}}


id: PBO:0056767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 18","termid":"PBO:0056767"}


id: PR:Q09859
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide methionine sulfoxide reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.05c","secondary_identifiers":["UniProtKB:Q09859"],"synonyms":[{"name":"Spom972h-MSRA","type":"exact"},{"name":"peptide Met(O) reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peptide-methionine (S)-S-oxide reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein-methionine-S-oxide reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09859"}


id: GO:0051539
data:
  {"annotated_genes":["SJAG_02994","SJAG_00260","SJAG_04183","SJAG_03724","SJAG_04756","SJAG_01935","SJAG_05027","SJAG_04265","SJAG_03222","SJAG_02261","SJAG_00995","SJAG_03553","SJAG_03243","SJAG_02627","SJAG_00153","SJAG_02895","SJAG_04639","SJAG_01630","SJAG_05280","SJAG_02908","SJAG_04085","SJAG_02497","SJAG_01058","SJAG_04736","SJAG_03588","SJAG_02818","SJAG_00455","SJAG_01574","SJAG_04016"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57521,59263,59629,60742,61966,62586,63817,64068,64141,64377,64856,65296,66661,67704,67754,67986,69222,69546,69992,70080,70626,70879,70941,71799,74930,75444,81659,99969,107191],"is_not":false,"summary":null,"term":"GO:0051539"}]},"cv_name":"molecular_function","definition":"Binding to a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.","definition_xrefs":["Wikipedia:Iron-sulfur_cluster","GOC:ai","PMID:15952888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00260":null,"SJAG_00455":null,"SJAG_00995":null,"SJAG_01058":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01935":null,"SJAG_02261":null,"SJAG_02497":null,"SJAG_02627":null,"SJAG_02818":null,"SJAG_02895":null,"SJAG_02908":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03243":null,"SJAG_03553":null,"SJAG_03588":null,"SJAG_03724":null,"SJAG_04016":null,"SJAG_04085":null,"SJAG_04183":null,"SJAG_04265":null,"SJAG_04639":null,"SJAG_04736":null,"SJAG_04756":null,"SJAG_05027":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"4 iron, 4 sulfur cluster binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"4 Fe 4 S cluster binding","type":"exact"},{"name":"4 iron, 4 sulphur cluster binding","type":"exact"},{"name":"4Fe-4S cluster binding","type":"exact"},{"name":"iron-sulfur cluster 4Fe-4S binding","type":"exact"},{"name":"iron-sulphur cluster 4Fe-4S binding","type":"exact"},{"name":"tetrairon tetrasulfide cluster binding","type":"exact"},{"name":"tetrairon tetrasulphide cluster binding","type":"exact"}],"termid":"GO:0051539","terms_by_termid":{"GO:0051539":null}}


id: PBO:0031319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_rapamycin","termid":"PBO:0031319"}


id: PBO:0051461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 9-49","termid":"PBO:0051461"}


id: PBO:0044298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 type A","termid":"PBO:0044298"}


id: GO:0042870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-glucarate, the D-enantiomer of glucarate, is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","GOC:mah","ISBN:0198506732","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"aldarate transmembrane transport","termid":"GO:0042869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"D-glucarate transmembrane transport","synonyms":[{"name":"D-glucarate transport","type":"related"}],"termid":"GO:0042870"}


id: GO:2000176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pro-T cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"positive regulation of lymphoid progenitor cell differentiation","termid":"GO:1905458"},{"relation_name":"is_a","term_name":"regulation of pro-T cell differentiation","termid":"GO:2000174"},{"relation_name":"positively_regulates","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pro-T cell differentiation","synonyms":[{"name":"positive regulation of pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:2000176"}


id: PBO:0045374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 7","termid":"PBO:0045374"}


id: GO:1903828
data:
  {"annotated_genes":["SJAG_01084","SJAG_04597","SJAG_01373","SJAG_01311","SJAG_03970","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[107753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[92811,97735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[96276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[116470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[97736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a protein localization.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01084":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cellular protein localisation","type":"exact"},{"name":"down regulation of cellular protein localization","type":"exact"},{"name":"down-regulation of cellular protein localisation","type":"exact"},{"name":"down-regulation of cellular protein localization","type":"exact"},{"name":"downregulation of cellular protein localisation","type":"exact"},{"name":"downregulation of cellular protein localization","type":"exact"},{"name":"inhibition of cellular protein localisation","type":"narrow"},{"name":"inhibition of cellular protein localization","type":"narrow"},{"name":"negative regulation of cellular protein localisation","type":"exact"},{"name":"negative regulation of cellular protein localization","type":"exact"}],"termid":"GO:1903828","terms_by_termid":{"GO:0042308":null,"GO:0042997":null,"GO:0140325":null,"GO:1900181":null,"GO:1903067":null,"GO:1903077":null}}


id: FYPO:0003939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of m7G(5')pppN diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal m7G(5')pppN diphosphatase activity","synonyms":[{"name":"abnormal mRNA decapping activity","type":"related"}],"termid":"FYPO:0003939"}


id: RO:0002246
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"g is under-expressed in t iff g is expressed in t, and the expression level of g is decreased relative to some background.","direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_in","termid":"RO:0002206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"under-expressed_in","termid":"RO:0002246"}


id: GO:0006373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete 3'-splice site cleavage, exon ligation (obsolete GO:0006373)","synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"exact"}],"termid":"GO:0006373"}


id: GO:1901333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lateral root development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"regulation of lateral root development","termid":"GO:2000023"},{"relation_name":"positively_regulates","term_name":"lateral root development","termid":"GO:0048527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lateral root development","synonyms":[{"name":"activation of lateral root development","type":"narrow"},{"name":"up regulation of lateral root development","type":"exact"},{"name":"up-regulation of lateral root development","type":"exact"},{"name":"upregulation of lateral root development","type":"exact"}],"termid":"GO:1901333"}


id: GO:0071587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent alteration of one or more amino acid residues within the CAAX box region of CAAX box proteins.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete CAAX-box protein modification (obsolete GO:0071587)","termid":"GO:0071587"}


id: PBO:0000453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein","termid":"PBO:0000453"}


id: MONDO:0021538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A verrucous carcinoma that involves the oral cavity.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity squamous cell carcinoma","termid":"MONDO:0004958"},{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"verrucous carcinoma of oral cavity","secondary_identifiers":["NCIT:C8174","MEDGEN:124716","UMLS:C0280306","SCTID:403889000"],"synonyms":[{"name":"mouth verrucous carcinoma","type":"exact"},{"name":"oral cavity verrucous cancer","type":"exact"},{"name":"oral cavity verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of mouth","type":"exact"},{"name":"verrucous carcinoma of the mouth","type":"exact"},{"name":"verrucous carcinoma of the oral cavity","type":"exact"}],"termid":"MONDO:0021538","xrefs":{"Monarch":{"xref_id":"0021538"}}}


id: PBO:0108888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 1","termid":"PBO:0108888"}


id: PBO:0091879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER sterol deacetylase Say1","termid":"PBO:0091879"}


id: MONDO:0005861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of drug-resistant tuberculosis that is resistant to both rifampicin and isoniazid, the two most powerful anti-TB drugs.","definition_xrefs":["PMID:25918181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug-resistant tuberculosis","termid":"MONDO:0041806"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multidrug-resistant tuberculosis","secondary_identifiers":["DOID:401","MEDGEN:60163","SCTID:423092005","UMLS:C0206526","EFO:0007381","NCIT:C128415","MESH:D018088"],"synonyms":[{"name":"MDR-TB","type":"exact"},{"name":"multidrug-resistant TB","type":"exact"}],"termid":"MONDO:0005861","xrefs":{"Monarch":{"xref_id":"0005861"}}}


id: GO:0086102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway that contributes to a decrease in frequency or rate of heart contraction through inhibition of adenylate cyclase (AC) activity. Binding of acetylcholine to a G protein-coupled (muscarinic) receptor on the surface of the signal-receiving cell results in the activation of an intracellular Gi/o protein. Gi/o inhibits adenylate cyclase to decrease cyclic-AMP (cAMP) levels. Since cAMP binds directly to F-channels to allow an inward flow of sodium (funny current, If current), a reduction in cAMP reduces the funny current to bring about membrane hyperpolarization and a decrease in heart rate.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate (obsolete GO:0086102)","synonyms":[{"name":"AC-inhibiting muscarinic receptor signaling pathway involved in negative regulation of heart rate","type":"related"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate via inhibition of adenylate cyclase activity","type":"exact"},{"name":"Gi-coupled G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate","type":"broad"},{"name":"adenylate cyclase-inhibiting G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate","type":"exact"},{"name":"muscarinic receptor signalling pathway involved in negative regulation of heart rate by inhibition of If channel","type":"exact"},{"name":"muscarinic receptor signalling pathway involved in negative regulation of heart rate by inhibition of funny current","type":"exact"}],"termid":"GO:0086102"}


id: PBO:0079897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 6","termid":"PBO:0079897"}


id: PBO:0051394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 2","termid":"PBO:0051394"}


id: MONDO:0008884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome is characterized by congenital anodontia, a small maxilla, short stature with shortened metacarpals and metatarsals, sparse hair, albinoidism and multiple ocular anomalies. It has been described in three siblings (one brother and two sisters). Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"oculoosteocutaneous syndrome","secondary_identifiers":["MEDGEN:347867","SCTID:722061006","GARD:992","MESH:C565893","OMIM:211370","UMLS:C1859385"],"synonyms":[{"name":"BRACHYMETAPODY-anodontia-hypotrichosis-ALBINOIDISM","type":"exact"},{"name":"anodontia-hypotrichosis syndrome","type":"exact"},{"name":"brachymetapody anodontia hypotrichosis albinoidism","type":"exact"},{"name":"oculoosteocutaneous syndrome","type":"exact"}],"termid":"MONDO:0008884","xrefs":{"Monarch":{"xref_id":"0008884"}}}


id: GO:2001296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N(omega)-methyl-L-arginine.","definition_xrefs":["PMID:10510241","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"N(omega)-methyl-L-arginine metabolic process","synonyms":[{"name":"N(omega)-methyl-L-arginine metabolism","type":"exact"}],"termid":"GO:2001296"}


id: GO:1903479
data:
  {"annotated_genes":["SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79212],"is_not":false,"summary":null,"term":"GO:1903479"}]},"cv_name":"biological_process","definition":"Any actin filament organization that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000060","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly actin filament organization","termid":"GO:2000689"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0000281","GO:0030036","GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring assembly actin filament organization","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903479","terms_by_termid":{"GO:1903479":null}}


id: MONDO:0100503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder in which the cause of the disease is a mutation in the DPH5 gene, which is characterized by craniofacial dysmorphology, profound neurodevelopmental delay, multisystem abnormalities, and miscarriages.","definition_xrefs":["PMID:35482014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"DPH5-related diphthamide-deficiency syndrome","termid":"MONDO:0100503","xrefs":{"Monarch":{"xref_id":"0100503"}}}


id: MONDO:1012870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any heart disorder characterized by pathologically prolonged ventricular action potential duration that occurs in rabbits due to a mutation in the KCNE1 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:27076034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long QT syndrome, KCNE1-related, rabbit","secondary_identifiers":["OMIA:002334-9986"],"termid":"MONDO:1012870","xrefs":{"Monarch":{"xref_id":"1012870"}}}


id: GO:2001241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001238"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:2001239"},{"relation_name":"positively_regulates","term_name":"extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:0097192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of extrinsic apoptotic signaling pathway in absence of ligand","secondary_identifiers":["Reactome:R-HSA-9603505"],"synonyms":[{"name":"positive regulation of dependence receptor signaling pathway","type":"related"},{"name":"positive regulation of extrinsic apoptosis in absence of ligand","type":"narrow"},{"name":"positive regulation of extrinsic apoptotic signalling pathway in absence of ligand","type":"exact"}],"termid":"GO:2001241"}


id: PBO:0073170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L adaptor subunit of ERAD E3 ubiquitin ligase","termid":"PBO:0073170"}


id: SO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the micronuclei of a cell.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micronuclear_sequence","synonyms":[{"name":"micronuclear sequence","type":"exact"}],"termid":"SO:0000084"}


id: PBO:0047725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 neighbor","termid":"PBO:0047725"}


id: GO:1905068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of canonical Wnt signaling pathway involved in heart development.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","PMID:25034767"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of canonical Wnt signaling pathway involved in heart development (obsolete GO:1905068)","synonyms":[{"name":"activation of canonical Wnt receptor signaling pathway involved in heart development","type":"narrow"},{"name":"activation of canonical Wnt receptor signalling pathway involved in heart development","type":"narrow"},{"name":"activation of canonical Wnt signaling pathway involved in heart development","type":"narrow"},{"name":"activation of canonical Wnt-activated signaling pathway involved in heart development","type":"narrow"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"up regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"up regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"up regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"up regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"up-regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"up-regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"upregulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"upregulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"upregulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"upregulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:1905068"}


id: GO:0016421
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003989"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of a carboxyl group to a molecule that is attached to CoA, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"CoA carboxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016421","terms_by_termid":{"GO:0003989":null}}


id: PBO:0048011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 8 pseudogene 1","termid":"PBO:0048011"}


id: GO:0061093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["GOC:dph","GOC:tb","PMID:19966303","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid transport","termid":"GO:2001139"},{"relation_name":"negatively_regulates","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"negative regulation of phospholipid translocation","termid":"GO:0061093"}


id: PBO:0067902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 204","termid":"PBO:0067902"}


id: GO:0033441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"AAU codon-amino acid adaptor activity","synonyms":[{"name":"AAT codon-amino acid adaptor activity","type":"exact"},{"name":"asparagine tRNA","type":"related"}],"termid":"GO:0033441"}


id: GO:0071851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during G1 phase, as a result of deprivation of nitrogen.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:0071851)","synonyms":[{"name":"G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"}],"termid":"GO:0071851"}


id: GO:0141116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont prevents host complement activation by sequestering it away from its surface.","definition_xrefs":["PMID:18323455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by complement sequestering","synonyms":[{"name":"suppression of complement activation by another organism by complement sequestering","type":"broad"}],"termid":"GO:0141116"}


id: GO:2000636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of primary microRNA processing.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of miRNA processing","termid":"GO:1903800"},{"relation_name":"is_a","term_name":"regulation of primary miRNA processing","termid":"GO:2000634"},{"relation_name":"positively_regulates","term_name":"primary miRNA processing","termid":"GO:0031053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of primary miRNA processing","synonyms":[{"name":"positive regulation of pri-miRNA processing","type":"exact"},{"name":"positive regulation of primary microRNA processing","type":"exact"}],"termid":"GO:2000636"}


id: GO:0002875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chronic inflammatory response","termid":"GO:0002677"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response to antigenic stimulus","termid":"GO:0002862"},{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response to antigenic stimulus","termid":"GO:0002874"},{"relation_name":"negatively_regulates","term_name":"chronic inflammatory response to antigenic stimulus","termid":"GO:0002439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chronic inflammatory response to antigenic stimulus","synonyms":[{"name":"down regulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"down-regulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"downregulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"inhibition of chronic inflammatory response to antigenic stimulus","type":"narrow"}],"termid":"GO:0002875"}


id: PBO:0073792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 12","termid":"PBO:0073792"}


id: PBO:0047038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 104 member A","termid":"PBO:0047038"}


id: GO:0018462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(hydroxymethyl)benzenesulfonate + NAD+ = 4-formylbenzenesulfonate + H+ + NADH.","definition_xrefs":["RHEA:24412","EC:1.1.1.257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-(hydroxymethyl)benzenesulfonate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0291","MetaCyc:SOLDEHYD-RXN","KEGG_REACTION:R05271"],"synonyms":[{"name":"4-(hydroxymethyl)benzenesulfonate:NAD+ oxidoreductase activity","type":"related"},{"name":"4-(hydroxymethyl)benzenesulphonate dehydrogenase activity","type":"exact"},{"name":"4-sulfobenzyl alcohol dehydrogenase activity","type":"exact"}],"termid":"GO:0018462"}


id: GO:0045220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of FasL.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of FasL production (obsolete GO:0045220)","synonyms":[{"name":"activation of FasL biosynthetic process","type":"narrow"},{"name":"positive regulation of FasL anabolism","type":"exact"},{"name":"positive regulation of FasL biosynthesis","type":"exact"},{"name":"positive regulation of FasL biosynthetic process","type":"exact"},{"name":"positive regulation of FasL formation","type":"exact"},{"name":"positive regulation of FasL synthesis","type":"exact"},{"name":"stimulation of FasL biosynthetic process","type":"narrow"},{"name":"up regulation of FasL biosynthetic process","type":"exact"},{"name":"up-regulation of FasL biosynthetic process","type":"exact"},{"name":"upregulation of FasL biosynthetic process","type":"exact"}],"termid":"GO:0045220"}


id: PBO:0045646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 4","termid":"PBO:0045646"}


id: MONDO:0010795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually benign neoplasm composed of large cells with abundant eosinophilic granular cytoplasm. Representative examples include oncocytic neoplasms of the thyroid gland, and kidney. (NCI05)","definition_xrefs":["NCIT:C7072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncocytic neoplasm","secondary_identifiers":["UMLS:C1378050","OMIM:553000","MEDGEN:237181"],"synonyms":[{"name":"oncocytic neoplasm","type":"exact"},{"name":"oncocytic tumor","type":"exact"},{"name":"oncocytic tumour","type":"exact"},{"name":"oncocytoma","type":"broad"},{"name":"oncocytoma, benign","type":"exact"}],"termid":"MONDO:0010795","xrefs":{"Monarch":{"xref_id":"0010795"}}}


id: MONDO:0007492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare movement disorder characterized by involuntary, repetitive, sustained muscle contractions or postures involving one or more sites of the body.","definition_xrefs":["Orphanet:256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset generalized dystonia","termid":"MONDO:0100016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"early-onset generalized limb-onset dystonia","secondary_identifiers":["MEDGEN:338823","NANDO:2200884","NCIT:C116718","OMIM:128100","MONDO:0023033","MESH:C538005","NANDO:2100240","UMLS:C1851945","NANDO:1200512","DOID:0060730","GARD:2027"],"synonyms":[{"name":"DYT-TOR1A","type":"exact"},{"name":"DYT-TOR1A dystonia","type":"related"},{"name":"DYT1","type":"exact"},{"name":"Dyt1","type":"related"},{"name":"EOTD","type":"exact"},{"name":"Early-onset Primary dystonia","type":"related"},{"name":"Early-onset torsion dystonia","type":"related"},{"name":"Oppenheim dystonia","type":"exact"},{"name":"Oppenheim's dystonia","type":"exact"},{"name":"Primary torsion dystonia","type":"related"},{"name":"dystonia 1","type":"related"},{"name":"dystonia 1, torsion, Autosomal dominant","type":"related"},{"name":"dystonia 1, torsion, autosomal dominant","type":"related"},{"name":"dystonia musculorum deformans","type":"exact"},{"name":"dystonia musculorum deformans 1","type":"related"},{"name":"dystonia-1, torsion","type":"exact"},{"name":"early onset primary dystonia","type":"exact"},{"name":"early onset torsion dystonia","type":"exact"},{"name":"early-onset generalised torsion dystonia","type":"exact"},{"name":"early-onset generalized limb-onset dystonia","type":"exact"},{"name":"early-onset generalized torsion dystonia","type":"exact"},{"name":"early-onset primary dystonia","type":"exact"},{"name":"early-onset torsion dystonia","type":"exact"},{"name":"idiopathic dystonia","type":"exact"},{"name":"idiopathic dystonia DYT1","type":"related"},{"name":"idiopathic torsion dystonia","type":"related"},{"name":"torsion dystonia 1","type":"related"},{"name":"torsion dystonia 1, autosomal dominant","type":"related"},{"name":"torsion dystonia type 1","type":"exact"}],"termid":"MONDO:0007492","xrefs":{"Monarch":{"xref_id":"0007492"}}}


id: GO:0008667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate + NAD+ = 2,3-dihydroxybenzoate + H+ + NADH.","definition_xrefs":["RHEA:23824","EC:1.3.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity","secondary_identifiers":["MetaCyc:DHBDEHYD-RXN","KEGG_REACTION:R01505"],"synonyms":[{"name":"2,3-DHB dehydrogenase activity","type":"related"},{"name":"2,3-dihydro-2,3-dihydroxybenzoate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0008667"}


id: PBO:0086973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of protein phosphatase 1 (Glc7p); involved in glycogen metabolism and chromosome segregation; proposed to regulate Glc7p activity via conformational alteration; ortholog of the mammalian protein phosphatase inhibitor 2; protein abundance increases in response to DNA replication stress","termid":"PBO:0086973"}


id: PBO:0046302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engrailed homeobox 2","termid":"PBO:0046302"}


id: PBO:0048980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 3","termid":"PBO:0048980"}


id: PBO:0085128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein implicated in ribosome biogenesis; deletion extends chronological lifespan","termid":"PBO:0085128"}


id: MONDO:0010811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-cancerous nodular enlargement of the prostate gland. It is characterized by the presence of epithelial cell nodules, and stromal nodules containing fibrous and smooth muscle elements. It is the most common urologic disorder in men, causing blockage of urine flow.","definition_xrefs":["NCIT:C2897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate disorder","termid":"MONDO:0003105"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign prostatic hyperplasia","secondary_identifiers":["HP:0008711","MEDGEN:312369","UMLS:C1704272","OMIM:600082","EFO:0000284","MESH:D011470","ICD9:600.0","SCTID:266569009","DOID:11132","ICD9:600","ICD9:600.20"],"synonyms":[{"name":"BPH","type":"related"},{"name":"benign hyperplasia of prostate","type":"exact"},{"name":"benign hyperplasia of the prostate","type":"exact"},{"name":"benign prostate hyperplasia","type":"exact"},{"name":"benign prostatic Hypertrophy","type":"exact"},{"name":"benign prostatic hyperplasia","type":"exact"},{"name":"benign prostatic hyperplasia (disease)","type":"exact"},{"name":"benign prostatic hyperplasia - BPH","type":"exact"},{"name":"benign prostatic hypertrophy","type":"exact"},{"name":"prostate hypertrophy","type":"broad"},{"name":"prostatic hyperplasia, benign","type":"related"},{"name":"prostatic hypertrophy","type":"broad"}],"termid":"MONDO:0010811","xrefs":{"Monarch":{"xref_id":"0010811"}}}


id: RO:0002501
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one of direct activation or direct inhibition. p may be upstream, downstream, part of or a container of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_processes","termid":"RO:0002501"}


id: GO:0035439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate = halima-5(6),13-dien-15-yl diphosphate.","definition_xrefs":["EC:5.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853","GO:0009975"],"is_obsolete":false,"name":"halimadienyl-diphosphate synthase activity","secondary_identifiers":["RHEA:25621"],"synonyms":[{"name":"halima-5(6),13-dien-15-yl-diphosphate lyase (cyclizing)","type":"related"},{"name":"halimadienyl diphosphate synthase activity","type":"related"}],"termid":"GO:0035439"}


id: PBO:0014614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA complementary to adh1, major transcript","termid":"PBO:0014614"}


id: PBO:0046464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Era like 12S mitochondrial rRNA chaperone 1","termid":"PBO:0046464"}


id: PATO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having the shape of an incisor tooth.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/incisiform"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incisiform","termid":"PATO:0002209"}


id: GO:0062207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a pattern recognition receptor signaling pathway.","definition_xrefs":["PMID:30610168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"}


id: PBO:0116577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gocam_title_termid","termid":"PBO:0116577"}


id: GO:0052041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of host programmed cell death, leading to a decrease in the frequency, rate or extent of programmed cell death in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host programmed cell death","termid":"GO:0052040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host programmed cell death","synonyms":[{"name":"down regulation by symbiont of host programmed cell death","type":"exact"},{"name":"down-regulation by symbiont of host programmed cell death","type":"exact"},{"name":"downregulation by symbiont of host programmed cell death","type":"exact"},{"name":"inhibition by symbiont of host programmed cell death","type":"narrow"},{"name":"inhibition of host programmed cell death","type":"exact"},{"name":"negative regulation by symbiont of host programmed cell death","type":"exact"},{"name":"suppression by symbiont of host PCD","type":"exact"},{"name":"suppression by symbiont of host programmed cell death","type":"exact"}],"termid":"GO:0052041"}


id: PBO:0004356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP 5'-nucleotidase (predicted)","termid":"PBO:0004356"}


id: PBO:0042102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 174","termid":"PBO:0042102"}


id: MONDO:0004391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A extraosseous chondrosarcoma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete adult extraosseous chondrosarcoma (obsolete MONDO:0004391)","secondary_identifiers":["DOID:7902"],"synonyms":[{"name":"extraosseous chondrosarcoma of adults","type":"exact"}],"termid":"MONDO:0004391","xrefs":{"Monarch":{"xref_id":"0004391"}}}


id: PBO:0083961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General transcriptional co-repressor; acts together with Tup1p; also acts as part of a transcriptional co-activator complex that recruits the SWI/SNF and SAGA complexes to promoters; can form the prion [OCT+]","termid":"PBO:0083961"}


id: MONDO:0017470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital knee dislocation","secondary_identifiers":["MedDRA:10010520","HP:0005191","MEDGEN:75582","SCTID:59068006","ICD9:754.41","GARD:21211","icd11.foundation:1229590493","UMLS:C0265669","Orphanet:295034"],"synonyms":[{"name":"congenital knee dislocation","type":"exact"},{"name":"congenital knee dislocation (disease)","type":"exact"}],"termid":"MONDO:0017470","xrefs":{"Monarch":{"xref_id":"0017470"}}}


id: GO:0048313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The partitioning of Golgi apparatus between daughter cells at cell division.","definition_xrefs":["GOC:jid","PMID:12851069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi inheritance","secondary_identifiers":["Reactome:R-HSA-162658"],"synonyms":[{"name":"Golgi apparatus inheritance","type":"exact"},{"name":"Golgi division","type":"exact"},{"name":"Golgi partitioning","type":"exact"}],"termid":"GO:0048313"}


id: GO:0103106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: brassinolide + UDP-alpha-D-glucose = brassinolide-23-O-glucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete brassinolide 23-O-glucosyltransferase activity (obsolete GO:0103106)","termid":"GO:0103106"}


id: GO:0015693
data:
  {"annotated_genes":["SJAG_03516","SJAG_02484","SJAG_00211","SJAG_04111","SJAG_02578","SJAG_01639"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"},{"annotations":[56970,57684,63294,118984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903830"},{"annotations":[79235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045016"}]},"cv_name":"biological_process","definition":"The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00211":null,"SJAG_01639":null,"SJAG_02484":null,"SJAG_02578":null,"SJAG_03516":null,"SJAG_04111":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"magnesium ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"magnesium transport","type":"related"}],"termid":"GO:0015693","terms_by_termid":{"GO:0045016":null,"GO:1903830":null,"GO:1990616":null}}


id: GO:0097496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A blood vessel lumenization process that occurs by blood vessel endothelial cells delaminating and aligning along the inner surface of an existing luminal space, extending the open ended lumen, and joining to other blood vessels to form a complete blood vessel.","definition_xrefs":["GOC:dgh","PMID:23698350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel lumenization","termid":"GO:0072554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel lumen ensheathment","termid":"GO:0097496"}


id: MOD:01267
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:271#K","PubMed:11746907","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site K","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01267"}


id: PBO:0087261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase of the the RAM signaling network; Ndr/LATS family member; binds regulatory subunit Mob2p; involved in regulation of cellular morphogenesis, polarized growth, and septum destruction; phosphorylation by Cbk1p regulates localization and activity of Ace2p transcription factor and Ssd1p translational repressor; Cbk1p activity is regulated by both phosphorylation and specific localization; relocalizes to cytoplasm upon DNA replication stress","termid":"PBO:0087261"}


id: GO:2000478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric glomerular visceral epithelial cell development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of metanephric podocyte development","termid":"GO:2000477"},{"relation_name":"positively_regulates","term_name":"metanephric podocyte development","termid":"GO:0072249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric podocyte development","synonyms":[{"name":"positive regulation of metanephric glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:2000478"}


id: PBO:0045014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disco interacting protein 2 homolog C","termid":"PBO:0045014"}


id: MONDO:1010971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysautonomia that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysautonomia, non-human animal","termid":"MONDO:1010229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia, llama","secondary_identifiers":["OMIA:000312-9844"],"termid":"MONDO:1010971","xrefs":{"Monarch":{"xref_id":"1010971"}}}


id: PBO:0045017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent protein kinase domain 1B","termid":"PBO:0045017"}


id: PBO:0057607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-4","termid":"PBO:0057607"}


id: PBO:0052870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-14, pseudogene","termid":"PBO:0052870"}


id: PBO:0113548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD-repeat protein involved in Ub-mediated proteolysis; K48-, K29-specific Ub chain binding protein involved in Ub homeostasis; substrate-recruiting adaptor for Cdc48p in mitochondria-associated degradation; inhibits degradation of Ufd2p-dependent substrates; facilitates proteolysis of Cse4p, a centromeric H3-like protein; required for ribophagy; promotes NHEJ in postdiauxic/stationary phase; protein increases in abundance and relocalizes from nucleus to nuclear periphery upon replication stress","termid":"PBO:0113548"}


id: PBO:0077018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS4 antisense RNA 1","termid":"PBO:0077018"}


id: PBO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a-b","termid":"PBO:0002364"}


id: PBO:0055796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a)","termid":"PBO:0055796"}


id: GO:0006433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling proline to prolyl-tRNA, catalyzed by prolyl-tRNA synthetase. The prolyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a methionine-accetping tRNA.","definition_xrefs":["ISBN:0716730510","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006520","GO:0006399"],"is_obsolete":false,"name":"prolyl-tRNA aminoacylation","termid":"GO:0006433"}


id: PBO:0070003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1299, pseudogene","termid":"PBO:0070003"}


id: GO:0010593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellipodium assembly","termid":"GO:0010591"},{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"negative regulation of lamellipodium organization","termid":"GO:1902744"},{"relation_name":"negatively_regulates","term_name":"lamellipodium assembly","termid":"GO:0030032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of lamellipodium assembly","synonyms":[{"name":"negative regulation of lamellipodium biogenesis","type":"related"}],"termid":"GO:0010593"}


id: PATO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000353 secondary product composition value (obsolete PATO:0000353)","termid":"PATO:0000353"}


id: PBO:0010241
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene merge, prl10 was a subsequence of SPNCRNA.1234","termid":"PBO:0010241"}


id: GO:0004852
data:
  {"annotated_genes":["SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76707],"is_not":false,"summary":null,"term":"GO:0004852"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymethylbilane = H2O + uroporphyrinogen III.","definition_xrefs":["RHEA:18965","EC:4.2.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"uroporphyrinogen-III synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R03165","MetaCyc:UROGENIIISYN-RXN","Reactome:R-HSA-189488"],"synonyms":[{"name":"URO-synthase activity","type":"related"},{"name":"hydroxymethylbilane hydro-lyase (cyclizing) activity","type":"related"},{"name":"hydroxymethylbilane hydro-lyase (cyclizing; uroporphyrinogen-III-forming)","type":"related"},{"name":"porphobilinogenase activity","type":"related"},{"name":"uroporphyrinogen III cosynthase activity","type":"related"},{"name":"uroporphyrinogen isomerase activity","type":"related"},{"name":"uroporphyrinogen-III cosynthase activity","type":"related"},{"name":"uroporphyrinogen-III cosynthetase activity","type":"related"}],"termid":"GO:0004852","terms_by_termid":{"GO:0004852":null}}


id: PBO:0086602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is induced by activation of the HOG1 mitogen-activated signaling pathway and this induction is Hog1p/Pbs2p dependent; YJL107C and adjacent ORF, YJL108C are merged in related fungi","termid":"PBO:0086602"}


id: GO:0071763
data:
  {"annotated_genes":["SJAG_04464","SJAG_01263","SJAG_03313","SJAG_04883","SJAG_04509","SJAG_04319","SJAG_00840","SJAG_00900","SJAG_01050","SJAG_04578","SJAG_00416","SJAG_03073","SJAG_03449","SJAG_00680","SJAG_03891","SJAG_01460","SJAG_03219","SJAG_04972","SJAG_01745","SJAG_02763","SJAG_04271","SJAG_01906","SJAG_00810","SJAG_01467","SJAG_03491","SJAG_01356","SJAG_04489","SJAG_01242","SJAG_03892","SJAG_03783","SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93803,105380,107902,109673,111703,121510],"is_not":false,"summary":null,"term":"GO:0071763"},{"annotations":[95701,103356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140515"},{"annotations":[100248,99580,111883,89722,112295,94918],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101026"},{"annotations":[112435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007077"},{"annotations":[121189,121292,121378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0101024"},{"annotations":[121369,121370,93197,121372,99852,102800,108510,121371,97845,105067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"},{"annotations":[105584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[72302,93198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071765"},{"annotations":[80452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"},{"annotations":[73888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031468"},{"annotations":[95702,105587],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905557"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear inner or outer membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"nuclear envelope organization","termid":"GO:0006998"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00680":null,"SJAG_00810":null,"SJAG_00840":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01263":null,"SJAG_01356":null,"SJAG_01460":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03073":null,"SJAG_03219":null,"SJAG_03313":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04271":null,"SJAG_04319":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_04509":null,"SJAG_04578":null,"SJAG_04883":null,"SJAG_04972":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"nuclear membrane organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32243490":null},"synonyms":[{"name":"nuclear membrane organisation","type":"exact"},{"name":"nuclear membrane organization and biogenesis","type":"related"}],"termid":"GO:0071763","terms_by_termid":{"GO:0007077":null,"GO:0007084":null,"GO:0031468":null,"GO:0048288":null,"GO:0071763":null,"GO:0071765":null,"GO:0101024":null,"GO:0101026":null,"GO:0140515":null,"GO:0140516":null,"GO:1905557":null}}


id: PBO:0030266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_ethidium_bromide","termid":"PBO:0030266"}


id: PBO:0072474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 3","termid":"PBO:0072474"}


id: PBO:0089236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit Spc1","termid":"PBO:0089236"}


id: GO:0034859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzothiazole + 1/2 O2 = 2-hydroxybenzothiazole.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benzothiazole monooxygenase activity (obsolete GO:0034859)","termid":"GO:0034859"}


id: MONDO:0017259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic diseases with anterior uveitis (obsolete MONDO:0017259)","secondary_identifiers":["Orphanet:280926"],"termid":"MONDO:0017259","xrefs":{"Monarch":{"xref_id":"0017259"}}}


id: PBO:0000745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Hhp2","termid":"PBO:0000745"}


id: MONDO:0032696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 6","secondary_identifiers":["UMLS:C5193047","MEDGEN:1682649","OMIM:618353"],"synonyms":[{"name":"OOCYTE MATURATION DEFECT 6","type":"related"},{"name":"OOMD6","type":"related"}],"termid":"MONDO:0032696","xrefs":{"Monarch":{"xref_id":"0032696"}}}


id: MONDO:0014364
data:
  {"annotated_genes":["SJAG_03099"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88259],"is_not":false,"summary":null,"term":"MONDO:0014364"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the LYRM7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03099":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4014440","GARD:16018","MEDGEN:862877","DOID:0080117","OMIM:615838"],"synonyms":[{"name":"LYRM7 mitochondrial complex III deficiency","type":"exact"},{"name":"MC3DN8","type":"related"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 8","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in LYRM7","type":"exact"},{"name":"mitochondrial complex III deficiency nuclear type 8","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 8","type":"related"}],"termid":"MONDO:0014364","terms_by_termid":{"MONDO:0014364":null},"xrefs":{"Monarch":{"xref_id":"0014364"}}}


id: MONDO:0004479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that occurs during childhood.","definition_xrefs":["NCIT:C6541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood germ cell tumor","termid":"MONDO:0003751"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant childhood germ cell neoplasm","secondary_identifiers":["MEDGEN:233150","DOID:8149","UMLS:C1334574"],"synonyms":[{"name":"malignant childhood germ cell neoplasm","type":"exact"},{"name":"malignant childhood germ cell tumor","type":"related"},{"name":"malignant childhood germ cell tumour","type":"related"},{"name":"malignant paediatric germ cell neoplasm","type":"related"},{"name":"malignant paediatric germ cell tumour","type":"exact"},{"name":"malignant pediatric germ cell neoplasm","type":"related"},{"name":"malignant pediatric germ cell tumor","type":"exact"}],"termid":"MONDO:0004479","xrefs":{"Monarch":{"xref_id":"0004479"}}}


id: PBO:0048432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta 3 (gene/pseudogene)","termid":"PBO:0048432"}


id: PBO:0084357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lectin-like protein with similarity to Flo1p; thought to be expressed and involved in flocculation","termid":"PBO:0084357"}


id: FYPO:0004077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype that results in the formation of an ascus that contains a single spore that is larger than normal.","definition_xrefs":["PomBase:mah","PMID:15331764","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with fewer than four spores","termid":"FYPO:0003066"},{"relation_name":"output_of","term_name":"abolished meiosis I","termid":"FYPO:0003378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with single large spore","synonyms":[{"name":"abnormal ascospore formation resulting in formation of ascus with single large spore","type":"exact"},{"name":"abnormal sporulation resulting in formation of single-spored asci","type":"exact"}],"termid":"FYPO:0004077"}


id: MONDO:0011171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Odonto-tricho-ungual-digito-palmar syndrome is characterized by neonatal teeth, trichodystrophy and malformations of the hands and feet. To date, it has been reported in 21 patients and is transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:69082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"odonto-tricho-ungual-digito-palmar syndrome","secondary_identifiers":["UMLS:C1865998","MESH:C566598","MEDGEN:400891","OMIM:601957","icd11.foundation:386386782","GARD:16679","SCTID:722063009"],"synonyms":[{"name":"ODONTOTRICHOUNGUAL-digital-palmar syndrome","type":"related"},{"name":"OTUDP syndrome","type":"exact"},{"name":"Otudp syndrome","type":"related"},{"name":"odonto-tricho-ungual-digito-palmar syndrome, Mendoza-Valiente type","type":"exact"}],"termid":"MONDO:0011171","xrefs":{"Monarch":{"xref_id":"0011171"}}}


id: GO:0075078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The receptor is defined as a protein on the cell membrane or within the cytoplasm or cell nucleus that binds to a specific molecule (a ligand) such as a neurotransmitter or a hormone or other substance, and initiates the cellular response to the ligand. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075078)","termid":"GO:0075078"}


id: PR:Q7LL04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1494.01 gene.","definition_xrefs":["UniProtKB:Q7LL04","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0676 protein C1494.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.01","synonyms":[{"name":"Spom972h-SPCC1494.01","type":"exact"}],"termid":"PR:Q7LL04"}


id: GO:1902054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neosartoricin biosynthetic process.","definition_xrefs":["GOC:di","PMID:23368997","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of polyketide biosynthetic process","termid":"GO:1900733"},{"relation_name":"is_a","term_name":"regulation of neosartoricin biosynthetic process","termid":"GO:1902053"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"neosartoricin biosynthetic process","termid":"GO:1902050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of neosartoricin biosynthetic process","synonyms":[{"name":"down regulation of neosartoricin anabolism","type":"exact"},{"name":"down regulation of neosartoricin biosynthesis","type":"exact"},{"name":"down regulation of neosartoricin biosynthetic process","type":"exact"},{"name":"down regulation of neosartoricin formation","type":"exact"},{"name":"down regulation of neosartoricin synthesis","type":"exact"},{"name":"down-regulation of neosartoricin anabolism","type":"exact"},{"name":"down-regulation of neosartoricin biosynthesis","type":"exact"},{"name":"down-regulation of neosartoricin biosynthetic process","type":"exact"},{"name":"down-regulation of neosartoricin formation","type":"exact"},{"name":"down-regulation of neosartoricin synthesis","type":"exact"},{"name":"downregulation of neosartoricin anabolism","type":"exact"},{"name":"downregulation of neosartoricin biosynthesis","type":"exact"},{"name":"downregulation of neosartoricin biosynthetic process","type":"exact"},{"name":"downregulation of neosartoricin formation","type":"exact"},{"name":"downregulation of neosartoricin synthesis","type":"exact"},{"name":"inhibition of neosartoricin anabolism","type":"exact"},{"name":"inhibition of neosartoricin biosynthesis","type":"exact"},{"name":"inhibition of neosartoricin biosynthetic process","type":"narrow"},{"name":"inhibition of neosartoricin formation","type":"exact"},{"name":"inhibition of neosartoricin synthesis","type":"exact"},{"name":"negative regulation of neosartoricin anabolism","type":"exact"},{"name":"negative regulation of neosartoricin biosynthesis","type":"exact"},{"name":"negative regulation of neosartoricin formation","type":"exact"},{"name":"negative regulation of neosartoricin synthesis","type":"exact"}],"termid":"GO:1902054"}


id: GO:0009624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nematode","synonyms":[{"name":"response to nematodes","type":"exact"}],"termid":"GO:0009624"}


id: GO:0045847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nitrogen utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitrogen utilization","termid":"GO:0006808"},{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"negatively_regulates","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitrogen utilization","synonyms":[{"name":"down regulation of nitrogen utilization","type":"exact"},{"name":"down-regulation of nitrogen utilization","type":"exact"},{"name":"downregulation of nitrogen utilization","type":"exact"},{"name":"inhibition of nitrogen utilization","type":"narrow"}],"termid":"GO:0045847"}


id: PBO:0057334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 521-1","termid":"PBO:0057334"}


id: SO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a dicistronic transcript.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_polycistronic_transcript","termid":"SO:0000690"},{"relation_name":"transcribed_to","term_name":"dicistronic_transcript","termid":"SO:0000079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_dicistronic_transcript","synonyms":[{"name":"gene with dicistronic transcript","type":"exact"}],"termid":"SO:0000692"}


id: GO:0033088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of immature T cell proliferation in the thymus.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immature T cell proliferation in thymus","termid":"GO:0033084"},{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation in thymus","termid":"GO:0033085"},{"relation_name":"is_a","term_name":"negative regulation of immature T cell proliferation","termid":"GO:0033087"},{"relation_name":"negatively_regulates","term_name":"immature T cell proliferation in thymus","termid":"GO:0033080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of immature T cell proliferation in thymus","synonyms":[{"name":"negative regulation of thymic T cell proliferation","type":"exact"},{"name":"negative regulation of thymocyte cell proliferation","type":"exact"},{"name":"negative regulation of thymocyte proliferation","type":"exact"}],"termid":"GO:0033088"}


id: GO:1904177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adipose tissue development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23081848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"adipose tissue development","termid":"GO:0060612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adipose tissue development","secondary_identifiers":["Reactome:R-HSA-9843745"],"synonyms":[{"name":"regulation of adipogenesis","type":"related"}],"termid":"GO:1904177"}


id: MONDO:0024472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease of the Mediterranean area, the Crimea, Africa, and India, caused by infection with rickettsia conorii subsp. coronorii.","definition_xrefs":["PMID:18760001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsia conorii infectious disease","termid":"MONDO:0005677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"boutonneuse fever","secondary_identifiers":["GARD:19031","DOID:14095","MedDRA:10006045","MEDGEN:14205","Orphanet:101334","icd11.foundation:1771381430","ICD9:082.1","SCTID:186774005","UMLS:C0006060","MESH:D001907","Orphanet:83313"],"synonyms":[{"name":"African tick typhus","type":"exact"},{"name":"Conor and Bruch's disease","type":"exact"},{"name":"Kenya fever","type":"exact"},{"name":"Kenya tick typhus","type":"exact"},{"name":"Kenyan tick typhus","type":"exact"},{"name":"Mediterranean spotted fever","type":"exact"},{"name":"Mediterranean tick fever","type":"exact"},{"name":"Rickettsia conorii spotted fever","type":"broad"},{"name":"South African tick-bite fever","type":"exact"},{"name":"boutonneuse disease","type":"exact"},{"name":"boutonneuse fever","type":"exact"},{"name":"fievre boutonneuse","type":"exact"},{"name":"marseilles fever","type":"exact"},{"name":"tick typhus due to rickettsia conorii","type":"exact"}],"termid":"MONDO:0024472","xrefs":{"Monarch":{"xref_id":"0024472"}}}


id: PBO:0078418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-4","termid":"PBO:0078418"}


id: GO:0018972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving toluene-4-sulfonate, the anion of 4-toluene sulfonic acid, a white crystalline solid which is highly hygroscopic and soluble in water.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"toluene-4-sulfonate metabolic process","secondary_identifiers":["MetaCyc:TOLSULFDEG-PWY","UM-BBD_pathwayID:tsa"],"synonyms":[{"name":"4-methylbenzenesulfonate metabolic process","type":"exact"},{"name":"4-methylbenzenesulfonate metabolism","type":"exact"},{"name":"4-toluenesulfonate metabolic process","type":"exact"},{"name":"4-toluenesulfonate metabolism","type":"exact"},{"name":"toluene-4-sulfonate metabolism","type":"exact"},{"name":"toluene-4-sulphonate metabolic process","type":"exact"},{"name":"toluene-4-sulphonate metabolism","type":"exact"}],"termid":"GO:0018972"}


id: MONDO:0019240
data:
  {"annotated_genes":["SJAG_03024","SJAG_03018","SJAG_04865","SJAG_02855","SJAG_04810","SJAG_03509","SJAG_01474","SJAG_00717"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[88583,88584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[88452,88451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[86910,86909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[87623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014793"},{"annotations":[89050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of sterol biosynthetic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"sterol metabolism disorder","termid":"MONDO:0019256"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01474":null,"SJAG_02855":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03509":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"sterol biosynthesis disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79195","GARD:18969","MEDGEN:1843040","UMLS:C5681287"],"synonyms":[{"name":"inborn error of sterol biosynthetic process","type":"exact"},{"name":"inborn sterol biosynthetic process disorder","type":"exact"},{"name":"rare inborn error of sterol biosynthetic process","type":"exact"}],"termid":"MONDO:0019240","terms_by_termid":{"MONDO:0008974":null,"MONDO:0009849":null,"MONDO:0010035":null,"MONDO:0010621":null,"MONDO:0011816":null,"MONDO:0012481":null,"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0019240"}}}


id: FYPO:0004383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle begins earlier than normal.","definition_xrefs":["PMID:20935472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"premature protein localization to mitotic spindle","synonyms":[{"name":"advanced protein localization to mitotic spindle","type":"exact"},{"name":"precocious protein localization to mitotic spindle","type":"related"},{"name":"premature protein localisation to mitotic spindle","type":"exact"},{"name":"premature protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"premature protein localization to spindle during mitosis","type":"exact"},{"name":"premature protein localization to spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0004383"}


id: PBO:0060635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolin pseudogene 2","termid":"PBO:0060635"}


id: PBO:0053013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 3","termid":"PBO:0053013"}


id: GO:0023059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The positive regulation of a signal transduction pathway in response to a stimulus upon prolonged exposure to that stimulus.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"adaptation of signaling pathway","termid":"GO:0023058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive adaptation of signaling pathway","synonyms":[{"name":"positive adaptation of signalling pathway","type":"exact"}],"termid":"GO:0023059"}


id: PBO:0111890
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-UBR1 type","termid":"PBO:0111890"}


id: GO:0005477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of pyruvate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"},{"relation_name":"is_a","term_name":"pyruvate transmembrane transporter activity","termid":"GO:0050833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"pyruvate secondary active transmembrane transporter activity","synonyms":[{"name":"pyruvate carrier activity","type":"related"}],"termid":"GO:0005477"}


id: PBO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.3.6","termid":"PBO:0002264"}


id: MONDO:0042982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder arising from deficiency in the GATA2 with a wide spectrum of phenotypes. Autosomal dominant mutations of GATA2 cause a haploinsufficiency, which, in consequence, cause individuals to develop hematological, immunological, lymphatic, or other presentations. These often progress to severe organ (e.g. lung) failure, opportunistic infections, myelodysplastic syndrome, and/or acute myeloid leukemia. The most common clinical denominator is the propensity for myeloid neoplasia (myelodysplastic syndrome [MDS], myeloproliferative neoplasms [MPN], chronic myelomonocytic leukemia [CMML], acute myeloid leukemia [AML]).","definition_xrefs":["PMID:25397911","PMID:25619630","PMID:25624456","PMID:28637621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"GATA2 deficiency with susceptibility to MDS/AML","secondary_identifiers":["NCIT:C126349"],"synonyms":[{"name":"GATA2 deficiency","type":"exact"},{"name":"GATA2 deficiency with susceptibility to MDS/AML","type":"exact"},{"name":"GATA2 deficiency/MonoMac syndrome","type":"narrow"}],"termid":"MONDO:0042982","xrefs":{"Monarch":{"xref_id":"0042982"}}}


id: GO:2000307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor (ligand) superfamily member 11 production.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:0072535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of tumor necrosis factor (ligand) superfamily member 11 production","synonyms":[{"name":"regulation of RANKL production","type":"exact"},{"name":"regulation of TNFSF11 production","type":"exact"}],"termid":"GO:2000307"}


id: MONDO:0012166
data:
  {"annotated_genes":["SJAG_01854"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88026],"is_not":false,"summary":null,"term":"MONDO:0012166"}]},"cv_name":"mondo","definition":"Any hereditary ataxia in which the cause of the disease is a mutation in the RNF170 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"sensory ataxia","termid":"MONDO:0100311"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01854":null},"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant sensory ataxia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:332346","UMLS:C1837015","DOID:0111170","OMIM:608984"],"synonyms":[{"name":"ADSA","type":"exact"},{"name":"Adsa","type":"related"},{"name":"RNF170 hereditary ataxia","type":"exact"},{"name":"SNAX1","type":"exact"},{"name":"ataxia, sensory, 1, autosomal dominant","type":"related"},{"name":"hereditary ataxia caused by mutation in RNF170","type":"exact"}],"termid":"MONDO:0012166","terms_by_termid":{"MONDO:0012166":null},"xrefs":{"Monarch":{"xref_id":"0012166"}}}


id: PBO:0040385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit A","termid":"PBO:0040385"}


id: GO:0031942
data:
  {"annotated_genes":["SJAG_00354","SJAG_01816"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79001,120762],"is_not":false,"summary":null,"term":"GO:0031942"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane whose catalytic residues lie on the intermembrane space side of the inner membrane; involved in mitochondrial protein turnover. Contains a subunit belonging to the AAA family of ATP-dependent metalloproteases.","definition_xrefs":["PMID:16247555","PMID:16267274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00354":null,"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"i-AAA complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031942","terms_by_termid":{"GO:0031942":null}}


id: GO:0019668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of amino acids; in these reactions, one amino acid is oxidised (acts as an electron donor) and a different amino acid is reduced (acts as an electron acceptor); oxidation of the electron-donating amino acid yields energy in the form of ATP.","definition_xrefs":["GOC:mah","PMID:13140081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"anaerobic catabolism of pairs of amino acids","synonyms":[{"name":"Stickland reaction","type":"narrow"},{"name":"cofermentation of pairs of amino acids","type":"exact"}],"termid":"GO:0019668"}


id: PBO:0038800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 6 (pseudogene)","termid":"PBO:0038800"}


id: PBO:0039261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 7 family member A1 pseudogene 3","termid":"PBO:0039261"}


id: MOD:00157
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to an L-tryptophan quinone.","definition_xrefs":["DeltaMass:0","PubMed:2028257","RESID:AA0148","Unimod:392#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tryptophyl quinone","synonyms":[{"name":"(2S)-2-amino-3-(6,7-dioxo-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2-amino-3-(6,7-dioxo-6,7-dihydro-1H-indol-3-yl)-propionic acid","type":"exact"},{"name":"3-[(2S)-2-amino-2-carboxyethyl]-6,7-indolinedione","type":"exact"},{"name":"6,7 Dione (from Tryptophan)","type":"exact"},{"name":"L-tryptophyl quinone","type":"exact"},{"name":"MOD_RES Tryptophylquinone","type":"exact"},{"name":"N-(3-carboxy-1-oxopropyl)-L-tryptophan","type":"exact"},{"name":"Quinone","type":"related"},{"name":"TrpQ","type":"exact"},{"name":"quinone","type":"related"}],"termid":"MOD:00157"}


id: PR:O42826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdh1 gene.","definition_xrefs":["UniProtKB:O42826","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pdh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.08c","synonyms":[{"name":"Spom972h-pdh1","type":"exact"}],"termid":"PR:O42826"}


id: PBO:0108555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor Cdt1","termid":"PBO:0108555"}


id: GO:0030832
data:
  {"annotated_genes":["SJAG_04100","SJAG_03086","SJAG_00279","SJAG_02566","SJAG_00521","SJAG_01993","SJAG_04479","SJAG_01894","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80949,77331,94185,82006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[81249,68637,78525,69537,79169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"Any process that controls the length of actin filaments in a cell.","definition_xrefs":["GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"},{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"regulation of actin filament length","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030832","terms_by_termid":{"GO:0030833":null,"GO:0051016":null}}


id: PBO:0048339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 50","termid":"PBO:0048339"}


id: PBO:0049887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 6","termid":"PBO:0049887"}


id: MONDO:0010734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatial visualization, aptitude for","secondary_identifiers":["MESH:C564058","OMIM:313000","MEDGEN:326850","UMLS:C1839262"],"synonyms":[{"name":"Turner syndrome-associated Neurocognitive phenotype","type":"related"},{"name":"Turner syndrome-associated neurocognitive phenotype, X-linked recessive","type":"exact"},{"name":"spatial visualization, aptitude for","type":"exact"},{"name":"visuospatial/perceptual abilities","type":"related"},{"name":"visuospatial/perceptual abilities, X-linked recessive","type":"exact"}],"termid":"MONDO:0010734","xrefs":{"Monarch":{"xref_id":"0010734"}}}


id: PBO:0057083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181b-2","termid":"PBO:0057083"}


id: PBO:0065385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSG11, PSG2 and PSG5 antisense RNA 1","termid":"PBO:0065385"}


id: GO:0120107
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The rotor complex of the bacterial-type flagellum consists of a membrane-anchored ring and the motor switch complex, which participates in the conversion of proton/Na+ energy into the mechanical work of rotation and controls the direction of flagellar rotation.","definition_xrefs":["GOC:cilia","PMID:10572114","PMID:12624192","PMID:25251856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum motor","termid":"GO:0120100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum rotor complex","termid":"GO:0120107"}


id: PATO:0001343
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. pombe mating type determined by the gene configuration on the mat1 locus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yeast mating type","termid":"PATO:0001337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe mating type","termid":"PATO:0001343"}


id: GO:0062107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to a non-growing cell tip.","definition_xrefs":["PMID:18328707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"regulates","term_name":"protein localization to non-growing cell tip","termid":"GO:1902487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to non-growing cell tip","termid":"GO:0062107"}


id: FYPO:0000091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to thiabendazole. Cells stop growing (and may die) at a concentration of thiabendazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to thiabendazole","synonyms":[{"name":"hypersensitive to thiabendazole","type":"exact"},{"name":"sensitive to TBZ","type":"exact"},{"name":"sensitive to thiabendazole during mitotic cell cycle","type":"related"},{"name":"sensitive to thiabendazole during vegetative growth","type":"exact"}],"termid":"FYPO:0000091"}


id: FYPO:0001133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA replication is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA replication","termid":"FYPO:0001133"}


id: MONDO:0018062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"autosomal dominant trichoodontoonychodysplasia-syndactyly","secondary_identifiers":["MESH:C536565","Orphanet:3357","UMLS:C2931239","GARD:5376","MEDGEN:419366"],"synonyms":[{"name":"Tricho-odonto-onychodysplasia with syndactyly","type":"related"},{"name":"Trueb Burg Bottani syndrome","type":"related"},{"name":"Trueb-Burg-Bottani syndrome","type":"exact"},{"name":"ectodermal dysplasia with corkscrew hairs","type":"related"}],"termid":"MONDO:0018062","xrefs":{"Monarch":{"xref_id":"0018062"}}}


id: GO:0006577
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113519,105548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[72692,105549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any betaine, the N-trimethyl derivative of an amino acid.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino-acid betaine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"betaine metabolic process","type":"exact"},{"name":"betaine metabolism","type":"exact"}],"termid":"GO:0006577","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: GO:0014040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell differentiation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell differentiation","termid":"GO:0014038"},{"relation_name":"is_a","term_name":"positive regulation of glial cell differentiation","termid":"GO:0045687"},{"relation_name":"positively_regulates","term_name":"Schwann cell differentiation","termid":"GO:0014037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell differentiation","synonyms":[{"name":"activation of Schwann cell differentiation","type":"narrow"},{"name":"stimulation of Schwann cell differentiation","type":"narrow"},{"name":"up regulation of Schwann cell differentiation","type":"exact"},{"name":"up-regulation of Schwann cell differentiation","type":"exact"},{"name":"upregulation of Schwann cell differentiation","type":"exact"}],"termid":"GO:0014040"}


id: PBO:0113276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein of unknown function; targeted to vacuole via AP-3 pathway; truncation and overexpression suppresses lethality of G-alpha protein deficiency","termid":"PBO:0113276"}


id: PR:O13991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26H5.09c gene.","definition_xrefs":["UniProtKB:O13991","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C26H5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.09c","synonyms":[{"name":"Spom972h-SPAC26H5.09c","type":"exact"}],"termid":"PR:O13991"}


id: PBO:0090516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxy-acid dehydratase Ilv3","termid":"PBO:0090516"}


id: PBO:0012826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-removed_during","termid":"PBO:0012826"}


id: MONDO:1010592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperparathyroidism that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperparathyroidism, non-human animal","termid":"MONDO:1010054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism, domestic cat","secondary_identifiers":["OMIA:000508-9685"],"termid":"MONDO:1010592","xrefs":{"Monarch":{"xref_id":"1010592"}}}


id: PBO:0016910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug103","termid":"PBO:0016910"}


id: PBO:0051643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 2","termid":"PBO:0051643"}


id: MOD:01392
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-asparagine residue, and C-4 methylates to form L-asparagine 5-methylthiazole-4-carboxylic acid.","definition_xrefs":["PubMed:10625477","RESID:AA0469","PubMed:1880060","PubMed:7844053"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"C-methylated residue","termid":"MOD:00656"},{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-asparagine 5-methylthiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,3-bisazanyl-3-oxopropyl]-5-methyl-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S)-1,3-diamino-3-oxopropyl]-5-methyl-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methylthiazole-4-carboxylic acid (Asn-Cys)","type":"exact"},{"name":"L-asparagine 5-methylthiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01392"}


id: MONDO:0018483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of pulmonary alveolar proteinosis that arises in association with hematological disorders, medications, certain infections, acute silicosis, and immunodeficiency.","definition_xrefs":["PMID:19465834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary alveolar proteinosis","termid":"MONDO:0001437"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary pulmonary alveolar proteinosis","secondary_identifiers":["NANDO:1200749","Orphanet:420259","MEDGEN:845105","SCTID:707510005","UMLS:C3873302","GARD:21744","icd11.foundation:1480338606"],"synonyms":[{"name":"SPAP","type":"exact"},{"name":"secondary PAP","type":"exact"}],"termid":"MONDO:0018483","xrefs":{"Monarch":{"xref_id":"0018483"}}}


id: GO:2000239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tRNA export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA export from nucleus","termid":"GO:0046832"},{"relation_name":"is_a","term_name":"negative regulation of ribonucleoprotein complex localization","termid":"GO:2000198"},{"relation_name":"is_a","term_name":"regulation of tRNA export from nucleus","termid":"GO:2000238"},{"relation_name":"negatively_regulates","term_name":"tRNA export from nucleus","termid":"GO:0006409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tRNA export from nucleus","synonyms":[{"name":"negative regulation of tRNA export from cell nucleus","type":"exact"},{"name":"negative regulation of tRNA export out of nucleus","type":"exact"},{"name":"negative regulation of tRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of tRNA-nucleus export","type":"exact"}],"termid":"GO:2000239"}


id: GO:0038179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by neurotrophin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Neurotrophins are a family of secreted growth factors that induce the survival, development, and function of neurons.","definition_xrefs":["GOC:jc","PMID:17466268","Wikipedia:Neurotrophin","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neurotrophin signaling pathway","synonyms":[{"name":"neurotrophin receptor signaling pathway","type":"exact"}],"termid":"GO:0038179"}


id: PBO:0088607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Der1-like (degradation in the ER) family","termid":"PBO:0088607"}


id: GO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions that occur in living organisms that result in an increase in the mass (size) of a cell.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolic process resulting in cell growth (obsolete GO:0001557)","synonyms":[{"name":"metabolic process resulting in cell growth","type":"exact"}],"termid":"GO:0001557"}


id: GO:0044168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The irregular network of unit membranes, visible only by electron microscopy, that occurs in the host cell cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The host rough ER has ribosomes adhering to the outer surface.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell rough endoplasmic reticulum","synonyms":[{"name":"host rough endoplasmic reticulum","type":"exact"}],"termid":"GO:0044168"}


id: PBO:0091565
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-Like Protein","termid":"PBO:0091565"}


id: GO:1903302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pyruvate kinase activity.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000059","PMID:15804508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pyruvate kinase activity","synonyms":[{"name":"regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"regulation of phosphoenolpyruvate kinase activity","type":"exact"}],"termid":"GO:1903302"}


id: GO:0030886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of myeloid dendritic cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell activation","termid":"GO:0030885"},{"relation_name":"negatively_regulates","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid dendritic cell activation","synonyms":[{"name":"down regulation of myeloid dendritic cell activation","type":"exact"},{"name":"down-regulation of myeloid dendritic cell activation","type":"exact"},{"name":"downregulation of myeloid dendritic cell activation","type":"exact"},{"name":"inhibition of myeloid dendritic cell activation","type":"narrow"}],"termid":"GO:0030886"}


id: PBO:0073487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGO1 antisense RNA 1","termid":"PBO:0073487"}


id: GO:0071431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains transfer RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071431)","synonyms":[{"name":"tRNA-containing RNP export from nucleus","type":"exact"},{"name":"tRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"tRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"tRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071431"}


id: PBO:0077995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha constant","termid":"PBO:0077995"}


id: GO:0035368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a selenocysteine insertion sequence (SECIS), a regulatory sequence within mRNA which directs incorporation of a selenocysteine at a stop codon (UGA) during translation.","definition_xrefs":["PMID:10760958","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"selenocysteine insertion sequence binding","secondary_identifiers":["Reactome:R-HSA-2408529"],"synonyms":[{"name":"SECIS binding","type":"exact"}],"termid":"GO:0035368"}


id: PBO:0051449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 4-69","termid":"PBO:0051449"}


id: PBO:0072906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory carrier membrane protein 4","termid":"PBO:0072906"}


id: GO:0002451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of mature B cells in the peripheral lymphoid tissues: the blood, lymph nodes, spleen, and mucosal-associated lymphoid tissue.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"},{"relation_name":"is_a","term_name":"B cell tolerance induction","termid":"GO:0002514"},{"relation_name":"is_a","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral B cell tolerance induction","synonyms":[{"name":"peripheral B lymphocyte tolerance induction","type":"exact"},{"name":"peripheral B-cell tolerance induction","type":"exact"},{"name":"peripheral B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002451"}


id: PBO:0046703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 3","termid":"PBO:0046703"}


id: PBO:0088421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk9","termid":"PBO:0088421"}


id: MONDO:0005693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cauda equina syndrome refers to a group of symptoms that occur when some of the nerves in the cauda equina (the bundle of nerves that spread out from the bottom of the spinal cord) become compressed and/or damaged. Signs and symptoms of this condition include pain, numbness, or tingling in the lower back and/or legs; ' foot drop '; problems with bowel and/or bladder control; and sexual dysfunction. Cauda equina syndrome may be caused by a herniated disk, tumor, infection, fracture, or spinal stenosis. Treatment usually targets the underlying cause of the condition and often includes surgery to remove the material that is pressing on the nerves. Physical therapy, occupational therapy, and/or other services may be required if symptoms persist following surgery.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauda equina syndrome","secondary_identifiers":["SCTID:192970008","NCIT:C35436","MEDGEN:98229","UMLS:C0392548","DOID:11577","ICD9:344.6","MESH:D000077684","EFO:0007196","MESH:D011128","icd11.foundation:1490265028","ICD10CM:G83.4"],"synonyms":[{"name":"cauda equina syndromic disease","type":"exact"},{"name":"syndromic disease of cauda equina","type":"exact"}],"termid":"MONDO:0005693","xrefs":{"Monarch":{"xref_id":"0005693"}}}


id: GO:0047124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,5S)-3,5-diaminohexanoate + H2O + NAD+ = (S)-5-amino-3-oxo-hexanoate + H+ + NADH + NH4.","definition_xrefs":["RHEA:19633","EC:1.4.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-erythro-3,5-diaminohexanoate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.4.1.11-RXN","KEGG_REACTION:R03349"],"synonyms":[{"name":"L-3,5-diaminohexanoate dehydrogenase activity","type":"related"},{"name":"L-erythro-3,5-diaminohexanoate:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0047124"}


id: PBO:0078003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 3","termid":"PBO:0078003"}


id: PBO:0002514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dihydrouridine synthase Dus3 (predicted)","termid":"PBO:0002514"}


id: PBO:0018078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper of TIM Hot15 (predicted)","termid":"PBO:0018078"}


id: PATO:0000539
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000539 drought sensitivity value (obsolete PATO:0000539)","termid":"PATO:0000539"}


id: PBO:0062543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily I member 2 pseudogene","termid":"PBO:0062543"}


id: PBO:0031600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_anaphase","termid":"PBO:0031600"}


id: PBO:0075928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 20","termid":"PBO:0075928"}


id: MONDO:0031432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone metabolism, abnormal","secondary_identifiers":["UMLS:C1864761","OMIMPS:609698","MEDGEN:355288"],"termid":"MONDO:0031432","xrefs":{"Monarch":{"xref_id":"0031432"}}}


id: MONDO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opportunistic bacterial infectious disease","secondary_identifiers":["DOID:0050340"],"termid":"MONDO:0000316","xrefs":{"Monarch":{"xref_id":"0000316"}}}


id: GO:0008911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactaldehyde + NAD+ + H2O = (S)-lactate + NADH + H+.","definition_xrefs":["RHEA:14277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"lactaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:LACTALDDEHYDROG-RXN","EC:1.2.1.22"],"synonyms":[{"name":"(S)-lactaldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"L-lactaldehyde:NAD oxidoreductase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide (NAD)-linked dehydrogenase activity","type":"related"}],"termid":"GO:0008911"}


id: PBO:0056938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-3","termid":"PBO:0056938"}


id: PBO:0005803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit YmL33 (predicted)","termid":"PBO:0005803"}


id: GO:0036136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-kynurenine + 2-oxoglutarate = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-aspartate.","definition_xrefs":["PMID:15606768","PMID:4149765","GOC:pde"],"gene_count":0,"genotype_count":0,"name":"obsolete kynurenine-oxaloacetate transaminase activity (obsolete GO:0036136)","synonyms":[{"name":"L-kynurenine-oxaloacetate transaminase activity","type":"exact"}],"termid":"GO:0036136"}


id: PBO:0058994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein MLX","termid":"PBO:0058994"}


id: PBO:0066887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 187","termid":"PBO:0066887"}


id: PBO:0064834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 11","termid":"PBO:0064834"}


id: PBO:0063340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEST proteolytic signal containing nuclear protein","termid":"PBO:0063340"}


id: PBO:0065961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23B pseudogene 3","termid":"PBO:0065961"}


id: PBO:0065409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 7","termid":"PBO:0065409"}


id: PBO:0069468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 733, pseudogene","termid":"PBO:0069468"}


id: PBO:0072212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 11","termid":"PBO:0072212"}


id: PBO:0034073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_many_to_many_homology_relationship_with","termid":"PBO:0034073"}


id: PATO:0001273
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of grey color and high saturation.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001273 bright grey (obsolete PATO:0001273)","termid":"PATO:0001273"}


id: PBO:0080740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWTR1 antisense RNA 1","termid":"PBO:0080740"}


id: MOD:00706
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts L-tyrosine to 2,3-didehydrotyrosine.","definition_xrefs":["Unimod:401#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenated tyrosine","synonyms":[{"name":"MOD_RES 2,3-didehydrotyrosine","type":"exact"},{"name":"dHTyr","type":"exact"}],"termid":"MOD:00706"}


id: PATO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000067 relative pilosity (obsolete PATO:0000067)","termid":"PATO:0000067"}


id: PBO:0091855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P1 Rpp102","termid":"PBO:0091855"}


id: PBO:0065445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC3 interacting protein","termid":"PBO:0065445"}


id: PBO:0028795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_mating-type_region_replication_fork_barrier","termid":"PBO:0028795"}


id: FYPO:0005387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of eukaryotic translation initiation factor 2B complex assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased eukaryotic translation initiation factor 2B complex assembly","synonyms":[{"name":"decreased eIF-2B assembly","type":"exact"},{"name":"decreased eIF-2B formation","type":"exact"},{"name":"decreased eif2B assembly","type":"exact"},{"name":"decreased eukaryotic translation initiation factor 2B complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased eukaryotic translation initiation factor 2B complex assembly during vegetative growth","type":"exact"},{"name":"reduced eukaryotic translation initiation factor 2B complex assembly","type":"exact"}],"termid":"FYPO:0005387"}


id: MONDO:0003508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor arising from the testis. It represents the rarest of the testicular germ cell tumors. Histologically it is characterized by the presence of syncytiotrophoblasts and cytotrophoblasts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular trophoblastic tumor","termid":"MONDO:0002871"},{"relation_name":"is_a","term_name":"testicular non-seminomatous germ cell cancer","termid":"MONDO:0003403"},{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"choriocarcinoma of testis","secondary_identifiers":["UMLS:C0238449","NCIT:C7733","DOID:5551","EFO:1000564","MEDGEN:65969","icd11.foundation:1972827817","ONCOTREE:TCCA"],"synonyms":[{"name":"choriocarcinoma","type":"related"},{"name":"choriocarcinoma of testis","type":"exact"},{"name":"choriocarcinoma of the testis","type":"exact"},{"name":"testicular choriocarcinoma","type":"exact"},{"name":"testis choriocarcinoma (disease)","type":"exact"}],"termid":"MONDO:0003508","xrefs":{"Monarch":{"xref_id":"0003508"}}}


id: PBO:0073256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPTIN7 divergent transcript","termid":"PBO:0073256"}


id: GO:1900578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gerfelin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"gerfelin metabolic process","termid":"GO:1900576"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"gerfelin biosynthetic process","synonyms":[{"name":"gerfelin anabolism","type":"exact"},{"name":"gerfelin biosynthesis","type":"exact"},{"name":"gerfelin formation","type":"exact"},{"name":"gerfelin synthesis","type":"exact"}],"termid":"GO:1900578"}


id: PBO:0055480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2913","termid":"PBO:0055480"}


id: GO:0045225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of CD4.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of CD4 production (obsolete GO:0045225)","synonyms":[{"name":"down regulation of CD4 biosynthetic process","type":"exact"},{"name":"down-regulation of CD4 biosynthetic process","type":"exact"},{"name":"downregulation of CD4 biosynthetic process","type":"exact"},{"name":"inhibition of CD4 biosynthetic process","type":"narrow"},{"name":"negative regulation of CD4 anabolism","type":"exact"},{"name":"negative regulation of CD4 biosynthesis","type":"exact"},{"name":"negative regulation of CD4 biosynthetic process","type":"exact"},{"name":"negative regulation of CD4 formation","type":"exact"},{"name":"negative regulation of CD4 synthesis","type":"exact"}],"termid":"GO:0045225"}


id: PBO:0012041
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lives if zapped","termid":"PBO:0012041"}


id: PBO:0038503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 12","termid":"PBO:0038503"}


id: GO:0036095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of invasive growth as a result of deprivation of glucose, by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:jh","PMID:14668363"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invasive growth in response to glucose limitation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0036095)","synonyms":[{"name":"transcriptional activation of genes involved in invasive growth","type":"related"}],"termid":"GO:0036095"}


id: GO:1901969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of polynucleotide 3'-phosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:23316050"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of polynucleotide 3'-phosphatase activity (obsolete GO:1901969)","synonyms":[{"name":"activation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"activation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"activation of DNA 3'-phosphatase activity","type":"exact"},{"name":"activation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"activation of polynucleotide 3'-phosphatase activity","type":"narrow"},{"name":"activation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"positive regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"positive regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"up regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"up regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"up regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"up regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"up regulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"up regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"up-regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"up-regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"upregulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"upregulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"upregulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"upregulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"upregulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"upregulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"}],"termid":"GO:1901969"}


id: PBO:0084736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; forms a complex with Tim13p that delivers a subset of hydrophobic proteins to the TIM22 complex for inner membrane insertion; homolog of human TIMM8A, implicated in Mohr-Tranebjaerg syndrome, also known as deafness-dystonia-optic neuronopathy (DDON) syndrome; human TIMM8A can complement yeast null mutant","termid":"PBO:0084736"}


id: GO:0034897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-(1-ethyl-1,4-dimethyl-pentyl)phenol + O2 + 2 H+ + 2 e- = hydroquinone + 3,6-dimethylheptan-3-ol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-(1-ethyl-1,4-dimethyl-pentyl)phenol monooxygenase activity (obsolete GO:0034897)","termid":"GO:0034897"}


id: GO:0004454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose = ADP + D-fructose 1-phosphate.","definition_xrefs":["EC:2.7.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"ketohexokinase activity","secondary_identifiers":["Reactome:R-HSA-5656459","MetaCyc:KETOHEXOKINASE-RXN","Reactome:R-HSA-70333","RHEA:18145"],"synonyms":[{"name":"ATP:D-fructose 1-phosphotransferase activity","type":"related"},{"name":"hepatic fructokinase activity","type":"narrow"},{"name":"ketohexokinase (phosphorylating)","type":"related"}],"termid":"GO:0004454"}


id: MONDO:0859311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, demyelinating, type 1J","secondary_identifiers":["OMIM:620111","UMLS:C5774249","MEDGEN:1824022"],"termid":"MONDO:0859311","xrefs":{"Monarch":{"xref_id":"0859311"}}}


id: PBO:0062067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily A member 5 pseudogene","termid":"PBO:0062067"}


id: GO:0102301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: malonyl-CoA + gamma-linolenoyl-CoA + H+ = (8Z,11Z,14Z)-3-oxoicosa-8,11,14-trienoyl-CoA + coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-linolenate elongase activity (obsolete GO:0102301)","termid":"GO:0102301"}


id: PBO:0087731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Shu complex (aka PCSS complex); Shu complex also includes Psy3, Shu1, Shu2, and promotes error-free DNA repair; Shu complex mediates inhibition of Srs2p anti-recombinase function; promotes formation of Rad51p filaments; Psy3p and Csm2p contain similar DNA-binding regions which work together to form a single DNA binding site; required for accurate chromosome segregation during meiosis","termid":"PBO:0087731"}


id: GO:1903670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sprouting angiogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16756958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"regulates","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sprouting angiogenesis","termid":"GO:1903670"}


id: PBO:0028142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_oxidative_stress","termid":"PBO:0028142"}


id: GO:0008039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuronal cell in a multicellular organism interprets signals produced by potential target cells, with which it may form synapses.","definition_xrefs":["GOC:mah","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron recognition","termid":"GO:0008038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptic target recognition","synonyms":[{"name":"neuronal targeting","type":"exact"}],"termid":"GO:0008039"}


id: MONDO:1010791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tricho-dento-osseous-like syndrome that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricho-dento-osseous-like syndrome, non-human animal","termid":"MONDO:1010149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricho-dento-osseous-like syndrome, cattle","secondary_identifiers":["OMIA:002109-9913"],"termid":"MONDO:1010791","xrefs":{"Monarch":{"xref_id":"1010791"}}}


id: PBO:0046473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELKS/RAB6-interacting/CAST family member 1","termid":"PBO:0046473"}


id: PBO:0089622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp18","termid":"PBO:0089622"}


id: RO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of,_positive_effect","termid":"RO:0002304"}


id: GO:0008907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the integration of one DNA segment into another.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"integrase activity","secondary_identifiers":["Reactome:R-HSA-164523"],"termid":"GO:0008907"}


id: GO:0044543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with the proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in zymogen activation in another organism (obsolete GO:0044543)","synonyms":[{"name":"envenomation resulting in zymogen activation in other organism","type":"exact"}],"termid":"GO:0044543"}


id: MONDO:0014645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"BENTA disease (B cell Expansion with N F-N:B and T cell Anergy) is a very rare congenital immune deficiency disorder. The main symptoms include spleen enlargement (splenomegalia) and frequent ear, sinus, and lung infections early in life. Some patients can present with molluscum contagiosum or chronic Epstein-Barr virus (EBV) infection. Blood exams show alterations of several immune cells with very high numbers of polyclonal B cell lymphocytos (above 2200/N<l) and few memory B cells. Other findings are low levels of IgM in blood and poor antibody responses to specific vaccines. BENTA disease is caused by mutations in the CARD11 gene. There is no established treatment, but some patients have their spleen removed and there is one case of a hematopoietic stem cell transplantation with good results.","definition_xrefs":["GARD:0013339"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"BENTA disease","secondary_identifiers":["Orphanet:464336","OMIM:616452","MEDGEN:1641265","UMLS:C4551967","GARD:13339"],"synonyms":[{"name":"B-cell expansion with NF-kB and T-cell anergy disease","type":"exact"},{"name":"B-cell expansion with NFKB and T-cell anergy","type":"related"},{"name":"BENTA","type":"related"}],"termid":"MONDO:0014645","xrefs":{"Monarch":{"xref_id":"0014645"}}}


id: MONDO:0020316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute myelomonocytic leukemia (AMML) is a cancer that typically develops in the bone marrow and blood of older individuals.AMML is one type of acute myeloid leukemia, a group of blood cancers that occur when the amount of white blood cells increases rapidly. Symptoms of AMML often include fatigue (due to anemia) or easy bruising or bleeding (due to thrombocytopenia). The cause of AMML is currently unknown. Treatment typically consists of chemotherapy.","direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia with abnormal bone marrow eosinophils inv(16)(p13q22) or t(16;16)(p13;q22)","secondary_identifiers":["MEDGEN:1716406","UMLS:C5395080","NCIT:C9287","Orphanet:98829","GARD:536","icd11.foundation:808954959"],"synonyms":[{"name":"AML with abnormal bone marrow eosinophils inv(16)(p13q22) or t(16;16)(p13;q22)","type":"exact"},{"name":"AML with inv(16)(p13.1q22) or t(16;16)(p13.1;q22)","type":"related"},{"name":"CBFB-MYH11","type":"related"},{"name":"acute myelomonocytic leukaemia","type":"related"},{"name":"acute myelomonocytic leukemia","type":"related"}],"termid":"MONDO:0020316","xrefs":{"Monarch":{"xref_id":"0020316"}}}


id: MONDO:0013153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the IL10RA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IL10-related early-onset inflammatory bowel disease","termid":"MONDO:0016542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 28","secondary_identifiers":["DOID:0110899","MEDGEN:442630","NANDO:2200447","MESH:C567728","OMIM:613148","UMLS:C2751053","NCIT:C164676","GARD:18343"],"synonyms":[{"name":"IBD28","type":"exact"},{"name":"IL10RA inflammatory bowel disease","type":"exact"},{"name":"early onset autosomal recessive inflammatory bowel disease 28","type":"exact"},{"name":"inflammatory bowel disease 28","type":"exact"},{"name":"inflammatory bowel disease 28, autosomal recessive","type":"exact"},{"name":"inflammatory bowel disease 28, early onset, autosomal recessive","type":"exact"},{"name":"inflammatory bowel disease caused by mutation in IL10RA","type":"exact"},{"name":"inflammatory bowel disease type 28","type":"exact"},{"name":"inflammatory bowel disease, early-onset, autosomal recessive","type":"exact"}],"termid":"MONDO:0013153","xrefs":{"Monarch":{"xref_id":"0013153"}}}


id: PBO:0048651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 2","termid":"PBO:0048651"}


id: PBO:0059145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPL proto-oncogene, thrombopoietin receptor","termid":"PBO:0059145"}


id: FYPO:0001347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any nucleic acid metabolic process in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype","termid":"FYPO:0000292"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"nucleic acid metabolism phenotype during vegetative growth","synonyms":[{"name":"fission yeast nucleic acid metabolism phenotype during vegetative growth","type":"exact"},{"name":"nucleic acid metabolism phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001347"}


id: FYPO:0001189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cilofungin. Cells stop growing (and may die) at a concentration of cilofungin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to echinocandin","termid":"FYPO:0007947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cilofungin","synonyms":[{"name":"hypersensitive to cilofungin","type":"exact"},{"name":"sensitive to cilofungin during mitotic cell cycle","type":"related"},{"name":"sensitive to cilofungin during vegetative growth","type":"exact"}],"termid":"FYPO:0001189"}


id: PBO:0047734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 4","termid":"PBO:0047734"}


id: PBO:0087324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Soluble fumarate reductase; required with isoenzyme Osm1p for anaerobic growth; may interact with ribosomes, based on co-purification experiments; authentic, non-tagged protein is detected in purified mitochondria in high-throughput studies; similar to Arxula adeninovorans fumarate reductase; protein abundance increases in response to DNA replication stress; FRD1 has a paralog, OSM1, that arose from the whole genome duplication","termid":"PBO:0087324"}


id: PBO:0111771
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box","termid":"PBO:0111771"}


id: GO:0034978
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the homeodomain proteins PDX1, PBX1b and MRG1 (MEIS2) and is involved in the transcriptional regulation of pancreatic acinar cell-specific genes.","definition_xrefs":["PMID:9710595","PMID:11279116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"PDX1-PBX1b-MRG1 complex","synonyms":[{"name":"acinar cell-specific C complex","type":"exact"}],"termid":"GO:0034978"}


id: GO:0061625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructose into pyruvate through a fructose-1-phosphate intermediate, with the concomitant production of ATP and NADH.","definition_xrefs":["GOC:dph","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose catabolic process","termid":"GO:0006001"},{"relation_name":"is_a","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0055086","GO:0006091","GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycolytic process through fructose-1-phosphate","secondary_identifiers":["MetaCyc:PWY-8404"],"termid":"GO:0061625"}


id: PBO:0073707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI/DACH domain containing 1","termid":"PBO:0073707"}


id: PBO:0079676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 W pseudogene 1","termid":"PBO:0079676"}


id: MONDO:0001209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A wart caused by human papillomavirus. It can appear anywhere on the skin.","definition_xrefs":["NCIT:C27087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"},{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"common wart","secondary_identifiers":["EFO:0009662","MEDGEN:777120","DOID:11165","ICD9:078.19","ICD9:078.1","MESH:D014860","SCTID:57019003","UMLS:C3665596","ICD9:078.10"],"synonyms":[{"name":"common wart","type":"exact"},{"name":"verruca vulgaris","type":"exact"},{"name":"viral Warts","type":"related"},{"name":"viral Warts due to papilloma virus","type":"related"},{"name":"viral wart","type":"related"},{"name":"wart","type":"related"}],"termid":"MONDO:0001209","xrefs":{"Monarch":{"xref_id":"0001209"}}}


id: MONDO:0020129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of motor neuron disease that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor neuron disorder","termid":"MONDO:0020128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"acquired motor neuron disease","secondary_identifiers":["GARD:19479","MEDGEN:1842733","UMLS:C5680367","Orphanet:98506"],"synonyms":[{"name":"acquired anterior horn cell disease","type":"exact"},{"name":"acquired motor neuron disease","type":"exact"}],"termid":"MONDO:0020129","xrefs":{"Monarch":{"xref_id":"0020129"}}}


id: PBO:0057388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548BC","termid":"PBO:0057388"}


id: PBO:0089643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein","termid":"PBO:0089643"}


id: GO:0048530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a fruit are generated and organized. A fruit is a reproductive body of a seed plant.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"fruit development","termid":"GO:0010154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit morphogenesis","termid":"GO:0048530"}


id: MONDO:0017678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease in which punctate palmoplantar keratoderma is a major feature..","gene_count":0,"genotype_count":0,"name":"obsolete obsolete disease with punctate palmoplantar keratoderma as a major feature (obsolete MONDO:0017678)","secondary_identifiers":["Orphanet:308023"],"synonyms":[{"name":"disease with punctate palmoplantar hyperkeratosis as a major feature","type":"exact"}],"termid":"MONDO:0017678","xrefs":{"Monarch":{"xref_id":"0017678"}}}


id: PBO:0073542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3RF3 antisense RNA 1","termid":"PBO:0073542"}


id: PBO:0054951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2365","termid":"PBO:0054951"}


id: GO:0015142
data:
  {"annotated_genes":["SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of tricarboxylic acids from one side of a membrane to the other. Tricarboxylic acid are organic acids with three COOH groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"tricarboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-75849","Reactome:R-HSA-372449"],"synonyms":[{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"narrow"}],"termid":"GO:0015142","terms_by_termid":{"GO:0071913":null}}


id: PBO:0113264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide binding protein; required for vesicle formation in autophagy and the cytoplasm-to-vacuole targeting (CVT) pathway; binds PtdIns(3,5)P2, PI3P and PI4P; WD-40 repeat-containing protein and PROPPIN family member; relocalizes from the vacuole to cytoplasm upon replication stress; forms higher order helical assemblies; mammalian homologs include: WIPI1, WIPI2, WIPI3 and WDR45; human WDR45 mutations cause static encephalopathy of childhood with neurodegeneration in adulthood (SENDA)","termid":"PBO:0113264"}


id: GO:1905146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular protein catabolic process that takes place in a lysosome.","definition_xrefs":["PMID:24334770","GOC:TermGenie","GO_REF:0000062","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process in the vacuole","termid":"GO:0007039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"lysosomal protein catabolic process","synonyms":[{"name":"cellular protein breakdown in lysosome","type":"exact"},{"name":"cellular protein catabolic process in lysosome","type":"exact"},{"name":"cellular protein catabolism in lysosome","type":"exact"},{"name":"cellular protein degradation in lysosome","type":"exact"},{"name":"lysosomal protein catabolism","type":"exact"},{"name":"lysosomal protein degradation","type":"exact"},{"name":"lysosomal proteolysis","type":"related"},{"name":"proteolysis within lysosome","type":"related"}],"termid":"GO:1905146"}


id: GO:0097131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D1 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D1-CDK6 complex","termid":"GO:0097131"}


id: GO:0018956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenanthrene, a tricyclic aromatic hydrocarbon, where trans-9(R),10(R)-dihydrodiolphenanthrene is the principal intermediate metabolite.","definition_xrefs":["UM-BBD_pathwayID:pha3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene catabolic process","termid":"GO:0042216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenanthrene catabolic process via trans-9(R),10(R)-dihydrodiolphenanthrene","synonyms":[{"name":"phenanthrene breakdown via trans-9(R),10(R)-dihydrodiolphenanthrene","type":"exact"},{"name":"phenanthrene degradation via trans-9(R),10(R)-dihydrodiolphenanthrene","type":"exact"}],"termid":"GO:0018956"}


id: MONDO:0021150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic characteristic (obsolete MONDO:0021150)","termid":"MONDO:0021150","xrefs":{"Monarch":{"xref_id":"0021150"}}}


id: PBO:0057805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3127","termid":"PBO:0057805"}


id: GO:0042683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a compound eye cone cell.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of compound eye cone cell fate specification","termid":"GO:0042682"},{"relation_name":"negatively_regulates","term_name":"compound eye cone cell fate specification","termid":"GO:0042679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye cone cell fate specification","secondary_identifiers":["GO:0010000"],"synonyms":[{"name":"down regulation of cone cell fate specification","type":"broad"},{"name":"down-regulation of cone cell fate specification","type":"broad"},{"name":"downregulation of cone cell fate specification","type":"broad"},{"name":"inhibition of cone cell fate specification","type":"broad"},{"name":"suppression of cone cell fate","type":"broad"}],"termid":"GO:0042683"}


id: FYPO:0002066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has no septum, is elongated, and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated aseptate vegetative cell","termid":"FYPO:0000950"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable aseptate vegetative cell","termid":"FYPO:0003931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0000005"],"is_obsolete":false,"name":"inviable elongated aseptate cell","synonyms":[{"name":"inviable elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated aseptate cell during vegetative growth","type":"exact"},{"name":"inviable long aseptate cell","type":"exact"},{"name":"lethal; elongated aseptate cell","type":"exact"}],"termid":"FYPO:0002066"}


id: PBO:0086374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl-alcohol dehydrogenase; similar to P. chrysosporium aryl-alcohol dehydrogenase; mutational analysis has not yet revealed a physiological role; AAD3 has a paralog, AAD15, that arose from a segmental duplication; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086374"}


id: MONDO:0020397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parachute tricuspid valve is a rare congenital heart malformation defined as an insertion of the chordal apparatus into a single papillary muscle or a muscle group, making a pathognomonic 'pear' shape sign in the four-chamber echocardiographic view with the atrium forming the larger base of the pear and the leaflets the apex. Isolated parachute tricuspid valve may be asymptomatic or present with symptoms of tricuspid stenosis (diastolic inspiratory murmur, pulsation of jugular veins, hepatomegaly, edema, epigastric discomfort, right atrial enlargement, right ventricular hypertrophy, electrocardiography abnormalities). It may also be associated with other heart malformations and present with symptoms of the complex of malformations.","definition_xrefs":["Orphanet:99056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"parachute tricuspid valve","secondary_identifiers":["MEDGEN:576478","UMLS:C0344755","GARD:19624"],"termid":"MONDO:0020397","xrefs":{"Monarch":{"xref_id":"0020397"}}}


id: GO:0018933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["ISBN:0198547684","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine metabolic process","synonyms":[{"name":"nicotine metabolism","type":"exact"}],"termid":"GO:0018933"}


id: GO:0014014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gliogenesis","termid":"GO:0014013"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"negatively_regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of gliogenesis","synonyms":[{"name":"down regulation of gliogenesis","type":"exact"},{"name":"down-regulation of gliogenesis","type":"exact"},{"name":"downregulation of gliogenesis","type":"exact"},{"name":"inhibition of gliogenesis","type":"narrow"}],"termid":"GO:0014014"}


id: GO:0006452
data:
  {"annotated_genes":["SJAG_02189","SJAG_02812","SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67831,70310],"is_not":false,"summary":null,"term":"GO:0006452"},{"annotations":[77140],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001125"}]},"cv_name":"biological_process","definition":"A mechanism whereby different proteins may result from a single mRNA molecule, due to a change in the parsing of three nucleotides per codon relative to an initiating AUG codon.","definition_xrefs":["GOC:hjd","ISBN:0195094425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02812":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translational frameshifting","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Translational_frameshift"],"termid":"GO:0006452","terms_by_termid":{"GO:0006452":null,"GO:2001125":null}}


id: MONDO:0016093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade epithelial tumor arising from the ovary. It is characterized by an atypical proliferation of epithelial cells. There is no evidence of stromal invasion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"},{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borderline epithelial tumor of ovary","secondary_identifiers":["GARD:9363","MEDGEN:777110","NCIT:C4783","SCTID:764791008","UMLS:C3665489","EFO:1000140","Orphanet:206473"],"synonyms":[{"name":"borderline epithelial neoplasm of ovary","type":"exact"},{"name":"borderline epithelial neoplasm of the ovary","type":"exact"},{"name":"borderline epithelial tumor of ovary","type":"exact"},{"name":"borderline epithelial tumor of the ovary","type":"exact"},{"name":"borderline epithelial tumour of the ovary","type":"exact"},{"name":"borderline ovarian epithelial neoplasm","type":"exact"},{"name":"borderline ovarian epithelial tumor","type":"exact"},{"name":"borderline ovarian epithelial tumour","type":"exact"},{"name":"borderline ovarian surface epithelial-stromal tumor","type":"exact"},{"name":"borderline ovarian surface epithelial-stromal tumour","type":"exact"},{"name":"epithelial neoplasm of ovary of borderline malignancy","type":"exact"},{"name":"epithelial neoplasm of the ovary of borderline malignancy","type":"exact"},{"name":"epithelial ovarian neoplasm of borderline malignancy","type":"exact"},{"name":"epithelial ovarian tumor of borderline malignancy","type":"exact"},{"name":"epithelial ovarian tumour of borderline malignancy","type":"exact"},{"name":"epithelial tumor of ovary of borderline malignancy","type":"exact"},{"name":"epithelial tumor of the ovary of borderline malignancy","type":"exact"},{"name":"epithelial tumour of ovary of borderline malignancy","type":"exact"},{"name":"epithelial tumour of the ovary of borderline malignancy","type":"exact"},{"name":"low malignant potential ovarian tumor","type":"exact"},{"name":"low malignant potential ovarian tumour","type":"exact"},{"name":"ovarian borderline malignant tumor","type":"exact"},{"name":"ovarian borderline malignant tumour","type":"exact"},{"name":"ovarian low malignant potential tumor","type":"exact"},{"name":"ovarian low malignant potential tumour","type":"exact"},{"name":"ovarian tum. of low malig. poten.","type":"exact"},{"name":"ovarian tumor of low malignant potential","type":"exact"},{"name":"ovarian tumors of low malignant potential","type":"exact"},{"name":"ovarian tumour of low malignant potential","type":"exact"},{"name":"ovarian tumours of low malignant potential","type":"exact"}],"termid":"MONDO:0016093","xrefs":{"Monarch":{"xref_id":"0016093"}}}


id: GO:0046850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone remodeling, the processes of bone formation and resorption that combine to maintain skeletal integrity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone remodeling","synonyms":[{"name":"regulation of bone remodelling","type":"exact"}],"termid":"GO:0046850"}


id: GO:0048240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium.","definition_xrefs":["PMID:11820818","ISBN:978-3-642-58301-8","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm capacitation","synonyms":[{"name":"sperm activation","type":"related"}],"termid":"GO:0048240"}


id: GO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior associated with attempts to flee from a threat.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fear-induced aggressive behavior","synonyms":[{"name":"fear-induced aggression","type":"exact"}],"termid":"GO:0002122"}


id: MONDO:0020632
data:
  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88372],"is_not":false,"summary":null,"term":"MONDO:0020632"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete epileptic encephalopathy, infantile or early childhood (obsolete MONDO:0020627)","termid":"MONDO:0020627"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 93","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4693934","DOID:0112275","MEDGEN:1642888","GARD:16285","OMIM:618012"],"synonyms":[{"name":"DEE93","type":"exact"},{"name":"IECEE3","type":"exact"},{"name":"developmental and epileptic encephalopathy 93","type":"exact"},{"name":"epileptic encephalopathy, infantile or early childhood, 3","type":"exact"}],"termid":"MONDO:0020632","terms_by_termid":{"MONDO:0020632":null},"xrefs":{"Monarch":{"xref_id":"0020632"}}}


id: PBO:0043061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chordin like 2","termid":"PBO:0043061"}


id: PBO:0042280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCZ1 pseudogene 1","termid":"PBO:0042280"}


id: PBO:0050739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 1","termid":"PBO:0050739"}


id: PBO:0081680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 601, pseudogene","termid":"PBO:0081680"}


id: PBO:0050316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 18","termid":"PBO:0050316"}


id: GO:2000393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lamellipodium morphogenesis.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of lamellipodium organization","termid":"GO:1902744"},{"relation_name":"is_a","term_name":"regulation of lamellipodium morphogenesis","termid":"GO:2000392"},{"relation_name":"negatively_regulates","term_name":"lamellipodium morphogenesis","termid":"GO:0072673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lamellipodium morphogenesis","synonyms":[{"name":"negative regulation of lamellipodium organization","type":"related"}],"termid":"GO:2000393"}


id: PBO:0067909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 211","termid":"PBO:0067909"}


id: PBO:0084311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Isomaltase (alpha-1,6-glucosidase/alpha-methylglucosidase); preferred specificity for isomaltose, alpha-methylglucoside, and palatinose, but also exhibits alpha-1,2 glucosidase activity on sucrose and kojibiose, and can cleave the 1,3-alpha linkage of nigerose and turanose and the alpha-1,5 linkage of leucrose in vitro; not required for isomaltose utilization, but Ima2p overexpression allows the ima1 null mutant to grow on isomaltose","termid":"PBO:0084311"}


id: GO:2000109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"regulates","term_name":"macrophage apoptotic process","termid":"GO:0071888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage apoptotic process","synonyms":[{"name":"regulation of AICD","type":"related"},{"name":"regulation of activation-induced cell death","type":"related"},{"name":"regulation of macrophage apoptosis","type":"narrow"}],"termid":"GO:2000109"}


id: PBO:0071673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 5","termid":"PBO:0071673"}


id: PBO:0059654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 20","termid":"PBO:0059654"}


id: PBO:0056322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K5 antisense RNA 2","termid":"PBO:0056322"}


id: PBO:0073079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal cell derived factor 4","termid":"PBO:0073079"}


id: PBO:0034436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_mitotic_cell_cycle_arrest_in_interphase_during_cellular_response_to_UV","termid":"PBO:0034436"}


id: MONDO:1012168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lower motor neuron disease, non-human animal","termid":"MONDO:1011848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower motor neuron disease, horse","secondary_identifiers":["OMIA:000662-9796"],"termid":"MONDO:1012168","xrefs":{"Monarch":{"xref_id":"1012168"}}}


id: MONDO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the kidney. It predominantly affects middle-aged females. It may originate from renal parenchymal fat or fat cells within the renal capsule. Clinical presentation includes hematuria and pain.","definition_xrefs":["NCIT:C5101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney lipoma","secondary_identifiers":["MEDGEN:277588","UMLS:C1335744","DOID:10194"],"synonyms":[{"name":"kidney lipoma","type":"exact"},{"name":"lipoma of kidney","type":"exact"},{"name":"lipoma of the kidney","type":"exact"},{"name":"renal lipoma","type":"exact"}],"termid":"MONDO:0000968","xrefs":{"Monarch":{"xref_id":"0000968"}}}


id: GO:1900568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of chanoclavine-I aldehyde.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete chanoclavine-I aldehyde catabolic process (obsolete GO:1900568)","synonyms":[{"name":"chanoclavine-I aldehyde breakdown","type":"exact"},{"name":"chanoclavine-I aldehyde catabolism","type":"exact"},{"name":"chanoclavine-I aldehyde degradation","type":"exact"}],"termid":"GO:1900568"}


id: GO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the mitochondrial inner membrane when the entire ATP synthase is assembled.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) (obsolete GO:0000275)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, catalytic core F(1)","type":"broad"}],"termid":"GO:0000275"}


id: PBO:0083610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame, unlikely to encode a protein; overlaps almost completely with YDL119C; mutations that would affect both YDL118W and YDL119C confer defective telomere maintenance and are synthetically sick or lethal with alpha-synuclein","termid":"PBO:0083610"}


id: PBO:0083486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene VPH2","termid":"PBO:0083486"}


id: PBO:0004627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm7","termid":"PBO:0004627"}


id: GO:0043935
data:
  {"annotated_genes":["SJAG_04238","SJAG_04868","SJAG_04236","SJAG_02712","SJAG_05309","SJAG_04271","SJAG_04901","SJAG_00974","SJAG_02718","SJAG_03746","SJAG_04781","SJAG_01531","SJAG_04184","SJAG_03536","SJAG_00826","SJAG_04922","SJAG_04010","SJAG_04853","SJAG_02169","SJAG_01662","SJAG_04140","SJAG_03057","SJAG_01769","SJAG_02320","SJAG_00405","SJAG_01483","SJAG_03483","SJAG_04615","SJAG_02529","SJAG_03250","SJAG_02248","SJAG_04483","SJAG_00114","SJAG_04470","SJAG_00993","SJAG_02241","SJAG_03688","SJAG_00971","SJAG_04080","SJAG_03557","SJAG_01017","SJAG_03587","SJAG_00663","SJAG_04859","SJAG_00486","SJAG_04275","SJAG_00821","SJAG_03915","SJAG_03090","SJAG_03013","SJAG_01321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98412,114700,107063,98829,113492,102636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[95882,113297],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[96332],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[90044,92091,93629,90539],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74774],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[106095,111038,119793,116078,119801],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[93355,74776,106915],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[121049,97254,93144,99484,101807,103626,107228,99447,112087,120565,109338,100724,115925,120866],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[101736,108781,106053,94151,101737,109670,104840,115926,98763,99448],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[113180],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[104207],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[92574],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[94047],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[101738,102026,117973,107959,101739,96380],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The formation of spores derived from the products of meiosis. A cellular spore is a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and desiccation resistance, and/or for reproduction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"},{"relation_name":"is_a","term_name":"sexual sporulation","termid":"GO:0034293"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"sexual sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043935","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PR:Q9URZ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- put4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URZ3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline-specific permease put4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.10c","synonyms":[{"name":"Spom972h-put4","type":"exact"}],"termid":"PR:Q9URZ3"}


id: GO:0140562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyses the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-L-serine = UDP + [protein with EGF-like domain]-3-O-(beta-D-xylosyl)-L-serine.","definition_xrefs":["RHEA:62016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"EGF-domain serine xylosyltransferase activity","secondary_identifiers":["EC:2.4.2.63"],"termid":"GO:0140562"}


id: PBO:0026655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_negative_regulation_of_transcription_by_glucose","termid":"PBO:0026655"}


id: MONDO:0009593
data:
  {"annotated_genes":["SJAG_01216"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86989],"is_not":false,"summary":null,"term":"MONDO:0009593"}]},"cv_name":"mondo","definition":"Spondylometaphyseal dysplasia (SEMD), Sedaghatian type is a neonatal lethal form of spondylometaphyseal dysplasia characterized by severe metaphyseal chondrodysplasia, mild rhizomelic shortness of the upper limbs, and mild platyspondyly.","definition_xrefs":["Orphanet:93317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"},{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"},{"relation_name":"is_a","term_name":"severe spondylodysplastic dysplasia","termid":"MONDO:0800080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01216":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019241"}],"interesting_parent_ids":["MONDO:0019241","MONDO:0005066"],"is_obsolete":false,"name":"spondylometaphyseal dysplasia, Sedaghatian type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:250220","UMLS:C1855229","DOID:0112298","icd11.foundation:975738106","GARD:4993","MESH:C535798","MEDGEN:340816"],"synonyms":[{"name":"SMDS","type":"related"},{"name":"Sedaghatian chondrodysplasia","type":"related"},{"name":"lethal metaphyseal dysplasia","type":"related"},{"name":"metaphyseal chondrodysplasia, congenital lethal","type":"related"},{"name":"spondylometaphyseal dysplasia Sedaghatian type","type":"related"},{"name":"spondylometaphyseal dysplasia, Sedaghatian type","type":"exact"}],"termid":"MONDO:0009593","terms_by_termid":{"MONDO:0009593":null},"xrefs":{"Monarch":{"xref_id":"0009593"}}}


id: PR:Q8J1M8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1952.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8J1M8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0768 protein C1952.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.04c","synonyms":[{"name":"Spom972h-SPAC1952.04c","type":"exact"}],"termid":"PR:Q8J1M8"}


id: GO:0071701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the directed movement of a MAP kinase from the nucleus to the cytoplasm.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of MAPK export from nucleus (obsolete GO:0071701)","synonyms":[{"name":"regulation of MAPK export from cell nucleus","type":"exact"},{"name":"regulation of MAPK export out of nucleus","type":"exact"},{"name":"regulation of MAPK transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of MAPK-nucleus export","type":"exact"},{"name":"regulation of cytoplasmic translocation of MAP kinase","type":"exact"},{"name":"regulation of cytoplasmic translocation of mitogen-activated protein kinase","type":"exact"}],"termid":"GO:0071701"}


id: MONDO:0002796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant embryonal neoplasm characterized by the presence of small cells which resemble the cells of classic medulloblastoma and a minor population of melanin-forming neuroepithelial cells. It usually has an unfavorable clinical course.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotic medulloblastoma","secondary_identifiers":["UMLS:C1275668","NCIT:C9497","DOID:3868","MEDGEN:224818","ONCOTREE:MMBL"],"synonyms":[{"name":"MMBL","type":"related"},{"name":"medulloblastoma with melanotic differentiation","type":"exact"},{"name":"medulloblastoma, melanotic","type":"exact"},{"name":"medulloblastoma, melanotic (morphologic abnormality)","type":"exact"},{"name":"melanocytic medulloblastoma","type":"exact"},{"name":"melanotic medulloblastoma","type":"exact"}],"termid":"MONDO:0002796","xrefs":{"Monarch":{"xref_id":"0002796"}}}


id: GO:0042552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.","definition_xrefs":["GOC:mah","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination","secondary_identifiers":["Wikipedia:Myelin"],"synonyms":[{"name":"myelinogenesis","type":"related"}],"termid":"GO:0042552"}


id: GO:0005976
data:
  {"annotated_genes":["SJAG_00667","SJAG_04659","SJAG_02192","SJAG_03705","SJAG_01835","SJAG_03123","SJAG_04236","SJAG_00485","SJAG_00876","SJAG_03444","SJAG_02478","SJAG_00218","SJAG_00115","SJAG_06309","SJAG_03646","SJAG_02178","SJAG_01290","SJAG_01453","SJAG_03057","SJAG_02076","SJAG_01028","SJAG_05285","SJAG_01787","SJAG_04184","SJAG_04666","SJAG_01561","SJAG_00963","SJAG_04483","SJAG_02131","SJAG_01783","SJAG_01963","SJAG_04771","SJAG_02222","SJAG_01288","SJAG_01426","SJAG_00620","SJAG_04668","SJAG_04327","SJAG_04073","SJAG_00424","SJAG_02916","SJAG_02278","SJAG_04509","SJAG_01888","SJAG_01255","SJAG_03851","SJAG_00183","SJAG_03295","SJAG_03824","SJAG_01017","SJAG_00610","SJAG_02649","SJAG_01376","SJAG_04878","SJAG_01171","SJAG_04963","SJAG_03587","SJAG_05001","SJAG_02446","SJAG_01089","SJAG_04462","SJAG_02590","SJAG_04864"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115992],"is_not":false,"summary":null,"term":"GO:0005976"},{"annotations":[76963,78594,64270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[97133,95195,81271,102530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051072"},{"annotations":[96332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[121275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030995"},{"annotations":[102055,95884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"},{"annotations":[75302,73179,80579,72390,75130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[115153,117822,108050,77649,93454,74777,76296,72820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[80019,104560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[110026,103860,96983,103859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[74297,108642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071966"},{"annotations":[76882,75040,78852,72348,72245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009251"},{"annotations":[105224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[81991,74329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005977"},{"annotations":[73596,75172,81678,74880,80659,73858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[78887,80829],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[59017,68443,110356,117630,97993,97994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000272"},{"annotations":[94281,89341],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[89724],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[69407,107284,92617,107859,119921,94265,120054],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[96819,104769,91282,94287],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"macromolecule metabolic 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id: GO:0030575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of any of the extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.","definition_xrefs":["GOC:mah","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear body organization","synonyms":[{"name":"nuclear body organisation","type":"exact"},{"name":"nuclear body organization and biogenesis","type":"related"}],"termid":"GO:0030575"}


id: GO:0006271
data:
  {"annotated_genes":["SJAG_02294","SJAG_00814","SJAG_02182","SJAG_00198","SJAG_05232","SJAG_04210","SJAG_02199","SJAG_02667","SJAG_03495","SJAG_00874","SJAG_04879","SJAG_01762","SJAG_04877","SJAG_01010","SJAG_00729","SJAG_05197","SJAG_00272","SJAG_00884","SJAG_03780","SJAG_01823","SJAG_02818","SJAG_02908","SJAG_00863","SJAG_02690","SJAG_00618","SJAG_04183","SJAG_05239","SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72726,75222,79182],"is_not":false,"summary":null,"term":"GO:0006271"},{"annotations":[111915,66914,69014,114504,115559,72118,117407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[76641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006273"},{"annotations":[76640,72135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006272"},{"annotations":[106152,106874,111075,97120,104749,120206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[109303,97121,95828,106153,108932,106875,97153,91419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"},{"annotations":[96937,94515,73933,102522,103420,106078,102556],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication.","definition_xrefs":["GOC:mah","ISBN:071673706X","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation","termid":"GO:0022616"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00272":null,"SJAG_00618":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02667":null,"SJAG_02690":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"DNA strand elongation involved in DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-69190"],"synonyms":[{"name":"DNA replication elongation","type":"exact"},{"name":"DNA strand elongation during DNA replication","type":"related"}],"termid":"GO:0006271","terms_by_termid":{"GO:0006271":null,"GO:0006272":null,"GO:0006273":null,"GO:1902983":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null}}


id: MONDO:0015058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Waterhouse-Friderichsen syndrome (obsolete MONDO:0015058)","termid":"MONDO:0015058","xrefs":{"Monarch":{"xref_id":"0015058"}}}


id: PBO:0046878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A3, pseudogene","termid":"PBO:0046878"}


id: GO:1905592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of optical nerve axon regeneration.","definition_xrefs":["PMID:16699509","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon regeneration","termid":"GO:0048681"},{"relation_name":"is_a","term_name":"regulation of optical nerve axon regeneration","termid":"GO:1905591"},{"relation_name":"negatively_regulates","term_name":"optical nerve axon regeneration","termid":"GO:0101027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of optical nerve axon regeneration","synonyms":[{"name":"down regulation of optical nerve axon regeneration","type":"exact"},{"name":"down-regulation of optical nerve axon regeneration","type":"exact"},{"name":"downregulation of optical nerve axon regeneration","type":"exact"},{"name":"inhibition of optical nerve axon regeneration","type":"narrow"}],"termid":"GO:1905592"}


