# terms

id: PBO:0069829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1115, pseudogene","termid":"PBO:0069829"}


id: PR:O42898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A catechol O-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02560","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol O-methyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.03","secondary_identifiers":["UniProtKB:O42898"],"synonyms":[{"name":"Spom972h-COMT","type":"exact"}],"termid":"PR:O42898"}


id: PBO:0046048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3E pseudogene 1","termid":"PBO:0046048"}


id: PR:Q09822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc15 gene.","definition_xrefs":["UniProtKB:Q09822","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.05c","synonyms":[{"name":"Spom972h-cdc15","type":"exact"}],"termid":"PR:Q09822"}


id: GO:0010903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle remodeling","termid":"GO:0010901"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"negative regulation of VLDL remodeling","type":"exact"},{"name":"negative regulation of VLDL remodelling","type":"exact"},{"name":"negative regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010903"}


id: GO:0008234
data:
  {"annotated_genes":["SJAG_00742","SJAG_02774","SJAG_00776","SJAG_00795","SJAG_00644","SJAG_03686","SJAG_03429","SJAG_03752","SJAG_04651","SJAG_04215","SJAG_02244","SJAG_02419","SJAG_01481","SJAG_01528","SJAG_03292","SJAG_02542","SJAG_00573","SJAG_00546","SJAG_03672","SJAG_00764","SJAG_01312","SJAG_01283","SJAG_16454","SJAG_01768","SJAG_04497","SJAG_05977","SJAG_02341","SJAG_00966","SJAG_00135","SJAG_04538","SJAG_02214","SJAG_00087"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58634,69323],"is_not":false,"summary":null,"term":"GO:0008234"},{"annotations":[76432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016807"},{"annotations":[70912,79853,116308,73702,74625,76958,75478,71791,78213,78156,78280,75484,75907,78710,82074,95270,99910,67180,79330,65122,63502,68551,74333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004843"},{"annotations":[78806,72506,75938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004197"},{"annotations":[92112,71733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016929"},{"annotations":[89260,77134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003923"},{"annotations":[76651,108081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00135":null,"SJAG_00546":null,"SJAG_00573":null,"SJAG_00644":null,"SJAG_00742":null,"SJAG_00764":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_00966":null,"SJAG_01283":null,"SJAG_01312":null,"SJAG_01481":null,"SJAG_01528":null,"SJAG_01768":null,"SJAG_02214":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02542":null,"SJAG_02774":null,"SJAG_03292":null,"SJAG_03429":null,"SJAG_03672":null,"SJAG_03686":null,"SJAG_03752":null,"SJAG_04215":null,"SJAG_04497":null,"SJAG_04538":null,"SJAG_04651":null,"SJAG_05977":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"cysteine-type peptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5660752","Reactome:R-HSA-2467775","GO:0004220","Reactome:R-HSA-2467809","Reactome:R-HSA-9757951","Reactome:R-HSA-2022381"],"synonyms":[{"name":"cysteine protease activity","type":"narrow"},{"name":"thiol protease activity","type":"narrow"}],"termid":"GO:0008234","terms_by_termid":{"GO:0003923":null,"GO:0004197":null,"GO:0004843":null,"GO:0008234":null,"GO:0016807":null,"GO:0016929":null,"GO:0070139":null}}


id: PBO:0066849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 149","termid":"PBO:0066849"}


id: GO:1902949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of tau-protein kinase activity.","definition_xrefs":["PMID:22986780","GOC:sjp","PMID:15897157","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of tau-protein kinase activity (obsolete GO:1902949)","secondary_identifiers":["Reactome:R-HSA-9032845"],"synonyms":[{"name":"activation of CDK5/p23","type":"related"},{"name":"activation of GSK","type":"related"},{"name":"activation of STK31","type":"related"},{"name":"activation of TPK","type":"related"},{"name":"activation of TPK I","type":"related"},{"name":"activation of TPK II","type":"related"},{"name":"activation of TTK","type":"related"},{"name":"activation of [Tau protein] kinase activity","type":"narrow"},{"name":"activation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"activation of cdk5/p20","type":"related"},{"name":"activation of glycogen synthase kinase-3beta activity","type":"narrow"},{"name":"activation of protein tau kinase activity","type":"narrow"},{"name":"activation of tau kinase activity","type":"narrow"},{"name":"activation of tau protein kinase activity","type":"narrow"},{"name":"activation of tau-protein kinase I activity","type":"narrow"},{"name":"activation of tau-protein kinase II activity","type":"narrow"},{"name":"activation of tau-protein kinase activity","type":"narrow"},{"name":"activation of tau-tubulin kinase activity","type":"narrow"},{"name":"positive regulation of CDK5/p23","type":"related"},{"name":"positive regulation of GSK","type":"related"},{"name":"positive regulation of STK31","type":"related"},{"name":"positive regulation of TPK","type":"related"},{"name":"positive regulation of TPK I","type":"related"},{"name":"positive regulation of TPK II","type":"related"},{"name":"positive regulation of TTK","type":"related"},{"name":"positive regulation of [Tau protein] kinase activity","type":"exact"},{"name":"positive regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"positive regulation of cdk5/p20","type":"related"},{"name":"positive regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"positive regulation of protein tau kinase activity","type":"exact"},{"name":"positive regulation of tau kinase activity","type":"exact"},{"name":"positive regulation of tau protein kinase activity","type":"exact"},{"name":"positive regulation of tau-protein kinase I activity","type":"narrow"},{"name":"positive regulation of tau-protein kinase II activity","type":"narrow"},{"name":"positive regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"up regulation of CDK5/p23","type":"related"},{"name":"up regulation of GSK","type":"related"},{"name":"up regulation of STK31","type":"related"},{"name":"up regulation of TPK","type":"related"},{"name":"up regulation of TPK I","type":"related"},{"name":"up regulation of TPK II","type":"related"},{"name":"up regulation of TTK","type":"related"},{"name":"up regulation of [Tau protein] kinase activity","type":"exact"},{"name":"up regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"up regulation of cdk5/p20","type":"related"},{"name":"up regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"up regulation of protein tau kinase activity","type":"exact"},{"name":"up regulation of tau kinase activity","type":"exact"},{"name":"up regulation of tau protein kinase activity","type":"exact"},{"name":"up regulation of tau-protein kinase I activity","type":"narrow"},{"name":"up regulation of tau-protein kinase II activity","type":"narrow"},{"name":"up regulation of tau-protein kinase activity","type":"exact"},{"name":"up regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"up-regulation of CDK5/p23","type":"related"},{"name":"up-regulation of GSK","type":"related"},{"name":"up-regulation of STK31","type":"related"},{"name":"up-regulation of TPK","type":"related"},{"name":"up-regulation of TPK I","type":"related"},{"name":"up-regulation of TPK II","type":"related"},{"name":"up-regulation of TTK","type":"related"},{"name":"up-regulation of [Tau protein] kinase activity","type":"exact"},{"name":"up-regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"up-regulation of cdk5/p20","type":"related"},{"name":"up-regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"up-regulation of protein tau kinase activity","type":"exact"},{"name":"up-regulation of tau kinase activity","type":"exact"},{"name":"up-regulation of tau protein kinase activity","type":"exact"},{"name":"up-regulation of tau-protein kinase I activity","type":"narrow"},{"name":"up-regulation of tau-protein kinase II activity","type":"narrow"},{"name":"up-regulation of tau-protein kinase activity","type":"exact"},{"name":"up-regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"upregulation of CDK5/p23","type":"related"},{"name":"upregulation of GSK","type":"related"},{"name":"upregulation of STK31","type":"related"},{"name":"upregulation of TPK","type":"related"},{"name":"upregulation of TPK I","type":"related"},{"name":"upregulation of TPK II","type":"related"},{"name":"upregulation of TTK","type":"related"},{"name":"upregulation of [Tau protein] kinase activity","type":"exact"},{"name":"upregulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"upregulation of cdk5/p20","type":"related"},{"name":"upregulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"upregulation of protein tau kinase activity","type":"exact"},{"name":"upregulation of tau kinase activity","type":"exact"},{"name":"upregulation of tau protein kinase activity","type":"exact"},{"name":"upregulation of tau-protein kinase I activity","type":"narrow"},{"name":"upregulation of tau-protein kinase II activity","type":"narrow"},{"name":"upregulation of tau-protein kinase activity","type":"exact"},{"name":"upregulation of tau-tubulin kinase activity","type":"narrow"}],"termid":"GO:1902949"}


id: PBO:0070948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 3","termid":"PBO:0070948"}


id: PBO:0004680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF953 family protein","termid":"PBO:0004680"}


id: PBO:0053293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIMK2 pseudogene 1","termid":"PBO:0053293"}


id: PBO:0054787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2200","termid":"PBO:0054787"}


id: MONDO:0015020
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88688],"is_not":false,"summary":null,"term":"MONDO:0015020"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the IMPA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 59","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617323","UMLS:C4310619","MEDGEN:934586","DOID:0081221"],"synonyms":[{"name":"IMPA1 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT59","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in IMPA1","type":"exact"},{"name":"intellectual disability, autosomal recessive 59","type":"exact"},{"name":"intellectual disability, autosomal recessive type 59","type":"exact"},{"name":"mental retardation, autosomal recessive 59","type":"exact"},{"name":"mental retardation, autosomal recessive type 59","type":"exact"}],"termid":"MONDO:0015020","terms_by_termid":{"MONDO:0015020":null},"xrefs":{"Monarch":{"xref_id":"0015020"}}}


id: PBO:0044722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 9 (pseudogene)","termid":"PBO:0044722"}


id: PBO:0004135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp14","termid":"PBO:0004135"}


id: PBO:0073534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like, endophilin B2","termid":"PBO:0073534"}


id: PBO:0089495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L24","termid":"PBO:0089495"}


id: PBO:0030673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030673"}


id: GO:0090619
data:
  {"annotated_genes":["SJAG_01613","SJAG_01464","SJAG_04745","SJAG_02241","SJAG_03915","SJAG_02320","SJAG_02368","SJAG_01805","SJAG_05196","SJAG_01546"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93139,95651,95724,96642,98654,101106,101804,104730,109043,120864],"is_not":false,"summary":null,"term":"GO:0090619"}]},"cv_name":"cellular_component","definition":"Either of the ends of a meiotic spindle, a spindle that forms as part of meiosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["GOC:ha","PMID:18250200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole","termid":"GO:0000922"},{"relation_name":"part_of","term_name":"meiotic spindle","termid":"GO:0072687"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_03915":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"meiotic spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090619","terms_by_termid":{"GO:0090619":null}}


id: PBO:0071647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 11","termid":"PBO:0071647"}


id: PBO:0003573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Sol1","termid":"PBO:0003573"}


id: PBO:0041833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 9","termid":"PBO:0041833"}


id: PBO:0039145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 2 pseudogene 2","termid":"PBO:0039145"}


id: PBO:0047169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 2","termid":"PBO:0047169"}


id: PBO:0049084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 139","termid":"PBO:0049084"}


id: MONDO:1012572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer that occurs in pigs.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, pig","secondary_identifiers":["OMIA:002587-9823"],"termid":"MONDO:1012572","xrefs":{"Monarch":{"xref_id":"1012572"}}}


id: GO:0106433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction O6-methyl-dGTP + H2O = O6-methyl-dGMP + diphosphate + H+.","definition_xrefs":["PMID:30304478","RHEA:67600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"O6-methyl-dGTP hydrolase activity","termid":"GO:0106433"}


id: PBO:0034205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_model_of","termid":"PBO:0034205"}


id: MONDO:0014286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary sensory and autonomic neuropathy type 1 in which the cause of the disease is a mutation in the ATL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy type 1","termid":"MONDO:0018213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary sensory, type 1F","secondary_identifiers":["DOID:0070154","MEDGEN:816524","GARD:15995","OMIM:615632","UMLS:C3810194"],"synonyms":[{"name":"ATL3 hereditary sensory and autonomic neuropathy type 1","type":"exact"},{"name":"HSN 1F","type":"related"},{"name":"HSN1F","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 1 caused by mutation in ATL3","type":"exact"},{"name":"hereditary sensory neuropathy type 1F","type":"related"},{"name":"hereditary sensory neuropathy type IF","type":"exact"},{"name":"neuropathy, hereditary sensory, type 1F","type":"exact"},{"name":"neuropathy, hereditary sensory, type IF","type":"related"}],"termid":"MONDO:0014286","xrefs":{"Monarch":{"xref_id":"0014286"}}}


id: MONDO:0040677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that is not confined to the epithelium, and has spread to the surrounding stroma.","definition_xrefs":["NCIT:C9480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"invasive carcinoma","secondary_identifiers":["UMLS:C1334274","MEDGEN:233579"],"synonyms":[{"name":"invasive carcinoma","type":"exact"}],"termid":"MONDO:0040677","xrefs":{"Monarch":{"xref_id":"0040677"}}}


id: MONDO:0008175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pacman dysplasia is characterized by epiphyseal stippling and osteoclastic overactivity. It has been described in less than 10 patients but may be underdiagnosed. It is characterized radiographically by severe stippling of the lower spine and long bones, and periosteal cloaking. Patients also have short metacarpals. The syndrome may be inherited as an autosomal recessive trait. This disorder should be included in the differential diagnosis of mucolipidosis type II. In order to make a definitive diagnosis, lysosomal storage should be investigated by electron microscopy, or enzyme assays should be performed. Familial recurrence can be easily detected by prenatal ultrasonography. This skeletal dysplasia is lethal.","definition_xrefs":["Orphanet:1952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pacman dysplasia","secondary_identifiers":["icd11.foundation:519938437","MESH:C538095","SCTID:722127006","UMLS:C1833676","MEDGEN:331566","GARD:4189","OMIM:167220"],"synonyms":[{"name":"Pacman syndrome","type":"related"},{"name":"epiphyseal stippling syndrome-osteoclastic hyperplasia syndrome","type":"exact"},{"name":"epiphyseal stippling with osteoclastic hyperplasia","type":"related"},{"name":"pacman dysplasia","type":"exact"}],"termid":"MONDO:0008175","xrefs":{"Monarch":{"xref_id":"0008175"}}}


id: PBO:0061216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 8","termid":"PBO:0061216"}


id: GO:0141174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts anti-inflammatory cytokine signaling in the host organism, either by disruption of production, sequesteration, or destruction of at least one component of the signaling pathway.  Anti-inflammatory cytokines include: interleukin (IL)-1, IL-4, IL-6, IL-10, IL-11, and IL-13. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:29720526","PMID:32754056","PMID:19168731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","termid":"GO:0075109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host anti-inflammatory cytokine signaling","synonyms":[{"name":"negative regulation by symbiont of host anti-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host anti-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host anti-inflammatory cytokine secretion","type":"related"},{"name":"symbiont-mediated degradation of host anti-inflammatory cytokine","type":"narrow"},{"name":"symbiont-mediated sequestering of host anti-inflammatory cytokine","type":"related"},{"name":"symbiont-mediated suppression of host anti-inflammatory cytokine production","type":"related"}],"termid":"GO:0141174"}


id: PBO:0084769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial NAD+ transporter; involved in the transport of NAD+ into the mitochondria (see also YEA6); member of the mitochondrial carrier subfamily; disputed role as a pyruvate transporter; has putative mouse and human orthologs; YIA6 has a paralog, YEA6, that arose from the whole genome duplication; human NAD+ transporter MCART1/SLC25A51 functionally complements the yia6 yea6 double null mutant, and yeast YIA6 reciprocally complements defects in MCART1/SLC25A51 null cells","termid":"PBO:0084769"}


id: PBO:0034099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_branching_relationship_with","termid":"PBO:0034099"}


id: FYPO:0007914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation occurs during mitotic metaphase.","definition_xrefs":["PMID:10398680","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic sister chromatid separation","termid":"FYPO:0000416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000337"],"is_obsolete":false,"name":"mitotic sister chromatid separation during metaphase","termid":"FYPO:0007914"}


id: PBO:0055956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 70","termid":"PBO:0055956"}


id: GO:0072588
data:
  {"annotated_genes":["SJAG_00566","SJAG_01234","SJAG_04754","SJAG_00083"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76283,79410,82108,59457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031429"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains an RNA of the box H/ACA type and the four core proteins dyskerin, NOP10, NHP2, and GAR1 (human protein nomenclature). RNA pseudouridylation (isomerization of uridine to pseudouridine) is the major, and most likely the ancestral, function of H/ACA RNPs. Pseudouridylation targets include both large and small ribosomal RNAs (rRNAs), and small nuclear RNA (U2 snRNA). In addition to these catalytic H/ACA RNPs, a less abundant but more diverse class of structural H/ACA RNPs exists, which does not have pseudouridylation activity. These include the vertebrate telomerase RNP complex.","definition_xrefs":["GOC:krc","GOC:BHF","GOC:BHF_telomerase","PMID:25590339","PMID:17284456","PMID:20227365","GOC:jbu","GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA-containing ribonucleoprotein complex","termid":"GO:0005732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"box H/ACA RNP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null},"synonyms":[{"name":"box H/ACA snoRNP pseudouridylase complex","type":"related"},{"name":"sRNP complex","type":"narrow"}],"termid":"GO:0072588","terms_by_termid":{"GO:0031429":null}}


id: PBO:0059246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L15 pseudogene 1","termid":"PBO:0059246"}


id: GO:0042984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"amyloid precursor protein biosynthetic process","termid":"GO:0042983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid precursor protein biosynthetic process","synonyms":[{"name":"regulation of APP biosynthesis","type":"exact"},{"name":"regulation of APP biosynthetic process","type":"exact"},{"name":"regulation of amyloid precursor protein anabolism","type":"exact"},{"name":"regulation of amyloid precursor protein biosynthesis","type":"exact"},{"name":"regulation of amyloid precursor protein formation","type":"exact"},{"name":"regulation of amyloid precursor protein synthesis","type":"exact"}],"termid":"GO:0042984"}


id: MONDO:0020473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chondrodysplasia punctata","termid":"MONDO:0019701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dappled diaphyseal dysplasia","secondary_identifiers":["MEDGEN:468529","SCTID:389262009","icd11.foundation:2067032637","ICD9:756.59","Orphanet:99645","UMLS:C1300227"],"termid":"MONDO:0020473","xrefs":{"Monarch":{"xref_id":"0020473"}}}


id: PBO:0064717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 53","termid":"PBO:0064717"}


id: PBO:0044764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 47","termid":"PBO:0044764"}


id: PBO:0050147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 3","termid":"PBO:0050147"}


id: PBO:0028847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_splicing","termid":"PBO:0028847"}


id: PBO:0051582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor E like","termid":"PBO:0051582"}


id: GO:0048601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of an oocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of an oocyte.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte morphogenesis","synonyms":[{"name":"oocyte morphogenesis during differentiation","type":"exact"}],"termid":"GO:0048601"}


id: GO:0070815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + 2-oxoglutarate + O2 = (5S)-5-hydroxy-L-lysyl-[protein] + succinate + CO2.","definition_xrefs":["RHEA:58360","PMID:19574390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"peptidyl-lysine 5-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-9630022"],"synonyms":[{"name":"lysine hydroxylase activity","type":"broad"},{"name":"lysine,2-oxoglutarate 5-dioxygenase activity","type":"broad"},{"name":"lysine-2-oxoglutarate dioxygenase activity","type":"broad"},{"name":"lysyl hydroxylase activity","type":"broad"},{"name":"peptide-lysine 5-dioxygenase activity","type":"exact"},{"name":"peptidyl-lysine, 2-oxoglutarate: oxygen oxidoreductase activity","type":"related"},{"name":"peptidyllysine, 2-oxoglutarate:oxygen 5-oxidoreductase activity","type":"related"},{"name":"protein lysine hydroxylase activity","type":"exact"}],"termid":"GO:0070815"}


id: PBO:0074591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 5C","termid":"PBO:0074591"}


id: GO:0030595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte in response to an external stimulus.","definition_xrefs":["GOC:add","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte chemotaxis","synonyms":[{"name":"immune cell chemotaxis","type":"exact"},{"name":"leucocyte chemotaxis","type":"exact"}],"termid":"GO:0030595"}


id: MONDO:0005334
data:
  {"annotated_genes":["SJAG_03994"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013898"}]},"cv_name":"mondo","definition":"A group of inherited conditions characterized initially by hematuria and slowly progressing to renal insufficiency. The most common form is the Alport syndrome (hereditary nephritis with hearing loss) which is caused by mutations in genes for type IV collagen and defective glomerular basement membrane.","definition_xrefs":["EFO:0004128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephritis","termid":"MONDO:0001166"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hereditary nephritis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:399340005","MEDGEN:10305","MESH:D009394","UMLS:C0027706"],"synonyms":[{"name":"familial nephritis","type":"related"},{"name":"hereditary nephritis","type":"exact"},{"name":"nephritis, familial","type":"related"}],"termid":"MONDO:0005334","terms_by_termid":{"MONDO:0013898":null},"xrefs":{"Monarch":{"xref_id":"0005334"}}}


id: GO:0031688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A2B adenosine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"A2B adenosine receptor binding","synonyms":[{"name":"A2B adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031688"}


id: PBO:0059523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6","termid":"PBO:0059523"}


id: MONDO:0017819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dentin dysplasia type I","termid":"MONDO:0007436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical dentin dysplasia due to SMOC2 deficiency","secondary_identifiers":["GARD:17433","Orphanet:314721","MEDGEN:1673452","UMLS:C5190802"],"synonyms":[{"name":"dentin dysplasia type 1 with microdontia and shape anomalies","type":"exact"}],"termid":"MONDO:0017819","xrefs":{"Monarch":{"xref_id":"0017819"}}}


id: MONDO:0017649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemidystonia-hemiatrophy (HD-HA) is a rare dystonia, usually caused by a static cerebral injury occurring at birth or during infancy, that is characterized by a combination of hemidystonia (HD), involving one half of the body, and hemiatrophy (HA) on the same side as the HD.","definition_xrefs":["Orphanet:306741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dystonic disorder","termid":"MONDO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"hemidystonia-hemiatrophy syndrome","secondary_identifiers":["MEDGEN:1386711","UMLS:C4510649","GARD:21273"],"synonyms":[{"name":"HD-HA syndrome","type":"exact"}],"termid":"MONDO:0017649","xrefs":{"Monarch":{"xref_id":"0017649"}}}


id: SO:0001343
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_7_2prirme_O_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_7_2prirme_O_trimethylguanosine","secondary_identifiers":["RNAMOD:106"],"synonyms":[{"name":"N2 7 2prirme O trimethylguanosine","type":"exact"},{"name":"N2,7,2'-O-trimethylguanosine","type":"exact"},{"name":"m2,7Gm","type":"exact"}],"termid":"SO:0001343"}


id: PBO:0085756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in cell proliferation in response to nutrients; glucose-repressible; involved in signal transduction during cell proliferation in response to nutrients, specifically the establishment of stationary phase; identified as a regulator of IME2; phosphorylates Igo1p and Igo2p; substrate of Pho80p-Pho85p kinase","termid":"PBO:0085756"}


id: MONDO:0859202
data:
  {"annotated_genes":["SJAG_02571"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88092],"is_not":false,"summary":null,"term":"MONDO:0859202"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02571":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay, hypotonia, musculoskeletal defects, and behavioral abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794222","OMIM:619595","UMLS:C5562012"],"termid":"MONDO:0859202","terms_by_termid":{"MONDO:0859202":null},"xrefs":{"Monarch":{"xref_id":"0859202"}}}


id: MONDO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant histiocytic disease (obsolete MONDO:0002346)","termid":"MONDO:0002346","xrefs":{"Monarch":{"xref_id":"0002346"}}}


id: MONDO:0019115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanocortin 4 receptor (MC4R) deficiency is the commonest form of monogenic obesity identified so far. MC4R deficiency is characterized by severe obesity, an increase in lean body mass and bone mineral density, increased linear growth in early childhood, hyperphagia beginning in the first year of life and severe hyperinsulinaemia, in the presence of preserved reproductive function.","definition_xrefs":["Orphanet:71529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited obesity","termid":"MONDO:0019182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity due to melanocortin 4 receptor deficiency","secondary_identifiers":["SCTID:717269008","UMLS:C4273958","GARD:16690","NCIT:C120394","MEDGEN:903905"],"synonyms":[{"name":"MC4R deficiency","type":"exact"}],"termid":"MONDO:0019115","xrefs":{"Monarch":{"xref_id":"0019115"}}}


id: GO:0004161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = (2E)-geranyl diphosphate + diphosphate.","definition_xrefs":["RHEA:22408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"dimethylallyltranstransferase activity","secondary_identifiers":["Reactome:R-HSA-9717834","Reactome:R-HSA-191322","EC:2.5.1.1","MetaCyc:GPPSYN-RXN"],"synonyms":[{"name":"(2E,6E)-farnesyl diphosphate synthetase activity","type":"related"},{"name":"DMAPP:IPP-dimethylallyltransferase activity","type":"related"},{"name":"dimethylallyl-diphosphate:isopentenyl-diphosphate dimethylallyltranstransferase activity","type":"related"},{"name":"dimethylallyltransferase activity","type":"exact"},{"name":"diprenyltransferase activity","type":"related"},{"name":"geranyl diphosphate synthase activity","type":"exact"},{"name":"geranyl pyrophosphate synthase activity","type":"related"},{"name":"geranyl pyrophosphate synthetase activity","type":"related"},{"name":"geranyl-diphosphate synthase activity","type":"related"},{"name":"trans-farnesyl pyrophosphate synthetase activity","type":"related"}],"termid":"GO:0004161"}


id: PBO:0004422
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates eng1 target genes","termid":"PBO:0004422"}


id: PBO:0061792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 3","termid":"PBO:0061792"}


id: MONDO:0003473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma that arises from the spinal cord.","definition_xrefs":["NCIT:C3875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"},{"relation_name":"is_a","term_name":"ependymal tumor of spinal cord","termid":"MONDO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spinal cord ependymoma","secondary_identifiers":["SCTID:254949006","MONDO:0021544","UMLS:C0238432","DOID:5503","MEDGEN:65968"],"synonyms":[{"name":"ependymal neoplasm of the spinal cord","type":"exact"},{"name":"ependymoma of spinal cord","type":"exact"},{"name":"ependymoma of the spinal cord","type":"exact"},{"name":"spinal cord ependymoma","type":"exact"}],"termid":"MONDO:0003473","xrefs":{"Monarch":{"xref_id":"0003473"}}}


id: MONDO:0014531
data:
  {"annotated_genes":["SJAG_04387","SJAG_02509"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87233,87234],"is_not":false,"summary":null,"term":"MONDO:0014531"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the TUBA4A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 22","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16068","OMIM:616208","DOID:0060355","MEDGEN:863949","UMLS:C4015512"],"synonyms":[{"name":"ALS 22","type":"exact"},{"name":"ALS22","type":"related"},{"name":"TUBA4A amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 22","type":"exact"},{"name":"amyotrophic lateral sclerosis 22 with or without frontotemporal dementia","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in TUBA4A","type":"exact"},{"name":"amyotrophic lateral sclerosis type 22","type":"exact"}],"termid":"MONDO:0014531","terms_by_termid":{"MONDO:0014531":null},"xrefs":{"Monarch":{"xref_id":"0014531"}}}


id: GO:0050619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3Z)-phytochromobilin + oxidized ferredoxin = biliverdin IXa + reduced ferredoxin.","definition_xrefs":["EC:1.3.7.4","MetaCyc:1.3.7.4-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phytochromobilin:ferredoxin oxidoreductase activity","secondary_identifiers":["RHEA:16377"],"synonyms":[{"name":"(3Z)-phytochromobilin:ferredoxin oxidoreductase activity","type":"related"},{"name":"HY2","type":"related"},{"name":"P-Phi-B synthase activity","type":"related"},{"name":"PFB synthase activity","type":"related"},{"name":"PPhiB synthase activity","type":"related"},{"name":"phytochromobilin synthase activity","type":"related"}],"termid":"GO:0050619"}


id: MONDO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare histological variant of glioblastoma (WHO grade IV) with a predominance of bizarre, multinucleated giant cells, an occasionally abundant stromal reticulin network, and a high frequency of TP53 mutations. (WHO)","definition_xrefs":["NCIT:C4325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain glioblastoma","termid":"MONDO:0002501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"giant cell glioblastoma","secondary_identifiers":["icd11.foundation:565094124","MEDGEN:83169","UMLS:C0334588","ICDO:9441/3","Orphanet:251579","DOID:3074","GARD:20705"],"synonyms":[{"name":"Monstrocellular sarcoma","type":"exact"},{"name":"Monstrocellular sarcoma [obs]","type":"exact"}],"termid":"MONDO:0016682","xrefs":{"Monarch":{"xref_id":"0016682"}}}


id: PBO:0018060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,4-dihydroxy-2-butanone 4-phosphate synthase Rib3 (predicted)","termid":"PBO:0018060"}


id: GO:0099117
data:
  {"annotated_genes":["SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105670],"is_not":false,"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"The movement of a protein along a microtubule to the cell-tip, mediated by motor proteins.","definition_xrefs":["PMID:15177031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"},{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein transport along microtubule to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099117","terms_by_termid":{"GO:0099117":null}}


id: MONDO:0014742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the CHCHD2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late-onset Parkinson disease","termid":"MONDO:0008199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 22, autosomal dominant","secondary_identifiers":["UMLS:C4225238","MEDGEN:907886","DOID:0080504","OMIM:616710"],"synonyms":[{"name":"CHCHD2 Parkinson disease","type":"exact"},{"name":"PARK22","type":"exact"},{"name":"Parkinson disease 22, autosomal dominant","type":"exact"},{"name":"Parkinson disease 22, autosomal dominant; PARK22","type":"exact"},{"name":"Parkinson disease caused by mutation in CHCHD2","type":"exact"}],"termid":"MONDO:0014742","xrefs":{"Monarch":{"xref_id":"0014742"}}}


id: PBO:0017723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate mutase Aro7 (predicted)","termid":"PBO:0017723"}


id: PBO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/DEAH box helicase","termid":"PBO:0000174"}


id: MONDO:0032798
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88797,88798],"is_not":false,"summary":null,"term":"MONDO:0032798"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"is_obsolete":false,"name":"ichthyotic keratoderma, spasticity, hypomyelination, and dysmorphic facial features","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1682428","OMIM:618527","UMLS:C5193147"],"synonyms":[{"name":"ICHTHYOTIC KERATODERMA, SPASTICITY, HYPOMYELINATION, AND DYSMORPHIC FACIAL FEATURES","type":"related"},{"name":"IKSHD","type":"related"},{"name":"ichthyotic keratoderma, spasticity, hypomyelination, and dysmorphic facies","type":"exact"}],"termid":"MONDO:0032798","terms_by_termid":{"MONDO:0032798":null},"xrefs":{"Monarch":{"xref_id":"0032798"}}}


id: MONDO:0016603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Citrullinemia type II is a severe subtype of citrin deficiency characterized clinically by adult onset (20 and 50 years of age), recurrent episodes of hyperammonemia and associated neuropsychiatric symptoms such as nocturnal delirium, confusion, restlessness, disorientation, drowsiness, memory loss, abnormal behavior (aggression, irritability, and hyperactivity), seizures, and coma.","definition_xrefs":["Orphanet:247585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrin deficiency","termid":"MONDO:0016602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"citrullinemia type II","secondary_identifiers":["SCTID:716863007","NANDO:1200980","NCIT:C150603","MEDGEN:350276","UMLS:C1863844","GARD:10215"],"synonyms":[{"name":"CTLN2","type":"exact"},{"name":"adult-onset citrin deficiency","type":"exact"},{"name":"adult-onset type 2 citrullinemia","type":"exact"},{"name":"adult-onset type II citrullinemia","type":"exact"},{"name":"citrullinemia type 2","type":"exact"},{"name":"citrullinemia type II","type":"exact"}],"termid":"MONDO:0016603","xrefs":{"Monarch":{"xref_id":"0016603"}}}


id: PBO:0080362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 17, pseudogene","termid":"PBO:0080362"}


id: PBO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase Pub2","termid":"PBO:0001735"}


id: GO:1905057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any voltage-gated calcium channel activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GO_REF:0000061","GOC:TermGenie","PMID:20734177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in regulation of cytosolic calcium levels","termid":"GO:0099511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in regulation of postsynaptic cytosolic calcium levels","synonyms":[{"name":"depolarization-activated voltage gated calcium channel activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"depolarization-activated voltage-gated calcium channel activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"depolarization-activated voltage-gated calcium channel involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"dihydropyridine-sensitive calcium channel activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"voltage gated calcium channel activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"voltage-dependent calcium channel activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"voltage-gated calcium channel activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"},{"name":"voltage-gated calcium ion channel activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"voltage-sensitive calcium channel involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"}],"termid":"GO:1905057"}


id: PBO:0038879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 6","termid":"PBO:0038879"}


id: SO:1000058
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA point mutation that causes a substitution of an amino acid by an other.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000058 sequence_variant_causing_non_synonymous_codon_change_in_transcript (obsolete SO:1000058)","synonyms":[{"name":"mutation causing non synonymous codon change in transcript","type":"related"},{"name":"non-synonymous codon change in transcript","type":"exact"},{"name":"sequence variant causing non synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000058"}


id: PBO:0005677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C Ptc2","termid":"PBO:0005677"}


id: MOD:00916
data:
  {"annotated_genes":["SJAG_02592","SJAG_02763","SJAG_03012","SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[121497,82575,121591,121593,82574,121592,121498,121590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[82536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00159"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-serine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null,"SJAG_04972":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-serine residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"synonyms":[{"name":"ModSer","type":"exact"}],"termid":"MOD:00916","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null,"MOD:00159":null}}


id: GO:1901627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of postsynaptic membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane organization","termid":"GO:1901626"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of postsynaptic membrane organization","synonyms":[{"name":"down regulation of postsynaptic membrane organisation","type":"exact"},{"name":"down regulation of postsynaptic membrane organization","type":"exact"},{"name":"down-regulation of postsynaptic membrane organisation","type":"exact"},{"name":"down-regulation of postsynaptic membrane organization","type":"exact"},{"name":"downregulation of postsynaptic membrane organisation","type":"exact"},{"name":"downregulation of postsynaptic membrane organization","type":"exact"},{"name":"inhibition of postsynaptic membrane organisation","type":"narrow"},{"name":"inhibition of postsynaptic membrane organization","type":"narrow"},{"name":"negative regulation of post-synaptic membrane organization","type":"exact"},{"name":"negative regulation of postsynaptic membrane organisation","type":"exact"}],"termid":"GO:1901627"}


id: PBO:0086878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcriptional repressor with Zn(2)-Cys(6) finger; negatively regulates transcription in response to oleate levels, based on mutant phenotype and localization to oleate-responsive promoters; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; forms nuclear foci upon DNA replication stress","termid":"PBO:0086878"}


id: PR:O42860
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic checkpoint protein BUB3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:KER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic checkpoint protein BUB3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.08c","secondary_identifiers":["UniProtKB:O42860","PR:000035571"],"synonyms":[{"name":"SPAC23H3.08c","type":"related"},{"name":"Spom972h-BUB3","type":"exact"}],"termid":"PR:O42860"}


id: PBO:0042529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5","termid":"PBO:0042529"}


id: PBO:0074253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO1B3-SLCO1B7 readthrough","termid":"PBO:0074253"}


id: MONDO:0006054
data:
  {"annotated_genes":["SJAG_04885","SJAG_03429","SJAG_00997","SJAG_02748","SJAG_01156","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[89095,86881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[88956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"},{"annotations":[89147,89146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm affecting the male and female reproductive system.","definition_xrefs":["NCIT:C3674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_01156":null,"SJAG_01419":null,"SJAG_02748":null,"SJAG_03429":null,"SJAG_04885":null},"genotype_count":0,"is_obsolete":false,"name":"reproductive system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:64246","UMLS:C0178830","EFO:1000051"],"synonyms":[{"name":"neoplasm of reproductive system","type":"exact"},{"name":"neoplasm of the reproductive system","type":"exact"},{"name":"reproductive neoplasm","type":"exact"},{"name":"reproductive system neoplasm","type":"exact"},{"name":"reproductive system neoplasm (disease)","type":"exact"},{"name":"reproductive system tumor","type":"exact"},{"name":"reproductive system tumour","type":"exact"},{"name":"reproductive tumor","type":"exact"},{"name":"reproductive tumour","type":"exact"},{"name":"tumor of reproductive system","type":"exact"},{"name":"tumor of the reproductive system","type":"exact"},{"name":"tumour of reproductive system","type":"exact"},{"name":"tumour of the reproductive system","type":"exact"}],"termid":"MONDO:0006054","terms_by_termid":{"MONDO:0009050":null,"MONDO:0011962":null,"MONDO:0013872":null,"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0006054"}}}


id: GO:0007286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"part_of","term_name":"spermatid differentiation","termid":"GO:0048515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid development","secondary_identifiers":["Wikipedia:Spermiogenesis"],"synonyms":[{"name":"spermatid cell development","type":"exact"},{"name":"spermiogenesis","type":"exact"}],"termid":"GO:0007286"}


id: GO:0015691
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"}]},"cv_name":"biological_process","definition":"The directed movement of cadmium (Cd) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cadmium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadmium transport","type":"exact"}],"termid":"GO:0015691","terms_by_termid":{"GO:0036249":null}}


id: GO:0015186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-glutamine from one side of a membrane to the other. L-glutamine is 2-amino-4-carbamoylbutanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-glutamine transmembrane transporter activity","synonyms":[{"name":"asparagine/glutamine permease activity","type":"narrow"}],"termid":"GO:0015186"}


id: PBO:0041203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blood vessel epicardial substance","termid":"PBO:0041203"}


id: MOD:02022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-cervonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-cervonoylated residue","termid":"MOD:02023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01875","MOD:01155"],"is_obsolete":false,"name":"N6-cervonoyl-L-lysine","termid":"MOD:02022"}


id: MONDO:0044696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome","secondary_identifiers":["UMLS:C5567229","OMIM:617669","MEDGEN:1798652","GARD:17923","Orphanet:500144"],"synonyms":[{"name":"PEBAS","type":"related"},{"name":"encephalopathy, progressive, early-onset, with brain atrophy and spasticity","type":"related"}],"termid":"MONDO:0044696","xrefs":{"Monarch":{"xref_id":"0044696"}}}


id: MONDO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial tumoral calcinosis","termid":"MONDO:0018891"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"tumoral calcinosis, hyperphosphatemic, familial, 2","secondary_identifiers":["OMIM:617993","MEDGEN:1640532","GARD:16281","EFO:0009383","UMLS:C4693863"],"synonyms":[{"name":"HFTC2","type":"related"},{"name":"tumoral calcinosis, hyperphosphatemic, familial, 2","type":"exact"}],"termid":"MONDO:0060714","xrefs":{"Monarch":{"xref_id":"0060714"}}}


id: GO:0071391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to estrogen","termid":"GO:0043627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to estrogen stimulus","synonyms":[{"name":"cellular response to 17alpha-ethynylestradiol","type":"related"},{"name":"cellular response to oestrogen stimulus","type":"exact"}],"termid":"GO:0071391"}


id: SO:0000765
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000765 cosmid_clone (obsolete SO:0000765)","termid":"SO:0000765"}


id: GO:0140911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An activity in which a protein is inserted into the membrane of another cell where it forms transmembrane pores. Pores disrupts the integrity of the cell membrane, resulting in deregulated ion homeostasis, cellular dysfunction, and can result in cell death.","definition_xrefs":["PMID:25157079","PMID:34387717","PMID:1406491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"pore-forming activity","secondary_identifiers":["GO:0034292","GO:0034290","TC:1.C","GO:0034291"],"synonyms":[{"name":"canonical holin activity","type":"narrow"},{"name":"holin activity","type":"narrow"},{"name":"pinholin activity","type":"narrow"},{"name":"pore forming activity","type":"exact"}],"termid":"GO:0140911"}


id: GO:0052807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aflatoxin + 1,5-dihydrocoenzyme F420 = aflatoxin with reduced furanocoumarin moiety + coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["PMID:20807200","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"aflatoxin reductase (coenzyme F420) activity","synonyms":[{"name":"aflatoxin:coenzyme F420 oxidoreductase activity","type":"exact"},{"name":"aflatoxin:reduced coenzyme F420 reductase activity","type":"exact"},{"name":"coenzyme F420-aflatoxin reductase activity","type":"exact"},{"name":"coenzyme F420-dependent aflatoxin reductase activity","type":"exact"}],"termid":"GO:0052807"}


id: PR:Q9Y7P8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.04c gene.","definition_xrefs":["UniProtKB:Q9Y7P8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C191.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.04c","synonyms":[{"name":"Spom972h-SPCC191.04c","type":"exact"}],"termid":"PR:Q9Y7P8"}


id: PBO:0073959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 8","termid":"PBO:0073959"}


id: MONDO:0004908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete galactosemia (obsolete MONDO:0004908)","termid":"MONDO:0004908","xrefs":{"Monarch":{"xref_id":"0004908"}}}


id: PBO:0011986
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae VAS1","termid":"PBO:0011986"}


id: GO:0046864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of isoprenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Isoprenoids comprise a group of compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"isoprenoid transport","termid":"GO:0046864"}


id: PBO:0038472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 10","termid":"PBO:0038472"}


id: GO:2000040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in axis elongation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in axis elongation (obsolete GO:2000040)","termid":"GO:2000040"}


id: PBO:0044329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 10","termid":"PBO:0044329"}


id: GO:0018897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the sulfur atom from dibenzothiophene, a substance composed of two benzene rings linked by one sulfide bond and one carbon-carbon bond.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibenzothiophene metabolic process","termid":"GO:0018895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"dibenzothiophene desulfurization","secondary_identifiers":["MetaCyc:PWY-681","UM-BBD_pathwayID:dbt"],"synonyms":[{"name":"dibenzothiophene desulphurization","type":"exact"}],"termid":"GO:0018897"}


id: PBO:0031043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_organization_during_vegetative_growth","termid":"PBO:0031043"}


id: GO:0034349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a glial cell, a non-neuronal cell of the nervous system.","definition_xrefs":["GOC:sart","GOC:mtg_apoptosis","CL:0000125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell apoptotic process","synonyms":[{"name":"apoptosis of glia","type":"exact"},{"name":"apoptosis of glial cells","type":"exact"},{"name":"glia apoptosis","type":"exact"},{"name":"glia programmed cell death by apoptosis","type":"exact"},{"name":"glial cell apoptosis","type":"narrow"},{"name":"glial cell programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of glia by apoptosis","type":"exact"},{"name":"programmed cell death of glial cells by apoptosis","type":"exact"},{"name":"programmed cell death, glia","type":"exact"},{"name":"programmed cell death, glial cells","type":"exact"}],"termid":"GO:0034349"}


id: PBO:0080157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valosin containing protein interacting protein 1","termid":"PBO:0080157"}


id: MONDO:0013225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital generalized lipodystrophy in which the cause of the disease is a mutation in the CAVIN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"congenital generalized lipodystrophy type 4","secondary_identifiers":["Orphanet:228429","MESH:C567642","OMIM:613327","MEDGEN:412871","GARD:10937","DOID:0111138","UMLS:C2750069"],"synonyms":[{"name":"BSCL4","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy type 4 with muscular dystrophy","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy, type 4, with muscular dystrophy","type":"related"},{"name":"CAVIN1 congenital generalised lipodystrophy (disease)","type":"exact"},{"name":"CAVIN1 congenital generalized lipodystrophy (disease)","type":"exact"},{"name":"CGL4","type":"exact"},{"name":"GCL4","type":"exact"},{"name":"congenital generalised lipodystrophy (disease) caused by mutation in CAVIN1","type":"exact"},{"name":"congenital generalized lipodystrophy (disease) caused by mutation in CAVIN1","type":"exact"},{"name":"generalised congenital lipodystrophy type 4","type":"exact"},{"name":"generalised congenital lipodystrophy with myopathy","type":"exact"},{"name":"generalized congenital lipodystrophy type 4","type":"exact"},{"name":"generalized congenital lipodystrophy with myopathy","type":"exact"},{"name":"lipodystrophy, Berardinelli-Seip congenital, type 4, with muscular dystrophy","type":"related"},{"name":"lipodystrophy, congenital generalized, type 4","type":"related"}],"termid":"MONDO:0013225","xrefs":{"Monarch":{"xref_id":"0013225"}}}


id: MONDO:0013598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myostatin-related muscle hypertrophy is a rare condition characterized by reduced body fat and increased muscle size. Affected individuals have up to twice the usual amount of muscle mass in their bodies. They also tend to have increased muscle strength. This condition is not known to cause any medical problems, and affected individuals are intellectually normal. Myostatin-related muscle hypertrophy is caused by mutations in the MSTN gene. It follows an incomplete autosomal dominant pattern of inheritance.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myostatin-related muscle hypertrophy","secondary_identifiers":["SCTID:699185005","DOID:0111072","MEDGEN:418994","Orphanet:275534","HGNC:4223","OMIM:614160","ICD9:756.89","MESH:C536106","UMLS:C2931112"],"synonyms":[{"name":"MSLHP","type":"exact"},{"name":"muscle hypertrophy","type":"related"}],"termid":"MONDO:0013598","xrefs":{"Monarch":{"xref_id":"0013598"}}}


id: FYPO:0004313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CENP-A containing chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to CENP-A containing chromatin","termid":"FYPO:0004311"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to CENP-A containing chromatin","synonyms":[{"name":"decreased protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"decreased protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric core region chromatin","type":"exact"},{"name":"reduced protein localization to CENP-A containing chromatin","type":"exact"}],"termid":"FYPO:0004313"}


id: PBO:0035715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_methylation_during_vegetative_growth","termid":"PBO:0035715"}


id: PBO:0064706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 42","termid":"PBO:0064706"}


id: GO:1905828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of prostaglandin catabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:12432938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"prostaglandin catabolic process","termid":"GO:1905344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of prostaglandin catabolic process","synonyms":[{"name":"regulation of prostaglandin breakdown","type":"exact"},{"name":"regulation of prostaglandin catabolism","type":"exact"},{"name":"regulation of prostaglandin degradation","type":"exact"}],"termid":"GO:1905828"}


id: MONDO:0013539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukotriene C4 synthase deficiency is an extremely rare fatal neurometabolic developmental disorder characterized clinically by muscular hypotonia, psychomotor retardation, failure to thrive, and microcephaly.","definition_xrefs":["Orphanet:79507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypotonia-failure to thrive-microcephaly syndrome","secondary_identifiers":["UMLS:C3279662","GARD:16725","OMIM:614037","MEDGEN:481292","MESH:C565439","SCTID:717185008"],"synonyms":[{"name":"LTC4 synthase deficiency","type":"exact"},{"name":"leukotriene C4 synthase deficiency","type":"exact"}],"termid":"MONDO:0013539","xrefs":{"Monarch":{"xref_id":"0013539"}}}


id: MONDO:0001639
data:
  {"annotated_genes":["SJAG_04425","SJAG_03447","SJAG_04459","SJAG_01199","SJAG_04042","SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[87085,87084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[88513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[86930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_01199":null,"SJAG_03447":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"deficiency anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:508256","ICD9:281.8","ICD9:281.9","DOID:13121","SCTID:267513007","UMLS:C0041782"],"synonyms":[{"name":"deficiency anemias","type":"exact"},{"name":"unspecified deficiency anaemia","type":"exact"},{"name":"unspecified deficiency anemia","type":"exact"}],"termid":"MONDO:0001639","terms_by_termid":{"MONDO:0008787":null,"MONDO:0009238":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0001639"}}}


id: GO:0050041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate = acetaldehyde + formate.","definition_xrefs":["EC:4.1.2.36","RHEA:17909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lactate aldolase activity","secondary_identifiers":["MetaCyc:LACTATE-ALDOLASE-RXN","KEGG_REACTION:R00753"],"synonyms":[{"name":"(S)-lactate acetaldehyde-lyase (formate-forming)","type":"related"},{"name":"(S)-lactate acetaldehyde-lyase activity","type":"related"},{"name":"lactate synthase activity","type":"related"}],"termid":"GO:0050041"}


id: GO:0004448
data:
  {"annotated_genes":["SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004450"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NAD(P)+ = 2-oxoglutarate + CO2 + NAD(P)H.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"IDH activity","type":"related"},{"name":"IDP activity","type":"related"},{"name":"isocitrate dehydrogenase activity","type":"exact"},{"name":"isocitric acid dehydrogenase activity","type":"exact"},{"name":"isocitric dehydrogenase activity","type":"exact"},{"name":"oxalosuccinate carboxylase activity","type":"exact"},{"name":"oxalosuccinate decarboxylase activity","type":"exact"},{"name":"oxalosuccinic decarboxylase activity","type":"exact"}],"termid":"GO:0004448","terms_by_termid":{"GO:0004450":null}}


id: MONDO:1012918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ataxia that occurs in dogs due to a mutation in the HACE1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary ataxia, non-human animal","termid":"MONDO:1012959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia, HACE1-related, dog","secondary_identifiers":["OMIA:002522-9615"],"termid":"MONDO:1012918","xrefs":{"Monarch":{"xref_id":"1012918"}}}


id: PBO:0082672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the dynactin complex; localized to the pointed end of the Arp1p filament; may regulate membrane association of the complex","termid":"PBO:0082672"}


id: GO:0072249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric glomerular visceral epithelial cell over time, from its formation to the mature structure. A metanephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"podocyte development","termid":"GO:0072015"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelial cell development","termid":"GO:0072313"},{"relation_name":"part_of","term_name":"metanephric podocyte differentiation","termid":"GO:0072248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric podocyte development","synonyms":[{"name":"metanephric glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:0072249"}


id: MONDO:0016555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"transient congenital hypothyroidism","termid":"MONDO:0015792"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient congenital hypothyroidism due to maternal factor","secondary_identifiers":["UMLS:C5680929","Orphanet:238696","GARD:20645","MEDGEN:1842783"],"termid":"MONDO:0016555","xrefs":{"Monarch":{"xref_id":"0016555"}}}


id: MONDO:0003639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the hilar region of the lung.","definition_xrefs":["NCIT:C5671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung hilum neoplasm","secondary_identifiers":["MEDGEN:224849","SCTID:126707007","DOID:5767","UMLS:C1290358"],"synonyms":[{"name":"hilar lung neoplasm","type":"exact"},{"name":"hilar lung tumor","type":"exact"},{"name":"hilar lung tumour","type":"exact"},{"name":"lung hilum neoplasm","type":"exact"},{"name":"lung hilum tumor","type":"exact"},{"name":"lung hilum tumour","type":"exact"},{"name":"lung hilus neoplasm","type":"exact"},{"name":"lung hilus neoplasm (disease)","type":"exact"},{"name":"lung hilus tumor","type":"exact"},{"name":"lung hilus tumour","type":"exact"},{"name":"neoplasm of hilus of lung","type":"exact"},{"name":"neoplasm of lung hilus","type":"exact"},{"name":"tumor of lung hilus","type":"exact"},{"name":"tumour of lung hilus","type":"exact"}],"termid":"MONDO:0003639","xrefs":{"Monarch":{"xref_id":"0003639"}}}


id: PBO:0092009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Methionine (cau), mitochondrial","termid":"PBO:0092009"}


id: GO:0032404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mismatch repair complex binding","termid":"GO:0032404"}


id: MONDO:1010929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotubular myopathy 1 that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotubular myopathy 1, non-human animal","termid":"MONDO:1010202"},{"relation_name":"is_a","term_name":"congenital myopathy, dog","termid":"MONDO:1010918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubular myopathy 1, dog","secondary_identifiers":["OMIA:001508-9615"],"termid":"MONDO:1010929","xrefs":{"Monarch":{"xref_id":"1010929"}}}


id: PBO:0087839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Third subunit of DNA polymerase delta; involved in chromosomal DNA replication; required for error-prone DNA synthesis in the presence of DNA damage and processivity; forms a complex with Rev3p, Rev7p and Pol31p; interacts with Hys2p, PCNA (Pol30p), and Pol1p","termid":"PBO:0087839"}


id: PBO:0116227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane queuine and queuosine transmembrane importer, Qtp1","termid":"PBO:0116227"}


id: PBO:0047507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FER1L6 antisense RNA 2","termid":"PBO:0047507"}


id: PBO:0060889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropilin and tolloid like 1","termid":"PBO:0060889"}


id: MONDO:0002730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A kidney neoplasm that occurs during childhood.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"childhood kidney neoplasm","secondary_identifiers":["UMLS:C1333003","NCIT:C6563","DOID:3675","MEDGEN:232356"],"synonyms":[{"name":"childhood kidney neoplasm","type":"exact"},{"name":"childhood kidney tumor","type":"exact"},{"name":"childhood kidney tumour","type":"exact"},{"name":"childhood renal neoplasm","type":"exact"},{"name":"childhood renal tumor","type":"exact"},{"name":"childhood renal tumour","type":"exact"},{"name":"kidney neoplasm","type":"broad"},{"name":"kidney neoplasm of childhood","type":"exact"},{"name":"paediatric kidney neoplasm","type":"exact"},{"name":"paediatric kidney tumour","type":"exact"},{"name":"paediatric renal neoplasm","type":"exact"},{"name":"paediatric renal tumour","type":"exact"},{"name":"pediatric kidney neoplasm","type":"exact"},{"name":"pediatric kidney tumor","type":"exact"},{"name":"pediatric renal neoplasm","type":"exact"},{"name":"pediatric renal tumor","type":"exact"}],"termid":"MONDO:0002730","xrefs":{"Monarch":{"xref_id":"0002730"}}}


id: PBO:0056802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 1","termid":"PBO:0056802"}


id: PBO:0002693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication termination factor Rtf1","termid":"PBO:0002693"}


id: GO:0051795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hair follicle maturation","termid":"GO:0048818"},{"relation_name":"is_a","term_name":"regulation of timing of catagen","termid":"GO:0051794"},{"relation_name":"positively_regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of timing of catagen","synonyms":[{"name":"activation of catagen","type":"narrow"},{"name":"positive regulation of catagen","type":"related"},{"name":"stimulation of catagen","type":"narrow"},{"name":"up regulation of catagen","type":"related"},{"name":"up-regulation of catagen","type":"related"},{"name":"upregulation of catagen","type":"related"}],"termid":"GO:0051795"}


id: PBO:0050928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 5","termid":"PBO:0050928"}


id: PBO:0049040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 32","termid":"PBO:0049040"}


id: GO:1904077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrogen biosynthetic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24530842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"regulation of estrogen biosynthetic process","termid":"GO:1904076"},{"relation_name":"negatively_regulates","term_name":"estrogen biosynthetic process","termid":"GO:0006703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of estrogen biosynthetic process","synonyms":[{"name":"down regulation of estrogen anabolism","type":"exact"},{"name":"down regulation of estrogen biosynthesis","type":"exact"},{"name":"down regulation of estrogen biosynthetic process","type":"exact"},{"name":"down regulation of estrogen formation","type":"exact"},{"name":"down regulation of estrogen synthesis","type":"exact"},{"name":"down regulation of oestrogen biosynthesis","type":"exact"},{"name":"down regulation of oestrogen biosynthetic process","type":"exact"},{"name":"down-regulation of estrogen anabolism","type":"exact"},{"name":"down-regulation of estrogen biosynthesis","type":"exact"},{"name":"down-regulation of estrogen biosynthetic process","type":"exact"},{"name":"down-regulation of estrogen formation","type":"exact"},{"name":"down-regulation of estrogen synthesis","type":"exact"},{"name":"down-regulation of oestrogen biosynthesis","type":"exact"},{"name":"down-regulation of oestrogen biosynthetic process","type":"exact"},{"name":"downregulation of estrogen anabolism","type":"exact"},{"name":"downregulation of estrogen biosynthesis","type":"exact"},{"name":"downregulation of estrogen biosynthetic process","type":"exact"},{"name":"downregulation of estrogen formation","type":"exact"},{"name":"downregulation of estrogen synthesis","type":"exact"},{"name":"downregulation of oestrogen biosynthesis","type":"exact"},{"name":"downregulation of oestrogen biosynthetic process","type":"exact"},{"name":"inhibition of estrogen anabolism","type":"narrow"},{"name":"inhibition of estrogen biosynthesis","type":"narrow"},{"name":"inhibition of estrogen biosynthetic process","type":"narrow"},{"name":"inhibition of estrogen formation","type":"narrow"},{"name":"inhibition of estrogen synthesis","type":"narrow"},{"name":"inhibition of oestrogen biosynthesis","type":"narrow"},{"name":"inhibition of oestrogen biosynthetic process","type":"narrow"},{"name":"negative regulation of estrogen anabolism","type":"exact"},{"name":"negative regulation of estrogen biosynthesis","type":"exact"},{"name":"negative regulation of estrogen formation","type":"exact"},{"name":"negative regulation of estrogen synthesis","type":"exact"},{"name":"negative regulation of oestrogen biosynthesis","type":"exact"},{"name":"negative regulation of oestrogen biosynthetic process","type":"exact"}],"termid":"GO:1904077"}


id: GO:0102543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: epsilon-rhodomycinone + H2O = 15-demethoxy-epsilon-rhodomycinone + methanol + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete epsilon-rhodomycinone methylesterase activity (obsolete GO:0102543)","termid":"GO:0102543"}


id: MONDO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders that include recurrent, intense sexually arousing fantasies, sexual urges, or behaviors generally involving nonhuman objects, suffering of oneself or partners, or children or other nonconsenting partners. (from DSM-V)","definition_xrefs":["MESH:D010262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychosexual disorder","termid":"MONDO:0000947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraphilic disorder","secondary_identifiers":["DOID:0060044","SCTID:50299009","MEDGEN:18299","UMLS:C0030482"],"synonyms":[{"name":"Deviations, Sex","type":"related"},{"name":"Paraphilias","type":"related"},{"name":"Sex Deviations","type":"related"},{"name":"Sex deviation","type":"related"},{"name":"deviation, Sex","type":"related"},{"name":"disorder of sexual preference","type":"exact"},{"name":"disorder, Paraphilic","type":"exact"},{"name":"disorders, Paraphilic","type":"exact"},{"name":"paraphilia","type":"related"},{"name":"paraphilia disorder","type":"exact"},{"name":"paraphilic disorder","type":"exact"}],"termid":"MONDO:0000596","xrefs":{"Monarch":{"xref_id":"0000596"}}}


id: GO:1900566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of chanoclavine-I.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete chanoclavine-I biosynthetic process (obsolete GO:1900566)","synonyms":[{"name":"chanoclavine-I anabolism","type":"exact"},{"name":"chanoclavine-I biosynthesis","type":"exact"},{"name":"chanoclavine-I formation","type":"exact"},{"name":"chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900566"}


id: GO:0050439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + glyoxylate + H+ = 2-hydroxy-3-oxoadipate + CO2.","definition_xrefs":["EC:2.2.1.5","RHEA:14341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016744","GO:0016740"],"is_obsolete":false,"name":"2-hydroxy-3-oxoadipate synthase activity","secondary_identifiers":["MetaCyc:2-HYDROXY-3-OXOADIPATE-SYNTHASE-RXN","KEGG_REACTION:R00474"],"synonyms":[{"name":"2-hydroxy-3-oxoadipate glyoxylate-lyase (carboxylating) activity","type":"related"},{"name":"2-hydroxy-3-oxoadipate synthetase activity","type":"related"},{"name":"2-oxoglutarate:glyoxylate succinaldehydetransferase (decarboxylating)","type":"related"},{"name":"alpha-ketoglutaric-glyoxylic carboligase activity","type":"related"},{"name":"oxoglutarate: glyoxylate carboligase activity","type":"related"},{"name":"oxoglutarate:glyoxylate carboligase activity","type":"related"}],"termid":"GO:0050439"}


id: GO:1903456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of androst-4-ene-3,17-dione biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:24399684","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of androst-4-ene-3,17-dione biosynthetic process","termid":"GO:1903454"},{"relation_name":"positively_regulates","term_name":"androst-4-ene-3,17-dione biosynthetic process","termid":"GO:1903449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of androst-4-ene-3,17-dione biosynthetic process","synonyms":[{"name":"activation of androst-4-ene-3,17-dione anabolism","type":"narrow"},{"name":"activation of androst-4-ene-3,17-dione biosynthesis","type":"narrow"},{"name":"activation of androst-4-ene-3,17-dione biosynthetic process","type":"narrow"},{"name":"activation of androst-4-ene-3,17-dione formation","type":"narrow"},{"name":"activation of androst-4-ene-3,17-dione synthesis","type":"narrow"},{"name":"activation of androstenedione","type":"narrow"},{"name":"positive regulation of androst-4-ene-3,17-dione anabolism","type":"exact"},{"name":"positive regulation of androst-4-ene-3,17-dione biosynthesis","type":"exact"},{"name":"positive regulation of androst-4-ene-3,17-dione formation","type":"exact"},{"name":"positive regulation of androst-4-ene-3,17-dione synthesis","type":"exact"},{"name":"positive regulation of androstenedione biosynthetic process","type":"exact"},{"name":"up regulation of androst-4-ene-3,17-dione anabolism","type":"exact"},{"name":"up regulation of androst-4-ene-3,17-dione biosynthesis","type":"exact"},{"name":"up regulation of androst-4-ene-3,17-dione biosynthetic process","type":"exact"},{"name":"up regulation of androst-4-ene-3,17-dione formation","type":"exact"},{"name":"up regulation of androst-4-ene-3,17-dione synthesis","type":"exact"},{"name":"up regulation of androstenedione biosynthetic process","type":"exact"},{"name":"up-regulation of androst-4-ene-3,17-dione anabolism","type":"exact"},{"name":"up-regulation of androst-4-ene-3,17-dione biosynthesis","type":"exact"},{"name":"up-regulation of androst-4-ene-3,17-dione biosynthetic process","type":"exact"},{"name":"up-regulation of androst-4-ene-3,17-dione formation","type":"exact"},{"name":"up-regulation of androst-4-ene-3,17-dione synthesis","type":"exact"},{"name":"up-regulation of androstenedione biosynthetic process","type":"exact"},{"name":"upregulation of androst-4-ene-3,17-dione anabolism","type":"exact"},{"name":"upregulation of androst-4-ene-3,17-dione biosynthesis","type":"exact"},{"name":"upregulation of androst-4-ene-3,17-dione biosynthetic process","type":"exact"},{"name":"upregulation of androst-4-ene-3,17-dione formation","type":"exact"},{"name":"upregulation of androst-4-ene-3,17-dione synthesis","type":"exact"},{"name":"upregulation of androstenedione biosynthetic process","type":"exact"}],"termid":"GO:1903456"}


id: GO:0005534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to aldohexose galactose (galacto-hexose), a common constituent of many oligo- and polysaccharides.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"galactose binding","synonyms":[{"name":"galactose binding lectin","type":"related"}],"termid":"GO:0005534"}


id: FYPO:0005604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Rad52 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PMID:27098497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of Rad52 focus presence during vegetative growth","termid":"FYPO:0007191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Rad52 foci during cellular response to ionizing radiation","type":"related"},{"name":"increased duration of Rad22 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Rad52 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Rad52 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005604"}


id: CHEBI:50398
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinamic acid","termid":"CHEBI:50398"}


id: MONDO:0005695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of arteries in the central nervous system that occurs in patients with acquired immunodeficiency syndrome or aids-related opportunistic infections.","definition_xrefs":["MESH:D020943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"},{"relation_name":"is_a","term_name":"HIV infectious disease","termid":"MONDO:0005109"},{"relation_name":"is_a","term_name":"viral infection of central nervous system","termid":"MONDO:0024318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system AIDS arteritis","secondary_identifiers":["MEDGEN:156263","UMLS:C0752330"],"synonyms":[{"name":"AIDS associated cerebral aneurysmal arteriopathy","type":"exact"},{"name":"AIDS-associated cerebral aneurysmal arteriopathy","type":"exact"},{"name":"CNS Vasculitides, HIV-1-associated","type":"exact"},{"name":"CNS Vasculitides, HIV-associated","type":"exact"},{"name":"CNS vasculitis, HIV associated","type":"exact"},{"name":"CNS vasculitis, HIV-1-associated","type":"exact"},{"name":"CNS vasculitis, HIV-associated","type":"exact"},{"name":"HIV 1 associated CNS vasculitis","type":"exact"},{"name":"HIV associated vasculitis of the central nervous system","type":"exact"},{"name":"HIV-1-associated CNS Vasculitides","type":"exact"},{"name":"HIV-1-associated CNS vasculitis","type":"exact"},{"name":"HIV-associated CNS Vasculitides","type":"exact"},{"name":"HIV-associated CNS vasculitis","type":"exact"},{"name":"HIV-associated vasculitis of the central nervous system","type":"exact"},{"name":"Vasculitides, HIV-1-associated CNS","type":"exact"},{"name":"Vasculitides, HIV-associated CNS","type":"exact"},{"name":"central nervous system AIDS arteritis","type":"exact"},{"name":"cerebral aneurysmal arteriopathy, AIDS associated","type":"exact"},{"name":"cerebral aneurysmal arteriopathy, AIDS-associated","type":"exact"},{"name":"vasculitis of the central nervous system, HIV associated","type":"exact"},{"name":"vasculitis of the central nervous system, HIV-associated","type":"exact"},{"name":"vasculitis, HIV-1-associated CNS","type":"exact"},{"name":"vasculitis, HIV-associated CNS","type":"exact"}],"termid":"MONDO:0005695","xrefs":{"Monarch":{"xref_id":"0005695"}}}


id: PBO:0050851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)","termid":"PBO:0050851"}


id: PBO:0027575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_endoplasmic_reticulum_tubular_network","termid":"PBO:0027575"}


id: MONDO:0020802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A neoplasm composed of basal cells that metastasizes to other anatomic sites.","definition_xrefs":["NCIT:C7586"],"gene_count":0,"genotype_count":0,"name":"obsolete basal cell cancer (obsolete MONDO:0020802)","termid":"MONDO:0020802","xrefs":{"Monarch":{"xref_id":"0020802"}}}


id: GO:0071216
data:
  {"annotated_genes":["SJAG_01837","SJAG_00082","SJAG_01805","SJAG_04140","SJAG_03048","SJAG_04332","SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91844,104299,113183,118684,95670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[106082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[104310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[104311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[96421,104312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to biotic stress","type":"narrow"}],"termid":"GO:0071216","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0140429":null,"GO:1990820":null}}


id: PBO:0067998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 300","termid":"PBO:0067998"}


id: MONDO:0014191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any catecholaminergic polymorphic ventricular tachycardia in which the cause of the disease is a mutation in the TRDN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholaminergic polymorphic ventricular tachycardia","termid":"MONDO:0017990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"catecholaminergic polymorphic ventricular tachycardia 5","secondary_identifiers":["GARD:15967","OMIM:615441","UMLS:C3809536","DOID:0060679","ICD10CM:I47.2","MEDGEN:815866"],"synonyms":[{"name":"CPVT5","type":"related"},{"name":"CVPT5","type":"exact"},{"name":"TRDN catecholaminergic polymorphic ventricular tachycardia","type":"exact"},{"name":"cardiac arrhythmia syndrome, with or without skeletal muscle weakness","type":"exact"},{"name":"catecholaminergic polymorphic ventricular tachycardia 5","type":"exact"},{"name":"catecholaminergic polymorphic ventricular tachycardia caused by mutation in TRDN","type":"exact"},{"name":"catecholaminergic polymorphic ventricular tachycardia type 5","type":"exact"},{"name":"ventricular tachycardia, catecholaminergic polymorphic, 5, with or without muscle weakness","type":"related"}],"termid":"MONDO:0014191","xrefs":{"Monarch":{"xref_id":"0014191"}}}


id: MONDO:0023833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal choroiditis (MFC) is an inflammatory disorder characterized by swelling of the eye (called uveitis) and multiple lesions in the choroid, a layer of blood vessels between the white of the eye and the retina. Symptoms include blurry vision, floaters, sensitivity to light, blind spots and mild eye discomfort. Though the cause is unknown, multifocal choroiditis is seen most frequently in women ages 20 to 60, and usually affects both eyes. MFC is generally treated with steroid medication that can be taken orally or injected into the eye. Multifocal choroiditis is a chronic condition, thus symptoms may return or worsen even after successful treatment.","definition_xrefs":["GARD:0009824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choroiditis","termid":"MONDO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"multifocal choroiditis","secondary_identifiers":["MEDGEN:288551","MESH:D000080364","SCTID:414783007","UMLS:C1533060","icd11.foundation:1197219411","MESH:C537374","GARD:9824"],"termid":"MONDO:0023833","xrefs":{"Monarch":{"xref_id":"0023833"}}}


id: MONDO:0017658
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044330"}]},"cv_name":"mondo","definition":"A neurologic disorder classically characterized by pronounced startle responses to tactile or acoustic stimuli and hypertonia","definition_xrefs":["Wikipedia:Hyperekplexia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"is_obsolete":false,"name":"hyperekplexia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0234166","MEDGEN:488800","GARD:21281","MESH:D000071017","Orphanet:306773"],"termid":"MONDO:0017658","terms_by_termid":{"MONDO:0044330":null},"xrefs":{"Monarch":{"xref_id":"0017658"}}}


id: PBO:0047044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 107 member A","termid":"PBO:0047044"}


id: PBO:0052016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 6, arginine demethylase and lysine hydroxylase","termid":"PBO:0052016"}


id: PBO:0050479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A7","termid":"PBO:0050479"}


id: GO:0030903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord development","termid":"GO:0030903"}


id: PBO:0027873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_UV","termid":"PBO:0027873"}


id: PBO:0011508
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactic acidosis and hyperpyruvatemia","termid":"PBO:0011508"}


id: PR:Q12238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uvi31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q12238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV-induced protein uvi31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.06c","synonyms":[{"name":"Spom972h-uvi31","type":"exact"}],"termid":"PR:Q12238"}


id: GO:0003880
data:
  {"annotated_genes":["SJAG_05016","SJAG_02660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018423"},{"annotations":[77216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004671"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the oxygen atom of a carboxyl group at the C-terminal of a protein.","definition_xrefs":["PMID:8428937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carboxyl O-methyltransferase activity","termid":"GO:0051998"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02660":null,"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016741","GO:0003824","GO:0008276","GO:0016740"],"is_obsolete":false,"name":"protein C-terminal carboxyl O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"C-terminal protein carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0003880","terms_by_termid":{"GO:0004671":null,"GO:0018423":null}}


id: MONDO:0011078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, congenital malformation syndrome characterized by the association of anterior ocular chamber cleavage disorder with developmental delay, short stature and congenital hypothyroidism. Additional manifestations include cerebellar hypoplasia, tracheal stenosis, narrow external auditory meatus, and hip dislocation. There have been no further description in the literature since 1995.","definition_xrefs":["Orphanet:2321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior chamber cleavage disorder, cerebellar hypoplasia, hypothyroidism, and tracheal stenosis","secondary_identifiers":["OMIM:601427","MEDGEN:316973","UMLS:C1832362","GARD:3062","MESH:C537694"],"synonyms":[{"name":"Jung Wolff back Stahl syndrome","type":"related"},{"name":"anterior chamber cleavage disorder, cerebellar hypoplasia, hypothyroidism, and tracheal stenosis","type":"exact"}],"termid":"MONDO:0011078","xrefs":{"Monarch":{"xref_id":"0011078"}}}


id: PBO:0031861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_component_organization","termid":"PBO:0031861"}


id: MONDO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrofacial dysostosis (obsolete MONDO:0000760)","termid":"MONDO:0000760","xrefs":{"Monarch":{"xref_id":"0000760"}}}


id: PBO:0087397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress-induced Rab family GTPase; required for vacuolar protein sorting and endocytosis; involved in ionic stress tolerance; similar to Vps21p and Ypt52p; functional homolog of Vps21p; mammalian Rab5 homolog; YPT53 has a paralog, VPS21, that arose from the whole genome duplication","termid":"PBO:0087397"}


id: PBO:0004571
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localizes to DNA damage foci","termid":"PBO:0004571"}


id: MONDO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypersensitivity pneumonitis caused by the repeated exposure and inhalation of biological dust (such as hay dust, mold spores, or other agricultural products). It is considered a type II hypersensitivity inflammatory reaction. In the acute phase, signs and symptoms include fever, chills, cough, dyspnea, headache, and chest tightness. The subacute phase manifests as chronic cough, dyspnea, anorexia, and weight loss. The chronic phase results from the prolonged exposure to the antigen and is characterized by severe dyspnea and irreversible damage to the lungs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"},{"relation_name":"is_a","term_name":"occupational lung disease","termid":"MONDO:0022736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"farmer's lung disease","secondary_identifiers":["DOID:14453","GARD:6427","MEDGEN:8785","icd11.foundation:666590509","UMLS:C0015634","NCIT:C34605","Orphanet:99906","SCTID:18690003","MedDRA:10016221","ICD9:495.0"],"synonyms":[{"name":"Farmers lung","type":"exact"},{"name":"farmer lung","type":"exact"},{"name":"farmer's lung","type":"exact"}],"termid":"MONDO:0001971","xrefs":{"Monarch":{"xref_id":"0001971"}}}


id: MONDO:1010280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Priapism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priapism, non-human animal","secondary_identifiers":["OMIA:001166"],"termid":"MONDO:1010280","xrefs":{"Monarch":{"xref_id":"1010280"}}}


id: GO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a myeloid leukocyte resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid leukocyte activation","synonyms":[{"name":"myeloid leucocyte activation","type":"exact"}],"termid":"GO:0002274"}


id: PR:Q9HGK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A homologous-pairing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00387","PANTHER:PTHR15938:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous-pairing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.15","secondary_identifiers":["UniProtKB:Q9HGK2"],"synonyms":[{"name":"Spom972h-PSMC3IP","type":"exact"},{"name":"meiotic expression up-regulated protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGK2"}


id: GO:1901926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cadinene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cadinene metabolic process","synonyms":[{"name":"cadinene metabolism","type":"exact"}],"termid":"GO:1901926"}


id: PBO:0003792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc13","termid":"PBO:0003792"}


id: GO:0180036
data:
  {"annotated_genes":["SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120132],"is_not":false,"summary":null,"term":"GO:0180036"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant lncRNAs within the nucleus.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"is_a","term_name":"lncRNA catabolic process","termid":"GO:0110064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear lncRNA surveillance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180036","terms_by_termid":{"GO:0180036":null}}


id: PBO:0064086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITPNA antisense RNA 1","termid":"PBO:0064086"}


id: PBO:0043083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 3 subunit","termid":"PBO:0043083"}


id: PR:O13770
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C17A5.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.08","synonyms":[{"name":"Spom972h-erp2","type":"exact"}],"termid":"PR:O13770"}


id: PBO:0086846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pyridoxine 4-dehydrogenase; differentially expressed during alcoholic fermentation; expression activated by transcription factor YRM1/YOR172W; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086846"}


id: PBO:0018083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribose methyltransferase Mrm1 (predicted)","termid":"PBO:0018083"}


id: PBO:0039310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 4, lysine demethylase","termid":"PBO:0039310"}


id: PBO:0053848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1117","termid":"PBO:0053848"}


id: GO:0008570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP by myosin that provides the energy for actomyosin contraction.","definition_xrefs":["EC:3.6.4.1"],"gene_count":0,"genotype_count":0,"name":"obsolete myosin ATPase activity (obsolete GO:0008570)","synonyms":[{"name":"myosin ATPase activity","type":"exact"}],"termid":"GO:0008570"}


id: GO:0060737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differential increase in size or mass of the prostate gland that contributes to the gland attaining its form.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"is_a","term_name":"prostate gland growth","termid":"GO:0060736"},{"relation_name":"part_of","term_name":"prostate gland morphogenesis","termid":"GO:0060512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate gland morphogenetic growth","synonyms":[{"name":"prostate gland growth involved in morphogenesis","type":"exact"}],"termid":"GO:0060737"}


id: GO:0102049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-methionine + ATP(4-) = H+ + indole-3-acetyl-methionine + AMP(2-) + diphosphoric acid.","definition_xrefs":["PMID:15659623","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetyl-methionine synthetase activity","secondary_identifiers":["MetaCyc:RXN-10431"],"termid":"GO:0102049"}


id: PBO:0069968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1263, pseudogene","termid":"PBO:0069968"}


id: PBO:0085274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal integral membrane protein; involved in negative regulation of peroxisome size; partially functionally redundant with Pex30p and Pex32p; probably acts at a step downstream of steps mediated by Pex28p and Pex29p; PEX31 has a paralog, PEX30, that arose from the whole genome duplication","termid":"PBO:0085274"}


id: GO:0106138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Sec61 translocon complex.","definition_xrefs":["GOC:pga","PMID:9792704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Sec61 translocon complex binding","termid":"GO:0106138"}


id: GO:0036484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of trunk neural crest cells from the neural tube to other locations in the vertebrate embryo.","definition_xrefs":["GOC:PARL","PMID:2387238","GOC:mat","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration","termid":"GO:0001755"},{"relation_name":"part_of","term_name":"trunk segmentation","termid":"GO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trunk neural crest cell migration","synonyms":[{"name":"trunk NCC migration","type":"exact"}],"termid":"GO:0036484"}


id: PBO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 2 Dlp1","termid":"PBO:0002346"}


id: PBO:0085065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of the NuA4 acetyltransferase complex; Esa1p-associated factor; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085065"}


id: PBO:0051122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-9 (non-functional)","termid":"PBO:0051122"}


id: MONDO:0024623
data:
  {"annotated_genes":["SJAG_00731","SJAG_00863","SJAG_03578","SJAG_01444"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[88858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013385"},{"annotations":[87516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009558"},{"annotations":[87192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030067"}]},"cv_name":"mondo","definition":"Pathological processes of the ear, the nose, and the throat, also known as the ENT diseases.","definition_xrefs":["MESH:D010038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00731":null,"SJAG_00863":null,"SJAG_01444":null,"SJAG_03578":null},"genotype_count":0,"is_obsolete":false,"name":"otorhinolaryngologic disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0395797","MEDGEN:583054","NANDO:1100015","SCTID:232208008","ICD9:478.19","NCIT:C118420"],"synonyms":[{"name":"ENT disease","type":"related"},{"name":"ENT diseases","type":"related"},{"name":"disease, ENT","type":"related"},{"name":"disease, otolaryngologic","type":"related"},{"name":"disease, otolaryngological","type":"related"},{"name":"disease, otorhinolaryngologic","type":"related"},{"name":"disease, otorhinolaryngological","type":"related"},{"name":"diseases, ENT","type":"related"},{"name":"diseases, otolaryngologic","type":"related"},{"name":"diseases, otolaryngological","type":"related"},{"name":"diseases, otorhinolaryngologic","type":"related"},{"name":"diseases, otorhinolaryngological","type":"related"},{"name":"ear, nose and throat disorder","type":"exact"},{"name":"ear, nose or throat disorder","type":"exact"},{"name":"ear/nose/throat disease","type":"exact"},{"name":"otolaryngologic disease","type":"related"},{"name":"otolaryngologic diseases","type":"related"},{"name":"otolaryngologic disorder","type":"exact"},{"name":"otolaryngological disease","type":"related"},{"name":"otolaryngological diseases","type":"related"},{"name":"otorhinolaryngologic disease","type":"exact"},{"name":"otorhinolaryngological disease","type":"related"},{"name":"otorhinolaryngological diseases","type":"related"}],"termid":"MONDO:0024623","terms_by_termid":{"MONDO:0009558":null,"MONDO:0013385":null,"MONDO:0030067":null,"MONDO:0044720":null},"xrefs":{"Monarch":{"xref_id":"0024623"}}}


id: GO:0110113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate, or extent of lipid transporter activity.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:27365390"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of lipid transporter activity (obsolete GO:0110113)","termid":"GO:0110113"}


id: GO:0097120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a receptor is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.","definition_xrefs":["PMID:21525273","GOC:sjp","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"receptor localization to synapse","synonyms":[{"name":"receptor localisation to synapse","type":"exact"}],"termid":"GO:0097120"}


id: PBO:0041438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 50","termid":"PBO:0041438"}


id: MONDO:0000701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the colon due to colonic ischemia resulting from alterations in systemic circulation or local vasculature.","definition_xrefs":["MESH:D017091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"ischemic colitis","secondary_identifiers":["DOID:0060181","SCTID:30588004","UMLS:C0162529","MEDGEN:57930"],"synonyms":[{"name":"colonic ischemia","type":"related"}],"termid":"MONDO:0000701","xrefs":{"Monarch":{"xref_id":"0000701"}}}


id: GO:1903658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type IV pilus biogenesis.","definition_xrefs":["PMID:25049409","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"regulation of type IV pilus biogenesis","termid":"GO:1903656"},{"relation_name":"positively_regulates","term_name":"type IV pilus assembly","termid":"GO:0043683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of type IV pilus biogenesis","synonyms":[{"name":"activation of TFP biogenesis","type":"narrow"},{"name":"activation of type 4 pilus biogenesis","type":"narrow"},{"name":"activation of type IV fimbria assembly","type":"narrow"},{"name":"activation of type IV fimbria biogenesis","type":"narrow"},{"name":"activation of type IV fimbriae assembly","type":"narrow"},{"name":"activation of type IV fimbriae biogenesis","type":"narrow"},{"name":"activation of type IV fimbrial assembly","type":"narrow"},{"name":"activation of type IV fimbrial biogenesis","type":"narrow"},{"name":"activation of type IV fimbrium assembly","type":"narrow"},{"name":"activation of type IV fimbrium biogenesis","type":"narrow"},{"name":"activation of type IV pilus biogenesis","type":"narrow"},{"name":"activation of type IV pilus biosynthesis","type":"narrow"},{"name":"positive regulation of TFP biogenesis","type":"exact"},{"name":"positive regulation of type 4 pilus biogenesis","type":"exact"},{"name":"positive regulation of type IV fimbria assembly","type":"exact"},{"name":"positive regulation of type IV fimbria biogenesis","type":"exact"},{"name":"positive regulation of type IV fimbriae assembly","type":"exact"},{"name":"positive regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"positive regulation of type IV fimbrial assembly","type":"exact"},{"name":"positive regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"positive regulation of type IV fimbrium assembly","type":"exact"},{"name":"positive regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"positive regulation of type IV pilus biosynthesis","type":"exact"},{"name":"up regulation of TFP biogenesis","type":"exact"},{"name":"up regulation of type 4 pilus biogenesis","type":"exact"},{"name":"up regulation of type IV fimbria assembly","type":"exact"},{"name":"up regulation of type IV fimbria biogenesis","type":"exact"},{"name":"up regulation of type IV fimbriae assembly","type":"exact"},{"name":"up regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"up regulation of type IV fimbrial assembly","type":"exact"},{"name":"up regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"up regulation of type IV fimbrium assembly","type":"exact"},{"name":"up regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"up regulation of type IV pilus biogenesis","type":"exact"},{"name":"up regulation of type IV pilus biosynthesis","type":"exact"},{"name":"up-regulation of TFP biogenesis","type":"exact"},{"name":"up-regulation of type 4 pilus biogenesis","type":"exact"},{"name":"up-regulation of type IV fimbria assembly","type":"exact"},{"name":"up-regulation of type IV fimbria biogenesis","type":"exact"},{"name":"up-regulation of type IV fimbriae assembly","type":"exact"},{"name":"up-regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"up-regulation of type IV fimbrial assembly","type":"exact"},{"name":"up-regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"up-regulation of type IV fimbrium assembly","type":"exact"},{"name":"up-regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"up-regulation of type IV pilus biogenesis","type":"exact"},{"name":"up-regulation of type IV pilus biosynthesis","type":"exact"},{"name":"upregulation of TFP biogenesis","type":"exact"},{"name":"upregulation of type 4 pilus biogenesis","type":"exact"},{"name":"upregulation of type IV fimbria assembly","type":"exact"},{"name":"upregulation of type IV fimbria biogenesis","type":"exact"},{"name":"upregulation of type IV fimbriae assembly","type":"exact"},{"name":"upregulation of type IV fimbriae biogenesis","type":"exact"},{"name":"upregulation of type IV fimbrial assembly","type":"exact"},{"name":"upregulation of type IV fimbrial biogenesis","type":"exact"},{"name":"upregulation of type IV fimbrium assembly","type":"exact"},{"name":"upregulation of type IV fimbrium biogenesis","type":"exact"},{"name":"upregulation of type IV pilus biogenesis","type":"exact"},{"name":"upregulation of type IV pilus biosynthesis","type":"exact"}],"termid":"GO:1903658"}


id: PR:Q9P7D8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7D8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized rhomboid protein P4H10.10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.10","synonyms":[{"name":"Spom972h-SPBP4H10.10","type":"exact"}],"termid":"PR:Q9P7D8"}


id: GO:1900383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic plasticity, the ability of synapses to change as circumstances require, via receptor localization to the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. Processes may include receptor transport to, and/or maintenance at, the synapse.","definition_xrefs":["GOC:kmv","PMID:22464329","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic plasticity by receptor localization to synapse","synonyms":[{"name":"regulation of synaptic plasticity by receptor localisation to synapse","type":"exact"}],"termid":"GO:1900383"}


id: PBO:0079662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 10","termid":"PBO:0079662"}


id: MONDO:0018020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mercury poisoning is caused mainly through ingestion or inhalation of any of the 3 forms of mercury, elemental, organic, and inorganic. Exposure to elemental mercury affects the pulmonary (inhalation of mercury vapors causes coughing, chills, fever, shortness of breath), dermatological (mild swelling, vesiculation, scaling, irritation, urticaria, erythema and allergic contact dermatitis accompanied by pain), and peripheral and central nervous (CNS) systems (depression, paranoia, extreme irritability, hallucinations, inability to concentrate, memory loss, hands, head, lips, tongue, jaw and eyelids tremors, weight loss, perpetually low body temperature, drowsiness, headaches, insomnia, fatigue). Exposure to inorganic mercury generally causes development of a metallic taste, local oropharyngeal pain, nausea, vomiting, bloody diarrhea, colic abdominal pain, renal dysfunction and, neurologic abnormalities; while that to organic mercury can lead to delayed neurotoxicity.","definition_xrefs":["Orphanet:330021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury poisoning","secondary_identifiers":["GARD:7021","SCTID:85180002","MESH:D008630","ICD9:985.0","EFO:1001810"],"synonyms":[{"name":"Mercury intoxication","type":"exact"},{"name":"Mercury toxicity","type":"related"},{"name":"hydrargyria","type":"exact"},{"name":"mercurialism","type":"exact"}],"termid":"MONDO:0018020","xrefs":{"Monarch":{"xref_id":"0018020"}}}


id: PBO:0030848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation","termid":"PBO:0030848"}


id: GO:0051987
data:
  {"annotated_genes":["SJAG_05290","SJAG_01837","SJAG_01805","SJAG_03048","SJAG_00082","SJAG_04280","SJAG_03126","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107120,113945,118011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[104299,91844,118684,95670,113183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chromosome segregation","termid":"GO:0051984"},{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"positively_regulates","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of attachment of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"stimulation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"up regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore","type":"exact"}],"termid":"GO:0051987","terms_by_termid":{"GO:0140429":null,"GO:1902425":null}}


id: GO:0110094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another using polyphosphate as the signal.","definition_xrefs":["PMID:28584190","GOC:rjd","PMID:27519410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"polyphosphate-mediated signaling","synonyms":[{"name":"polyphosphate signaling","type":"exact"}],"termid":"GO:0110094"}


id: PBO:0081516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 425","termid":"PBO:0081516"}


id: GO:1990264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any peptidyl-tyrosine dephosphorylation that is involved in inactivation of protein kinase activity.","definition_xrefs":["PMID:7501024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine dephosphorylation","termid":"GO:0035335"},{"relation_name":"part_of","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity","termid":"GO:1990264"}


id: MONDO:0024544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Heimler syndrome 1 (obsolete MONDO:0024544)","secondary_identifiers":["OMIM:234580","DOID:0080623"],"synonyms":[{"name":"HEIMLER syndrome 1","type":"related"},{"name":"HMLR1","type":"related"},{"name":"hearing loss, sensorineural, with enamel hypoplasia and nail defects","type":"related"},{"name":"peroxisome biogenesis disorder 1C","type":"related"}],"termid":"MONDO:0024544","xrefs":{"Monarch":{"xref_id":"0024544"}}}


id: PBO:0049710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 associated protein kinase","termid":"PBO:0049710"}


id: PBO:0044152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDNEP1 pseudogene 1","termid":"PBO:0044152"}


id: MONDO:0007307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sensorineural peripheral polyneuropathy affecting approximately 1 in 2,500 individuals, and is the most common inherited disorder of the peripheral nervous system. Autosomal dominant, autosomal recessive, and X-linked forms have been recognized.","definition_xrefs":["OMIM:118200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease dominant intermediate D","termid":"MONDO:0011909"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1B","secondary_identifiers":["MEDGEN:124377","Orphanet:101082","UMLS:C0270912","DOID:0110152","icd11.foundation:1632280319","NCIT:C118782","GARD:1246"],"synonyms":[{"name":"CMT 1B","type":"related"},{"name":"CMT1B","type":"exact"},{"name":"Charcot Marie Tooth disease type 1B","type":"related"},{"name":"Charcot-Marie-Tooth disease slow nerve conduction type linked to Duffy","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 1 caused by mutation in MPZ","type":"exact"},{"name":"Charcot-Marie-Tooth disease, autosomal dominant, with focally folded myelin sheaths, type 1B","type":"related"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1B","type":"related"},{"name":"Charcot-Marie-Tooth disease, slow nerve conduction type, linked to Duffy","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1B","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1B","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1B","type":"related"},{"name":"HMSN 1B","type":"related"},{"name":"HMSN IB","type":"exact"},{"name":"HMSN1","type":"related"},{"name":"HMSN1B","type":"exact"},{"name":"MPZ Charcot-Marie-Tooth disease type 1","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease with focally folded myelin sheaths type 1B","type":"exact"},{"name":"hereditary motor and sensory neuropathy 1","type":"related"},{"name":"hereditary motor and sensory neuropathy 1B","type":"related"},{"name":"hereditary motor and sensory neuropathy IB","type":"exact"}],"termid":"MONDO:0007307","xrefs":{"Monarch":{"xref_id":"0007307"}}}


id: GO:0043335
data:
  {"annotated_genes":["SJAG_02619","SJAG_02825","SJAG_04187","SJAG_02997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75094,76352,79928,80820],"is_not":false,"summary":null,"term":"GO:0043335"}]},"cv_name":"biological_process","definition":"The process of assisting in the disassembly of non-covalent linkages in a protein or protein aggregate, often where the proteins are in a non-functional or denatured state.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02619":null,"SJAG_02825":null,"SJAG_02997":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein unfolding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0043335","terms_by_termid":{"GO:0043335":null}}


id: PBO:0060658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural cytotoxicity triggering receptor 2","termid":"PBO:0060658"}


id: PBO:0066342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 4","termid":"PBO:0066342"}


id: MONDO:0022777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip palate dysmorphism kumar type","termid":"MONDO:0022777","xrefs":{"Monarch":{"xref_id":"0022777"}}}


id: FYPO:0001559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methionine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal methionine import","synonyms":[{"name":"normal L-methionine import","type":"exact"},{"name":"normal L-methionine import across plasma membrane","type":"exact"},{"name":"normal methionine import during mitotic cell cycle","type":"related"},{"name":"normal methionine import during vegetative growth","type":"exact"},{"name":"normal methionine import into cell","type":"exact"},{"name":"normal methionine uptake","type":"exact"}],"termid":"FYPO:0001559"}


id: PATO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along the antero-posterior axis.","definition_xrefs":["PATOC:JC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antero-posteriorly flattened","synonyms":[{"name":"antero-posteriorly compressed","type":"exact"}],"termid":"PATO:0002252"}


id: PBO:0043050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin like EF-hand protein 1","termid":"PBO:0043050"}


id: PBO:0061802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dense fiber of sperm tails 2 like","termid":"PBO:0061802"}


id: PBO:0044621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermcidin","termid":"PBO:0044621"}


id: PBO:0080628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 75","termid":"PBO:0080628"}


id: PBO:0065192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 4","termid":"PBO:0065192"}


id: SO:0001023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An allele is one of a set of coexisting sequence variants of a gene.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"variant_of","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele","secondary_identifiers":["http://en.wikipedia.org/wiki/Allele"],"synonyms":[{"name":"allelomorph","type":"exact"}],"termid":"SO:0001023"}


id: GO:0030797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 24-methylidenelophenol + S-adenosyl-L-methionine(1+) = (Z)-24-ethylidenelophenol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.143","RHEA:21044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"24-methylenesterol C-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05776","MetaCyc:2.1.1.143-RXN"],"synonyms":[{"name":"24-methylenelophenol C-24(1)-methyltransferase activity","type":"related"},{"name":"24-methylenelophenol C-241-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:24-methylenelophenol C-methyltransferase activity","type":"related"},{"name":"SMT(2) activity","type":"narrow"},{"name":"SMT2","type":"related"}],"termid":"GO:0030797"}


id: PBO:0017651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HbrB family protein involved in TOR signaling Bit2 (predicted)","termid":"PBO:0017651"}


id: GO:0006547
data:
  {"annotated_genes":["SJAG_03055","SJAG_03775","SJAG_02400","SJAG_00592","SJAG_01137","SJAG_00248","SJAG_01346","SJAG_04747"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72901,60403,80230,82119,78396,58061,77475,65352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00248":null,"SJAG_00592":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_02400":null,"SJAG_03055":null,"SJAG_03775":null,"SJAG_04747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-histidine metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null},"secondary_identifiers":["Wikipedia:Histidine"],"synonyms":[{"name":"histidine metabolic process","type":"broad"},{"name":"histidine metabolism","type":"exact"}],"termid":"GO:0006547","terms_by_termid":{"GO:0000105":null}}


id: PBO:0063191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 4","termid":"PBO:0063191"}


id: PBO:0110231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex WD repeat subunit Crb3","termid":"PBO:0110231"}


id: PBO:0029724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_cells_with_1C_DNA_content","termid":"PBO:0029724"}


id: GO:0038046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an enkephalin, and transmitting the signal across the membrane by activating an associated G-protein. A enkephalin is a pentapeptide (Tyr-Gly-Gly-Phe-Met or Tyr-Gly-Gly-Phe-Leu) involved in regulating nociception in the body.","definition_xrefs":["GOC:bf","Wikipedia:Enkephalin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled enkephalin receptor activity","synonyms":[{"name":"delta-opioid receptor activity","type":"related"},{"name":"enkephalin receptor activity","type":"broad"}],"termid":"GO:0038046"}


id: PBO:0053772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1017","termid":"PBO:0053772"}


id: GO:0140830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + L-glutamine(out) + Na+(out) = H+(out) + L-glutamine(in) + Na+(in).","definition_xrefs":["PMID:11742981","PMID:11850497","PMID:10619430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine transmembrane transporter activity","termid":"GO:0015186"},{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-glutamine, sodium:proton antiporter activity","secondary_identifiers":["RHEA:71127"],"termid":"GO:0140830"}


id: MONDO:0011022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Potocki-Shaffer syndrome is characterized by multiple exostoses, parietal foramina, enlargement of the anterior fontanelle and occasionally intellectual deficit and mild cranio-facial anomalies. To date, 23 individuals from 14 families have been reported. The syndrome is caused by contiguous gene deletions on the short arm of chromosome 11 (11p11.2).","definition_xrefs":["Orphanet:52022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 11","termid":"MONDO:0016893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potocki-Shaffer syndrome","secondary_identifiers":["DECIPHER:34","NCIT:C75456","GARD:9762","DOID:0111687","OMIM:601224","ICD9:758.39","icd11.foundation:1587521558","MESH:C538356","SCTID:702346005","MEDGEN:318657","UMLS:C1832588"],"synonyms":[{"name":"11p11.2 deletion","type":"exact"},{"name":"Defect11 syndrome","type":"related"},{"name":"PSS","type":"related"},{"name":"Potocki-Shaffer syndrome","type":"exact"},{"name":"chromosome 11P11.2 deletion syndrome","type":"related"},{"name":"deletion of chromosome 11p11.2","type":"related"},{"name":"proximal 11P deletion syndrome","type":"related"},{"name":"proximal 11p deletion syndrome","type":"exact"}],"termid":"MONDO:0011022","xrefs":{"Monarch":{"xref_id":"0011022"}}}


id: GO:0009808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lignins, a class of polymers of phenylpropanoid units.","definition_xrefs":["GOC:yl","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignin metabolic process","synonyms":[{"name":"lignin metabolism","type":"exact"}],"termid":"GO:0009808"}


id: PBO:0073532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 3, endophilin A3","termid":"PBO:0073532"}


id: GO:0018588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tri-n-butyltin + O2 + 2 H+ + 2 e- = H2O + beta-hydroxybutyldibutyltin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tri-n-butyltin dioxygenase activity (obsolete GO:0018588)","synonyms":[{"name":"TBT dioxygenase activity","type":"exact"}],"termid":"GO:0018588"}


id: MONDO:1010048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida occulta that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida, non-human animal","termid":"MONDO:1010047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida occulta, non-human animal","secondary_identifiers":["OMIA:000934"],"termid":"MONDO:1010048","xrefs":{"Monarch":{"xref_id":"1010048"}}}


id: MONDO:0021187
data:
  {"annotated_genes":["SJAG_04785","SJAG_02432","SJAG_01072"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88339,88340,88338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011369"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01072":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperlipidemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0020473","HP:0003077","SCTID:55822004","ICD9:272.4","ICD10CM:E78.5","MEDGEN:5692","MESH:D006949"],"synonyms":[{"name":"hyperlipemia","type":"related"},{"name":"hyperlipemias","type":"related"},{"name":"hyperlipidemia","type":"exact"},{"name":"hyperlipidemia (disease)","type":"exact"},{"name":"lipemia","type":"related"},{"name":"lipemias","type":"related"},{"name":"lipidemia","type":"related"},{"name":"lipidemias","type":"related"}],"termid":"MONDO:0021187","terms_by_termid":{"MONDO:0011369":null},"xrefs":{"Monarch":{"xref_id":"0021187"}}}


id: PBO:0041956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil and C2 domain containing 2B","termid":"PBO:0041956"}


id: PBO:0088085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX (ubiquitin regulatory X) domain-containing protein; interacts with Cdc48p, transcription is repressed when cells are grown in media containing inositol and choline; UBX6 has a paralog, UBX7, that arose from the whole genome duplication","termid":"PBO:0088085"}


id: MONDO:0001922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess that is located in the ureter.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureteral disorder","termid":"MONDO:0001926"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"},{"relation_name":"is_a","term_name":"urinary tract infection","termid":"MONDO:0100338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoureter","secondary_identifiers":["icd11.foundation:692694709","MEDGEN:19600","NCIT:C35666","UMLS:C0034223","ICD9:593.89","SCTID:85884009","DOID:1425"],"synonyms":[{"name":"ureter abscess","type":"exact"}],"termid":"MONDO:0001922","xrefs":{"Monarch":{"xref_id":"0001922"}}}


id: PBO:0076343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 10","termid":"PBO:0076343"}


id: MONDO:0019885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 11q is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome 11, with high phenotypic variability principally characterized by craniofacial dysmorphism (brachycephaly/plagiocephaly, low-set, posteriorly rotated ears, short philtrum, micrognathia) and intellectual disability. Short stature and seizures, as well as cardiac (e.g. atrial septal defect), skeletal (incl. brachy/syndactyly) and genital (e.g. micropenis, cryptorchidism) abnormalities may also be associated. Neurodevelopmental anomalies (pain insensitivity, sensorineural hearing loss, expressive language deficiency) and neuropsychiatric disorders (autistic features, auditory hallucination, self-talking) have also been reported.","definition_xrefs":["Orphanet:96103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 11q trisomy","termid":"MONDO:0022173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 11q","secondary_identifiers":["MESH:C538294","GARD:19318","SCTID:764447009","NORD:937","MEDGEN:419166","UMLS:C2931797"],"synonyms":[{"name":"Chromosome 11, Partial Trisomy 11q","type":"exact"},{"name":"distal duplication 11q","type":"exact"},{"name":"distal trisomy type 11q","type":"exact"},{"name":"telomeric duplication 11q","type":"exact"},{"name":"trisomy 11qter","type":"exact"}],"termid":"MONDO:0019885","xrefs":{"Monarch":{"xref_id":"0019885"}}}


id: PATO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resemblance to a cube (a 3-D shape with a square cross section).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"has_cross_section","term_name":"square","termid":"PATO:0000413"},{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cuboid","synonyms":[{"name":"block-like","type":"related"},{"name":"cuboidal","type":"exact"}],"termid":"PATO:0001872"}


id: PBO:0004344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol kinase Tor1","termid":"PBO:0004344"}


id: PBO:0088143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar serine-type carboxypeptidase; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of the autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; localizes to the vacuole lumen; expression induced by nitrogen limitation in a GLN3, GAT1-independent manner; N-glycosylated","termid":"PBO:0088143"}


id: PBO:0041342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 49","termid":"PBO:0041342"}


id: FYPO:0000100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chloramphenicol. Cells stop growing (and may die) at a concentration of chloramphenicol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to chloramphenicol","synonyms":[{"name":"hypersensitive to chloramphenicol","type":"exact"},{"name":"sensitive to chloramphenicol during mitotic cell cycle","type":"related"},{"name":"sensitive to chloramphenicol during vegetative growth","type":"exact"}],"termid":"FYPO:0000100"}


id: GO:0010059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that induces or promotes atrichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of atrichoblast fate specification","termid":"GO:0010058"},{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"positive regulation of plant epidermal cell differentiation","termid":"GO:1903890"},{"relation_name":"positively_regulates","term_name":"atrichoblast fate specification","termid":"GO:0010056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of atrichoblast fate specification","synonyms":[{"name":"activation of atrichoblast fate","type":"narrow"},{"name":"stimulation of atrichoblast fate","type":"narrow"},{"name":"up regulation of atrichoblast fate","type":"exact"},{"name":"up-regulation of atrichoblast fate","type":"exact"},{"name":"upregulation of atrichoblast fate","type":"exact"}],"termid":"GO:0010059"}


id: PBO:0051432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-13 (pseudogene)","termid":"PBO:0051432"}


id: PBO:0110419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCEAL9 pseudogene 1","termid":"PBO:0110419"}


id: GO:1905594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to resveratrol.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","PMID:18254726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"resveratrol binding","termid":"GO:1905594"}


id: PATO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological sex","termid":"PATO:0000047"}


id: MONDO:0018053
data:
  {"annotated_genes":["SJAG_01797","SJAG_03112","SJAG_01207","SJAG_00159","SJAG_01159","SJAG_03206","SJAG_00995","SJAG_01235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011125"},{"annotations":[87130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014615"},{"annotations":[87131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014619"},{"annotations":[87144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010495"},{"annotations":[87461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014841"},{"annotations":[88811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032806"},{"annotations":[87934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030517"},{"annotations":[87939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030518"}]},"cv_name":"mondo","definition":"Trichothiodystrophy or TTD is a heterogeneous group disorders characterized by short, brittle hair with low-sulphur content (due to an abnormal synthesis of the sulfur containing keratins).","definition_xrefs":["Orphanet:33364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00159":null,"SJAG_00995":null,"SJAG_01159":null,"SJAG_01207":null,"SJAG_01235":null,"SJAG_01797":null,"SJAG_03112":null,"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1366758649","GARD:12109","MEDGEN:363064","NORD:1292","DOID:0111866","MedDRA:10044628","SCTID:723551003","UMLS:C1955934","NANDO:1200627","NCIT:C4924","OMIMPS:601675"],"synonyms":[{"name":"trichothiodystrophy syndrome","type":"exact"}],"termid":"MONDO:0018053","terms_by_termid":{"MONDO:0010495":null,"MONDO:0011125":null,"MONDO:0014615":null,"MONDO:0014619":null,"MONDO:0014841":null,"MONDO:0030517":null,"MONDO:0030518":null,"MONDO:0032806":null},"xrefs":{"Monarch":{"xref_id":"0018053"}}}


id: PBO:0090763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Sco1","termid":"PBO:0090763"}


id: GO:0006311
data:
  {"annotated_genes":["SJAG_02460","SJAG_02267"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91136,102457],"is_not":false,"summary":null,"term":"GO:0006311"}]},"cv_name":"biological_process","definition":"The cell cycle process in which genetic information is transferred from one helix to another. It often occurs in association with general genetic recombination events, and is believed to be a straightforward consequence of the mechanisms of general recombination and DNA repair. For example, meiosis might yield three copies of the maternal version of an allele and only one copy of the paternal allele, indicating that one of the two copies of the paternal allele has been changed to a copy of the maternal allele.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02267":null,"SJAG_02460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"meiotic gene conversion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"gene conversion without reciprocal crossover","type":"exact"}],"termid":"GO:0006311","terms_by_termid":{"GO:0006311":null}}


id: PBO:0050881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopentenyl-diphosphate delta isomerase 2","termid":"PBO:0050881"}


id: GO:0047533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopentanoate + NADP+ + H2O = 2-oxoglutarate + NADPH + H+.","definition_xrefs":["EC:1.2.1.26","MetaCyc:25-DIOXOVALERATE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2,5-dioxovalerate dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:11296"],"synonyms":[{"name":"2,5-dioxopentanoate:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047533"}


id: PBO:0061283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 4","termid":"PBO:0061283"}


id: GO:0106247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of poly(A)-specific ribonuclease activity.","definition_xrefs":["GOC:mah","PMID:29932902"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of poly(A)-specific ribonuclease activity (obsolete GO:0106247)","termid":"GO:0106247"}


id: MONDO:0100031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adolescent/adult onset autosomal dominant epilepsy with auditory features (obsolete MONDO:0100031)","termid":"MONDO:0100031","xrefs":{"Monarch":{"xref_id":"0100031"}}}


id: GO:0007144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the first meiotic division occurs in the female germline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I","termid":"GO:0007127"},{"relation_name":"is_a","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"female meiosis I","synonyms":[{"name":"female meiosis I nuclear division","type":"exact"}],"termid":"GO:0007144"}


id: MONDO:0011331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital chylothorax is a rare, potentially life-threatening neonatal condition characterized by the accumulation of chyle within the pleural space leading to respiratory distress, malnutrition and immunological compromise, either immediately after birth or within the first few weeks of life. Congenital chylothorax is the most common cause of pleural effusion in neonates; it can occur primarily due to developmental anomalies of the lymphatic duct or can be associated with chromosomal anomalies (e.g. Noonan syndrome, Turner syndrome and Down syndrome), hydrops fetalis, mediastinal neuroblastoma and other congenital malformations.","definition_xrefs":["Orphanet:264688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleural disorder","termid":"MONDO:0002037"},{"relation_name":"is_a","term_name":"primary interstitial lung disease specific to childhood","termid":"MONDO:0017015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital chylothorax","secondary_identifiers":["ICD9:511.89","icd11.foundation:641475779","MESH:C535461","OMIM:603523","DOID:0060646","SCTID:233646003","MEDGEN:87398","UMLS:C0340014","GARD:10156"],"synonyms":[{"name":"chylothorax, congenital","type":"related"},{"name":"hydrothorax, congenital","type":"related"}],"termid":"MONDO:0011331","xrefs":{"Monarch":{"xref_id":"0011331"}}}


id: GO:0043915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-seryl-tRNA(Sec) = ADP + O-phospho-L-seryl-tRNA(Sec).","definition_xrefs":["GOC:jl","RHEA:25037","PMID:16201757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0016301","GO:0003824","GO:0140098","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"L-seryl-tRNA(Sec) kinase activity","secondary_identifiers":["EC:2.7.1.164","MetaCyc:RXN-10038"],"synonyms":[{"name":"O-phosphoseryl-tRNA(Sec) kinase activity","type":"exact"}],"termid":"GO:0043915"}


id: PBO:0065871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB27B, member RAS oncogene family","termid":"PBO:0065871"}


id: PR:Q9US34
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.07c gene.","definition_xrefs":["UniProtKB:Q9US34","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C1039.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.07c","synonyms":[{"name":"Spom972h-SPAC1039.07c","type":"exact"}],"termid":"PR:Q9US34"}


id: PBO:0005211
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIG4 syndrome","termid":"PBO:0005211"}


id: _global:related_via_localization_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds via some process of localization","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_localization_to","secondary_identifiers":["RO:0002337"],"termid":"_global:related_via_localization_to"}


id: PBO:0054143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1509","termid":"PBO:0054143"}


id: PBO:0046358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha","termid":"PBO:0046358"}


id: GO:1990704
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi trans membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi trans cisterna membrane (obsolete GO:1990704)","synonyms":[{"name":"integral component of trans-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990704"}


id: FYPO:0002719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell septum is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to septum","termid":"FYPO:0002718"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to septum","synonyms":[{"name":"decreased protein localisation to septum","type":"exact"},{"name":"decreased protein localization to cell septum","type":"exact"},{"name":"decreased protein localization to division septum","type":"exact"},{"name":"decreased protein localization to septum during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to septum during vegetative growth","type":"exact"},{"name":"reduced protein localization to septum","type":"exact"}],"termid":"FYPO:0002719"}


id: GO:0032074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of nuclease activity, the hydrolysis of ester linkages within nucleic acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclease activity","synonyms":[{"name":"down regulation of nuclease activity","type":"exact"},{"name":"down-regulation of nuclease activity","type":"exact"},{"name":"downregulation of nuclease activity","type":"exact"},{"name":"inhibition of nuclease activity","type":"narrow"},{"name":"nuclease inhibitor","type":"related"}],"termid":"GO:0032074"}


id: MONDO:1012157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, llama","secondary_identifiers":["OMIA:000631-9844"],"termid":"MONDO:1012157","xrefs":{"Monarch":{"xref_id":"1012157"}}}


id: FYPO:0008028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the rate of acid phosphatase activation during phosphate starvation is decreased.","definition_xrefs":["PMID:35012333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of acid phosphatase activation during phosphate starvation","synonyms":[{"name":"decreased acid phosphatase kinetics","type":"exact"}],"termid":"FYPO:0008028"}


id: PBO:0074345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4","termid":"PBO:0074345"}


id: FYPO:0008218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a mitotic S/G2 cell cycle phase transition normally.","definition_xrefs":["PMID:10947840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic S/G2 phase transition","termid":"FYPO:0008218"}


id: PBO:0085248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-tRNA hydrolase that releases stalled peptides from ribosomes, component of a Cdc48p-complex; involved in protein quality control; exhibits cytosolic and ER-membrane localization; contributes to ER-associated degradation (ERAD) of specific substrates at a step after their ubiquitination; translocates to mitochondria under oxidative stress and forms a complex with Cdc48p and Npl4p that is required for ubiquitin-mediated mitochondria-associated protein degradation (MAD)","termid":"PBO:0085248"}


id: SO:0001725
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 4th residue (a lysine), from the start of the H3 histone protein is di-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K4_methylation_site","termid":"SO:0001734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K4_dimethylation_site","synonyms":[{"name":"H3K4 di-methylation site","type":"exact"},{"name":"H3K4Me2","type":"related"}],"termid":"SO:0001725"}


id: MONDO:0004042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of the urethra in which the epithelial cells grow downward into the underlying supportive tissue.","definition_xrefs":["NCIT:C6173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral urothelial papilloma","termid":"MONDO:0002221"},{"relation_name":"is_a","term_name":"inverted urothelial papilloma","termid":"MONDO:0021109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethra inverted papilloma","secondary_identifiers":["MEDGEN:237034","UMLS:C1336887","DOID:6934"],"synonyms":[{"name":"inverted papilloma of the urethra","type":"exact"},{"name":"inverted papilloma of urethra","type":"exact"},{"name":"urethra inverted papilloma","type":"exact"},{"name":"urethral inverted papilloma","type":"exact"}],"termid":"MONDO:0004042","xrefs":{"Monarch":{"xref_id":"0004042"}}}


id: PBO:0116990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALM antisense RNA 1","termid":"PBO:0116990"}


id: GO:0043765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the repair of T/G mismatches arising from deamination of 5-methylcytosine in DNA by nicking double-stranded DNA within the sequence CT(AT)GN or NT(AT)GG next to the mismatched thymidine residue. The incision is mismatch-dependent and strand-specific, in favor of the G-containing strand. The incision serves as a starting point for subsequent excision repair by DNA polymerase I, which excises thymidine and reinserts cytidine.","definition_xrefs":["PMID:17651368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"T/G mismatch-specific endonuclease activity","synonyms":[{"name":"DNA mismatch endonuclease","type":"broad"},{"name":"V.EcoKDcm","type":"related"},{"name":"Vsr mismatch endonuclease","type":"related"},{"name":"very short patch repair protein","type":"related"}],"termid":"GO:0043765"}


id: PBO:0027874
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027874"}


id: MONDO:0020609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group, colton system (obsolete MONDO:0020609)","secondary_identifiers":["OMIM:110450"],"synonyms":[{"name":"BLOOD GROUP, COLTON SYSTEM","type":"related"},{"name":"CO","type":"related"},{"name":"Colton Blood Group System","type":"related"},{"name":"Colton-Null Phenotype","type":"related"},{"name":"aquaporin-1 deficiency","type":"exact"},{"name":"blood group, Colton","type":"exact"}],"termid":"MONDO:0020609","xrefs":{"Monarch":{"xref_id":"0020609"}}}


id: PBO:0070536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 2","termid":"PBO:0070536"}


id: GO:1904120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of otic vesicle morphogenesis.","definition_xrefs":["PMID:25677106","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"regulation of otic vesicle morphogenesis","termid":"GO:1904118"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of otic vesicle morphogenesis","synonyms":[{"name":"activation of otic vesicle morphogenesis","type":"narrow"},{"name":"up regulation of otic vesicle morphogenesis","type":"exact"},{"name":"up-regulation of otic vesicle morphogenesis","type":"exact"},{"name":"upregulation of otic vesicle morphogenesis","type":"exact"}],"termid":"GO:1904120"}


id: PBO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates sdh41","termid":"PBO:0001370"}


id: GO:0007425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an epithelial cell within an open tracheal system regardless of its environment; upon determination, the cell fate cannot be reversed. Tracheal cells are set aside as 10 clusters of approximately 80 cells on each side of the embryo (termed tracheal placodes). An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11063940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell fate determination, open tracheal system","secondary_identifiers":["GO:0046846"],"synonyms":[{"name":"tracheal cell fate determination","type":"broad"},{"name":"tracheal epithelial cell fate determination","type":"exact"},{"name":"tracheal placode cell fate determination","type":"related"}],"termid":"GO:0007425"}


id: GO:0044732
data:
  {"annotated_genes":["SJAG_03602","SJAG_05290","SJAG_00807","SJAG_02737","SJAG_03259","SJAG_02169","SJAG_04468","SJAG_00333","SJAG_03936","SJAG_04943","SJAG_04980","SJAG_01775","SJAG_03351","SJAG_00472","SJAG_02246","SJAG_01215","SJAG_03376","SJAG_04140","SJAG_01082","SJAG_03681","SJAG_07018","SJAG_02104","SJAG_02336","SJAG_00082","SJAG_02923","SJAG_02609","SJAG_05196","SJAG_03592","SJAG_03540","SJAG_00317","SJAG_01745","SJAG_03891","SJAG_02444","SJAG_02556","SJAG_02886","SJAG_02724","SJAG_05207","SJAG_03544","SJAG_00724","SJAG_04653","SJAG_01386","SJAG_02186","SJAG_01330","SJAG_03048","SJAG_04498","SJAG_01799","SJAG_02761","SJAG_03052","SJAG_02058","SJAG_05185","SJAG_00142","SJAG_00982","SJAG_00907","SJAG_01401","SJAG_01785","SJAG_01620","SJAG_00856","SJAG_04884","SJAG_01146","SJAG_05205","SJAG_02795","SJAG_01232","SJAG_01760","SJAG_00646","SJAG_03501","SJAG_00356","SJAG_05266","SJAG_04609","SJAG_02550","SJAG_00910","SJAG_03216","SJAG_05309","SJAG_01188","SJAG_02921","SJAG_05978","SJAG_01546","SJAG_03342","SJAG_02232","SJAG_00229","SJAG_03491","SJAG_04558","SJAG_04239","SJAG_02045","SJAG_03116","SJAG_02542","SJAG_05315","SJAG_03708","SJAG_04457","SJAG_03810","SJAG_03612","SJAG_00800","SJAG_02098","SJAG_02299","SJAG_02266","SJAG_01224","SJAG_03287","SJAG_04841","SJAG_01422","SJAG_05264","SJAG_03062","SJAG_00773","SJAG_03843","SJAG_02332","SJAG_04280","SJAG_02514","SJAG_03264","SJAG_04931","SJAG_04595","SJAG_01563","SJAG_01790","SJAG_01297","SJAG_00104","SJAG_03615","SJAG_01242","SJAG_04901","SJAG_06270","SJAG_03508","SJAG_04455","SJAG_03026","SJAG_04597","SJAG_03835","SJAG_01370","SJAG_03200","SJAG_04745","SJAG_04461","SJAG_00719","SJAG_02624","SJAG_01538","SJAG_01464","SJAG_04551","SJAG_03695","SJAG_01756","SJAG_00526","SJAG_02616","SJAG_01371","SJAG_00918","SJAG_01805","SJAG_00666"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66705,70178,72301,72503,76456,89222,90794,91083,91454,91488,91586,91832,91969,92566,92827,92837,93032,93187,93233,93610,94150,94385,94786,95119,95318,95597,95655,95739,95800,96090,96117,96265,96273,96646,98155,98207,98266,98276,98363,98605,98658,99166,99343,99696,99921,100319,100510,101500,101988,102042,102107,102280,102428,102444,102507,103181,103534,104056,104237,104968,105636,105740,105812,106507,107117,107420,108261,108302,108393,108577,108792,109455,110209,110296,110704,110719,110990,111523,111873,111931,112140,112148,112901,113031,113479,113661,114459,114754,114991,115655,116685,116799,116915,116952,117292,117901,118004,118516,118713,119026,119199,119211,119285,119305,120244,120788,121354,121356,121366],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[96858,99834,104918,107322,116992,118417],"is_not":true,"summary":null,"term":"GO:0044732"},{"annotations":[98752,101752,100164],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061493"},{"annotations":[118944,114827,112552,110809,111569,114625,117121],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061496"},{"annotations":[112553,102893,104727,113410,110810,111570],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061497"},{"annotations":[107293,101756,108332,109091,102852,104269,104733,113171,92988,112495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071958"},{"annotations":[112556,104736,112497,94701,110816,111575,104272,108333,113177,109492,114831,116493,97518,106979,101566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071957"},{"annotations":[110817,118949,109046],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061499"},{"annotations":[94702,117474],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160065"}]},"cv_name":"cellular_component","definition":"The microtubule organizing center that forms as part of the mitotic cell cycle; functionally homologous to the animal cell centrosome.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":138,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00093":null,"SJAG_00104":null,"SJAG_00142":null,"SJAG_00229":null,"SJAG_00317":null,"SJAG_00333":null,"SJAG_00356":null,"SJAG_00471":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00719":null,"SJAG_00724":null,"SJAG_00773":null,"SJAG_00800":null,"SJAG_00807":null,"SJAG_00856":null,"SJAG_00907":null,"SJAG_00910":null,"SJAG_00918":null,"SJAG_00982":null,"SJAG_01065":null,"SJAG_01082":null,"SJAG_01146":null,"SJAG_01188":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01232":null,"SJAG_01242":null,"SJAG_01293":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01386":null,"SJAG_01401":null,"SJAG_01422":null,"SJAG_01464":null,"SJAG_01538":null,"SJAG_01546":null,"SJAG_01563":null,"SJAG_01584":null,"SJAG_01620":null,"SJAG_01745":null,"SJAG_01756":null,"SJAG_01760":null,"SJAG_01775":null,"SJAG_01785":null,"SJAG_01790":null,"SJAG_01799":null,"SJAG_01805":null,"SJAG_02045":null,"SJAG_02058":null,"SJAG_02098":null,"SJAG_02104":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02232":null,"SJAG_02246":null,"SJAG_02266":null,"SJAG_02274":null,"SJAG_02299":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02444":null,"SJAG_02514":null,"SJAG_02542":null,"SJAG_02550":null,"SJAG_02556":null,"SJAG_02609":null,"SJAG_02616":null,"SJAG_02624":null,"SJAG_02724":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02795":null,"SJAG_02886":null,"SJAG_02921":null,"SJAG_02923":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03052":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03200":null,"SJAG_03216":null,"SJAG_03259":null,"SJAG_03264":null,"SJAG_03287":null,"SJAG_03342":null,"SJAG_03351":null,"SJAG_03376":null,"SJAG_03491":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03540":null,"SJAG_03544":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03612":null,"SJAG_03615":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03708":null,"SJAG_03810":null,"SJAG_03835":null,"SJAG_03843":null,"SJAG_03891":null,"SJAG_03936":null,"SJAG_04140":null,"SJAG_04239":null,"SJAG_04280":null,"SJAG_04455":null,"SJAG_04457":null,"SJAG_04461":null,"SJAG_04468":null,"SJAG_04498":null,"SJAG_04551":null,"SJAG_04558":null,"SJAG_04595":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04653":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_04901":null,"SJAG_04931":null,"SJAG_04943":null,"SJAG_04980":null,"SJAG_05185":null,"SJAG_05196":null,"SJAG_05205":null,"SJAG_05207":null,"SJAG_05264":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05309":null,"SJAG_05315":null,"SJAG_05978":null,"SJAG_06270":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005575","GO:0005816","GO:0015630"],"is_obsolete":false,"name":"mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:32243490":null},"termid":"GO:0044732","terms_by_termid":{"GO:0044732":null,"GO:0061493":null,"GO:0061496":null,"GO:0061497":null,"GO:0061499":null,"GO:0071957":null,"GO:0071958":null,"GO:0160065":null}}


id: GO:0034735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that forms part of the TFIIIC complex, observed in human; composed of five subunits (GTF3C1/hTFIIIC220/TFIIICalpha, GTF3C2/hTFIIIC110/TFIIICbeta, GTF3C3/hTFIIIC102/TFIIICgamma, GTF3C4/hTFIIIC90/TFIIICdelta and GTF3C5/hTFIIIC63/TFIIICepsilon in human) that together recognize the type 2 RNA polymerase III promoter.","definition_xrefs":["GOC:mah","PMID:11433012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"},{"relation_name":"part_of","term_name":"transcription factor TFIIIC complex","termid":"GO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transcription factor TFIIIC2 complex","termid":"GO:0034735"}


id: PBO:0070543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 9","termid":"PBO:0070543"}


id: GO:0034864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpentanal + H2O = 2,4,4-trimethylpentanoate + 3 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpentanal dehydrogenase activity (obsolete GO:0034864)","termid":"GO:0034864"}


id: PR:Q9UT97
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11599:SF14","PRO:DNx","OMA:SCHPO01621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.02c","secondary_identifiers":["UniProtKB:Q9UT97"],"synonyms":[{"name":"Spom972h-PSMA5","type":"exact"}],"termid":"PR:Q9UT97"}


id: PBO:0050983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 52","termid":"PBO:0050983"}


id: GO:0141168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic cytosine DNA demethylation pathway that includes a deamination step to produce either a thymine (T), or a 5-hydroxymethyluracil (5hmU), if the 5meC had first been converted to 5hmC. A DNA glycosylase (e. g. TDG) recognizes the T mispaired with a G or the 5hmC and excises the modified base to initiate its replacement with unmethylated cytosine through base excision repair.","definition_xrefs":["PMID:29875631","PMID:36478523","PMID:21862972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"},{"relation_name":"is_a","term_name":"chromosomal 5-methylcytosine DNA demethylation pathway","termid":"GO:0141166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"chromosomal 5-methylcytosine DNA demethylation, oxidative deamination pathway","synonyms":[{"name":"epigenetic 5-methylcytosine DNA demethylation, oxidative deamination pathway","type":"related"},{"name":"epigenetic DNA demethylation, oxidative deamination pathway","type":"related"}],"termid":"GO:0141168"}


id: PBO:0017631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase activator Whi2","termid":"PBO:0017631"}


id: GO:0060424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the foregut into the area in which the lung will develop.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"is_a","term_name":"foregut regionalization","termid":"GO:0060423"},{"relation_name":"part_of","term_name":"primary lung bud formation","termid":"GO:0060431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung field specification","synonyms":[{"name":"lung specification","type":"exact"}],"termid":"GO:0060424"}


id: PBO:0063115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase 1 pseudogene 2","termid":"PBO:0063115"}


id: MONDO:0020130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation of the cerebellar vermis (obsolete MONDO:0020130)","secondary_identifiers":["Orphanet:98514"],"termid":"MONDO:0020130","xrefs":{"Monarch":{"xref_id":"0020130"}}}


id: GO:0052691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-beta-L-arabinofuranose = UDP-beta-L-arabinopyranose.","definition_xrefs":["EC:5.4.99.30","RHEA:28350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"UDP-arabinopyranose mutase activity","secondary_identifiers":["MetaCyc:RXN-11552"],"synonyms":[{"name":"UDP-L-Ara mutase activity","type":"related"},{"name":"UDP-L-arabinopyranose furanomutase activity","type":"related"},{"name":"UDP-L-arabinose mutase activity","type":"related"},{"name":"UDP-arabinopyranose pyranomutase activity","type":"exact"},{"name":"uridine-diphosphate-L-arabinose mutase activity","type":"related"}],"termid":"GO:0052691"}


id: PBO:0087590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; mutation is functionally complemented by human ARPC4","termid":"PBO:0087590"}


id: GO:1902752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of renal amino acid absorption.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:1526373","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal amino acid absorption","termid":"GO:1990297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of renal amino acid absorption","termid":"GO:1902752"}


id: PBO:0036357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3, Coa3 (predicted)","termid":"PBO:0036357"}


id: PomGeneEx:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present at the same level under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constant","termid":"PomGeneEx:0000007"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level constant","synonyms":[{"name":"constant protein level","type":"exact"},{"name":"protein expression constant","type":"exact"}],"termid":"PomGeneEx:0000023"}


id: PBO:0065905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabaptin, RAB GTPase binding effector protein 1","termid":"PBO:0065905"}


id: PBO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helix-hairpin-helix","termid":"PBO:0001320"}


id: PR:O74399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein BOP1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR17605:SF0","OMA:SCHPO03387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein erb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.13c","secondary_identifiers":["UniProtKB:O74399"],"synonyms":[{"name":"Spom972h-BOP1","type":"exact"},{"name":"eukaryotic ribosome biogenesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74399"}


id: PBO:0076009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1","termid":"PBO:0076009"}


id: GO:1904713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-catenin destruction complex.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:22899650","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"beta-catenin destruction complex binding","synonyms":[{"name":"23S APC complex binding","type":"narrow"},{"name":"APC-Axin-1-beta-catenin complex binding","type":"exact"},{"name":"Axin-APC-beta-catenin-GSK3B complex binding","type":"exact"},{"name":"BDC binding","type":"exact"},{"name":"beta-catenin degradation complex binding","type":"exact"}],"termid":"GO:1904713"}


id: MONDO:0004506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm that arises in a terminal ductal lobular unit. It is characterized by the presence of a fibrovascular core that is lined by benign epithelial and myoepithelial proliferations. Peripheral breast papillomas are often multiple and are usually found microscopically. Patients are often asymptomatic.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal breast papilloma","termid":"MONDO:0021097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microscopic breast papilloma","secondary_identifiers":["DOID:8225","MEDGEN:233851","NCIT:C36088","UMLS:C1335390"],"synonyms":[{"name":"microscopic breast papilloma","type":"exact"},{"name":"peripheral breast papilloma","type":"exact"}],"termid":"MONDO:0004506","xrefs":{"Monarch":{"xref_id":"0004506"}}}


id: MONDO:0016113
data:
  {"annotated_genes":["SJAG_03328","SJAG_04907","SJAG_00754","SJAG_04084","SJAG_04321","SJAG_01260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[88438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010190"},{"annotations":[88905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012890"},{"annotations":[88909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012891"},{"annotations":[88734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[87926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014874"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04084":null,"SJAG_04321":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"bulbospinal muscular atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:230253001","UMLS:C0393547","NANDO:1200001","MEDGEN:95977","Orphanet:206701","GARD:20365","icd11.foundation:1604214898"],"synonyms":[{"name":"SBMA","type":"exact"},{"name":"bulbospinal muscular atrophy","type":"exact"},{"name":"spinal and bulbal muscular atrophy","type":"exact"},{"name":"spinal-bulbar muscular atrophy","type":"exact"}],"termid":"MONDO:0016113","terms_by_termid":{"MONDO:0010190":null,"MONDO:0012890":null,"MONDO:0012891":null,"MONDO:0013853":null,"MONDO:0014485":null,"MONDO:0014874":null},"xrefs":{"Monarch":{"xref_id":"0016113"}}}


id: PBO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine kinase Mak2","termid":"PBO:0002325"}


id: GO:0070589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a macromolecule that is destined to form part of a specific cellular component.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular component macromolecule biosynthetic process (obsolete GO:0070589)","synonyms":[{"name":"cellular component macromolecule biosynthesis","type":"exact"}],"termid":"GO:0070589"}


id: PBO:0028055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_subtelomere","termid":"PBO:0028055"}


id: FYPO:0000924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of anisomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to anisomycin","synonyms":[{"name":"resistance to anisomycin during mitotic cell cycle","type":"related"},{"name":"resistance to anisomycin during vegetative growth","type":"exact"},{"name":"resistant to anisomycin","type":"exact"}],"termid":"FYPO:0000924"}


id: GO:0005297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: proline(out) + H+(out) = proline(in) + H+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:proton symporter activity","termid":"GO:0005280"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"proline:proton symporter activity","synonyms":[{"name":"hydrogen/proline transporter","type":"broad"}],"termid":"GO:0005297"}


id: FYPO:0004684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is elongated, and has two nuclei but no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002024"},{"relation_name":"is_a","term_name":"binucleate aseptate vegetative cell","termid":"FYPO:0004562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0000032","FYPO:0005447","FYPO:0000004"],"is_obsolete":false,"name":"inviable elongated binucleate aseptate cell","synonyms":[{"name":"inviable elongated binucleate aseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated binucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable elongated binucleate aseptate vegetative cell","type":"exact"},{"name":"lethal; elongated binucleate aseptate cell","type":"exact"}],"termid":"FYPO:0004684"}


id: PBO:0046970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member G","termid":"PBO:0046970"}


id: PBO:0068683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 64, pseudogene","termid":"PBO:0068683"}


id: GO:0050256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribitol 5-phosphate + NAD(P)+ = D-ribulose 5-phosphate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ribitol-5-phosphate 2-dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:RIBITOL-5-PHOSPHATE-2-DEHYDROGENASE-RXN"],"synonyms":[{"name":"D-ribitol-5-phosphate:NAD(P)+ 2-oxidoreductase activity","type":"related"},{"name":"dehydrogenase, ribitol 5-phosphate","type":"related"}],"termid":"GO:0050256"}


id: FYPO:0006749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transfer RNA precursor(s) (pre-tRNA) measured in a cell is higher than normal. Total pre-tRNA or a specific pre-tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased pre-tRNA level during vegetative growth","synonyms":[{"name":"increased pre-tRNA accumulation during vegetative growth","type":"related"},{"name":"increased pre-tRNA level during mitotic cell cycle","type":"related"},{"name":"increased pre-tRNA transcript level during vegetative growth","type":"exact"},{"name":"increased tRNA level during vegetative growth","type":"broad"},{"name":"increased tRNA primary transcript level during vegetative growth","type":"exact"},{"name":"increased transfer RNA precursor level during vegetative growth","type":"exact"}],"termid":"FYPO:0006749"}


id: GO:0035382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a sterol is transported across a membrane. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"sterol transmembrane transport","synonyms":[{"name":"sterol membrane transport","type":"exact"}],"termid":"GO:0035382"}


id: MOD:00962
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that by reducing the indole ring system of tryptophan to indoline effectively converts an L-tryptophan residue to 2',3'-dihydrotryptophan.","definition_xrefs":["URL:http://dx.doi.org/10.1016/S0040-4039(00)99113-5","DeltaMass:343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"hydrogenated residue","termid":"MOD:01473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2',3'-dihydrotryptophan","termid":"MOD:00962"}


id: GO:0016138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoside biosynthetic process","secondary_identifiers":["GO:0016141"],"synonyms":[{"name":"O-glycoside anabolism","type":"exact"},{"name":"O-glycoside biosynthesis","type":"exact"},{"name":"O-glycoside biosynthetic process","type":"exact"},{"name":"O-glycoside formation","type":"exact"},{"name":"O-glycoside synthesis","type":"exact"},{"name":"glycoside anabolism","type":"exact"},{"name":"glycoside biosynthesis","type":"exact"},{"name":"glycoside formation","type":"exact"},{"name":"glycoside synthesis","type":"exact"}],"termid":"GO:0016138"}


id: PBO:0049412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2C","termid":"PBO:0049412"}


id: PBO:0057284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 504","termid":"PBO:0057284"}


id: GO:0075316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of basidium development, a process that leads to the formation of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to basidiomycetes and distinguishes them from other kinds of fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of basidium development","termid":"GO:0075314"},{"relation_name":"negatively_regulates","term_name":"basidium development","termid":"GO:0075313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of basidium development","termid":"GO:0075316"}


id: PBO:0047629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"firre intergenic repeating RNA element","termid":"PBO:0047629"}


id: GO:2000414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibronectin-dependent thymocyte migration.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of thymocyte migration","termid":"GO:2000411"},{"relation_name":"is_a","term_name":"regulation of fibronectin-dependent thymocyte migration","termid":"GO:2000413"},{"relation_name":"negatively_regulates","term_name":"fibronectin-dependent thymocyte migration","termid":"GO:0072681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibronectin-dependent thymocyte migration","synonyms":[{"name":"negative regulation of fibronectin-dependent immature T cell migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T-cell migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"negative regulation of fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000414"}


id: MONDO:0009125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dopamine beta-hydroxylase, plasma, thermolability of (obsolete MONDO:0009125)","secondary_identifiers":["OMIM:223380"],"synonyms":[{"name":"dopamine beta-hydroxylase, plasma, thermolability of","type":"exact"}],"termid":"MONDO:0009125","xrefs":{"Monarch":{"xref_id":"0009125"}}}


id: PBO:0004096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm1","termid":"PBO:0004096"}


id: GO:0031682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G-protein gamma subunit.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"G-protein gamma-subunit binding","synonyms":[{"name":"G-gamma protein subunit binding","type":"exact"}],"termid":"GO:0031682"}


id: GO:0006921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The breakdown of structures such as organelles, proteins, or other macromolecular structures during apoptosis.","definition_xrefs":["GOC:mah","GOC:dph","GOC:mtg_apoptosis","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"part_of","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular component disassembly involved in execution phase of apoptosis","synonyms":[{"name":"cellular component disassembly involved in apoptosis","type":"narrow"},{"name":"cellular component disassembly involved in apoptotic process","type":"broad"},{"name":"disassembly of cell structures","type":"broad"}],"termid":"GO:0006921"}


id: FYPO:0005633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which sister kinetochores separate during the first meiotic nuclear division, homologous chromosomes undergo normal reductional division, but sister chromatids divide unequally in meiosis II. Normally sister kinetochores remain together until meiosis II.  Normally sister kinetochores remain together until meiosis II.","definition_xrefs":["PMID:21920317","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid nondisjunction at meiosis II","termid":"FYPO:0003182"},{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I","termid":"FYPO:0005648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"sister kinetochore dissociation in meiotic metaphase I, normal chromosome segregation in meiosis I, and sister chromatid non-disjunction in meiosis II","synonyms":[{"name":"abnormal chromosome segregation during first meiotic nuclear division with premature sister kinetochore separation, reductional chromosome separation, and unequal sister chromatid division","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, reductional chromosome separation, and unequal sister chromatid division","type":"exact"},{"name":"precocious centromeric dissociation during meiosis I and normal chromosome division in meiosis I, and unequal sister chromatid segregation in meiosis II","type":"exact"},{"name":"premature sister kinetochore separation and normal chromosome disjunction in meiosis I, and unequal sister chromatid disjunction in meiosis II","type":"exact"}],"termid":"FYPO:0005633"}


id: GO:0018672
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthranilate + 2 H+ + NADPH + O2 = 2,3-dihydroxybenzoate + NADP+ + NH4.","definition_xrefs":["EC:1.14.13.35","RHEA:21236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"anthranilate 3-monooxygenase (deaminating) activity","secondary_identifiers":["UM-BBD_reactionID:r0578","MetaCyc:1.14.13.35-RXN","KEGG_REACTION:R00980"],"synonyms":[{"name":"anthranilate 2,3-dioxygenase (deaminating)","type":"related"},{"name":"anthranilate 2,3-hydroxylase (deaminating) activity","type":"related"},{"name":"anthranilate hydroxylase (deaminating) activity","type":"exact"},{"name":"anthranilate hydroxylase activity","type":"broad"},{"name":"anthranilate,NADPH:oxygen oxidoreductase (3-hydroxylating, deaminating)","type":"related"}],"termid":"GO:0018672"}


id: MONDO:1010838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Galactosialidosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosialidosis, non-human animal","termid":"MONDO:1010166"},{"relation_name":"is_a","term_name":"lysosomal storage disease, dog","termid":"MONDO:1010860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosialidosis, dog","secondary_identifiers":["OMIA:000400-9615"],"termid":"MONDO:1010838","xrefs":{"Monarch":{"xref_id":"1010838"}}}


id: MONDO:0008998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cockayne syndrome type III, also known as the mild form of Cockayne syndrome, is a rare genetic disorder that causes early (premature) aging. Unlike the more severe forms of this condition, individuals with Cockayne syndrome type III can have normal growth and development. Symptoms may include sunlight sensitivity (photosensitivity), hearing loss, eye and bone abnormalities, and changes to the brain that can be seen on imaging (brain MRIs). In general, symptoms of Cockayne syndrome type III are usually not noticeable until later in childhood.","direct_ancestors":[{"relation_name":"is_a","term_name":"Cockayne syndrome","termid":"MONDO:0016006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005066","MONDO:0006025","MONDO:0021190"],"is_obsolete":false,"name":"Cockayne syndrome type 3","secondary_identifiers":["MEDGEN:196713","Orphanet:90324","UMLS:C0751037","OMIM:216411","GARD:1417","icd11.foundation:1401163130"],"synonyms":[{"name":"Cockayne syndrome type 3","type":"exact"},{"name":"Cockayne syndrome type C","type":"related"},{"name":"Cockayne syndrome type III","type":"exact"},{"name":"Cockayne syndrome, type III","type":"related"}],"termid":"MONDO:0008998","xrefs":{"Monarch":{"xref_id":"0008998"}}}


id: PBO:0050923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3P pseudogene 6","termid":"PBO:0050923"}


id: PBO:0028455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_re-entry_into_mitotic_cell_cycle_during_recovery_from_stationary_phase","termid":"PBO:0028455"}


id: PBO:0055435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2865","termid":"PBO:0055435"}


id: PBO:0038422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-2-macroglobulin","termid":"PBO:0038422"}


id: MONDO:1012314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital erythropoietic porphyria, non-human animal","termid":"MONDO:1011742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital erythropoietic porphyria, cattle","secondary_identifiers":["OMIA:001175-9913"],"termid":"MONDO:1012314","xrefs":{"Monarch":{"xref_id":"1012314"}}}


id: GO:0000221
data:
  {"annotated_genes":["SJAG_00212","SJAG_01471","SJAG_04015","SJAG_01397","SJAG_04955","SJAG_00136","SJAG_01447","SJAG_01817"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61019,72976,89865,98504,100810,104588,111842,120757],"is_not":false,"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"The V1 domain of a proton-transporting V-type ATPase found in the vacuolar membrane.","definition_xrefs":["GOC:mah","PMID:16449553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase, V1 domain","termid":"GO:0033180"},{"relation_name":"part_of","term_name":"vacuolar proton-transporting V-type ATPase complex","termid":"GO:0016471"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773","GO:0032991"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase, V1 domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar hydrogen ion-transporting ATPase V1 domain","type":"exact"}],"termid":"GO:0000221","terms_by_termid":{"GO:0000221":null}}


id: SO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region located within an inversion site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site_specific_recombination_target_region","termid":"SO:0000342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_site_part","synonyms":[{"name":"inversion site part","type":"exact"}],"termid":"SO:0001048"}


id: PBO:0079685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitination factor E4B","termid":"PBO:0079685"}


id: PBO:0073428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a subunit 3","termid":"PBO:0073428"}


id: GO:0046007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"regulation of activated T cell proliferation","termid":"GO:0046006"},{"relation_name":"negatively_regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of activated T cell proliferation","synonyms":[{"name":"down regulation of activated T cell proliferation","type":"exact"},{"name":"down-regulation of activated T cell proliferation","type":"exact"},{"name":"downregulation of activated T cell proliferation","type":"exact"},{"name":"inhibition of activated T cell proliferation","type":"narrow"},{"name":"negative regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of activated T-cell proliferation","type":"exact"},{"name":"negative regulation of activated T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046007"}


id: PBO:0084424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major mitochondrial D-lactate dehydrogenase; oxidizes D-lactate to pyruvate, transcription is heme-dependent, repressed by glucose, and derepressed in ethanol or lactate; located in the mitochondrial inner membrane","termid":"PBO:0084424"}


id: PBO:0077570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 276","termid":"PBO:0077570"}


id: FYPO:0005961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a meiotic spindle forms with microtubules emanating from three or more poles.","definition_xrefs":["PMID:15992541","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"multipolar spindle","termid":"FYPO:0005959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000120","FYPO:0002399","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"multipolar meiotic spindle","synonyms":[{"name":"multipolar meiotic spindles","type":"exact"},{"name":"multipolar spindle during meiosis","type":"exact"}],"termid":"FYPO:0005961"}


id: GO:0004798
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72797],"is_not":false,"summary":null,"term":"GO:0004798"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dTMP + ATP = dTDP + ADP.","definition_xrefs":["RHEA:13517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside phosphate kinase activity, ATP as phosphate donor","termid":"GO:0047507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"dTMP kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DTMPKI-RXN","EC:2.7.4.9"],"synonyms":[{"name":"ATP:dTMP phosphotransferase activity","type":"related"},{"name":"TMPK activity","type":"related"},{"name":"deoxythymidine 5'-monophosphate kinase activity","type":"related"},{"name":"thymidine 5'-monophosphate kinase activity","type":"related"},{"name":"thymidine monophosphate kinase activity","type":"related"},{"name":"thymidylate kinase activity","type":"exact"},{"name":"thymidylate monophosphate kinase activity","type":"related"},{"name":"thymidylic acid kinase activity","type":"related"},{"name":"thymidylic kinase activity","type":"related"}],"termid":"GO:0004798","terms_by_termid":{"GO:0004798":null}}


id: GO:0072017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the distal tubule over time, from its formation to the mature structure. In mammals, the distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tubule development","termid":"GO:0072017"}


id: PBO:0079554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 7","termid":"PBO:0079554"}


id: SO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An SNV that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"substitution_artifact","termid":"SO:0002176"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNV_artifact","synonyms":[{"name":"SNV artifact","type":"exact"}],"termid":"SO:0002178"}


id: PBO:0078143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 22","termid":"PBO:0078143"}


id: GO:0018964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propylene, an alkene produced by catalytic or thermal cracking of hydrocarbons or as a by-product of petroleum refining. It is used mainly in the preparation of alkylates for gasoline and in the production of polypropylene, acrylonitrile, propylene oxide and a number of other industrial chemicals.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"propylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:pro"],"synonyms":[{"name":"propylene metabolism","type":"exact"}],"termid":"GO:0018964"}


id: PBO:0043008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase domain containing 1","termid":"PBO:0043008"}


id: GO:0051439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of ubiquitin ligase activity that contributes to the mitotic cell cycle.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle (obsolete GO:0051439)","synonyms":[{"name":"mitotic APC regulator","type":"narrow"},{"name":"mitotic SCF complex regulator","type":"narrow"},{"name":"mitotic anaphase-promoting complex regulator","type":"narrow"},{"name":"mitotic ubiquitin ligase regulator","type":"related"},{"name":"mitotic ubiquitin-protein ligase regulator","type":"related"},{"name":"regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"regulation of ubiquitin-protein ligase activity during mitotic cell cycle","type":"related"}],"termid":"GO:0051439"}


id: GO:0042329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a collagen and cuticulin-based cuticle. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cuticle","termid":"GO:0042302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of collagen and cuticulin-based cuticle","synonyms":[{"name":"structural constituent of cuticle","type":"broad"}],"termid":"GO:0042329"}


id: PBO:0004137
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae PRP6","termid":"PBO:0004137"}


id: GO:0150136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-37 production.","definition_xrefs":["GOC:aruk","PMID:30362558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-37 production","termid":"GO:0150137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-37 production","synonyms":[{"name":"regulation of interleukin-37 biosynthetic process","type":"narrow"}],"termid":"GO:0150136"}


id: MONDO:0000595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of psychiatric disorders characterized by a disturbance in sexual desire and in the psychophysiological changes that make up the sexual response cycle.","definition_xrefs":["NCIT:C92202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual disorder","secondary_identifiers":["DOID:0060043","UMLS:C0236989","SCTID:231532002","MEDGEN:452303"],"synonyms":[{"name":"sexual disorder","type":"exact"}],"termid":"MONDO:0000595","xrefs":{"Monarch":{"xref_id":"0000595"}}}


id: GO:0051298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"centrosome duplication","synonyms":[{"name":"centrosome replication","type":"exact"}],"termid":"GO:0051298"}


id: PBO:0087060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L2A; homologous to mammalian ribosomal protein L2 and bacterial L2; RPL2A has a paralog, RPL2B, that arose from the whole genome duplication","termid":"PBO:0087060"}


id: PBO:0087331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin family member; required for the cytoplasm-to-vacuole targeting (Cvt) pathway, endosomal sorting and selective autophagy; has a Phox homology domain that binds phosphatidylinositol-3-phosphate; interacts with Snx4p; potential Cdc28p substrate","termid":"PBO:0087331"}


id: GO:0007365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that divides the spatial regions of an embryo into serially repeated regions.","definition_xrefs":["GOC:dph","GOC:ma","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periodic partitioning","termid":"GO:0007365"}


id: MONDO:0020195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete excretory apparatus of the lacrimal system anomaly (obsolete MONDO:0020195)","secondary_identifiers":["Orphanet:98605"],"termid":"MONDO:0020195","xrefs":{"Monarch":{"xref_id":"0020195"}}}


id: MONDO:1011047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome, non-human animal","termid":"MONDO:1010261"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrotic syndrome, dog","secondary_identifiers":["OMIA:000712-9615"],"termid":"MONDO:1011047","xrefs":{"Monarch":{"xref_id":"1011047"}}}


id: PBO:0076119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 3","termid":"PBO:0076119"}


id: PBO:0064652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA2 antisense RNA 1","termid":"PBO:0064652"}


id: GO:1990203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing two transmembrane subunits; a MdtB dimer and one unit of MdtC. Capable of exporting substrates across the cell membrane. Involved in conferring antibiotic resistance of Gram-negative bacteria by transporting drugs across the membrane.","definition_xrefs":["GOC:bhm","PMID:20038594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MdtBC Complex","synonyms":[{"name":"multidrug efflux pump MdtBC","type":"exact"}],"termid":"GO:1990203"}


id: PBO:0031293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_cell_cycle_checkpoint_phenotype","termid":"PBO:0031293"}


id: GO:0047801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + 2-oxoglutarate = mercaptopyruvate + L-glutamate.","definition_xrefs":["RHEA:17441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"L-cysteine transaminase activity","secondary_identifiers":["MetaCyc:CYSTEINE-AMINOTRANSFERASE-RXN","Reactome:R-HSA-9012597","EC:2.6.1.3"],"synonyms":[{"name":"L-cysteine:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"cysteine aminotransferase activity","type":"broad"},{"name":"cysteine transaminase activity","type":"exact"}],"termid":"GO:0047801"}


id: PR:O94328
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nbl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 118 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.12","synonyms":[{"name":"Spom972h-nbl1","type":"exact"}],"termid":"PR:O94328"}


id: MONDO:0015204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microlissencephaly describes a heterogenous group of a rare cortical malformations characterized by lissencephaly in combination with severe congenital microcephaly, presenting with spasticity, severe developmental delay, and seizures and with survival varying from days to years.","definition_xrefs":["Orphanet:1083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"microlissencephaly","secondary_identifiers":["DOID:0112234","icd11.foundation:169315445","GARD:16555","MEDGEN:365439","UMLS:C1956147"],"termid":"MONDO:0015204","xrefs":{"Monarch":{"xref_id":"0015204"}}}


id: PBO:0114135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulphite transmembrane transporter Ssu2","termid":"PBO:0114135"}


id: PBO:0040818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICRA like chromatin remodeling complex associated protein","termid":"PBO:0040818"}


id: PBO:0070735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 5","termid":"PBO:0070735"}


id: PBO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pole target of Calmodulin in Pombe","termid":"PBO:0001969"}


id: GO:0031060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of methyl groups to histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone methylation (obsolete GO:0031060)","termid":"GO:0031060"}


id: PBO:0047213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM222A antisense RNA 1","termid":"PBO:0047213"}


id: FYPO:0002349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly begins later than normal.","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly during vegetative growth","termid":"FYPO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of stress granule assembly during vegetative growth","synonyms":[{"name":"delayed onset of cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"delayed onset of stress granule assembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of stress granule formation during vegetative growth","type":"exact"},{"name":"delayed stress granule assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002349"}


id: PBO:0040093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase L pseudogene 1","termid":"PBO:0040093"}


id: PBO:0085750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; implicated in Slt2p mitogen-activated (MAP) kinase signaling pathway; interacts with numerous components in the mating pheromone and CWI MAPK pathways; associates with Rlm1p; KDX1 has a paralog, SLT2, that arose from the whole genome duplication","termid":"PBO:0085750"}


id: MONDO:0034678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare non-syndromic limb malformation characterized by a hand or foot with more than five digits that has a recognizable anterior/posterior axis of symmetry, either with a hallux- or thumb-like structure or an interdigital space in the middle. The most lateral digits on each side typically resemble fifth fingers or toes. The malformation may be unilateral or bilateral and may occur in isolation or in association with other congenital anomalies. [Orphanet:498494]","definition_xrefs":["Orphanet:498494"],"gene_count":0,"genotype_count":0,"name":"obsolete mirror-image polydactyly (obsolete MONDO:0034678)","termid":"MONDO:0034678","xrefs":{"Monarch":{"xref_id":"0034678"}}}


id: PR:O13969
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24C9.09 gene.","definition_xrefs":["UniProtKB:O13969","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.09","synonyms":[{"name":"Spom972h-SPAC24C9.09","type":"exact"},{"name":"ThrRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"threonyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13969"}


id: FYPO:0001894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain more or fewer than four spores form following conjugation and subsequent sporulation.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000121","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","synonyms":[{"name":"abnormal ascospore formation resulting in formation of asci with more or fewer than four spores","type":"exact"},{"name":"abnormal spore number","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci with more or fewer than four spores","type":"exact"}],"termid":"FYPO:0001894"}


id: GO:0052746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing one or more phosphate groups into inositol. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol phosphorylation (obsolete GO:0052746)","synonyms":[{"name":"inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol phosphorylation","type":"narrow"}],"termid":"GO:0052746"}


id: MONDO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the brain and meninges.","definition_xrefs":["NCIT:C3633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system hemangioma","termid":"MONDO:0003241"},{"relation_name":"is_a","term_name":"benign neoplasm of brain","termid":"MONDO:0021451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracranial hemangioma","secondary_identifiers":["ICD9:228.02","DOID:2517","MEDGEN:57582","ICD10CM:D18.02","SCTID:93468003","UMLS:C0154050"],"synonyms":[{"name":"angioma of intracranial structure","type":"exact"},{"name":"angioma of the intracranial structure","type":"exact"},{"name":"brain hemangioma","type":"broad"},{"name":"hemangioma of brain","type":"exact"},{"name":"hemangioma of intracranial structure","type":"exact"},{"name":"hemangioma of intracranial structures","type":"exact"},{"name":"hemangioma of the intracranial structure","type":"exact"},{"name":"intracranial angioma","type":"exact"},{"name":"intracranial hemangioma","type":"exact"},{"name":"intracranial structure hemangioma","type":"related"}],"termid":"MONDO:0002328","xrefs":{"Monarch":{"xref_id":"0002328"}}}


id: PBO:0008889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide matMc","termid":"PBO:0008889"}


id: PBO:0033769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cytoplasm_with_protein_mislocalized_to_nucleus_during_mitotic_interphase","termid":"PBO:0033769"}


id: GO:0140429
data:
  {"annotated_genes":["SJAG_00082","SJAG_04140","SJAG_03048","SJAG_01805","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91844,95670,104299,113183,118684],"is_not":false,"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic sister chromatid biorientation, the mitotic cell cycle process in which sister chromatids establish stable, end-on attachments to the plus ends of microtubules emanating from opposite spindle poles, oriented such that separation can proceed.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:vw","PMID:21306900","PMID:15525536","PMID:20739936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle spindle assembly checkpoint signaling","termid":"GO:0072479"},{"relation_name":"is_a","term_name":"repair of mitotic kinetochore microtubule attachment defect","termid":"GO:0140273"},{"relation_name":"is_a","term_name":"positive regulation of attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1902425"},{"relation_name":"positively_regulates","term_name":"mitotic sister chromatid biorientation","termid":"GO:1990758"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000070"],"is_obsolete":false,"name":"positive regulation of mitotic sister chromatid biorientation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990598","GO:0098783"],"synonyms":[{"name":"correction of merotelic kinetochore attachment, mitotic","type":"narrow"},{"name":"correction of mono-orientation defects","type":"narrow"},{"name":"correction of syntelic kinetochore attachment, mitotic","type":"narrow"},{"name":"repair of mitotic merotelic kinetochore attachment defect","type":"narrow"},{"name":"repair of mitotic merotelic kinetochore attachment defects","type":"narrow"},{"name":"repair of mitotic mono-orientation defect","type":"narrow"},{"name":"repair of mitotic mono-orientation defects","type":"narrow"}],"termid":"GO:0140429","terms_by_termid":{"GO:0140429":null}}


id: PBO:0057603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 940","termid":"PBO:0057603"}


id: MONDO:1012761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in dogs due to a mutation in the COL6A1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, COL6A1-related, dog","secondary_identifiers":["OMIA:001967-9615"],"synonyms":[{"name":"muscular dystrophy, Ullrich type, COL6A1-related, dog","type":"related"}],"termid":"MONDO:1012761","xrefs":{"Monarch":{"xref_id":"1012761"}}}


id: GO:0090077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:add","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"foam cell differentiation","termid":"GO:0090077"}


id: PBO:0091242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic acid transmembrane transporter","termid":"PBO:0091242"}


id: GO:0051995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the selenium atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"Se-methyltransferase activity","termid":"GO:0051995"}


id: GO:0047698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanyl-CoA = acryloyl-CoA + NH3.","definition_xrefs":["EC:4.3.1.6","MetaCyc:BETA-ALANYL-COA-AMMONIA-LYASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"beta-alanyl-CoA ammonia-lyase activity","secondary_identifiers":["RHEA:12416"],"synonyms":[{"name":"b-alanyl-CoA ammonia-lyase activity","type":"exact"},{"name":"beta-alanyl coenzyme A ammonia-lyase activity","type":"related"},{"name":"beta-alanyl-CoA ammonia-lyase (acryloyl-CoA-forming)","type":"related"}],"termid":"GO:0047698"}


id: GO:0031992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The biological transducer activity that accepts energy and converts it to another form, often by transfer to another molecule within the cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular transducer activity","termid":"GO:0060089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"energy transducer activity","synonyms":[{"name":"light harvesting activity","type":"related"},{"name":"photon capture","type":"related"}],"termid":"GO:0031992"}


id: GO:0015733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which shikimate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"shikimate transmembrane transport","synonyms":[{"name":"shikimate transport","type":"related"}],"termid":"GO:0015733"}


id: PBO:0004588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNA","termid":"PBO:0004588"}


id: RO:0002108
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a muscle and a motor neuron that synapses to it via a type II bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_by","termid":"RO:0002103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_by_via_type_II_bouton","termid":"RO:0002108"}


id: GO:0004478
data:
  {"annotated_genes":["SJAG_03659"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76785],"is_not":false,"summary":null,"term":"GO:0004478"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine.","definition_xrefs":["EC:2.5.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03659":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"methionine adenosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-174391","MetaCyc:S-ADENMETSYN-RXN","Reactome:R-HSA-5603087","Reactome:R-HSA-5603114","RHEA:21080"],"synonyms":[{"name":"ATP-methionine adenosyltransferase activity","type":"related"},{"name":"ATP:L-methionine S-adenosyltransferase activity","type":"related"},{"name":"AdoMet synthetase activity","type":"related"},{"name":"S-adenosyl-L-methionine synthetase activity","type":"related"},{"name":"S-adenosylmethionine synthase activity","type":"related"},{"name":"S-adenosylmethionine synthetase activity","type":"related"},{"name":"adenosylmethionine synthetase activity","type":"related"},{"name":"methionine S-adenosyltransferase activity","type":"related"},{"name":"methionine-activating enzyme","type":"related"}],"termid":"GO:0004478","terms_by_termid":{"GO:0004478":null}}


id: GO:0009941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast envelope","termid":"GO:0009941"}


id: PBO:0001344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp5 (predicted)","termid":"PBO:0001344"}


id: GO:0008525
data:
  {"annotated_genes":["SJAG_01731","SJAG_00669","SJAG_02897","SJAG_03746"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96297,99826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[102104,96298,99827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[99451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of phosphatidylcholine into, out of or within a cell, or between cells. Phosphatidylcholine refers to a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_02897":null,"SJAG_03746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylcholine transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylcholine transmembrane transporter activity","type":"narrow"}],"termid":"GO:0008525","terms_by_termid":{"GO:0090554":null,"GO:0120019":null,"GO:0140345":null}}


id: PBO:0085455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potassium transporter that mediates K+ influx; activates high-affinity Ca2+ influx system (HACS) during mating pheromone response; expression up-regulated in response to alpha factor; localized to sites of polarized growth; member of a fungal-specific gene family; potential Cdc28p substrate; KCH1 has a paralog, PRM6, that arose from the whole genome duplication","termid":"PBO:0085455"}


id: MONDO:0000920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the duodenum. Representative examples include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C9328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine cancer","termid":"MONDO:0000956"},{"relation_name":"is_a","term_name":"tumor of duodenum","termid":"MONDO:0021375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"duodenum cancer","secondary_identifiers":["UMLS:C0153426","DOID:10021","SCTID:363403002","MESH:D004379","ICD9:152.0","MEDGEN:56301"],"synonyms":[{"name":"cancer of duodenum","type":"exact"},{"name":"duodenal cancer","type":"exact"},{"name":"duodenum cancer","type":"exact"},{"name":"malignant duodenal neoplasm","type":"exact"},{"name":"malignant duodenal tumor","type":"exact"},{"name":"malignant duodenal tumour","type":"exact"},{"name":"malignant duodenum neoplasm","type":"exact"},{"name":"malignant neoplasm of duodenum","type":"exact"},{"name":"malignant neoplasm of the duodenum","type":"exact"},{"name":"malignant tumor of duodenum","type":"exact"},{"name":"malignant tumor of the duodenum","type":"exact"},{"name":"malignant tumour of duodenum","type":"exact"},{"name":"malignant tumour of the duodenum","type":"exact"}],"termid":"MONDO:0000920","xrefs":{"Monarch":{"xref_id":"0000920"}}}


id: GO:0160175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a somatic muscle attaches to the chitin-based cuticle. In insects, this may occur via a specialized epithelial cell adherence to the chitinous extracellular matrix and to muscle cells through their basement membrane.","definition_xrefs":["PMID:35675426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic muscle attachment to chitin-based cuticle","termid":"GO:0160175"}


id: GO:0044215
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete other organism (obsolete GO:0044215)","termid":"GO:0044215"}


id: PATO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's being covered with warts or projections that resemble warts resulting in a hard rough surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rough","termid":"PATO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"warty","termid":"PATO:0001361"}


id: GO:1903617
data:
  {"annotated_genes":["SJAG_00845","SJAG_02838","SJAG_02392","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92616,105624,112743,121411],"is_not":false,"summary":null,"term":"GO:1903617"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cytokinesis, division site positioning.","definition_xrefs":["PMID:9852154","PMID:21246752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis, division site positioning","termid":"GO:1902472"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"positive regulation of cytokinesis, site selection","termid":"GO:2000076"},{"relation_name":"positively_regulates","term_name":"mitotic cytokinesis, division site positioning","termid":"GO:1902408"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"positive regulation of mitotic cytokinesis, site selection","type":"exact"}],"termid":"GO:1903617","terms_by_termid":{"GO:1903617":null}}


id: MONDO:1011235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia that occurs in Nile tilapia.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, non-human animal","termid":"MONDO:1010324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, Nile tilapia","secondary_identifiers":["OMIA:000649-8128"],"termid":"MONDO:1011235","xrefs":{"Monarch":{"xref_id":"1011235"}}}


id: PBO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothetical protein","termid":"PBO:0000074"}


id: FYPO:0006692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal mitotic sister chromatid separation, producing inviable daughter cells, and in which the septum forms so as to separate the nucleus into two unequal masses, each in one compartment.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000337","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0000631"],"is_obsolete":false,"name":"cut with septum between unequally sized nuclei","synonyms":[{"name":"cut with septum between unequally sized nuclei during mitotic cell cycle","type":"related"},{"name":"cut with septum between unequally sized nuclei during vegetative growth","type":"exact"},{"name":"cut with unequally sized nuclei, one either side of septum","type":"exact"},{"name":"septation following abnormal mitotic sister chromatid segregation, with septum between unequally sized nuclei","type":"exact"}],"termid":"FYPO:0006692"}


id: GO:0005527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a macrolide, any of a large group of structurally related antibiotics produced by Streptomyces species.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"macrolide binding","termid":"GO:0005527"}


id: PBO:0088271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl5","termid":"PBO:0088271"}


id: PBO:0083390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps IES1/YFL013C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083390"}


id: MONDO:0100209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X inactivation, familial skewed","termid":"MONDO:0100209","xrefs":{"Monarch":{"xref_id":"0100209"}}}


id: GO:0170062
data:
  {"annotated_genes":["SJAG_02980","SJAG_01537","SJAG_04041","SJAG_04059","SJAG_03609","SJAG_03162","SJAG_02763","SJAG_04049","SJAG_01180","SJAG_01906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116183,112967,96524,90604,114046,63006,120911],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140042"},{"annotations":[121511,111701,91877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019915"}]},"cv_name":"biological_process","definition":"The accumulation and maintenance in cells or tissues of a nutrient, a substance that is used by an organism to survive, to grow, and to reproduce; such as proteins, vitamins, and minerals. Nutrient reserves can be accumulated for mobilization and utilization when needed.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01537":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nutrient storage","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:26774782":null},"termid":"GO:0170062","terms_by_termid":{"GO:0019915":null,"GO:0140042":null}}


id: GO:0009851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:lm","GOC:lr","ISBN:0122146743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auxin biosynthetic process","synonyms":[{"name":"auxin anabolism","type":"exact"},{"name":"auxin biosynthesis","type":"exact"},{"name":"auxin formation","type":"exact"},{"name":"auxin synthesis","type":"exact"}],"termid":"GO:0009851"}


id: GO:1990477
data:
  {"annotated_genes":["SJAG_04768","SJAG_03939","SJAG_00456","SJAG_02382","SJAG_00701"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89311,92636,111224,113835,114742],"is_not":false,"summary":null,"term":"GO:1990477"}]},"cv_name":"cellular_component","definition":"Protein complex formed by an RNA binding protein Red1, an RNA helicase Mtl1, Red5, Rmn1, Iss10/Pir1, and Ars2/Pir2. This complex is required for the recruitment of the nuclear exosome to Mmi1 nuclear focus. It is likely related to the human CBCN complex. This complex is also known as RNA silencing (NURS) complex.","definition_xrefs":["PMID:24210919","PMID:24713849","PMID:32012158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00456":null,"SJAG_00701":null,"SJAG_02382":null,"SJAG_03939":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MTREC complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990345"],"synonyms":[{"name":"Mtl1-Red1 core complex","type":"exact"},{"name":"NURS complex","type":"exact"},{"name":"PAXT complex","type":"exact"}],"termid":"GO:1990477","terms_by_termid":{"GO:1990477":null}}


id: MOD:00686
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-selenocysteine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:6217842","PubMed:6714945","PubMed:2963330","RESID:AA0022#CYS","Unimod:162#C","PubMed:10523135","PubMed:2037562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium substitution for sulfur","termid":"MOD:00007"},{"relation_name":"is_a","term_name":"L-selenocysteine residue","termid":"MOD:00031"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-selenocysteine (Cys)","synonyms":[{"name":"(2R)-2-amino-3-selanylpropanoic acid","type":"exact"},{"name":"2-azanyl-3-selanylpropanoic acid","type":"exact"},{"name":"3-selenylalanine","type":"exact"},{"name":"L-selenocysteine","type":"exact"},{"name":"NON_STD Selenocysteine","type":"exact"},{"name":"SeCys","type":"exact"},{"name":"Sec(Cys)","type":"exact"},{"name":"selenium cysteine","type":"exact"}],"termid":"MOD:00686"}


id: PR:O43010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycylpeptide N-tetradecanoyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.11","synonyms":[{"name":"NMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-myr1","type":"exact"},{"name":"myristoyl-CoA:protein N-myristoyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peptide N-myristoyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43010"}


id: GO:0050251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinol = 11-cis-retinol.","definition_xrefs":["RHEA:19141","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"retinol isomerase activity","secondary_identifiers":["Reactome:R-HSA-2465926","KEGG_REACTION:R02369"],"synonyms":[{"name":"all-trans-retinol 11-cis-trans-isomerase activity","type":"exact"},{"name":"all-trans-retinol isomerase activity","type":"exact"}],"termid":"GO:0050251"}


id: PBO:0112604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN signalling GTPase Spg1","termid":"PBO:0112604"}


id: PBO:0001181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L1 (predicted)","termid":"PBO:0001181"}


id: GO:0180033
data:
  {"annotated_genes":["SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111447],"is_not":false,"summary":null,"term":"GO:0180033"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 8) + H2O = histone H4 L-lysine (position 8) + acetate. This reaction represents the removal of an acetyl group from lysine at position 8 of the histone H4 protein.","definition_xrefs":["PMID:37459529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K deacetylase activity","termid":"GO:0141051"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0019213","GO:0033558","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H4K8 deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H4K48 deacetylase activity","type":"broad"}],"termid":"GO:0180033","terms_by_termid":{"GO:0180033":null}}


id: PBO:0003468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 family co-repressor Pst3","termid":"PBO:0003468"}


id: PBO:0083243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; extensively overlaps essential OST2 gene encoding a subunit of the ER lumen oligosaccharyltransferase complex","termid":"PBO:0083243"}


id: PBO:0065290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 4","termid":"PBO:0065290"}


id: FYPO:0004742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the outer repeat region of the centromere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing at centromere","termid":"FYPO:0002360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin silencing at centromere outer repeat","synonyms":[{"name":"normal centromere outer repeat region chromatin silencing","type":"exact"},{"name":"normal chromatin silencing at centromere otr","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"normal chromatin silencing at pericentric region","type":"related"},{"name":"normal chromatin silencing at pericentromeric region","type":"related"},{"name":"normal heterochromatic silencing at centromere outer repeat region","type":"exact"},{"name":"normal heterochromatin silencing at centromere outer repeat region","type":"exact"}],"termid":"FYPO:0004742"}


id: PBO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase Stp1","termid":"PBO:0002266"}


id: FYPO:0002327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a sterol measured in a cell is higher than normal. A sterol is any natural product derived from the steroid skeleton and containing a hydroxy group in the 3 position, closely related to cholestan-3-ol.","definition_xrefs":["CHEBI:15889","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular sterol level","termid":"FYPO:0002325"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular sterol level","synonyms":[{"name":"increased cellular sterol level during mitotic cell cycle","type":"related"},{"name":"increased cellular sterol level during vegetative growth","type":"exact"},{"name":"increased sterol level","type":"exact"}],"termid":"FYPO:0002327"}


id: GO:0021780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a glial cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"glial cell fate commitment","termid":"GO:0021781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell fate specification","termid":"GO:0021780"}


id: GO:0062177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the radial spoke, a protein complex that links the outer microtubule doublet of the ciliary or flagellum axoneme with the sheath that surrounds the central pair of microtubules.","definition_xrefs":["PMID:21613541","PMID:24124175","PMID:27940518","PMID:8408197","PMID:21692193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"radial spoke assembly","termid":"GO:0062177"}


id: GO:0060033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which an anatomical structure is destroyed as a part of its normal progression.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure regression","synonyms":[{"name":"histolysis","type":"related"},{"name":"tissue death","type":"related"}],"termid":"GO:0060033"}


id: PBO:0028404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ubiquinone_binding","termid":"PBO:0028404"}


id: PBO:0090793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone Pac3","termid":"PBO:0090793"}


id: PBO:0077283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 26","termid":"PBO:0077283"}


id: MONDO:0010480
data:
  {"annotated_genes":["SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87081],"is_not":false,"summary":null,"term":"MONDO:0010480"}]},"cv_name":"mondo","definition":"Any nonspherocytic hemolytic anemia in which the cause of the disease is a variation in the G6PD gene resulting in severely decreased activity levels of the enzyme glucose-6-phosphate dehydrogenase. Individuals with hemizygous or homozygous G6PD variants associated with chronic nonspherocytic hemolytic anemia (CNSHA) will clinically manifest CNSHA. Individuals with G6PD variants that cause CNSHA are at risk for severe neonatal jaundice and acute exacerbation of their chronic hemolytic anemia in response to certain medication exposures, chemical exposures, infections, or consumption of fava beans.","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia, nonspherocytic hemolytic","termid":"MONDO:0000105"},{"relation_name":"is_a","term_name":"G6PD deficiency","termid":"MONDO:0005775"},{"relation_name":"is_a","term_name":"inborn disorder of pentose phosphate metabolism","termid":"MONDO:0019231"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"anemia, nonspherocytic hemolytic, due to G6PD deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:300908","Orphanet:466026","MEDGEN:403555","GARD:6520","UMLS:C2720289","MESH:C567533"],"synonyms":[{"name":"Class I G6PD deficiency","type":"exact"},{"name":"anemia, congenital, nonspherocytic hemolytic, 1, G6PD deficient","type":"exact"},{"name":"anemia, nonspherocytic hemolytic, due to G6PD deficiency","type":"exact"},{"name":"class I glucose-6-phosphate dehydrogenase deficiency","type":"exact"},{"name":"hemolytic anaemia due to G6PD deficiency","type":"exact"},{"name":"hemolytic anemia due to G6PD deficiency","type":"exact"},{"name":"hemolytic anemia, G6PD deficient (favism), X-linked dominant","type":"exact"},{"name":"severe hemolytic anaemia due to G6PD deficiency","type":"exact"},{"name":"severe hemolytic anemia due to G6PD deficiency","type":"exact"}],"termid":"MONDO:0010480","terms_by_termid":{"MONDO:0010480":null},"xrefs":{"Monarch":{"xref_id":"0010480"}}}


id: PBO:0083230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps YLL067C","termid":"PBO:0083230"}


id: PBO:0000362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoesterase motif","termid":"PBO:0000362"}


id: PBO:0030578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_alanine_level","termid":"PBO:0030578"}


id: MONDO:0968947
data:
  {"annotated_genes":["SJAG_04936"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88994],"is_not":false,"summary":null,"term":"MONDO:0968947"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04936":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder plus optic atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620784","UMLS:C5935605","MEDGEN:1859522"],"termid":"MONDO:0968947","terms_by_termid":{"MONDO:0968947":null},"xrefs":{"Monarch":{"xref_id":"0968947"}}}


id: PBO:0074471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothelin","termid":"PBO:0074471"}


id: FYPO:0006282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased at chromosome arms.","definition_xrefs":["PMID:28977643","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic recombination","termid":"FYPO:0000482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic recombination at chromosome arms","termid":"FYPO:0006282"}


id: MONDO:0022453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon benign proliferation of smooth muscle, blood vessels, collagenous stroma, and adipocytes, most commonly affecting inguinal lymph node.","definition_xrefs":["PMID:28899738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomyomatous hamartoma","secondary_identifiers":["UMLS:C2959445","MEDGEN:450938"],"termid":"MONDO:0022453","xrefs":{"Monarch":{"xref_id":"0022453"}}}


id: MONDO:0044037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by a reticular or fishnet pattern on the skin of lower extremities and other parts of the body. This red and blue pattern is due to deoxygenated blood in unstable dermal blood vessels. The condition is intensified by cold exposure and relieved by rewarming.","definition_xrefs":["MESH:D054068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vascular disease","termid":"MONDO:0005294"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"livedo reticularis","secondary_identifiers":["SCTID:238772004","UMLS:C0085642","MEDGEN:43223"],"synonyms":[{"name":"livedo racemosa","type":"related"},{"name":"livedo reticularis","type":"exact"}],"termid":"MONDO:0044037","xrefs":{"Monarch":{"xref_id":"0044037"}}}


id: GO:0042868
data:
  {"annotated_genes":["SJAG_03745","SJAG_01176","SJAG_00266","SJAG_01717"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109927],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060195"},{"annotations":[72380,90207,108214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01176":null,"SJAG_01717":null,"SJAG_03745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antisense RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"antisense RNA metabolism","type":"exact"}],"termid":"GO:0042868","terms_by_termid":{"GO:0060195":null,"GO:0071040":null}}


id: PATO:0001359
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having many wrinkles or creases on the surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rugose","termid":"PATO:0001359"}


id: PBO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-end-recognizing protein (predicted)","termid":"PBO:0002186"}


id: MOD:01137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of a lysine residue with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride, to form N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine.","definition_xrefs":["DeltaMass:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","termid":"MOD:01120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine","synonyms":[{"name":"PMC lysyl","type":"exact"},{"name":"PmcLys","type":"exact"}],"termid":"MOD:01137"}


id: PBO:0041698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 4","termid":"PBO:0041698"}


id: MONDO:0859226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniotubular dysplasia, Ikegawa type","secondary_identifiers":["OMIM:619727","UMLS:C5575335","DOID:0112340","MEDGEN:1806238"],"termid":"MONDO:0859226","xrefs":{"Monarch":{"xref_id":"0859226"}}}


id: PBO:0114502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A) RNA binding protein involved in nuclear mRNA export; component of the nuclear pore and nuclear RNA export factor; ubiquitin-associated (UBA) domain interacts with Mip6p; ortholog of human TAP","termid":"PBO:0114502"}


id: FYPO:0004976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which depolymerization (i.e. removal of tubulin dimers) of microtubules extending in front of a moving spindle pole body occurs at a greater rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0036078","PMID:16611238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0003194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body","synonyms":[{"name":"decreased microtubule stability ahead of moving spindle pole body","type":"related"},{"name":"decreased stability of forwards-extending microtubules","type":"related"},{"name":"increased microtubule shrinkage ahead of moving spindle pole body","type":"related"},{"name":"increased rate of forward-extending microtubule depolymerization","type":"exact"},{"name":"increased rate of microtubule catastrophe ahead of moving spindle pole body","type":"related"},{"name":"increased rate of microtubule depolymerisation ahead of moving spindle pole body","type":"exact"},{"name":"increased rate of microtubule depolymerization ahead of moving SPB","type":"exact"},{"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0004976"}


id: MONDO:0026732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism, congenital, nongoitrous","termid":"MONDO:0000045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothyroidism, congenital, nongoitrous, 9","secondary_identifiers":["DOID:0111835","UMLS:C5231396","OMIM:301035","MEDGEN:1684807"],"synonyms":[{"name":"CHNG9","type":"related"},{"name":"HYPOTHYROIDISM, CONGENITAL, NONGOITROUS, 9","type":"related"},{"name":"hypothyroidism, congenital, nongoitrous, 9, X-linked recessive","type":"exact"}],"termid":"MONDO:0026732","xrefs":{"Monarch":{"xref_id":"0026732"}}}


id: MONDO:0007033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paralysis of the abducens nerve.","definition_xrefs":["NCIT:C27592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve palsy","termid":"MONDO:0002782"},{"relation_name":"is_a","term_name":"abducens nerve disorder","termid":"MONDO:0020594"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abducens nerve palsy","secondary_identifiers":["OMIM:100200","UMLS:C4551519","MEDGEN:1645218","ICD9:378.54","SCTID:398963001","DOID:10865","icd11.foundation:2004845959"],"synonyms":[{"name":"6th nerve palsy","type":"related"},{"name":"VI nerve palsy","type":"related"},{"name":"VIth nerve disorder","type":"broad"},{"name":"VIth nerve paralysis","type":"exact"},{"name":"abducens nerve cranial nerve palsy","type":"exact"},{"name":"abducens nerve disease","type":"related"},{"name":"abducens nerve weakness","type":"exact"},{"name":"abducens palsy","type":"related"},{"name":"abducent nerve paralysis","type":"exact"},{"name":"cranial mononeuropathy VI","type":"related"},{"name":"cranial nerve VI palsy","type":"related"},{"name":"cranial nerve palsy of abducens nerve","type":"exact"},{"name":"disorder of abducent nerve","type":"exact"},{"name":"lateral rectus muscle denervation paresis","type":"exact"},{"name":"lateral rectus muscle innervation disorder","type":"exact"},{"name":"sixth cranial nerve disorder","type":"exact"},{"name":"sixth cranial nerve palsy","type":"related"},{"name":"sixth nerve palsy","type":"exact"},{"name":"sixth nerve paralysis","type":"exact"},{"name":"sixth or abducens nerve palsy","type":"exact"}],"termid":"MONDO:0007033","xrefs":{"Monarch":{"xref_id":"0007033"}}}


id: PBO:0004492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase (predicted)","termid":"PBO:0004492"}


id: PBO:0078309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (GTC) 5-1","termid":"PBO:0078309"}


id: PBO:0042030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC86 antisense RNA 1","termid":"PBO:0042030"}


id: PBO:0085538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S8, no bacterial homolog; RPS8B has a paralog, RPS8A, that arose from the whole genome duplication","termid":"PBO:0085538"}


id: MONDO:0010402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic X-linked intellectual disability characterized by moderate intellectual disability with variable occurrence of asthenic body habitus, dysmorphic features, autistic features, macrocephaly, seizures, myoclonic jerks, and hyporeflexia that has material basis in mutation in the GRIA3 gene on chromosome Xq25.","definition_xrefs":["PMID:17989220","PMID:24721225","DOID:0060823","PMID:19449417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic X-linked intellectual disability 94","secondary_identifiers":["UMLS:C2678051","OMIM:300699","MEDGEN:437111","MESH:C567479"],"synonyms":[{"name":"MRX94","type":"exact"},{"name":"MRXS29","type":"exact"},{"name":"MRXSW","type":"related"},{"name":"intellectual developmental disorder, X-linked, syndromic, Wu type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 94","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 29","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Wu type","type":"related"},{"name":"mental retardation, X-linked 94","type":"exact"},{"name":"mental retardation, X-linked, syndromic 29","type":"related"},{"name":"mental retardation, X-linked, syndromic, Wu type","type":"related"},{"name":"syndromic X-linked intellectual disability 29","type":"exact"},{"name":"syndromic X-linked intellectual disability 94","type":"exact"},{"name":"syndromic X-linked intellectual disability Wu type","type":"exact"},{"name":"syndromic X-linked intellectual disability due to GRIA3 anomalies","type":"exact"},{"name":"syndromic X-linked intellectual disability type 94","type":"exact"},{"name":"syndromic X-linked mental retardation 29","type":"exact"},{"name":"syndromic X-linked mental retardation Wu type","type":"exact"}],"termid":"MONDO:0010402","xrefs":{"Monarch":{"xref_id":"0010402"}}}


id: GO:0070531
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the BRCA1-BARD1 heterodimer, RAP80/UIMC1, BRCC3/BRCC36, BRE/BRCC45, FAM175A/CCDC98/Abraxas and MERIT40/NBA1, and specifically recognizes and binds K63-linked polyubiquitin chains present on histone H2A and H2AX at DNA damage sites.","definition_xrefs":["GOC:mah","PMID:19261749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"BRCA1-A complex","termid":"GO:0070531"}


id: MONDO:0014279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arrhythmogenic right ventricular dysplasia, familial, 13 (obsolete MONDO:0014279)","termid":"MONDO:0014279","xrefs":{"Monarch":{"xref_id":"0014279"}}}


id: PBO:0064145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX/knotted 1 homeobox 2","termid":"PBO:0064145"}


id: PBO:0057160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302e","termid":"PBO:0057160"}


id: MONDO:0009367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"McKusick-Kaufman syndrome is a very rare, genetic developmental disorder presenting in the neonatal period characterized by genitourinary malformations, polydactyly, and more rarely, congenital heart disease or gastrointestinal malformations.","definition_xrefs":["Orphanet:2473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"MKKS-related ciliopathy","termid":"MONDO:1040050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"McKusick-Kaufman syndrome","secondary_identifiers":["UMLS:C0948368","OMIM:236700","DOID:0111255","MESH:C538159","GARD:3427","MedDRA:10052312","ICD9:758.89","MEDGEN:184924","SCTID:702407009"],"synonyms":[{"name":"HMCS","type":"related"},{"name":"Kaufman McKusick syndrome","type":"related"},{"name":"Kaufman-Mckusick syndrome","type":"exact"},{"name":"MCKUSICK-Kaufman syndrome","type":"related"},{"name":"MKKS","type":"related"},{"name":"McKusick Kaufman syndrome","type":"related"},{"name":"McKusick-Kaufman syndrome","type":"exact"},{"name":"hydrometrocolpos syndrome","type":"related"},{"name":"hydrometrocolpos, postaxial polydactyly, and congenital heart malformation","type":"related"},{"name":"hydrometrocolpos-postaxial polydactyly syndrome","type":"exact"}],"termid":"MONDO:0009367","xrefs":{"Monarch":{"xref_id":"0009367"}}}


id: FYPO:0004504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which proteasome localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal proteasome localization","synonyms":[{"name":"normal proteasome localisation","type":"exact"},{"name":"normal proteasome localization during mitotic cell cycle","type":"related"},{"name":"normal proteasome localization during vegetative growth","type":"exact"},{"name":"normal proteasome location","type":"related"}],"termid":"FYPO:0004504"}


id: PBO:0050839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGB1 adjacent tumor promoting lncRNA","termid":"PBO:0050839"}


id: MONDO:0000028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epilepsy, hot water (obsolete MONDO:0000028)","termid":"MONDO:0000028","xrefs":{"Monarch":{"xref_id":"0000028"}}}


id: GO:0019112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrol + glucose = phenanthryl-beta-D-glucopyranoside + H2O.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"phenanthrol glycosyltransferase activity","termid":"GO:0019112"}


id: MONDO:1010788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in horses in which the cause of the disease is a mutation in the PLOD1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, horse","termid":"MONDO:1011495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, kyphoscoliotic type, PLOD1-related, horse","secondary_identifiers":["OMIA:001982-9796"],"synonyms":[{"name":"Fragile Foal Syndrome","type":"exact"},{"name":"kEDS","type":"exact"}],"termid":"MONDO:1010788","xrefs":{"Monarch":{"xref_id":"1010788"}}}


id: PBO:0075425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 11B","termid":"PBO:0075425"}


id: PATO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having a slanting direction (neither perpendicular nor parallel) relative to another entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblique to","termid":"PATO:0002513"}


id: PBO:0003421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med15 (predicted)","termid":"PBO:0003421"}


id: GO:1900358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nigerotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of nigerotriose transport","termid":"GO:1900357"},{"relation_name":"negatively_regulates","term_name":"nigerotriose transport","termid":"GO:2001091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nigerotriose transport","synonyms":[{"name":"down regulation of nigerotriose transport","type":"exact"},{"name":"down-regulation of nigerotriose transport","type":"exact"},{"name":"downregulation of nigerotriose transport","type":"exact"},{"name":"inhibition of nigerotriose transport","type":"narrow"}],"termid":"GO:1900358"}


id: MONDO:0009007
data:
  {"annotated_genes":["SJAG_04111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87172],"is_not":false,"summary":null,"term":"MONDO:0009007"}]},"cv_name":"mondo","definition":"Jalili syndrome is characterized by the association of amelogenesis imperfecta (AI) and cone-rod retinal dystrophy (CORD).","definition_xrefs":["Orphanet:1873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04111":null},"genotype_count":0,"is_obsolete":false,"name":"Jalili syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:217080","SCTID:707608003","GARD:1463","ICD10CM:H35.5","DOID:0111404","MEDGEN:501210","ICD9:520.5","ICD9:362.75","MESH:C000596385","UMLS:C3495589"],"synonyms":[{"name":"Jalili syndrome","type":"exact"},{"name":"cone rod dystrophy-amelogenesis imperfecta syndrome","type":"exact"},{"name":"cone-rod dystrophy amelogenesis imperfecta","type":"related"},{"name":"cone-rod dystrophy and amelogenesis imperfecta","type":"related"},{"name":"cone-rod dystrophy with amelogenesis imperfecta","type":"related"}],"termid":"MONDO:0009007","terms_by_termid":{"MONDO:0009007":null},"xrefs":{"Monarch":{"xref_id":"0009007"}}}


id: MONDO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glomus tumor arising from the skin. It is characterized by the presence of dilated veins surrounded by glomus cells.","definition_xrefs":["NCIT:C6750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin glomus tumor","termid":"MONDO:0002295"},{"relation_name":"is_a","term_name":"glomangioma","termid":"MONDO:0002299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous glomangioma","secondary_identifiers":["UMLS:C1275226","DOID:2435","MEDGEN:266155","SCTID:403970001"],"synonyms":[{"name":"cutaneous glomangioma","type":"exact"},{"name":"glomangioma of skin","type":"exact"},{"name":"glomangioma of the skin","type":"exact"},{"name":"skin glomangioma","type":"exact"},{"name":"zone of skin glomangioma","type":"exact"}],"termid":"MONDO:0002298","xrefs":{"Monarch":{"xref_id":"0002298"}}}


id: PBO:0046204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B pseudogene 1","termid":"PBO:0046204"}


id: PBO:0117251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lipoate-protein ligase A","termid":"PBO:0117251"}


id: GO:0048331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the axial mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"axial mesoderm morphogenesis","termid":"GO:0048319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm structural organization","synonyms":[{"name":"axial mesoderm structural organisation","type":"exact"}],"termid":"GO:0048331"}


id: MONDO:0002244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A coagulation disorder characterized by the partial or complete absence of factor VII activity in the blood.","definition_xrefs":["NCIT:C131631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor VII deficiency","secondary_identifiers":["SCTID:37193007","ICD9:286.3","MEDGEN:8769","MESH:D005168","NANDO:2200675","UMLS:C0015503"],"synonyms":[{"name":"F7 deficiency","type":"exact"},{"name":"deficiency, stable","type":"exact"},{"name":"factor 7 deficiency","type":"exact"},{"name":"factor VII deficiency","type":"exact"}],"termid":"MONDO:0002244","xrefs":{"Monarch":{"xref_id":"0002244"}}}


id: MONDO:0013143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary avascular necrosis","termid":"MONDO:0018374"},{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"},{"relation_name":"is_a","term_name":"inherited thrombophilia","termid":"MONDO:0100240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary thrombophilia due to congenital histidine-rich (poly-L) glycoprotein deficiency","secondary_identifiers":["OMIM:613116","Orphanet:217467","MEDGEN:416465","DOID:0111903","UMLS:C2751090","icd11.foundation:1764310021","GARD:17125","MESH:C567737"],"synonyms":[{"name":"THPH11","type":"related"},{"name":"hereditary thrombophilia due to congenital HRG deficiency","type":"exact"},{"name":"thrombophilia 11 due to HRG deficiency","type":"exact"},{"name":"thrombophilia due to elevated histidine-rich glycoprotein","type":"related"},{"name":"thrombophilia due to histidine-rich glycoprotein deficiency","type":"related"}],"termid":"MONDO:0013143","xrefs":{"Monarch":{"xref_id":"0013143"}}}


id: GO:1901616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of organic hydroxy compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic hydroxy compound catabolic process (obsolete GO:1901616)","synonyms":[{"name":"organic hydroxy compound breakdown","type":"exact"},{"name":"organic hydroxy compound catabolism","type":"exact"},{"name":"organic hydroxy compound degradation","type":"exact"}],"termid":"GO:1901616"}


id: PBO:0045362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 2","termid":"PBO:0045362"}


id: PBO:0029328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation","termid":"PBO:0029328"}


id: PBO:0086539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YBR032W is not an essential gene","termid":"PBO:0086539"}


id: GO:0042163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the beta subunit of interleukin-12.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-12 binding","termid":"GO:0019972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-12 beta subunit binding","synonyms":[{"name":"CLMFp40 binding","type":"exact"},{"name":"IL-12B binding","type":"exact"},{"name":"IL-12p40 binding","type":"exact"},{"name":"NKSFp40 binding","type":"exact"}],"termid":"GO:0042163"}


id: PBO:0039479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A2, pseudogene","termid":"PBO:0039479"}


id: GO:0002937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes whereby a uridine residue in a tRNA is converted to 4-thiouridine. Typically 4-thiouridine is found at position 8, in many transfer RNAs.","definition_xrefs":["ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA thio-modification","termid":"GO:0034227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA 4-thiouridine biosynthesis","termid":"GO:0002937"}


id: PBO:0070473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 8","termid":"PBO:0070473"}


id: PBO:0079508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 6","termid":"PBO:0079508"}


id: PBO:0000909
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDRC and RITS complexes associate together, and with non coding centromeric RNA in a Dcr1 (hence siRNA) and Clr4 dependent manner","termid":"PBO:0000909"}


id: GO:0102823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + kaempferol-3-rhamnoside = kaempferol 3-O-rhamnoside-7-O-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol-3-rhamnoside-glucosyltransferase activity (obsolete GO:0102823)","termid":"GO:0102823"}


id: GO:0014049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled release of glutamate.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate secretion","termid":"GO:0014048"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"glutamate secretion","termid":"GO:0014047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of glutamate secretion","synonyms":[{"name":"activation of glutamate secretion","type":"narrow"},{"name":"stimulation of glutamate secretion","type":"narrow"},{"name":"up regulation of glutamate secretion","type":"exact"},{"name":"up-regulation of glutamate secretion","type":"exact"},{"name":"upregulation of glutamate secretion","type":"exact"}],"termid":"GO:0014049"}


id: PR:P0CT76
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.13","synonyms":[{"name":"Spom972h-rps2302","type":"exact"}],"termid":"PR:P0CT76"}


id: MONDO:0022007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from the excessive retention of water with sodium depletion.","definition_xrefs":["MESH:D014869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"water intoxication","secondary_identifiers":["MEDGEN:53061","UMLS:C0043049","SCTID:71785001"],"synonyms":[{"name":"WATER INTOX","type":"related"},{"name":"Water Intoxication","type":"related"},{"name":"Water intoxication","type":"related"},{"name":"Water intoxication syndrome","type":"related"},{"name":"water intoxication syndrome","type":"exact"}],"termid":"MONDO:0022007","xrefs":{"Monarch":{"xref_id":"0022007"}}}


id: PBO:0055573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3009","termid":"PBO:0055573"}


id: PBO:0068305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 10","termid":"PBO:0068305"}


id: GO:1903338
data:
  {"annotated_genes":["SJAG_03655","SJAG_00610","SJAG_04771","SJAG_01787","SJAG_00424","SJAG_02278","SJAG_02258","SJAG_02684","SJAG_03704","SJAG_04668","SJAG_00163","SJAG_03705","SJAG_04522","SJAG_01255","SJAG_00661","SJAG_04551","SJAG_04462","SJAG_04659","SJAG_01181","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75924,109567,110408,112078],"is_not":false,"summary":null,"term":"GO:1903338"},{"annotations":[104063,112959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903340"},{"annotations":[89341,94281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[107284,92617,119921,94265,107859,120054,69407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[94287,91282,104769,96819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"},{"annotations":[104066,102088,67915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032995"},{"annotations":[73307,89424,112960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell wall organization or biogenesis.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_01181":null,"SJAG_01255":null,"SJAG_01787":null,"SJAG_02258":null,"SJAG_02278":null,"SJAG_02684":null,"SJAG_03655":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"regulation of cell wall organization or biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"regulation of cellular cell wall organization or biogenesis","type":"exact"}],"termid":"GO:1903338","terms_by_termid":{"GO:0032995":null,"GO:0060237":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null,"GO:1903338":null,"GO:1903340":null}}


id: PBO:0052810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 76","termid":"PBO:0052810"}


id: PBO:0001031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-mannosyltransferase II complex subunit Pga1 (predicted)","termid":"PBO:0001031"}


id: GO:0071903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein N-linked glycosylation via asparagine in which N-acetylglucosamine is added to the N4 of asparagine, forming an (S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)amino-4-oxobutanoic acid residue.","definition_xrefs":["RESID:AA0151","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete protein N-linked N-acetylglucosaminylation via asparagine (obsolete GO:0071903)","synonyms":[{"name":"protein amino acid N-linked N-acetylglucosaminylation via asparagine","type":"exact"}],"termid":"GO:0071903"}


id: GO:0006302
data:
  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id: PBO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.16","termid":"PBO:0000198"}


id: GO:0072741
data:
  {"annotated_genes":["SJAG_04597","SJAG_00333","SJAG_00279","SJAG_04703","SJAG_02645","SJAG_02022","SJAG_03602","SJAG_04461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97540],"is_not":false,"summary":null,"term":"GO:0072741"},{"annotations":[96276],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[100324],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120047"},{"annotations":[92991,107297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071574"},{"annotations":[94187,120673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"},{"annotations":[109912],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, the site of cell division.","definition_xrefs":["GOC:mah","PMID:19756689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00333":null,"SJAG_02022":null,"SJAG_02645":null,"SJAG_03602":null,"SJAG_04461":null,"SJAG_04597":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell division site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cell division site","type":"exact"}],"termid":"GO:0072741","terms_by_termid":{"GO:0071574":null,"GO:0072741":null,"GO:0120047":null,"GO:0140325":null,"GO:1904498":null,"GO:1905391":null}}


id: MONDO:0044767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pheochromocytoma of the adrenal gland that occurs during childhood.","definition_xrefs":["NCIT:C118822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland pheochromocytoma","termid":"MONDO:0004974"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood adrenal gland pheochromocytoma","secondary_identifiers":["UMLS:C3899677","GTR:AN0102113","DOID:0070325","MEDGEN:859271"],"synonyms":[{"name":"childhood adrenal gland pheochromocytoma","type":"exact"},{"name":"malignant childhood adrenal gland pheochromocytoma","type":"exact"},{"name":"pheochromocytoma, childhood","type":"related"}],"termid":"MONDO:0044767","xrefs":{"Monarch":{"xref_id":"0044767"}}}


id: MONDO:0020300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A seizure disorder characterized by intermittent dystonia and/or choreoathetoid movements that occur during sleep. The clusters of nocturnal motor seizures are often stereotyped and brief.","definition_xrefs":["Orphanet:98784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal lobe epilepsy","termid":"MONDO:0002612"},{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy","secondary_identifiers":["UMLS:C3696898","DOID:0060681","SCTID:698021005","icd11.foundation:1004734747","GARD:11918","MEDGEN:777188","ICD9:345.80","MESH:C579932"],"synonyms":[{"name":"ADNFLE","type":"exact"},{"name":"ENFL","type":"exact"}],"termid":"MONDO:0020300","xrefs":{"Monarch":{"xref_id":"0020300"}}}


id: PBO:0108511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 and Rpd3L histone deacetylase complex subunit Sds3","termid":"PBO:0108511"}


id: PBO:0087991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase; deaminates adenosine-37 to inosine in tRNA-Ala","termid":"PBO:0087991"}


id: PBO:0081752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 681","termid":"PBO:0081752"}


id: MONDO:0008077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurofibromatosis, type 1 (obsolete MONDO:0008077)","termid":"MONDO:0008077","xrefs":{"Monarch":{"xref_id":"0008077"}}}


id: PBO:0081070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 3","termid":"PBO:0081070"}


id: GO:0103043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-ribose 1,2-cyclic phosphate 5-phosphate + H2O = alpha-D-ribose 1,5-bisphosphate + H+.","definition_xrefs":["EC:3.1.4.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"phosphoribosyl 1,2-cyclic phosphate phosphodiesterase activity","secondary_identifiers":["MetaCyc:RXN0-6710","RHEA:34795"],"synonyms":[{"name":"5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase activity","type":"related"}],"termid":"GO:0103043"}


id: PBO:0039059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 8","termid":"PBO:0039059"}


id: PBO:0041206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bystin like","termid":"PBO:0041206"}


id: PBO:0068278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1","termid":"PBO:0068278"}


id: PBO:0055200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2625","termid":"PBO:0055200"}


id: MONDO:0012507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone dystrophy in which the cause of the disease is a mutation in the CACNA2D4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone dystrophy","termid":"MONDO:0000455"},{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"CACNA2D4-related retinopathy","termid":"MONDO:0700244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal cone dystrophy 4","secondary_identifiers":["GARD:10650","MESH:C566470","OMIM:610478","DOID:0081023","MEDGEN:355308","UMLS:C1864849"],"synonyms":[{"name":"CACNA2D4 cone dystrophy","type":"exact"},{"name":"RCD4","type":"related"},{"name":"cone dystrophy caused by mutation in CACNA2D4","type":"exact"},{"name":"retinal cone dystrophy 4","type":"exact"},{"name":"retinal cone dystrophy type 4","type":"exact"}],"termid":"MONDO:0012507","xrefs":{"Monarch":{"xref_id":"0012507"}}}


id: PBO:0077245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 5B (pseudogene)","termid":"PBO:0077245"}


id: PBO:0038804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 8","termid":"PBO:0038804"}


id: PBO:0109226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall alpha-1,3-glucan synthase Mok12","termid":"PBO:0109226"}


id: GO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of T cell antigen processing and presentation","termid":"GO:0002625"},{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"positively_regulates","term_name":"T cell antigen processing and presentation","termid":"GO:0002457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell antigen processing and presentation","synonyms":[{"name":"activation of T cell antigen processing and presentation","type":"narrow"},{"name":"positive regulation of T lymphocyte antigen processing and presentation","type":"exact"},{"name":"positive regulation of T-cell antigen processing and presentation","type":"exact"},{"name":"positive regulation of T-lymphocyte antigen processing and presentation","type":"exact"},{"name":"stimulation of T cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of T cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of T cell antigen processing and presentation","type":"exact"},{"name":"upregulation of T cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002627"}


id: MONDO:0021075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"},{"relation_name":"is_a","term_name":"precancerous condition","termid":"MONDO:0021074"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic polyp","secondary_identifiers":["NCIT:C7068","MEDGEN:233751","UMLS:C1334941"],"synonyms":[{"name":"neoplastic polyp","type":"exact"}],"termid":"MONDO:0021075","xrefs":{"Monarch":{"xref_id":"0021075"}}}


id: GO:0044097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of proteins or DNA by a cell, via the type IV secretion system.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"secretion by the type IV secretion system","synonyms":[{"name":"secretion via the type IV secretion system","type":"exact"}],"termid":"GO:0044097"}


id: GO:1990065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in the MEP pathway of IPP biosynthesis. It catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).","definition_xrefs":["PMID:15339150","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Dxr protein complex","synonyms":[{"name":"1-deoxy-D-xylulose 5-phosphate reductoisomerase complex","type":"exact"}],"termid":"GO:1990065"}


id: PBO:0048795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAO1 antisense RNA 1","termid":"PBO:0048795"}


id: MONDO:0015431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 10 syndrome is characterized by intellectual deficit, growth retardation, and various dysmorphic features. Less than 20 cases have been described. The main features are low birth weight, microcephaly, stubby nose with a prominent nasal bridge, hypertelorism, strabismus, wide-set nipples, single transverse palmar creases, and clinodactyly. Boys have undescended testes and hypoplastic scrotum. Congenital heart disease, hydronephrosis or renal hypoplasia was present in some of the cases.","definition_xrefs":["Orphanet:1438"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chromosome 10 disorder","termid":"MONDO:0700017"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 10","secondary_identifiers":["UMLS:C0265438","GARD:1322","MESH:C538086","MEDGEN:539252","SCTID:86997002"],"synonyms":[{"name":"Ring 10","type":"related"},{"name":"Ring chromosome 10 syndrome","type":"related"},{"name":"Ring chromosome type 10","type":"exact"},{"name":"chromosome 10 ring","type":"related"},{"name":"r10","type":"related"}],"termid":"MONDO:0015431","xrefs":{"Monarch":{"xref_id":"0015431"}}}


id: PBO:0030361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_hypoxia","termid":"PBO:0030361"}


id: GO:1904379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein localization to cytosolic proteasome complex that is involved in ERAD pathway. Following their retrotranslocation out of the endoplasmic reticulum, protein substrates must be shuttled to the cytosolic proteasome for degradation.","definition_xrefs":["PMID:21636303","GO_REF:0000060","GOC:BHF","GOC:bf","GOC:PARL","GOC:nc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to cytosolic proteasome complex involved in ERAD pathway (obsolete GO:1904379)","termid":"GO:1904379"}


id: GO:0052473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the B-cell mediated immune response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont B-cell mediated immune response (obsolete GO:0052473)","synonyms":[{"name":"negative regulation by organism of symbiont B-cell mediated immune response","type":"exact"}],"termid":"GO:0052473"}


id: GO:0141217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The posttranscriptional addition of a carbohydrate or carbohydrate derivative unit to residues in an RNA molecule.","definition_xrefs":["PMID:39173631","PMID:34004145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"glycosylation","termid":"GO:0070085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA glycosylation","synonyms":[{"name":"glycoRNA biosynthesis","type":"exact"}],"termid":"GO:0141217"}


id: PBO:0069799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1085, pseudogene","termid":"PBO:0069799"}


id: PBO:0075204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 16","termid":"PBO:0075204"}


id: PBO:0044502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich tail 1","termid":"PBO:0044502"}


id: SO:0001939
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 12th residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K12_acetylation_site","synonyms":[{"name":"H4K12 acetylation site","type":"exact"},{"name":"H4K12ac","type":"exact"}],"termid":"SO:0001939"}


id: PR:Q1MTM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1327.01c gene.","definition_xrefs":["UniProtKB:Q1MTM9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1327.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1327.01c","synonyms":[{"name":"Spom972h-SPAC1327.01c","type":"exact"}],"termid":"PR:Q1MTM9"}


id: MONDO:0014038
data:
  {"annotated_genes":["SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89112],"is_not":false,"summary":null,"term":"MONDO:0014038"}]},"cv_name":"mondo","definition":"Any colorectal cancer in which the cause of the disease is a mutation in the POLE gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02908":null},"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615083","MEDGEN:767374","UMLS:C3554460"],"synonyms":[{"name":"CRCS12","type":"related"},{"name":"POLE colorectal cancer","type":"exact"},{"name":"colorectal cancer caused by mutation in POLE","type":"exact"},{"name":"colorectal cancer, susceptibility to, 12","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 12Q24","type":"related"},{"name":"colorectal cancer, susceptibility to, type 12","type":"exact"},{"name":"susceptibility to colorectal cancer 12","type":"related"}],"termid":"MONDO:0014038","terms_by_termid":{"MONDO:0014038":null},"xrefs":{"Monarch":{"xref_id":"0014038"}}}


