# terms

id: PBO:0048163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 8","termid":"PBO:0048163"}


id: PBO:0069952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1245, pseudogene","termid":"PBO:0069952"}


id: PR:000050502
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the dis1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"SPCC736.14","type":"related"},{"name":"Spom-dis1","type":"exact"},{"name":"dis1","type":"related"},{"name":"phosphoprotein p99","type":"exact"}],"termid":"PR:000050502"}


id: PBO:0075848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssu-2 homolog","termid":"PBO:0075848"}


id: PBO:0090753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp10","termid":"PBO:0090753"}


id: PBO:0059919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 5","termid":"PBO:0059919"}


id: PBO:0074741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 101A","termid":"PBO:0074741"}


id: PBO:0000980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps53 (predicted)","termid":"PBO:0000980"}


id: GO:0034729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to lysine at position 79 of the histone.","definition_xrefs":["GOC:se"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K79 methylation (obsolete GO:0034729)","synonyms":[{"name":"histone H3 K79 methylation","type":"exact"},{"name":"histone H3K79me","type":"exact"},{"name":"histone lysine H3 K79 methylation","type":"exact"}],"termid":"GO:0034729"}


id: GO:0106013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to the cell cortex of the cell tip.","definition_xrefs":["GOC:vw","PMID:19474792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex of cell tip","termid":"GO:1990895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell cortex of cell tip","termid":"GO:0106013"}


id: PBO:0065182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein S (beta) pseudogene","termid":"PBO:0065182"}


id: GO:0061951
data:
  {"annotated_genes":["SJAG_04609","SJAG_03838","SJAG_00330","SJAG_00916","SJAG_01114","SJAG_03915","SJAG_01516","SJAG_02282","SJAG_00858","SJAG_04565","SJAG_03029","SJAG_02912","SJAG_01809","SJAG_03970","SJAG_03756","SJAG_00379","SJAG_00144"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97598],"is_not":false,"summary":null,"term":"GO:0061951"},{"annotations":[93145,103042,114776,114993,61906,120917,67789,96775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[114995,71944,111551,79384,108991,110762,108363,97031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[89919],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a plasma membrane.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to plasma membrane","termid":"GO:0072659"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02282":null,"SJAG_02912":null,"SJAG_03029":null,"SJAG_03756":null,"SJAG_03838":null,"SJAG_03915":null,"SJAG_03970":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0061951","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0061951":null,"GO:0099638":null}}


id: GO:0052075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of the jasmonic acid-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host jasmonic acid-mediated defense response (obsolete GO:0052075)","synonyms":[{"name":"activation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"induction by organism of host JA-mediated defense response","type":"narrow"},{"name":"induction by organism of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of host JA-mediated defense response","type":"exact"},{"name":"positive regulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host jasmonic acid-mediated defense response","type":"exact"},{"name":"stimulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"up regulation by symbiont of host jasmonic acid-mediated defense response","type":"exact"},{"name":"up-regulation by symbiont of host jasmonic acid-mediated defense response","type":"exact"},{"name":"upregulation by symbiont of host jasmonic acid-mediated defense response","type":"exact"}],"termid":"GO:0052075"}


id: PBO:0041699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 5","termid":"PBO:0041699"}


id: PATO:0002313
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having or resembling the shape of a telescope.","definition_xrefs":["PATOC:BF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telescopic","termid":"PATO:0002313"}


id: PBO:0049434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 11","termid":"PBO:0049434"}


id: PBO:0040507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AVL9 cell migration associated","termid":"PBO:0040507"}


id: MONDO:0021126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An characteristic of a disease that varies depending on whether the disease appears as an isolated feature or whether the disease is a syndrome consisting of multiple features.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic or isolated","termid":"MONDO:0021126","xrefs":{"Monarch":{"xref_id":"0021126"}}}


id: GO:0034802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: branched-chain dodecylbenzene sulfonate + 1/2 O2 + H+ = sulfurous acid + branched-chain dodecyl-4-hydroxy-benzene + sulfite.","definition_xrefs":["UM-BBD_reactionID:r1079"],"gene_count":0,"genotype_count":0,"name":"obsolete branched-chain dodecylbenzene sulfonate monooxygenase activity (obsolete GO:0034802)","termid":"GO:0034802"}


id: PBO:0048625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIPC PDZ domain containing family member 1","termid":"PBO:0048625"}


id: MONDO:0009816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive malignant osteopetrosis in which the cause of the disease is a mutation in the TNFSF11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive osteopetrosis 2","secondary_identifiers":["MESH:C536059","OMIM:259710","DOID:0110943","GARD:4157","UMLS:C1850126","MEDGEN:342420"],"synonyms":[{"name":"OPTB2","type":"exact"},{"name":"TNFSF11 autosomal recessive malignant osteopetrosis","type":"exact"},{"name":"TNFSF11 autosomal recessive osteopetrosis","type":"exact"},{"name":"TNFSF11-related osteopetrosis","type":"exact"},{"name":"autosomal recessive malignant osteopetrosis caused by mutation in TNFSF11","type":"exact"},{"name":"autosomal recessive osteopetrosis caused by mutation in TNFSF11","type":"exact"},{"name":"autosomal recessive osteopetrosis type 2","type":"exact"},{"name":"mild autosomal recessive form osteopetrosis","type":"exact"},{"name":"osteoclast-poor osteopetrosis","type":"exact"},{"name":"osteopetrosis autosomal recessive 2","type":"related"},{"name":"osteopetrosis osteoclast-poor","type":"related"},{"name":"osteopetrosis, autosomal recessive 2","type":"related"},{"name":"osteopetrosis, autosomal recessive type 2","type":"exact"},{"name":"osteopetrosis, mild autosomal recessive form","type":"related"},{"name":"osteopetrosis, osteoclast-poor","type":"related"}],"termid":"MONDO:0009816","xrefs":{"Monarch":{"xref_id":"0009816"}}}


id: GO:0010092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of an animal organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"animal organ formation","termid":"GO:0048645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ identity","termid":"GO:0010092"}


id: PBO:0059059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1A pseudogene 2","termid":"PBO:0059059"}


id: PBO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0035780"}


id: PBO:0088756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillarin, rRNA and histone methyltransferase","termid":"PBO:0088756"}


id: PBO:0057638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1228","termid":"PBO:0057638"}


id: GO:0042027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptidylproline (omega=180) = peptidylproline (omega=0).","definition_xrefs":["EC:5.2.1.8"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclophilin-type peptidyl-prolyl cis-trans isomerase activity (obsolete GO:0042027)","synonyms":[{"name":"cyclophilin-type peptidyl-prolyl cis-trans isomerase activity","type":"exact"}],"termid":"GO:0042027"}


id: MONDO:0002837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poorly differentiated transitional cell carcinoma characterized by the presence of malignant cells with spindle cell morphologic features.","definition_xrefs":["NCIT:C4120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcomatoid transitional cell carcinoma","secondary_identifiers":["MEDGEN:83120","UMLS:C0334271","DOID:4014","ICDO:8122/3"],"synonyms":[{"name":"sarcomatoid transitional cell carcinoma","type":"exact"},{"name":"transitional cell carcinoma, sarcomatoid","type":"exact"},{"name":"transitional cell spindle cell carcinoma","type":"exact"},{"name":"transitional spindle cell carcinoma","type":"exact"}],"termid":"MONDO:0002837","xrefs":{"Monarch":{"xref_id":"0002837"}}}


id: PBO:0041428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 74","termid":"PBO:0041428"}


id: PBO:0050373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 76","termid":"PBO:0050373"}


id: MONDO:0002603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with perivascular epithelioid cell differentiation often associated with tuberous sclerosis. It is characterized by a mixture of epithelioid cells, smooth muscle, vessels, and mature adipose tissue. The kidney is the most common site of involvement. Other sites of involvement include the liver, lung, lymph nodes, and retroperitoneum. The vast majority of cases follow a benign clinical course. However, cases of metastatic angiomyolipomas with sarcomatoid features have been described.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomyolipoma","secondary_identifiers":["ICDO:8860/0","GARD:12024","MESH:D018207","NCIT:C3734","UMLS:C0206633","DOID:3314","MEDGEN:64622"],"synonyms":[{"name":"angiomyolipoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002603","xrefs":{"Monarch":{"xref_id":"0002603"}}}


id: GO:0140711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a Frizzled Nuclear Import pathway.","definition_xrefs":["PMID:22510459","PMID:22579286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Frizzled Nuclear Import pathway","termid":"GO:0140710"},{"relation_name":"is_a","term_name":"positive regulation of non-canonical Wnt signaling pathway","termid":"GO:2000052"},{"relation_name":"positively_regulates","term_name":"Frizzled Nuclear Import pathway","termid":"GO:0140709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Frizzled Nuclear Import pathway","synonyms":[{"name":"positive regulation of FNI","type":"broad"},{"name":"positive regulation of Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140711"}


id: GO:0051200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a prosthetic group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of prosthetic group metabolic process (obsolete GO:0051200)","synonyms":[{"name":"activation of prosthetic group metabolic process","type":"narrow"},{"name":"positive regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"positive regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"positive regulation of prosthetic group metabolism","type":"exact"},{"name":"stimulation of prosthetic group metabolic process","type":"narrow"},{"name":"up regulation of prosthetic group metabolic process","type":"exact"},{"name":"up-regulation of prosthetic group metabolic process","type":"exact"},{"name":"upregulation of prosthetic group metabolic process","type":"exact"}],"termid":"GO:0051200"}


id: MONDO:0016604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysraphism-cleft lip/palate-limb reduction defects syndrome","secondary_identifiers":["MEDGEN:1809965","UMLS:C5679624","Orphanet:2476","GARD:3438"],"synonyms":[{"name":"Medeira-Dennis-Donnai syndrome","type":"exact"},{"name":"dysraphism, cleft lip/palate, limb reduction defects","type":"related"}],"termid":"MONDO:0016604","xrefs":{"Monarch":{"xref_id":"0016604"}}}


id: PBO:0110107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane 1-phosphatidylinositol 4-kinase, type III-alpha Stt4","termid":"PBO:0110107"}


id: FYPO:0000680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A developmental process phenotype in which ascus development is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"},{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ascus development","termid":"FYPO:0000680"}


id: PBO:0027464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_primary_cell_septum_biogenesis","termid":"PBO:0027464"}


id: FYPO:0003240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphodiesterase I activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphodiesterase I activity","termid":"FYPO:0003239"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased phosphodiesterase I activity","synonyms":[{"name":"reduced phosphodiesterase I activity","type":"exact"}],"termid":"FYPO:0003240"}


id: PBO:0039402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 2","termid":"PBO:0039402"}


id: PBO:0057086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 182","termid":"PBO:0057086"}


id: MONDO:0017094
data:
  {"annotated_genes":["SJAG_00289","SJAG_03067","SJAG_02723","SJAG_05346","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88446,88442,88444,88443,88445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011818"}]},"cv_name":"mondo","definition":"Abnormalities in the development of the cerebral cortex. These include malformations arising from abnormal neuronal and glial cell proliferation or apoptosis (Group I); abnormal neuronal migration (Group ii); and abnormal establishment of cortical organization (Group iii). Many inborn metabolic brain disorders affecting cns formation are often associated with cortical malformations. They are common causes of epilepsy and developmental delay.","definition_xrefs":["MESH:D054220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"cerebral cortical dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:268950","SCTID:253153000","UMLS:C0431380","GARD:20982","MEDGEN:98129","NCIT:C42088","icd11.foundation:1352548261"],"synonyms":[{"name":"brain cortical dysplasia","type":"exact"},{"name":"cortical dysplasia","type":"exact"}],"termid":"MONDO:0017094","terms_by_termid":{"MONDO:0011818":null},"xrefs":{"Monarch":{"xref_id":"0017094"}}}


id: PBO:0081324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF114 antisense RNA 1","termid":"PBO:0081324"}


id: GO:0010434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a bract. This process pertains to the initial formation of a structure from unspecified parts. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence.","definition_xrefs":["PMID:16554366","PO:0009055","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ formation","termid":"GO:1905393"},{"relation_name":"part_of","term_name":"bract morphogenesis","termid":"GO:0010433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bract formation","termid":"GO:0010434"}


id: PBO:0039262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 7 family member A1 pseudogene 4","termid":"PBO:0039262"}


id: FYPO:0002868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of orotidine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular orotidine level","synonyms":[{"name":"increased cellular orotidine level during mitotic cell cycle","type":"related"},{"name":"increased cellular orotidine level during vegetative growth","type":"exact"},{"name":"increased orotidine accumulation","type":"related"}],"termid":"FYPO:0002868"}


id: PBO:0075333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbin and SH3 domain containing 2","termid":"PBO:0075333"}


id: GO:0141169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic cytosine DNA demethylation pathway that involves a DNA glycosylase that directly excises 5-methylcytosine (5-meC) to initiate its replacement with unmethylated cytosine through base excision repair. This pathway is known to occur in plants. In addition to CG sites, plants also methylate cytosines within CHH and CNG sequences.","definition_xrefs":["PMID:31546611","PMID:36478523","PMID:21862972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal 5-methylcytosine DNA demethylation pathway","termid":"GO:0141166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"chromosomal 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","synonyms":[{"name":"epigenetic 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","type":"related"}],"termid":"GO:0141169"}


id: GO:0061955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate or extent of actin depolymerization as part of the acrosome reaction. This allows the acrosomal membrane and plasma membrane to fuse.","definition_xrefs":["PMID:20937821"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament depolymerization involved in acrosome reaction (obsolete GO:0061955)","termid":"GO:0061955"}


id: GO:0103068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene C4 + a standard alpha amino acid = leukotriene D4 + an (gamma-L-glutamyl)-L-amino acid.","definition_xrefs":["PMID:9139674","PMID:1676842","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"leukotriene C4 gamma-glutamyl transferase activity","secondary_identifiers":["MetaCyc:RXN66-336","EC:2.3.2.2"],"termid":"GO:0103068"}


id: GO:0072227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric macula densa over time, from its formation to the mature structure. The metanephric macula densa is an area of specialized cells in the distal tubule of the metanephros that makes contact with the vascular pole of the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macula densa development","termid":"GO:0072024"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric juxtaglomerular apparatus development","termid":"GO:0072206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric macula densa development","termid":"GO:0072227"}


id: GO:0048612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the post-embryonic phase, whose specific outcome is the progression of the ectodermal gut over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal digestive tract development","termid":"GO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic ectodermal digestive tract development","synonyms":[{"name":"post-embryonic ectodermal gut development","type":"related"}],"termid":"GO:0048612"}


id: PBO:0053280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin-like receptor pseudogene 1","termid":"PBO:0053280"}


id: GO:0009897
data:
  {"annotated_genes":["SJAG_02435","SJAG_03204","SJAG_04875","SJAG_00784","SJAG_01835","SJAG_01290","SJAG_04789","SJAG_04850","SJAG_01029","SJAG_04209","SJAG_00096","SJAG_02093","SJAG_02173","SJAG_00254","SJAG_00340","SJAG_04685","SJAG_04851","SJAG_02260","SJAG_04238","SJAG_03640","SJAG_00109","SJAG_01086","SJAG_05272","SJAG_02916","SJAG_00310","SJAG_00415"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58679,65208,91765,91962,95912,96717,96729,96730,96731,97160,104157,104164,104165,105922,108504,115018,115731,116374,116474,116753,117605,118273,119350,119790,120366,120803],"is_not":false,"summary":null,"term":"GO:0009897"}]},"cv_name":"cellular_component","definition":"The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"cell surface","termid":"GO:0009986"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00415":null,"SJAG_00784":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_02093":null,"SJAG_02173":null,"SJAG_02260":null,"SJAG_02435":null,"SJAG_02916":null,"SJAG_03204":null,"SJAG_03640":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04685":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04875":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0009986"],"is_obsolete":false,"name":"external side of plasma membrane","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"external leaflet of plasma membrane","type":"exact"},{"name":"juxtamembrane","type":"broad"},{"name":"outer surface of cytoplasmic membrane","type":"exact"}],"termid":"GO:0009897","terms_by_termid":{"GO:0009897":null}}


id: PBO:0046629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 10","termid":"PBO:0046629"}


id: MONDO:0018735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Human MALT1 wild-type allele is located in the vicinity of 18q21 and is approximately 79 kb in length. This allele, which encodes mucosa associated lymphoid tissue lymphoma translocation gene 1 protein, plays a role in the modulation of the nuclear factor kappa B complex signaling cascade. The gene is involved in a chromosomal translocation t(11;18)(q21;q21) with the BIRC2 gene in mucosa-associated lymphoid tissue lymphomas.","definition_xrefs":["NCIT:C60672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"multifocal lymphangioendotheliomatosis-thrombocytopenia syndrome","secondary_identifiers":["MEDGEN:1804470","GARD:10467","UMLS:C5575322","Orphanet:464321"],"synonyms":[{"name":"DKFZp434L132","type":"exact"},{"name":"MALT1 wt allele","type":"exact"},{"name":"MLT","type":"exact"},{"name":"MLT1","type":"exact"},{"name":"cutaneovisceral angiomatosis-thrombocytopenia syndrome","type":"exact"},{"name":"mucosa associated lymphoid tissue lymphoma translocation Gene 1 wt allele","type":"exact"},{"name":"multifocal lymphangioendotheliomatosis with thrombocytopenia","type":"exact"}],"termid":"MONDO:0018735","xrefs":{"Monarch":{"xref_id":"0018735"}}}


id: GO:1990544
data:
  {"annotated_genes":["SJAG_00612","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59112,104777],"is_not":false,"summary":null,"term":"GO:1990544"}]},"cv_name":"biological_process","definition":"The process in which ATP is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:18485069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transport","termid":"GO:0015867"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"mitochondrial ATP transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:1990544","terms_by_termid":{"GO:1990544":null}}


id: GO:0004675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["RHEA:18673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"transmembrane receptor protein kinase activity","termid":"GO:0019199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0038023","GO:0016740","GO:0004672","GO:0003824","GO:0140096","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"transmembrane receptor protein serine/threonine kinase activity","secondary_identifiers":["Reactome:R-HSA-201476","MetaCyc:2.7.11.30-RXN","Reactome:R-HSA-198732","EC:2.7.11.30","Reactome:R-HSA-170868"],"synonyms":[{"name":"receptor protein serine/threonine kinase activity","type":"related"},{"name":"receptor serine/threonine protein kinase activity","type":"related"}],"termid":"GO:0004675"}


id: PBO:0081677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 598, E3 ubiquitin ligase","termid":"PBO:0081677"}


id: MONDO:1012121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypothyroidism, non-human animal","termid":"MONDO:1011678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypothyroidism, dog","secondary_identifiers":["OMIA:000538-9615"],"termid":"MONDO:1012121","xrefs":{"Monarch":{"xref_id":"1012121"}}}


id: PBO:0029942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut,_elongated_cell_during_cellular_response_to_hydroxyurea","termid":"PBO:0029942"}


id: PBO:0042949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3","termid":"PBO:0042949"}


id: PBO:0069445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 710, pseudogene","termid":"PBO:0069445"}


id: FYPO:0006164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to linear element","termid":"FYPO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to linear element","synonyms":[{"name":"decreased protein localisation to linear element","type":"exact"},{"name":"reduced protein localization to linear element","type":"exact"}],"termid":"FYPO:0006164"}


id: PBO:0041744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 antisense RNA 1","termid":"PBO:0041744"}


id: PATO:0000761
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting reduced activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"behavioural active","termid":"PATO:0001707"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased behavioural activity","synonyms":[{"name":"hypoactive","type":"exact"}],"termid":"PATO:0000761"}


id: GO:0043023
data:
  {"annotated_genes":["SJAG_03232","SJAG_03012","SJAG_01176","SJAG_01074","SJAG_04874","SJAG_00188","SJAG_03882"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62620,73183,75308,78408,78430,81291,90217],"is_not":false,"summary":null,"term":"GO:0043023"}]},"cv_name":"molecular_function","definition":"Binding to a large ribosomal subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome binding","termid":"GO:0043022"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_01074":null,"SJAG_01176":null,"SJAG_03012":null,"SJAG_03232":null,"SJAG_03882":null,"SJAG_04874":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ribosomal large subunit binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0043023","terms_by_termid":{"GO:0043023":null}}


id: GO:0070860
data:
  {"annotated_genes":["SJAG_00692","SJAG_02813","SJAG_00202"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77512,81052,81685],"is_not":false,"summary":null,"term":"GO:0070860"}]},"cv_name":"cellular_component","definition":"A RNA polymerase I-specific transcription factor complex that is required for the transcription of rDNA by RNA polymerase I. In yeast the complex consists of Rrn6p, Rrn7p, and Rrn11p.","definition_xrefs":["PMID:8702872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulator complex","termid":"GO:0000120"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00202":null,"SJAG_00692":null,"SJAG_02813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005730"],"is_obsolete":false,"name":"RNA polymerase I core factor complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070860","terms_by_termid":{"GO:0070860":null}}


id: PBO:0058731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6859-1","termid":"PBO:0058731"}


id: PBO:0084762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial mitophagy-specific protein; required primarily for mitophagy induced at post-log phase; not required for other types of selective autophagy or macroautophagy; conserved within fungi, but not in higher eukaryotes; ATG33 has a paralog, SCM4, that arose from the whole genome duplication","termid":"PBO:0084762"}


id: MONDO:0000130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypercarotenemia and vitamin a deficiency (obsolete MONDO:0000130)","termid":"MONDO:0000130","xrefs":{"Monarch":{"xref_id":"0000130"}}}


id: SO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the 3' UTR of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_3UTR_variant","secondary_identifiers":["http://annovar.openbioinformatics.org/en/latest/user-guide/gene/"],"synonyms":[{"name":"ANNOVAR:ncRNA_UTR3","type":"exact"},{"name":"incomplete transcript 3UTR variant","type":"related"}],"termid":"SO:0002076"}


id: MONDO:0006599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A distinct subgroup of the urticaria that are induced by an exogenous physical stimulus rather than occurring spontaneously.","definition_xrefs":["Wikipedia:Physical_urticaria"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"physical urticaria","secondary_identifiers":["SCTID:402601007","UMLS:C4551831","DOID:0060220","EFO:1000754","MEDGEN:1639813"],"termid":"MONDO:0006599","xrefs":{"Monarch":{"xref_id":"0006599"}}}


id: MONDO:0008429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Singleton-Merten dysplasia is characterized by dental dysplasia, progressive calcification of the thoracic aorta with stenosis, osteoporosis and expansion of the marrow cavities in hand bones. Additional features included generalized muscle weakness and atrophy, and chronic psoriasiform skin eruptions. It has been reported in four unrelated patients (male and female) and in a family with multiple affected members (male).","definition_xrefs":["Orphanet:85191"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Singleton-Merten dysplasia","secondary_identifiers":["SCTID:254114000","MESH:C537343","ICD9:733.29","NORD:1718","GARD:122","UMLS:C0432254","icd11.foundation:1084593684","MEDGEN:98481","OMIMPS:182250"],"synonyms":[{"name":"Merten-Singleton syndrome","type":"exact"},{"name":"SGMRT1","type":"related"},{"name":"SM syndrome","type":"related"},{"name":"Singleton Merten syndrome","type":"exact"},{"name":"Singleton-Merten syndrome","type":"exact"},{"name":"singleton Merten syndrome","type":"exact"},{"name":"syndrome of widened medullary cavities of the metacarpals and phalanges, aortic calcification and abnormal dentition","type":"related"},{"name":"widened medullary cavities of bone, aortic calcification, abnormal dentition, and muscular weakness","type":"related"}],"termid":"MONDO:0008429","xrefs":{"Monarch":{"xref_id":"0008429"}}}


id: PBO:0017586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, TPR lobe subcomplex subunit Cut9/Apc6","termid":"PBO:0017586"}


id: GO:0046568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NAD(P)+ = 3-methylbutanal + NAD(P)H + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["EC:1.1.1.265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase [NAD(P)+] activity","termid":"GO:0018455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-methylbutanal reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.1.1.265-RXN"],"synonyms":[{"name":"3-methylbutanal reductase [NAD(P)] activity","type":"related"},{"name":"3-methylbutanol:NAD(P) oxidoreductase activity","type":"exact"},{"name":"3-methylbutyraldehyde reductase activity","type":"exact"},{"name":"isoamyl alcohol oxidase activity","type":"exact"}],"termid":"GO:0046568"}


id: PBO:0027817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_arginine_catabolism_gene_mRNA_during_vegetative_growth","termid":"PBO:0027817"}


id: MONDO:0859517
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88407],"is_not":false,"summary":null,"term":"MONDO:0859517"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 2b, severe infantile, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1840936","UMLS:C5830300","DOID:0081339","OMIM:620265"],"termid":"MONDO:0859517","terms_by_termid":{"MONDO:0859517":null},"xrefs":{"Monarch":{"xref_id":"0859517"}}}


id: _global:translation_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is translation of Y if Y is translated by ribosome to create X.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation_of","termid":"_global:translation_of"}


id: GO:2000259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein activation cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein maturation","termid":"GO:1903319"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"positively_regulates","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of protein activation cascade","synonyms":[{"name":"positive regulation of protein activation pathway","type":"exact"},{"name":"positive regulation of protein activitory cascade","type":"exact"}],"termid":"GO:2000259"}


id: PR:C6Y4B8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22F3.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4B8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22F3.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.15","synonyms":[{"name":"Spom972h-SPAC22F3.15","type":"exact"}],"termid":"PR:C6Y4B8"}


id: GO:0032881
data:
  {"annotated_genes":["SJAG_04659","SJAG_04509","SJAG_04462","SJAG_00963","SJAG_01787","SJAG_02278","SJAG_04771","SJAG_03705","SJAG_00424","SJAG_01376","SJAG_01255","SJAG_04666","SJAG_04668","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78887,80829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[89341,94281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[89724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[69407,92617,94265,107284,107859,120054,119921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[104769,96819,91282,94287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving polysaccharides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_00963":null,"SJAG_01255":null,"SJAG_01376":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of polysaccharide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0032881","terms_by_termid":{"GO:0032951":null,"GO:0045719":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0077656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 8","termid":"PBO:0077656"}


id: PBO:0058189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4482","termid":"PBO:0058189"}


id: MONDO:0013119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the LOXHD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 77","secondary_identifiers":["UMLS:C2746083","GARD:22631","OMIM:613079","DOID:0110525","MEDGEN:412541","MESH:C567543"],"synonyms":[{"name":"DFNB77","type":"narrow"},{"name":"LOXHD1 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 77","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 77","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in LOXHD1","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 77","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 77","type":"exact"},{"name":"deafness, autosomal recessive 77","type":"narrow"},{"name":"deafness, autosomal recessive type 77","type":"narrow"}],"termid":"MONDO:0013119","xrefs":{"Monarch":{"xref_id":"0013119"}}}


id: GO:0071744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgE immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgE isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgE immunoglobulin complex","termid":"GO:0071742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"IgE B cell receptor complex","synonyms":[{"name":"membrane-bound IgE","type":"exact"},{"name":"surface IgE","type":"exact"}],"termid":"GO:0071744"}


id: GO:0019407
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hexitols, any alditol with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"},{"relation_name":"is_a","term_name":"alditol catabolic process","termid":"GO:0019405"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"hexitol catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"hexitol breakdown","type":"exact"},{"name":"hexitol catabolism","type":"exact"},{"name":"hexitol degradation","type":"exact"}],"termid":"GO:0019407","terms_by_termid":{"GO:0006062":null}}


id: GO:1904702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GO_REF:0000058","GOC:aruk","GOC:kmv","GOC:bc","GOC:TermGenie","PMID:26412237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell-cell junction","termid":"GO:0150106"},{"relation_name":"regulates","term_name":"protein localization to adherens junction","termid":"GO:0071896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to adherens junction","synonyms":[{"name":"regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"regulation of protein localization in cell-cell adherens junction","type":"exact"}],"termid":"GO:1904702"}


id: PBO:0054820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2233","termid":"PBO:0054820"}


id: GO:0034512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a box C/D small nucleolar RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA binding","termid":"GO:0030515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"box C/D sno(s)RNA binding","synonyms":[{"name":"box C/D sRNA binding","type":"narrow"},{"name":"box C/D snoRNA binding","type":"narrow"}],"termid":"GO:0034512"}


id: MONDO:0030992
data:
  {"annotated_genes":["SJAG_04161"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87404],"is_not":false,"summary":null,"term":"MONDO:0030992"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04161":null},"genotype_count":0,"is_obsolete":false,"name":"short stature, oligodontia, dysmorphic facies, and motor delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543206","MEDGEN:1787876","OMIM:619234"],"synonyms":[{"name":"SOFM","type":"exact"}],"termid":"MONDO:0030992","terms_by_termid":{"MONDO:0030992":null},"xrefs":{"Monarch":{"xref_id":"0030992"}}}


id: GO:0004764
data:
  {"annotated_genes":["SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60352],"is_not":false,"summary":null,"term":"GO:0004764"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate + NADP+ = 3-dehydroshikimate + NADPH + H+.","definition_xrefs":["EC:1.1.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00337":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"shikimate 3-dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["RHEA:17737","KEGG_REACTION:R02413","MetaCyc:SHIKIMATE-5-DEHYDROGENASE-RXN"],"synonyms":[{"name":"5-dehydroshikimate reductase activity","type":"related"},{"name":"5-dehydroshikimic reductase activity","type":"related"},{"name":"DHS reductase activity","type":"broad"},{"name":"dehydroshikimic reductase activity","type":"broad"},{"name":"shikimate oxidoreductase activity","type":"broad"},{"name":"shikimate:NADP(+) 5-oxidoreductase activity","type":"related"},{"name":"shikimate:NADP(+) oxidoreductase activity","type":"broad"}],"termid":"GO:0004764","terms_by_termid":{"GO:0004764":null}}


id: PBO:0066700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of mitochondrial RNA processing endoribonuclease","termid":"PBO:0066700"}


id: PBO:0083223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified ORF MDM31/YHR194W","termid":"PBO:0083223"}


id: PBO:0038405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within,_positive_effect","termid":"PBO:0038405"}


id: PBO:0058827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8057","termid":"PBO:0058827"}


id: MONDO:0015154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rickettsial disease (obsolete MONDO:0015154)","termid":"MONDO:0015154","xrefs":{"Monarch":{"xref_id":"0015154"}}}


id: GO:0031815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y5 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"P2Y5 nucleotide receptor binding","synonyms":[{"name":"P2Y5 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031815"}


id: PBO:0069879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1167, pseudogene","termid":"PBO:0069879"}


id: PBO:0060992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHERF family PDZ scaffold protein 4","termid":"PBO:0060992"}


id: PBO:0003836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR36","termid":"PBO:0003836"}


id: MONDO:0014388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial median cleft of the upper and lower lips is a rare and isolated orofacial defect characterized by incomplete median clefts of both the lower lip (limited to the vermilion, with no muscle involvement) and upper lip (with muscle involvement), double labial frenulum and fusion of the upper gingival and upper labial mucosa (resulting in a shallow upper vestibular fold), in addition to poor dental alignment, and increased interdental distance between the lower and upper median incisors. Variable expressivity has been reported in an affected family.","definition_xrefs":["Orphanet:401942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial median cleft of the upper and lower lips","secondary_identifiers":["DOID:0080407","MEDGEN:863033","UMLS:C4014596","OMIM:615892","GARD:17663"],"synonyms":[{"name":"OFC14","type":"related"},{"name":"orofacial cleft 14","type":"related"}],"termid":"MONDO:0014388","xrefs":{"Monarch":{"xref_id":"0014388"}}}


id: PBO:0058706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6834","termid":"PBO:0058706"}


id: PBO:0012521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_product_of","termid":"PBO:0012521"}


id: PATO:0001981
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a shape resembling an ear.","direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auriculate","termid":"PATO:0001981"}


id: GO:0140720
data:
  {"annotated_genes":["SJAG_03844","SJAG_02119","SJAG_03543","SJAG_02401","SJAG_00756","SJAG_03685","SJAG_01046","SJAG_03916","SJAG_03356","SJAG_03997","SJAG_00302","SJAG_01540","SJAG_02778","SJAG_01601","SJAG_03042","SJAG_03982","SJAG_03418","SJAG_01579","SJAG_03680","SJAG_03664","SJAG_00678","SJAG_02621","SJAG_03945","SJAG_04574","SJAG_04186","SJAG_00335"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61240,64596,92769,93123,93929,95693,95941,98042,98620,101013,101460,106012,106111,112457,114089,114193,114598,114599,115280,115981,117943,119133,119706,119764,120110,120846],"is_not":false,"summary":null,"term":"GO:0140720"}]},"cv_name":"cellular_component","definition":"Heterochromatin that is located adjacent to the telomere, and characterized by methylated H3 histone at lysine 9 (H3K9me2/H3K9me3).","definition_xrefs":["PMID:34576871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"},{"relation_name":"part_of","term_name":"chromosome, subtelomeric region","termid":"GO:0099115"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_00756":null,"SJAG_01046":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02401":null,"SJAG_02621":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03543":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04186":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"subtelomeric heterochromatin","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0140720","terms_by_termid":{"GO:0140720":null}}


id: PBO:0080117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucuronate decarboxylase 1","termid":"PBO:0080117"}


id: PBO:0053331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 163","termid":"PBO:0053331"}


id: PR:P0CT35
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-2 gene.","definition_xrefs":["UniProtKB:P0CT35","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-2 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.08","synonyms":[{"name":"Spom972h-Tf2-2","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT35"}


id: PR:Q9UTK0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein NOB1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12814:SF0","OMA:SCHPO01341","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S-pre-rRNA D-site endonuclease nob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.09","secondary_identifiers":["UniProtKB:Q9UTK0"],"synonyms":[{"name":"Spom972h-NOB1","type":"exact"},{"name":"pre-rRNA-processing endonuclease nob1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTK0"}


id: MONDO:0019134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central neurocytoma is a very rare brain tumor of young adults (over 100 cases reported worldwide). It is typically found in the lateral ventricles and occasionally in the third ventricle. Symptoms are those of increased intracranial pressure: headache, nausea and vomiting, drowsiness, vision problems and mental changes. Total removal of the tumor is the therapy of choice. Post-operative prognosis is generally good.","definition_xrefs":["Orphanet:73256"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central neurocytoma","secondary_identifiers":["MESH:D018306","ONCOTREE:CNC","UMLS:C0206719","icd11.foundation:2039766091","NCIT:C3791","DOID:14174","MEDGEN:104924","GARD:10641","icd11.foundation:1247650801","ICDO:9506/1"],"synonyms":[{"name":"CNC","type":"related"},{"name":"Neurolipocytoma","type":"exact"},{"name":"central neurocytoma (WHO grade II)","type":"exact"}],"termid":"MONDO:0019134","xrefs":{"Monarch":{"xref_id":"0019134"}}}


id: PBO:0086779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YDR524C-B has a paralog, YCL048W-A, that arose from the whole genome duplication","termid":"PBO:0086779"}


id: PBO:0062509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily I member 1 pseudogene","termid":"PBO:0062509"}


id: MONDO:0000698
data:
  {"annotated_genes":["SJAG_03434","SJAG_00674","SJAG_03293"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013166"},{"annotations":[87029,87030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010083"}]},"cv_name":"mondo","definition":"An amino acid metabolic disorder characterized by impairment of the GABA catabolic pathway.","definition_xrefs":["DOID:0060176","PMID:12891648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"gamma-amino butyric acid metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4702813","GARD:18955","MEDGEN:1842586","icd11.foundation:1811657969","Orphanet:79175"],"termid":"MONDO:0000698","terms_by_termid":{"MONDO:0010083":null,"MONDO:0013166":null},"xrefs":{"Monarch":{"xref_id":"0000698"}}}


id: PBO:0050114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 24","termid":"PBO:0050114"}


id: PBO:0076154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SURP and G-patch domain containing 2","termid":"PBO:0076154"}


id: PBO:0002166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BolA domain protein","termid":"PBO:0002166"}


id: MONDO:0019441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare hereditary Transthyretin (TTR)-related systemic amyloidosis (ATTR) with predominant cardiac involvement resulting from myocardial infiltration of abnormal amyloid protein.","definition_xrefs":["Orphanet:85451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"},{"relation_name":"is_a","term_name":"amyloidosis, hereditary systemic 1","termid":"MONDO:0971004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005267","MONDO:0021179","MONDO:0005244"],"is_obsolete":false,"name":"ATTRV122I amyloidosis","secondary_identifiers":["SCTID:715655000","ICD10EXP:E85.4+","MEDGEN:907865","GARD:16755","icd11.foundation:1449168185","ICD10EXP:I43.1*","UMLS:C4275067"],"synonyms":[{"name":"ATTRV122I-related amyloidosis","type":"exact"}],"termid":"MONDO:0019441","xrefs":{"Monarch":{"xref_id":"0019441"}}}


id: PBO:0030416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_duplication","termid":"PBO:0030416"}


id: PBO:0088506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, RING-type, Rad16-like","termid":"PBO:0088506"}


id: PBO:0052751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 43","termid":"PBO:0052751"}


id: GO:1905001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane repolarization during atrial cardiac muscle cell action potential.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","PMID:21098446","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane repolarization during atrial cardiac muscle cell action potential","termid":"GO:1905000"},{"relation_name":"is_a","term_name":"negative regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905032"},{"relation_name":"negatively_regulates","term_name":"membrane repolarization during atrial cardiac muscle cell action potential","termid":"GO:0098914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane repolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"down regulation of atrial repolarization","type":"related"},{"name":"down regulation of electrocardiogram QRS complex","type":"related"},{"name":"down regulation of membrane repolarization during atrial cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of atrial repolarization","type":"related"},{"name":"down-regulation of electrocardiogram QRS complex","type":"related"},{"name":"down-regulation of membrane repolarization during atrial cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of atrial repolarization","type":"related"},{"name":"downregulation of electrocardiogram QRS complex","type":"related"},{"name":"downregulation of membrane repolarization during atrial cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of atrial repolarization","type":"related"},{"name":"inhibition of electrocardiogram QRS complex","type":"related"},{"name":"inhibition of membrane repolarization during atrial cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of atrial repolarization","type":"related"},{"name":"negative regulation of electrocardiogram QRS complex","type":"related"}],"termid":"GO:1905001"}


id: GO:0140990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in converting precursor piRNAs into non-overlapping, contiguous primary piRNAs (approximately 24-30-nt piRNAs with a preference for a 5' uridine (U) via the endonucleolytic activity of cytosolic PIWI. This may include pre-piRNA maturation of 3' ends by trimming and 2'-O-methylation.","definition_xrefs":["PMID:34469728","PMID:22907665","PMID:26166577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA processing","termid":"GO:0034587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"primary piRNA processing","termid":"GO:0140990"}


id: PBO:0053671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 852","termid":"PBO:0053671"}


id: GO:1901518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aspyridone A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"},{"relation_name":"is_a","term_name":"aspyridone A metabolic process","termid":"GO:1901516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"aspyridone A biosynthetic process","synonyms":[{"name":"aspyridone A anabolism","type":"exact"},{"name":"aspyridone A biosynthesis","type":"exact"},{"name":"aspyridone A formation","type":"exact"},{"name":"aspyridone A synthesis","type":"exact"}],"termid":"GO:1901518"}


id: PR:O60083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfb6 gene.","definition_xrefs":["UniProtKB:O60083","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1494.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.09c","synonyms":[{"name":"Spom972h-tfb6","type":"exact"}],"termid":"PR:O60083"}


id: PBO:0040805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betaine--homocysteine S-methyltransferase","termid":"PBO:0040805"}


id: GO:0098663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any transmembrane transporter activity that is involved in importing some substance into a cell.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane transporter activity involved in import into cell (obsolete GO:0098663)","termid":"GO:0098663"}


id: MONDO:0002385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign encapsulated neoplasm of the kidney, characterized by the presence of cysts separated by septa. There are no solid areas present. The septa are lined by one layer of epithelial cells that have eosinophilic or clear cytoplasm. The cystic spaces contain serous or hemorrhagic fluid.","definition_xrefs":["NCIT:C7504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"benign cystic nephroma","secondary_identifiers":["ICDO:8959/0","DOID:2673","MEDGEN:220422","UMLS:C1266138"],"synonyms":[{"name":"benign cystic nephroma","type":"exact"},{"name":"benign multilocular cystic nephroma","type":"exact"},{"name":"cystic nephroma","type":"exact"}],"termid":"MONDO:0002385","xrefs":{"Monarch":{"xref_id":"0002385"}}}


id: GO:0030195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of blood coagulation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"negative regulation of coagulation","termid":"GO:0050819"},{"relation_name":"is_a","term_name":"negative regulation of wound healing","termid":"GO:0061045"},{"relation_name":"is_a","term_name":"negative regulation of hemostasis","termid":"GO:1900047"},{"relation_name":"negatively_regulates","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood coagulation","synonyms":[{"name":"down regulation of blood coagulation","type":"exact"},{"name":"down-regulation of blood coagulation","type":"exact"},{"name":"downregulation of blood coagulation","type":"exact"},{"name":"inhibition of blood coagulation","type":"narrow"}],"termid":"GO:0030195"}


id: RO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a motor neuron and a muscle that it synapses to via a type III bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_to","termid":"RO:0002120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_via_type_III_bouton_to","termid":"RO:0002114"}


id: MONDO:0004365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A uveal melanoma characterized by the presence of tumor cell necrosis.","definition_xrefs":["NCIT:C7990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveal melanoma","termid":"MONDO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"necrotic uveal melanoma","secondary_identifiers":["MEDGEN:1669717","UMLS:C0279695","DOID:7808"],"termid":"MONDO:0004365","xrefs":{"Monarch":{"xref_id":"0004365"}}}


id: PR:O74363
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sqs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch and R3H domain-containing protein C30B4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.02c","synonyms":[{"name":"Spom972h-sqs1","type":"exact"}],"termid":"PR:O74363"}


id: PBO:0067649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 824, pseudogene","termid":"PBO:0067649"}


id: PBO:0072095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 26","termid":"PBO:0072095"}


id: FYECO:0000169
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethanolamine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited ethanolamine","termid":"FYECO:0000169"}


id: GO:0106041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of GABA-A receptor activity (obsolete GO:0106041)","termid":"GO:0106041"}


id: PBO:0050046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, H (pseudogene)","termid":"PBO:0050046"}


id: PBO:0056150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MET transcriptional regulator MACC1","termid":"PBO:0056150"}


id: MONDO:0006335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endometrioid adenocarcinoma arising from the ovary. It comprises 10% to 25% of all primary ovarian carcinomas. Grossly, endometrioid carcinoma may present as a cystic or solid mass. Microscopically, the tumor greatly resembles the appearance of the ordinary type of endometrial adenocarcinoma. As a group, endometrioid carcinoma has a prognosis twice as good as that of serous or mucinous carcinoma.","definition_xrefs":["NCIT:C7979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"ovarian endometrial cancer","termid":"MONDO:0003812"},{"relation_name":"is_a","term_name":"endometrioid adenocarcinoma","termid":"MONDO:0005026"},{"relation_name":"is_a","term_name":"endometrium adenocarcinoma","termid":"MONDO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian endometrioid adenocarcinoma","secondary_identifiers":["Orphanet:454723","DOID:5828","MEDGEN:91087","EFO:1000416","ONCOTREE:EOV","SCTID:254852002","GARD:21893","UMLS:C0346163"],"synonyms":[{"name":"endometrioid adenocarcinoma of ovary","type":"exact"},{"name":"endometrioid adenocarcinoma of the ovary","type":"exact"},{"name":"endometrioid cancer of ovary","type":"exact"},{"name":"endometrioid cancer of the ovary","type":"exact"},{"name":"endometrioid carcinoma of ovary","type":"exact"},{"name":"endometrioid carcinoma of the ovary","type":"exact"},{"name":"endometrioid carcinoma ovary","type":"exact"},{"name":"endometrioid ovarian cancer","type":"related"},{"name":"endometrioid ovary carcinoma","type":"exact"},{"name":"endometrium adenocarcinoma of ovary","type":"exact"},{"name":"ovarian endometrioid adenocarcinoma","type":"exact"},{"name":"ovarian endometrioid cancer","type":"exact"},{"name":"ovarian endometrioid carcinoma","type":"exact"},{"name":"ovary endometrium adenocarcinoma","type":"exact"}],"termid":"MONDO:0006335","xrefs":{"Monarch":{"xref_id":"0006335"}}}


id: MONDO:0015179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intestinal disease due to vitamin absorption anomaly (obsolete MONDO:0015179)","secondary_identifiers":["Orphanet:104004"],"termid":"MONDO:0015179","xrefs":{"Monarch":{"xref_id":"0015179"}}}


id: PBO:0002568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Aspartic acid","termid":"PBO:0002568"}


id: PBO:0041926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 1 pseudogene 1","termid":"PBO:0041926"}


id: FYPO:0005629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein having high molecular mass due to polySUMO conjugation is greater than normal.","definition_xrefs":["PomBase:mah","PMID:26221037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular HMW SUMO conjugate level","synonyms":[{"name":"accumulation of HMW SUMO conjugates","type":"exact"},{"name":"accumulation of high molecular mass SUMO conjugates","type":"exact"},{"name":"accumulation of high molecular weight SUMO conjugates","type":"exact"},{"name":"increased HMW SUMO conjugate accumulation","type":"related"},{"name":"increased cellular HMW SUMO conjugate level during mitotic cell cycle","type":"related"},{"name":"increased cellular HMW SUMO conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular mass SUMO conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular weight SUMO conjugate level during vegetative growth","type":"exact"}],"termid":"FYPO:0005629"}


id: PBO:0046513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERICH6 antisense RNA 1","termid":"PBO:0046513"}


id: PBO:0039211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C2","termid":"PBO:0039211"}


id: MONDO:0018090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Double-outlet left ventricle (DOLV) is an extremely rare congenital cardiac malformation in which both the aorta and the pulmonary artery arise, either exclusively or predominantly, from the morphologic left ventricle.","definition_xrefs":["Orphanet:3427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conotruncal heart malformations","termid":"MONDO:0016581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double outlet left ventricle","secondary_identifiers":["GARD:1907","ICD9:745.19","NANDO:2100077","UMLS:C0265809","HP:0011581","icd11.foundation:2094997989","MEDGEN:120558","SCTID:7368005","NANDO:2200257"],"synonyms":[{"name":"DOLV","type":"exact"},{"name":"Double outlet left ventricle","type":"exact"},{"name":"double outlet left ventricle (disease)","type":"exact"}],"termid":"MONDO:0018090","xrefs":{"Monarch":{"xref_id":"0018090"}}}


id: GO:0051472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucosylglycerol metabolic process","synonyms":[{"name":"glucosylglycerol metabolism","type":"exact"}],"termid":"GO:0051472"}


id: MOD:00490
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDT-iodo-PEO-biotin","synonyms":[{"name":"EDT-iodo-PEO-biotin","type":"related"},{"name":"EDT-iodoacetyl-PEO-biotin","type":"related"}],"termid":"MOD:00490"}


id: SO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 57 to 71 nucleotide RNA that is a component of the U7 small nuclear ribonucleoprotein complex (U7 snRNP). The U7 snRNP is required for histone pre-mRNA processing.","definition_xrefs":["PMID:15526162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U7_snRNA","synonyms":[{"name":"U7 small nuclear RNA","type":"exact"},{"name":"U7 snRNA","type":"exact"},{"name":"small nuclear RNA U7","type":"exact"},{"name":"snRNA U7","type":"exact"}],"termid":"SO:0002338"}


id: FYPO:0003358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to miconazole. Cells stop growing (and may die) at a concentration of miconazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to miconazole","synonyms":[{"name":"hypersensitive to miconazole","type":"exact"},{"name":"sensitive to miconazole during mitotic cell cycle","type":"related"},{"name":"sensitive to miconazole during vegetative growth","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids","type":"broad"}],"termid":"FYPO:0003358"}


id: MONDO:0005708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A febrile illness characterized by chills, aches, vomiting, leukopenia, and sometimes encephalitis. It is caused by the colorado tick fever virus, a reovirus transmitted by the tick Dermacentor andersoni.","definition_xrefs":["MESH:D003121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Colorado tick fever","secondary_identifiers":["ICD10CM:A93.2","icd11.foundation:951357413","UMLS:C0009400","ICD9:066.1","Orphanet:83595","DOID:4885","GARD:19042","NORD:989","MedDRA:10010022","MEDGEN:40398","SCTID:6452009"],"synonyms":[{"name":"American mountain fever","type":"exact"},{"name":"Colorado tick encephalitis","type":"exact"},{"name":"Colorado tick fever virus caused disease or disorder","type":"exact"},{"name":"Colorado tick fever virus disease or disorder","type":"exact"},{"name":"Colorado tick fever virus infectious disease","type":"exact"},{"name":"Colorado tick-borne disease","type":"exact"},{"name":"Mountain fever","type":"exact"},{"name":"Mountain tick fever","type":"exact"},{"name":"Tick fever, American mountain","type":"exact"}],"termid":"MONDO:0005708","xrefs":{"Monarch":{"xref_id":"0005708"}}}


id: SO:1000126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that affects the secondary structure (folding) of the RNA transcript molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000126 sequence_variant_affecting_transcript_secondary_structure (obsolete SO:1000126)","synonyms":[{"name":"mutation affecting transcript secondary structure","type":"related"},{"name":"sequence variant affecting transcript secondary structure","type":"exact"}],"termid":"SO:1000126"}


id: PBO:0074309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD1 antisense RNA 2","termid":"PBO:0074309"}


id: PBO:0077546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 256","termid":"PBO:0077546"}


id: GO:2001020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of response to DNA damage stimulus.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of response to DNA damage stimulus (obsolete GO:2001020)","synonyms":[{"name":"regulation of DNA damage response","type":"exact"},{"name":"regulation of cellular DNA damage response","type":"exact"},{"name":"regulation of cellular response to DNA damage stimulus","type":"exact"},{"name":"regulation of response to genotoxic stress","type":"exact"}],"termid":"GO:2001020"}


id: GO:0015859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"intracellular nucleoside transport","termid":"GO:0015859"}


id: PR:Q9USH7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psy1 gene.","definition_xrefs":["UniProtKB:Q9USH7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin-like protein psy1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.03c","synonyms":[{"name":"Spom972h-psy1","type":"exact"}],"termid":"PR:Q9USH7"}


id: PBO:0052068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT7 pseudogene 1","termid":"PBO:0052068"}


id: FYPO:0005540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of telomerase RNA reverse transcriptase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal telomerase RNA reverse transcriptase activity","termid":"FYPO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased telomerase RNA reverse transcriptase activity","synonyms":[{"name":"decreased telomerase activity","type":"broad"},{"name":"reduced telomerase RNA reverse transcriptase activity","type":"exact"}],"termid":"FYPO:0005540"}


id: PBO:0113140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor-like protein; involved in negatively regulating TORC1 activity; green fluorescent protein (GFP)-fusion protein localizes to the vacuole","termid":"PBO:0113140"}


id: PR:Q9P802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein mis18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.12","synonyms":[{"name":"Spom972h-mis18","type":"exact"}],"termid":"PR:Q9P802"}


id: PBO:0059547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Asn (AAU/C)","termid":"PBO:0059547"}


id: GO:0004242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-mitochondrial processing peptidase (obsolete GO:0004242)","synonyms":[{"name":"beta-MPP","type":"exact"},{"name":"beta-mitochondrial processing peptidase","type":"exact"}],"termid":"GO:0004242"}


id: PBO:0075192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 4","termid":"PBO:0075192"}


id: PBO:0088438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam13/Mug147, tandem fusion","termid":"PBO:0088438"}


id: GO:1902900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a gut granule.","definition_xrefs":["PMID:17202409","GOC:TermGenie","GOC:kmv","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"gut granule assembly","synonyms":[{"name":"gut granule biogenesis","type":"exact"},{"name":"gut granule formation","type":"exact"}],"termid":"GO:1902900"}


id: GO:0015813
data:
  {"annotated_genes":["SJAG_03256","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98453],"is_not":false,"summary":null,"term":"GO:0015813"},{"annotations":[105755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate import","termid":"GO:0051938"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-glutamate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0089711"],"synonyms":[{"name":"L-glutamate transport","type":"broad"},{"name":"mitochondrial aspartate/glutamate transport","type":"related"}],"termid":"GO:0015813","terms_by_termid":{"GO:0015813":null,"GO:0090515":null}}


id: PBO:0050798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 6","termid":"PBO:0050798"}


id: PBO:0116222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, UPF0047 family, implicated in thiamine or TPP metabolism","termid":"PBO:0116222"}


id: GO:0032452
data:
  {"annotated_genes":["SJAG_03635","SJAG_02401","SJAG_03664","SJAG_03997","SJAG_03286","SJAG_03041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73809],"is_not":true,"summary":null,"term":"GO:0032452"},{"annotations":[89216,72183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[68277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[76730,71880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[119770,72180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[95950,61241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a histone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein demethylase activity","termid":"GO:0140457"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone demethylase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-4722133","Reactome:R-HSA-4724284","Reactome:R-HSA-5661116","Reactome:R-HSA-5423117","Reactome:R-HSA-5661123","Reactome:R-HSA-5625870","Reactome:R-HSA-5661124","Reactome:R-HSA-4754181","Reactome:R-HSA-4754187","Reactome:R-HSA-5625797","Reactome:R-HSA-5625848","Reactome:R-HSA-5661115","Reactome:R-HSA-5661121","Reactome:R-HSA-5661120","Reactome:R-HSA-4754176","Reactome:R-HSA-4724279","Reactome:R-HSA-5661122","Reactome:R-HSA-3214912","Reactome:R-HSA-5661114","Reactome:R-HSA-5661125"],"termid":"GO:0032452","terms_by_termid":{"GO:0032452":null,"GO:0032454":null,"GO:0034647":null,"GO:0051864":null,"GO:0140680":null,"GO:0140683":null}}


id: PBO:0048875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member A","termid":"PBO:0048875"}


id: MONDO:0012451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eosinophilic esophagitis","termid":"MONDO:0005361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophagitis, eosinophilic, 1","secondary_identifiers":["OMIM:610247","UMLS:C4551589","MEDGEN:1634032"],"synonyms":[{"name":"EOE1","type":"exact"},{"name":"esophagitis, eosinophilic","type":"related"},{"name":"esophagitis, eosinophilic, 1","type":"exact"}],"termid":"MONDO:0012451","xrefs":{"Monarch":{"xref_id":"0012451"}}}


id: PBO:0056265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like transcriptional coactivator 1","termid":"PBO:0056265"}


id: PBO:0040208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL transcriptional regulator 1","termid":"PBO:0040208"}


id: PBO:0040679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR3 antisense RNA 1","termid":"PBO:0040679"}


id: MOD:01171
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-acetyl-L-threonine.","definition_xrefs":["PubMed:16728640","Unimod:1#T","RESID:AA0423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetylated residue","termid":"MOD:00644"},{"relation_name":"is_a","term_name":"acetylated L-threonine","termid":"MOD:01186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyl-L-threonine","synonyms":[{"name":"(2S,3R)-3-(acetyloxy)-2-aminobutanoic acid","type":"exact"},{"name":"ACT_SITE O-acetylthreonine intermediate","type":"exact"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES O-acetylthreonine","type":"exact"},{"name":"O-acetyl-L-threonine","type":"exact"},{"name":"O-acetylthreonine","type":"exact"},{"name":"OAcThr","type":"exact"},{"name":"threonine acetate ester","type":"exact"}],"termid":"MOD:01171"}


id: MOD:00710
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds a proton and replaces two hydrogen atoms with two methyl groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"protonated-dimethylated residue","synonyms":[{"name":"Me2+Res","type":"exact"}],"termid":"MOD:00710"}


id: FYPO:0002264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of one or more polysaccharides released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"increased concentration of polysaccharide in growth medium","synonyms":[{"name":"increased concentration of polysaccharides in growth medium","type":"exact"},{"name":"increased level of polysaccharide in growth medium","type":"exact"},{"name":"increased release of polysaccharide into growth medium","type":"related"}],"termid":"FYPO:0002264"}


id: PBO:0083154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF SSZ1/YHR064C","termid":"PBO:0083154"}


id: GO:0005960
data:
  {"annotated_genes":["SJAG_03641","SJAG_03861","SJAG_03290","SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57895,75952,79845,89243],"is_not":false,"summary":null,"term":"GO:0005960"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the reversible oxidation of glycine. In E. coli, it has four components: dihydrolipoamide dehydrogenase, glycine dehydrogenase (decarboxylating), lipoyl-GcvH-protein and aminomethyltransferase, also known as L, P, H, and T.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glycine cleavage complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005961","GO:0070015","Wikipedia:Glycine_decarboxylase_complex"],"synonyms":[{"name":"glycine cleavage system","type":"exact"},{"name":"glycine decarboxylase complex","type":"exact"},{"name":"glycine dehydrogenase (decarboxylating) complex","type":"exact"},{"name":"glycine dehydrogenase complex (decarboxylating)","type":"related"},{"name":"glycine synthase complex","type":"exact"}],"termid":"GO:0005960","terms_by_termid":{"GO:0005960":null}}


id: PBO:0063423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4B antisense RNA 1","termid":"PBO:0063423"}


id: PBO:0064798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase","termid":"PBO:0064798"}


id: GO:0140409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA alternative polyadenylation.","definition_xrefs":["PMID:29507755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA 3'-end processing","termid":"GO:0031442"},{"relation_name":"is_a","term_name":"regulation of mRNA alternative polyadenylation","termid":"GO:0140408"},{"relation_name":"positively_regulates","term_name":"mRNA alternative polyadenylation","termid":"GO:0110104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"positive regulation of mRNA alternative polyadenylation","termid":"GO:0140409"}


id: GO:1905604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases blood-brain barrier permeability, the quality of the blood-brain barrier that allows for a controlled passage of substances (e.g. macromolecules, small molecules, ions) into and out of the brain.","definition_xrefs":["GO_REF:0000058","GOC:aruk","GOC:TermGenie","PMID:30280653","GOC:als","GOC:bc","PMID:22524708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vascular permeability","termid":"GO:0043116"},{"relation_name":"is_a","term_name":"regulation of blood-brain barrier permeability","termid":"GO:1905603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood-brain barrier permeability","synonyms":[{"name":"down-regulation of BBB permeability","type":"exact"},{"name":"down-regulation of blood-brain barrier permeability","type":"exact"},{"name":"down-regulation of blood/brain barrier permeability","type":"exact"},{"name":"downregulation of BBB permeability","type":"exact"},{"name":"downregulation of blood-brain barrier permeability","type":"exact"},{"name":"downregulation of blood/brain barrier permeability","type":"exact"},{"name":"inhibition of maintenance of permeability of BBB","type":"narrow"},{"name":"inhibition of maintenance of permeability of blood-brain barrier","type":"narrow"},{"name":"negative regulation of BBB permeability","type":"exact"},{"name":"negative regulation of blood/brain barrier permeability","type":"exact"}],"termid":"GO:1905604"}


id: PBO:0084462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway; functionally redundant with Ssk2p; interacts with and is activated by Ssk1p; phosphorylates Pbs2p; SSK22 has a paralog, SSK2, that arose from the whole genome duplication","termid":"PBO:0084462"}


id: GO:0016866
data:
  {"annotated_genes":["SJAG_03723","SJAG_02783","SJAG_02009","SJAG_02978","SJAG_00319","SJAG_00978","SJAG_01172","SJAG_00088","SJAG_00134","SJAG_04754","SJAG_01209","SJAG_03360","SJAG_00624","SJAG_03572","SJAG_00518","SJAG_04065"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67802],"is_not":false,"summary":null,"term":"GO:0016866"},{"annotations":[76748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004106"},{"annotations":[75740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000250"},{"annotations":[72756,73703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004610"},{"annotations":[78387,117844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004614"},{"annotations":[74208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004619"},{"annotations":[81009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004615"},{"annotations":[75213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008973"},{"annotations":[77303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009982"},{"annotations":[116298,97241,108177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106032"},{"annotations":[96538,114477,116299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106029"},{"annotations":[108178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160150"},{"annotations":[104413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160148"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a functional group from one position to another within a single molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00134":null,"SJAG_00319":null,"SJAG_00518":null,"SJAG_00624":null,"SJAG_00978":null,"SJAG_01172":null,"SJAG_01209":null,"SJAG_02009":null,"SJAG_02783":null,"SJAG_02978":null,"SJAG_03360":null,"SJAG_03572":null,"SJAG_03723":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"intramolecular transferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:5.4.-.-"],"synonyms":[{"name":"intramolecular transferase activity, transferring other groups","type":"narrow"},{"name":"mutase activity","type":"exact"}],"termid":"GO:0016866","terms_by_termid":{"GO:0000250":null,"GO:0004106":null,"GO:0004610":null,"GO:0004614":null,"GO:0004615":null,"GO:0004619":null,"GO:0008973":null,"GO:0009982":null,"GO:0016866":null,"GO:0106029":null,"GO:0106032":null,"GO:0160148":null,"GO:0160150":null}}


id: PBO:0058221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4511","termid":"PBO:0058221"}


id: PBO:0087656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HIR complex; HIR is a nucleosome assembly complex involved in regulation of histone gene transcription; contributes to nucleosome formation, heterochromatic gene silencing, and formation of functional kinetochores","termid":"PBO:0087656"}


id: MONDO:0002226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urogenital tuberculosis involving a pathogenic inflammatory response in the ovary.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"},{"relation_name":"is_a","term_name":"oophoritis","termid":"MONDO:0006877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous oophoritis","secondary_identifiers":["SCTID:84194006","UMLS:C0275932","DOID:2148","icd11.foundation:1634640694","ICD9:016.60","ICD9:016.6","MEDGEN:546959"],"termid":"MONDO:0002226","xrefs":{"Monarch":{"xref_id":"0002226"}}}


id: PBO:0051293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-16","termid":"PBO:0051293"}


id: PBO:0073266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 10","termid":"PBO:0073266"}


id: GO:0032805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle receptor catabolic process","termid":"GO:0032803"},{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"positive regulation of receptor catabolic process","termid":"GO:2000646"},{"relation_name":"positively_regulates","term_name":"low-density lipoprotein particle receptor catabolic process","termid":"GO:0032802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein particle receptor catabolic process","synonyms":[{"name":"activation of low-density lipoprotein receptor catabolic process","type":"narrow"},{"name":"positive regulation of low-density lipoprotein receptor breakdown","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor catabolism","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor degradation","type":"exact"},{"name":"stimulation of low-density lipoprotein receptor catabolic process","type":"narrow"},{"name":"up regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor catabolic process","type":"exact"}],"termid":"GO:0032805"}


id: GO:0050520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-diacylglycerol + choline = 1,2-diacyl-sn-glycero-3-phosphocholine + CMP + H+.","definition_xrefs":["RHEA:14597","EC:2.7.8.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016780"],"is_obsolete":false,"name":"phosphatidylcholine synthase activity","secondary_identifiers":["MetaCyc:2.7.8.24-RXN","KEGG_REACTION:R05794"],"synonyms":[{"name":"CDP-diacylglycerol:choline O-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diglyceride-choline O-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiglyceride-choline O-phosphatidyltransferase activity","type":"related"},{"name":"PC synthase activity","type":"related"}],"termid":"GO:0050520"}


id: GO:1905032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane repolarization during cardiac muscle cell action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:rph","GOC:BHF_miRNA","GO_REF:0000058","GOC:TermGenie","PMID:23157812","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905031"},{"relation_name":"negatively_regulates","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane repolarization during cardiac muscle cell action potential","synonyms":[{"name":"down regulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of membrane repolarization during cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:1905032"}


id: GO:0072752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rapamycin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to rapamycin","termid":"GO:1901355"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rapamycin","termid":"GO:0072752"}


id: PR:P20772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trifunctional purine biosynthetic protein adenosine-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional purine biosynthetic protein ADE1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.01","secondary_identifiers":["UniProtKB:P20772"],"synonyms":[{"name":"Spom972h-GART","type":"exact"}],"termid":"PR:P20772"}


id: PBO:0041002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BORA aurora kinase A activator","termid":"PBO:0041002"}


id: PBO:0056584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter regulator 1","termid":"PBO:0056584"}


id: GO:0051129
data:
  {"annotated_genes":["SJAG_03508","SJAG_01082","SJAG_02795","SJAG_04884","SJAG_02336","SJAG_03072","SJAG_02838","SJAG_01297","SJAG_00823","SJAG_01679","SJAG_04287","SJAG_03438","SJAG_03048","SJAG_05978","SJAG_01680","SJAG_01464","SJAG_02514","SJAG_01894","SJAG_02451","SJAG_00229","SJAG_01716","SJAG_02700","SJAG_01825","SJAG_04943","SJAG_03455","SJAG_00304","SJAG_02723","SJAG_01790","SJAG_00279","SJAG_04638","SJAG_04203","SJAG_00526","SJAG_01787","SJAG_02169","SJAG_00883","SJAG_00855","SJAG_00460","SJAG_03353","SJAG_03327","SJAG_03126","SJAG_03681","SJAG_02592","SJAG_00364","SJAG_00266","SJAG_03592","SJAG_04259","SJAG_04369","SJAG_03255","SJAG_01993","SJAG_02392","SJAG_04999","SJAG_00845","SJAG_04126","SJAG_00369","SJAG_01837","SJAG_04455","SJAG_03591","SJAG_06270","SJAG_03581","SJAG_01386","SJAG_04699","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80949,82006,94185,77331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[101488,110213,109181,116268,113944,105816,117903,115775,92569],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[108263,116496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[116258,118061,90901,108564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[108265,101330,116499,103714,111878,117560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[76285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[100169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[96455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[119962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[118307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[108403,103962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[105618,96236,97734,92614,112741,104284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[105200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[96064],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[104289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[108601,79136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[109928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[110450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[97519,109048,109182,94790,103186,112141,92573,74682,95319,101490,109493,106980,94705,93591,117906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[108528,108304,108206,93600,117338,109359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045875"},{"annotations":[103371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061192"},{"annotations":[115780],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[118681],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[103254],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"negatively_regulates","term_name":"cellular component 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regulation of cellular component organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell organization","type":"exact"},{"name":"down-regulation of cell organization","type":"exact"},{"name":"downregulation of cell organization","type":"exact"},{"name":"inhibition of cell organization","type":"narrow"},{"name":"negative regulation of cell organisation","type":"related"},{"name":"negative regulation of cellular component organization and biogenesis","type":"related"}],"termid":"GO:0051129","terms_by_termid":{"GO:0007094":null,"GO:0010637":null,"GO:0031030":null,"GO:0034316":null,"GO:0045128":null,"GO:0045806":null,"GO:0045875":null,"GO:0051016":null,"GO:0051598":null,"GO:0060906":null,"GO:0061188":null,"GO:0061192":null,"GO:0090258":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1903500":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905560":null,"GO:1905757":null,"GO:2000432":null,"GO:2000816":null}}


id: GO:0160191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a C28-steroid + O2 + reduced NADPH--hemoprotein reductase = a (22S)-22-hydroxy C28-steroid + H+ + H2O + oxidized NADPH--hemoprotein reductase. Also catalyzes the C-22 hydroxylation of a variety of C27 and C29 steroids.","definition_xrefs":["EC:1.14.14.178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"steroid 22S-hydroxylase activity","synonyms":[{"name":"steroid C-22 hydroxylase activity","type":"exact"}],"termid":"GO:0160191"}


id: PBO:0073868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 4","termid":"PBO:0073868"}


id: FYPO:0001000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested normally in G1 phase when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","termid":"FYPO:0000711"},{"relation_name":"is_a","term_name":"normally arrested mitotic cell cycle progression","termid":"FYPO:0001025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle arrest in mitotic G1 phase during nitrogen starvation","synonyms":[{"name":"mitotic G1 phase arrest during nitrogen starvation","type":"exact"},{"name":"normal cell cycle arrest in mitotic G1 phase during nitrogen depletion","type":"exact"},{"name":"normal cell cycle arrest in mitotic G1 phase during nitrogen deprivation","type":"exact"},{"name":"normal mitotic cell cycle arrest in G1 phase during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001000"}


id: MONDO:0011677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Megarbane syndrome","secondary_identifiers":["MESH:C536145","MEDGEN:339864","OMIM:606527","UMLS:C1847871"],"synonyms":[{"name":"Megarbane syndrome","type":"exact"},{"name":"short stature, abnormal face, joint laxity, hernias, delayed bone age, and severe psychomotor retardation","type":"related"}],"termid":"MONDO:0011677","xrefs":{"Monarch":{"xref_id":"0011677"}}}


id: GO:0070023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is formed by the association of a heterodimeric interleukin-12 receptor complex with an interleukin-12 heterodimer.","definition_xrefs":["PMID:11900991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"interleukin-12-interleukin-12 receptor complex","synonyms":[{"name":"IL12-IL12 receptor complex","type":"exact"},{"name":"IL12B-IL12RB1-IL12RB2 complex","type":"narrow"}],"termid":"GO:0070023"}


id: PBO:0062081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 12 pseudogene","termid":"PBO:0062081"}


id: GO:0044486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the transmission of a nerve impulse in another organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of transmission of nerve impulse in another organism (obsolete GO:0044486)","synonyms":[{"name":"modulation of conduction of nerve impulse in other organism","type":"exact"},{"name":"modulation of transmission of nerve impulse in other organism","type":"exact"},{"name":"regulation of transmission of nerve impulse in other organism","type":"exact"}],"termid":"GO:0044486"}


id: PBO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKA","termid":"PBO:0002270"}


id: MONDO:0016600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute neonatal citrullinemia type I is a severe form of citrullinemia type 1 characterized biologically by hyperammonemia and clinically by progressive lethargy, poor feeding and vomiting, seizures and possible loss of consciousness, within one to a few days of birth, with variable signs of increased intracranial pressure. The condition can lead to significant neurologic deficits.","definition_xrefs":["Orphanet:247546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrullinemia type I","termid":"MONDO:0008988"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"acute neonatal citrullinemia type I","secondary_identifiers":["NANDO:2201094","MEDGEN:1843387","GARD:20659","UMLS:C5679618"],"synonyms":[{"name":"acute neonatal citrullinemia type 1","type":"exact"},{"name":"classic citrullinemia type 1","type":"exact"},{"name":"classic citrullinemia type I","type":"exact"}],"termid":"MONDO:0016600","xrefs":{"Monarch":{"xref_id":"0016600"}}}


id: PBO:0059613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 25","termid":"PBO:0059613"}


id: PR:O13913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.07 gene.","definition_xrefs":["UniProtKB:O13913","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.07","synonyms":[{"name":"Spom972h-SPAC23C11.07","type":"exact"}],"termid":"PR:O13913"}


id: GO:0060223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal rod cell. A retinal rod cell is one of the two photoreceptor subtypes in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"},{"relation_name":"part_of","term_name":"retinal rod cell differentiation","termid":"GO:0060221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal rod cell fate commitment","termid":"GO:0060223"}


id: GO:1990798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a destroyed pancreas.","definition_xrefs":["PMID:1985964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ regeneration","termid":"GO:0031100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas regeneration","termid":"GO:1990798"}


id: MONDO:0003466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synovial sarcoma characterized by the presence of a spindle cell component only.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell sarcoma","termid":"MONDO:0002927"},{"relation_name":"is_a","term_name":"monophasic synovial sarcoma","termid":"MONDO:0005067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spindle cell synovial sarcoma","secondary_identifiers":["ICDO:9041/3","DOID:5487","NCIT:C4277","MEDGEN:90795","UMLS:C0334505"],"synonyms":[{"name":"synovial sarcoma with spindle cell components","type":"exact"},{"name":"synovial sarcoma, monophasic fibrous","type":"exact"}],"termid":"MONDO:0003466","xrefs":{"Monarch":{"xref_id":"0003466"}}}


id: PBO:0084122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hEST1A/B (SMG5/6)-like protein; contributes to environment-sensing adaptive gene expression responses; Esl1p and Esl2p contain a 14-3-3-like domain and a putative PilT N-terminus ribonuclease domain; ESL1 has a paralog, ESL2, that arose from the whole genome duplication","termid":"PBO:0084122"}


id: PBO:0064154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 4 pseudogene 1","termid":"PBO:0064154"}


id: GO:0061576
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the reaction acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae it contains three subunits: lag1, lac1 and lip1.","definition_xrefs":["GOC:dph","PMID:15692566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"acyl-CoA ceramide synthase complex","termid":"GO:0061576"}


id: GO:0060077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell reduces the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory synapse","secondary_identifiers":["Wikipedia:Inhibitory_postsynaptic_potential"],"termid":"GO:0060077"}


id: PBO:0046979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member C2, pseudogene","termid":"PBO:0046979"}


id: GO:1903875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to corticosterone.","definition_xrefs":["GOC:TermGenie","GO_REF:0000067","GOC:mr","PMID:10802282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"corticosterone binding","termid":"GO:1903875"}


id: PBO:0005442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene A-4 hydrolase (predicted)","termid":"PBO:0005442"}


id: PBO:0072206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 5","termid":"PBO:0072206"}


id: MONDO:0008644
data:
  {"annotated_genes":["SJAG_02317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88964],"is_not":false,"summary":null,"term":"MONDO:0008644"}]},"cv_name":"mondo","definition":"A chromosomal disease that has material basis in deletion polymorphisms at chromosome location 22q11 and is characterized by variable developmental problems and schizoid features.","definition_xrefs":["PMID:PMID%3A+19243607","DOID:12583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"22q11.2 deletion syndrome","termid":"MONDO:0018923"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002320","MONDO:0005267"],"is_obsolete":false,"name":"velocardiofacial syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200688","UMLS:C0220704","GARD:15123","NANDO:1200339","MEDGEN:65085","ICD9:758.32","NANDO:2200712","OMIM:192430","MESH:D004062"],"synonyms":[{"name":"22q11 deletion syndrome","type":"exact"},{"name":"Shprintzen VCF syndrome","type":"exact"},{"name":"Shprintzen syndrome","type":"related"},{"name":"VCF syndrome","type":"exact"},{"name":"VCF-velocardiofacial syndrome","type":"exact"},{"name":"chromosome 22Q11.2 deletion syndrome","type":"related"},{"name":"deletion 22q11.2 syndrome","type":"exact"},{"name":"velocardiofacial syndrome","type":"exact"}],"termid":"MONDO:0008644","terms_by_termid":{"MONDO:0008644":null},"xrefs":{"Monarch":{"xref_id":"0008644"}}}


id: MONDO:0017225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The null syndrome is part of the Pelizaeus-Merzbacher disease (PMD) spectrum and is characterized by mild PMD features associated with demyelinating peripheral neuropathy.","definition_xrefs":["Orphanet:280234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelizeaus-Merzbacher spectrum disorder","termid":"MONDO:0010714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"null syndrome","secondary_identifiers":["UMLS:C5439441","MEDGEN:1740046","icd11.foundation:1663254692","GARD:17292"],"synonyms":[{"name":"PLP1 null syndrome","type":"exact"},{"name":"Pelizaeus-Merzbacher disease, null syndrome","type":"exact"}],"termid":"MONDO:0017225","xrefs":{"Monarch":{"xref_id":"0017225"}}}


id: PBO:0080959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB2 pseudogene 1","termid":"PBO:0080959"}


id: GO:0061571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into TDP to produce a TTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"gene_count":0,"genotype_count":0,"name":"obsolete TDP phosphorylation (obsolete GO:0061571)","termid":"GO:0061571"}


id: MONDO:0001732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the trigone of the urinary bladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigonitis","secondary_identifiers":["NCIT:C123175","icd11.foundation:1938116176","SCTID:74445007","MEDGEN:687797","UMLS:C1261278","DOID:13507","ICD9:595.3","ICD10CM:N30.3"],"synonyms":[{"name":"inflammation of trigone of urinary bladder","type":"exact"},{"name":"trigone of urinary bladder inflammation","type":"exact"}],"termid":"MONDO:0001732","xrefs":{"Monarch":{"xref_id":"0001732"}}}


id: PBO:0067033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 47, pseudogene","termid":"PBO:0067033"}


id: PBO:0030725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_uracil","termid":"PBO:0030725"}


id: GO:0048356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the root epithelium; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"root epithelial mucilage metabolic process","termid":"GO:0048361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root epithelial mucilage biosynthetic process","synonyms":[{"name":"root epithelial mucilage anabolism","type":"exact"},{"name":"root epithelial mucilage biosynthesis","type":"exact"},{"name":"root epithelial mucilage formation","type":"exact"},{"name":"root epithelial mucilage synthesis","type":"exact"}],"termid":"GO:0048356"}


id: PBO:0085447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of the Gcn2p kinase activity; forms a complex with Gcn20p; proposed to stimulate Gcn2p activation by an uncharged tRNA","termid":"PBO:0085447"}


id: PBO:0059995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 15","termid":"PBO:0059995"}


id: GO:0018734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: butyrolactone + H2O = 4-hydroxybutanoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete butyrolactone hydrolase activity (obsolete GO:0018734)","termid":"GO:0018734"}


id: PBO:0044413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily R member 1","termid":"PBO:0044413"}


id: PR:Q8TFG3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB18E9.05c gene.","definition_xrefs":["UniProtKB:Q8TFG3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein PB18E9.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB18E9.05c","synonyms":[{"name":"Spom972h-SPAPB18E9.05c","type":"exact"}],"termid":"PR:Q8TFG3"}


id: MONDO:0019519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare skin disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare skin disease (obsolete MONDO:0019519)","secondary_identifiers":["Orphanet:89826"],"synonyms":[{"name":"rare skin disease","type":"exact"}],"termid":"MONDO:0019519","xrefs":{"Monarch":{"xref_id":"0019519"}}}


id: PBO:0047765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOS like 1, AP-1 transcription factor subunit","termid":"PBO:0047765"}


id: GO:0102729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 6-oxocampestanol + O2 + NADPH = cathasterone + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-oxocampestanol hydroxylase activity (obsolete GO:0102729)","termid":"GO:0102729"}


id: PBO:0053913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1208","termid":"PBO:0053913"}


id: GO:0052194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on or near its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement on or near symbiont (obsolete GO:0052194)","termid":"GO:0052194"}


id: PBO:0082659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT transcriptional complex; CCR4-NOT is involved in regulation of gene expression; component of the major cytoplasmic deadenylase, which is involved in mRNA poly(A) tail shortening","termid":"PBO:0082659"}


id: PBO:0048209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit gamma2","termid":"PBO:0048209"}


id: GO:0097345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of the apoptotic signaling pathway.","definition_xrefs":["PMID:21041309","GOC:BHF","GOC:pg","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability involved in apoptotic process","termid":"GO:1902110"},{"relation_name":"part_of","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0007005","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization","synonyms":[{"name":"MOMP","type":"exact"},{"name":"mitochondrial outer membrane permeabilization during apoptotic cell death","type":"broad"},{"name":"mitochondrion outer membrane permeabilization","type":"exact"}],"termid":"GO:0097345"}


id: PBO:0090627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 family protein","termid":"PBO:0090627"}


id: GO:0070973
data:
  {"annotated_genes":["SJAG_00284","SJAG_03244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72730,79991],"is_not":false,"summary":null,"term":"GO:0070973"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at an endoplasmic reticulum exit site.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_03244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to endoplasmic reticulum exit site","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"protein localisation to endoplasmic reticulum exit site","type":"exact"},{"name":"protein localization to ER exit site","type":"exact"}],"termid":"GO:0070973","terms_by_termid":{"GO:0070973":null}}


id: PBO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphospho-oligosaccharide-protein glycosyltransferase Ost1 (predicted)","termid":"PBO:0002472"}


id: MOD:00284
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between an aspartic acid residue, a glutamic acid residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["RESID:AA0279","PubMed:10447690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyheme-L-aspartate ester-L-glutamate ester","synonyms":[{"name":"1,5-bishydroxymethyl protoporphyrin IX 1-glutamate ester 5-aspartate ester","type":"exact"},{"name":"BINDING Heme (covalent; via 2 links)","type":"exact"},{"name":"[13-[(S)-(4-amino-4-carboxy)butanoyloxymethyl]-3-[(S)-(3-amino-3-carboxy)propanoyloxymethyl]-7,12-diethenyl-8,17-dimethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"dihydroxyheme-L-aspartate ester-L-glutamate ester","type":"exact"},{"name":"peroxidase heme cofactor","type":"exact"}],"termid":"MOD:00284"}


id: GO:0032799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving low-density lipoprotein receptors.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor metabolic process","termid":"GO:0043112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein receptor particle metabolic process","synonyms":[{"name":"LDL receptor metabolic process","type":"exact"},{"name":"low-density lipoprotein receptor metabolic process","type":"exact"},{"name":"low-density lipoprotein receptor metabolism","type":"exact"}],"termid":"GO:0032799"}


id: MONDO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A degenerative spinal disease that can involve any part of the vertebra, the intervertebral disk, and the surrounding soft tissue.","definition_xrefs":["MESH:D055009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disease of bone structure","termid":"MONDO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylosis","secondary_identifiers":["MEDGEN:21295","DOID:2247","UMLS:C0038019","SCTID:48210000","ICD10CM:M47","ICD9:721.9","SCTID:8847002","ICD9:721.3"],"synonyms":[{"name":"lumbar spondylosis with myelopathy","type":"exact"},{"name":"lumbosacral spondylosis without myelopathy","type":"exact"},{"name":"spondylogenic compression of lumbar spinal cord","type":"exact"},{"name":"spondylogenic compression of thoracic spinal cord","type":"exact"},{"name":"spondylosis with myelopathy","type":"exact"},{"name":"thoracic or lumbar spondylosis with myelopathy","type":"exact"}],"termid":"MONDO:0002253","xrefs":{"Monarch":{"xref_id":"0002253"}}}


id: PBO:0036117
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_protein-protein_interaction","termid":"PBO:0036117"}


id: PBO:0031527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031527"}


id: GO:0072381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin involved in neural crest cell differentiation. The Wnt signaling pathway is the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of canonical Wnt signaling pathway involved in neural crest cell differentiation (obsolete GO:0072381)","synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway through beta-catenin involved in neural crest cell differentiation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in neural crest cell differentiation","type":"exact"}],"termid":"GO:0072381"}


id: MOD:00104
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to L-proline amide.","definition_xrefs":["PubMed:4982117","PubMed:5760861","RESID:AA0095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-proline amide","synonyms":[{"name":"(2S)-pyrrolidine-2-carboxamide","type":"exact"},{"name":"L-proline amide","type":"exact"},{"name":"MOD_RES Proline amide","type":"exact"},{"name":"ProN","type":"exact"},{"name":"amidated L-proline","type":"exact"},{"name":"prolinamide","type":"exact"}],"termid":"MOD:00104"}


id: GO:2000639
data:
  {"annotated_genes":["SJAG_01253","SJAG_00642","SJAG_00293"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93092,107839,113694],"is_not":false,"summary":null,"term":"GO:2000639"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the SREBP signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"is_a","term_name":"regulation of SREBP signaling pathway","termid":"GO:2000638"},{"relation_name":"negatively_regulates","term_name":"SREBP signaling pathway","termid":"GO:0032933"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_01253":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of SREBP signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of SREBP-mediated signaling pathway","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway","type":"exact"}],"termid":"GO:2000639","terms_by_termid":{"GO:2000639":null}}


id: RO:HOM0000047
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves the chromosomes able to pair (synapse) during meiosis.","definition_xrefs":["ISBN:0195307615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_chromosomal_homology_relationship_with","synonyms":[{"name":"chromosomal homologous to","type":"exact"}],"termid":"RO:HOM0000047"}


id: PBO:0085202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein required for chromosome stability; involved in new kinetochore assembly and sister chromatid cohesion; forms a stable complex with Iml3p; peripheral component of the Ctf19 kinetochore complex that interacts with Ctf19p, Ctf3p, and Mif2p; required for the spindle assembly checkpoint; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-N and fission yeast mis15","termid":"PBO:0085202"}


id: GO:0060073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of body fluids process in which parasympathetic nerves stimulate the bladder wall muscle to contract and expel urine from the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"excretion","termid":"GO:0007588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"micturition","secondary_identifiers":["Wikipedia:Urination"],"synonyms":[{"name":"urination","type":"exact"},{"name":"urine voiding","type":"exact"}],"termid":"GO:0060073"}


id: PBO:0070222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 155 pseudogene","termid":"PBO:0070222"}


id: MONDO:0044624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pediatric collagenous gastritis","secondary_identifiers":["UMLS:C5680109","MEDGEN:1805938","Orphanet:487809","GARD:21998"],"synonyms":[{"name":"childhood-onset collagenous gastritis","type":"exact"}],"termid":"MONDO:0044624","xrefs":{"Monarch":{"xref_id":"0044624"}}}


id: PBO:0078890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 3-1","termid":"PBO:0078890"}


id: PBO:0028180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cysteine_synthase_activity","termid":"PBO:0028180"}


id: MONDO:0020325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anaplastic large cell lymphoma (ALCL) is a rare and aggressive peripheral T-cell non-Hodgkin lymphoma, belonging to the group of CD30-positive lymphoproliferative disorders, which affects lymph nodes and extranodal sites. It is comprised of two sub-types, based on the expression of a protein called anaplastic lymphoma kinase (ALK): ALK positive and ALK negative ALCL.","definition_xrefs":["Orphanet:98841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"anaplastic large cell lymphoma","secondary_identifiers":["UMLS:C0206180","HGNC:427","ICD9:200.60","ICD9:200.6","ICDO:9714/3","EFO:0003032","DOID:0050744","MEDGEN:61533","MESH:D017728","NANDO:2200021","ONCOTREE:ALCL","GARD:3112","NCIT:C3720","SCTID:277637000"],"synonyms":[{"name":"ALCL","type":"exact"},{"name":"CD30 Positive anaplastic large cell lymphoma","type":"exact"},{"name":"CD30 positive anaplastic large cell lymphoma","type":"exact"},{"name":"Ki-1 lymphoma","type":"exact"},{"name":"Ki-1 positive anaplastic large cell lymphoma","type":"exact"},{"name":"Ki-1+ ALCL","type":"exact"},{"name":"Ki-1+ anaplastic large cell lymphoma","type":"exact"},{"name":"anaplastic large cell lymphoma","type":"exact"},{"name":"primary systemic ALCL","type":"exact"},{"name":"sACL","type":"exact"}],"termid":"MONDO:0020325","xrefs":{"Monarch":{"xref_id":"0020325"}}}


id: PBO:0029647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus_during_cellular_response_to_copper_ion","termid":"PBO:0029647"}


id: PBO:0018092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome c oxidase assembly Coa5 (predicted)","termid":"PBO:0018092"}


id: GO:1902382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 11-oxo-beta-amyrin.","definition_xrefs":["PMID:22128119","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid catabolic process","termid":"GO:0019741"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"11-oxo-beta-amyrin metabolic process","termid":"GO:1902381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"11-oxo-beta-amyrin catabolic process","synonyms":[{"name":"11-oxo-beta-amyrin breakdown","type":"exact"},{"name":"11-oxo-beta-amyrin catabolism","type":"exact"},{"name":"11-oxo-beta-amyrin degradation","type":"exact"}],"termid":"GO:1902382"}


id: GO:0072593
data:
  {"annotated_genes":["SJAG_03166","SJAG_04399","SJAG_04788","SJAG_01734","SJAG_01216","SJAG_02515","SJAG_03303","SJAG_00668","SJAG_04823","SJAG_04403","SJAG_00141","SJAG_05181","SJAG_03653","SJAG_01199","SJAG_04632","SJAG_04953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101904,97078,110801,120320,119379,106985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[106986,101906,110802,72007,77634,72769,97080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042744"},{"annotations":[90821,70437,101171,66221,61559,94998,58381,75990,91246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a reactive oxygen species, any molecules or ions formed by the incomplete one-electron reduction of oxygen. They contribute to the microbicidal activity of phagocytes, regulation of signal transduction and gene expression, and the oxidative damage to biopolymers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00668":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reactive oxygen species metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ROS metabolic process","type":"exact"},{"name":"reactive oxygen species metabolism","type":"exact"}],"termid":"GO:0072593","terms_by_termid":{"GO:0019430":null,"GO:0042744":null,"GO:0061692":null}}


id: PBO:0087350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spindle pole body (SPB) component; required for the insertion of the duplication plaque into the nuclear membrane during SPB duplication; essential for bipolar spindle formation; component of the Mps2p-Bbp1p complex; NBP1 has a paralog, YPR174C, that arose from the whole genome duplication","termid":"PBO:0087350"}


id: PBO:0017731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTC tricarboxylate transmembrane transporter (predicted)","termid":"PBO:0017731"}


id: MONDO:0013016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukocyte adhesion deficiency type III (LAD-III) is a form of LAD characterized by both severe bacterial infections and a severe bleeding disorder.","definition_xrefs":["Orphanet:99844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency","termid":"MONDO:0017570"},{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005570","MONDO:0005328","MONDO:0005046"],"is_obsolete":false,"name":"leukocyte adhesion deficiency 3","secondary_identifiers":["DOID:0110912","MESH:C567555","UMLS:C2748536","GARD:16915","MEDGEN:411605","OMIM:612840"],"synonyms":[{"name":"FERMT3 leukocyte adhesion deficiency","type":"exact"},{"name":"IADD","type":"exact"},{"name":"LAD-III","type":"exact"},{"name":"LAD1 variant","type":"exact"},{"name":"LAD1V","type":"exact"},{"name":"LAD3","type":"exact"},{"name":"integrin Activation deficiency disease","type":"related"},{"name":"integrin activation deficiency disease","type":"exact"},{"name":"lad-1 variant","type":"exact"},{"name":"lad-III","type":"exact"},{"name":"leukocyte adhesion deficiency 1 variant","type":"exact"},{"name":"leukocyte adhesion deficiency 3","type":"exact"},{"name":"leukocyte adhesion deficiency caused by mutation in FERMT3","type":"exact"},{"name":"leukocyte adhesion deficiency type 3","type":"exact"},{"name":"leukocyte adhesion deficiency type III","type":"exact"},{"name":"leukocyte adhesion deficiency, type 3","type":"related"},{"name":"leukocyte adhesion deficiency, type III","type":"related"},{"name":"leukocyte adhesion deficiency-1 variant","type":"exact"}],"termid":"MONDO:0013016","xrefs":{"Monarch":{"xref_id":"0013016"}}}


id: PBO:0059935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 21","termid":"PBO:0059935"}


id: FYPO:0005743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal invertase activity during glucose starvation","synonyms":[{"name":"normal beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"normal invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"normal invertase activity during glucose depletion","type":"exact"},{"name":"normal invertase activity during glucose deprivation","type":"exact"},{"name":"normal invertase activity during glucose limitation","type":"related"}],"termid":"FYPO:0005743"}


id: MONDO:0025514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Livedoid vasculopathy is a blood vessel disorder that causes painful ulcers and scarring (atrophie blanche) on the feet and lower legs. These symptoms can persist for months to years and the ulcers often recur.Livedoid vasculopathy lesions appear as painful red or purple marks and spots that may progress to small, tender, irregular ulcers. Symptoms tend to worsen in the winter and summer months, and affect women more often then men. Livedoid vasculopathy may occur alone or in combination with another condition, such as lupus or thrombophilia.","definition_xrefs":["GARD:0012784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"livedoid vasculopathy","secondary_identifiers":["Orphanet:542643","DOID:0040099","ICD9:709.1","MESH:D000090122","GARD:12784","icd11.foundation:1237292304","ICD10CM:L95.0","ICD9CM:709.1","SCTID:238762002","UMLS:C0343081","MEDGEN:575376"],"synonyms":[{"name":"idiopathic atrophic blanche","type":"related"},{"name":"livedo reticularis with summer ulcerations","type":"related"},{"name":"livedo reticularis with winter ulcerations","type":"related"},{"name":"livedo vasculitis","type":"related"},{"name":"livedoid vasculitis","type":"exact"},{"name":"livedoid vasculopathy","type":"exact"},{"name":"segmental hyalinizing vasculopathy","type":"related"},{"name":"white atrophy","type":"related"}],"termid":"MONDO:0025514","xrefs":{"Monarch":{"xref_id":"0025514"}}}


id: PBO:0058728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6856","termid":"PBO:0058728"}


id: GO:0052541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose metabolic process","termid":"GO:0030243"},{"relation_name":"is_a","term_name":"cell wall beta-glucan metabolic process","termid":"GO:0034406"},{"relation_name":"part_of","term_name":"plant-type cell wall organization","termid":"GO:0009664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"plant-type cell wall cellulose metabolic process","synonyms":[{"name":"cell wall cellulose metabolism","type":"exact"},{"name":"cellulose and pectin-containing cell wall cellulose metabolic process","type":"exact"}],"termid":"GO:0052541"}


id: PBO:0063311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycomb group ring finger 5","termid":"PBO:0063311"}


id: MONDO:0859314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 108","secondary_identifiers":["MEDGEN:1824026","OMIM:620115","UMLS:C5774253","DOID:0070394"],"termid":"MONDO:0859314","xrefs":{"Monarch":{"xref_id":"0859314"}}}


id: PBO:0041536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 67","termid":"PBO:0041536"}


id: PR:O43015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2G2.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase C2G2.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.17c","synonyms":[{"name":"Spom972h-SPBC2G2.17c","type":"exact"}],"termid":"PR:O43015"}


id: PBO:0069862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1149, pseudogene","termid":"PBO:0069862"}


id: PBO:0005280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type proton ATPase, P3-type Pma2","termid":"PBO:0005280"}


id: GO:0102004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(all-trans-octaprenyl)benzene-1,2-diol + S-adenosyl-L-methionine = H+ + 2-methoxy-6-(all-trans-octaprenyl)phenol + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-octaprenyl-6-hydroxyphenol methylase activity (obsolete GO:0102004)","termid":"GO:0102004"}


id: PBO:0047574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor binding protein 2","termid":"PBO:0047574"}


id: PR:Q9C100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein O-mannosyl-transferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.09","secondary_identifiers":["UniProtKB:Q9C100"],"synonyms":[{"name":"Spom972h-POMT2","type":"exact"}],"termid":"PR:Q9C100"}


id: PBO:0003449
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.71","termid":"PBO:0003449"}


id: PBO:0082642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of mRNP complexes associated with polyribosomes; involved in localization of mRNAs to P bodies; implicated in secretion and nuclear segregation; multicopy suppressor of BFA (Brefeldin A) sensitivity","termid":"PBO:0082642"}


id: PBO:0111062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pig-G, CP2 mannose-ethanolamine phosphotransferase GPI anchor biosynthesis protein Gpi7","termid":"PBO:0111062"}


id: PBO:0049169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 related adaptor protein like","termid":"PBO:0049169"}


id: MONDO:0010355
data:
  {"annotated_genes":["SJAG_01465","SJAG_03286","SJAG_03635"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88888,88889,88890],"is_not":false,"summary":null,"term":"MONDO:0010355"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Claes-Jensen type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:335139","OMIM:300534","SCTID:719161008","DOID:0060809","Orphanet:85279","UMLS:C1845243","MESH:C564494","GARD:16744"],"synonyms":[{"name":"MRXSCJ","type":"exact"},{"name":"MRXSJ","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic, Claes-Jensen type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Claes-Jensen type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, JARID1C-related","type":"related"},{"name":"mental retardation, X-linked, syndromic, Claes-Jensen type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, JARID1C-related","type":"related"},{"name":"syndromic X-linked intellectual disability Claes-Jensen type","type":"exact"},{"name":"syndromic X-linked intellectual disability JARID1C-related","type":"exact"},{"name":"syndromic X-linked intellectual disability due to JARID1C mutation","type":"exact"},{"name":"syndromic X-linked mental retardation JARID1C-related","type":"exact"}],"termid":"MONDO:0010355","terms_by_termid":{"MONDO:0010355":null},"xrefs":{"Monarch":{"xref_id":"0010355"}}}


id: PBO:0067781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 82","termid":"PBO:0067781"}


id: PBO:0045596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 7 (pseudogene)","termid":"PBO:0045596"}


id: PBO:0047145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 180 member A","termid":"PBO:0047145"}


id: FYPO:0000916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal pyruvate dehydrogenase activity","termid":"FYPO:0000915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased pyruvate dehydrogenase activity","synonyms":[{"name":"decreased PDH activity","type":"exact"},{"name":"reduced pyruvate dehydrogenase activity","type":"exact"}],"termid":"FYPO:0000916"}


id: PBO:0067395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 500, pseudogene","termid":"PBO:0067395"}


id: GO:0016322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron remodeling","synonyms":[{"name":"axon pruning","type":"narrow"},{"name":"neuron remodelling","type":"exact"},{"name":"neuronal remodeling","type":"exact"}],"termid":"GO:0016322"}


id: GO:0061386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The closure of the temporary ventral gap in the optic cup that contributes to its shaping.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"closure of optic fissure","synonyms":[{"name":"closure or choriod fissure","type":"related"}],"termid":"GO:0061386"}


id: PBO:0013229
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressivity","termid":"PBO:0013229"}


id: PBO:0071336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28","termid":"PBO:0071336"}


id: MONDO:0014106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the FGF17 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 20 with or without anosmia","secondary_identifiers":["ICD10CM:E23.0","MEDGEN:815313","UMLS:C3808983","GARD:15932","OMIM:615270","DOID:0090082"],"synonyms":[{"name":"FGF17 hypogonadotropic hypogonadism","type":"exact"},{"name":"HH20","type":"related"},{"name":"hypogonadotropic hypogonadism 20 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in FGF17","type":"exact"}],"termid":"MONDO:0014106","xrefs":{"Monarch":{"xref_id":"0014106"}}}


id: GO:1905724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trypanothione biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18949025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of trypanothione biosynthetic process","termid":"GO:1905722"},{"relation_name":"positively_regulates","term_name":"trypanothione biosynthetic process","termid":"GO:0019342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"positive regulation of trypanothione biosynthetic process","synonyms":[{"name":"activation of trypanothione anabolism","type":"narrow"},{"name":"activation of trypanothione biosynthesis","type":"narrow"},{"name":"activation of trypanothione biosynthetic process","type":"narrow"},{"name":"activation of trypanothione formation","type":"narrow"},{"name":"activation of trypanothione synthesis","type":"narrow"},{"name":"positive regulation of trypanothione anabolism","type":"exact"},{"name":"positive regulation of trypanothione biosynthesis","type":"exact"},{"name":"positive regulation of trypanothione formation","type":"exact"},{"name":"positive regulation of trypanothione synthesis","type":"exact"},{"name":"up regulation of trypanothione anabolism","type":"exact"},{"name":"up regulation of trypanothione biosynthesis","type":"exact"},{"name":"up regulation of trypanothione biosynthetic process","type":"exact"},{"name":"up regulation of trypanothione formation","type":"exact"},{"name":"up regulation of trypanothione synthesis","type":"exact"},{"name":"up-regulation of trypanothione anabolism","type":"exact"},{"name":"up-regulation of trypanothione biosynthesis","type":"exact"},{"name":"up-regulation of trypanothione biosynthetic process","type":"exact"},{"name":"up-regulation of trypanothione formation","type":"exact"},{"name":"up-regulation of trypanothione synthesis","type":"exact"},{"name":"upregulation of trypanothione anabolism","type":"exact"},{"name":"upregulation of trypanothione biosynthesis","type":"exact"},{"name":"upregulation of trypanothione biosynthetic process","type":"exact"},{"name":"upregulation of trypanothione formation","type":"exact"},{"name":"upregulation of trypanothione synthesis","type":"exact"}],"termid":"GO:1905724"}


id: PBO:0057951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3674","termid":"PBO:0057951"}


id: PBO:0041483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 96","termid":"PBO:0041483"}


id: PBO:0016929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Aip1","termid":"PBO:0016929"}


id: PBO:0089137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Lsb6","termid":"PBO:0089137"}


id: PBO:0048927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi integral membrane protein 4","termid":"PBO:0048927"}


id: MONDO:0007615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laurin-Sandrow syndrome (LSS) is characterized by complete polysyndactyly of the hands, mirror feet and nose anomalies (hypoplasia of the nasal alae and short columella), often associated with ulnar and/or fibular duplication (and sometimes tibial agenesis). It has been described in less than 20 cases. Some cases with the same clinical signs but without nasal defects have also been reported, and may represent the same entity. The etiology of LSS is unknown. Different modes of inheritance have been suggested.","definition_xrefs":["Orphanet:2378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laurin-Sandrow syndrome","secondary_identifiers":["MESH:C535689","SCTID:715440003","OMIM:135750","DOID:0111350","GARD:155","icd11.foundation:671594481","MEDGEN:340697","UMLS:C1851100"],"synonyms":[{"name":"LSS","type":"related"},{"name":"Sandrow syndrome","type":"exact"},{"name":"fibula and ulna, Duplication of, with absence of tibia and radius","type":"related"},{"name":"fibula ulna duplication tibia radius absence","type":"related"},{"name":"laurin Sandrow syndrome","type":"related"},{"name":"laurin-Sandrow syndrome","type":"exact"},{"name":"laurin-Sandrow syndrome, segmental","type":"related"},{"name":"mirror hands and feet with nasal defects","type":"related"},{"name":"mirror hands and feets-nasal defects syndrome","type":"exact"},{"name":"mirror-Image polydactyly","type":"related"},{"name":"tetramelic mirror-Image polydactyly","type":"related"}],"termid":"MONDO:0007615","xrefs":{"Monarch":{"xref_id":"0007615"}}}


id: PBO:0080966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 7C","termid":"PBO:0080966"}


id: GO:0080027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a herbivore.","definition_xrefs":["PMID:18987211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to herbivore","termid":"GO:0080027"}


id: GO:0002416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting IgG immunoglobulin, via transcytosis using the FcRn (also known as the neonatal Fc receptor; gene name FCGRT), from apical surface of an epithelial cell to the basolateral surface or vice versa depending on the location. This process is used for uptake of IgG from the milk in the gut in rodents, for transplacental transport of IgG from mother to embryo in humans, and for maintenance of a steady-state distribution of IgG across epithelial boundaries in general in adult mammals.","definition_xrefs":["ISBN:0781735149","ISBN:081533642X","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin transcytosis in epithelial cells","termid":"GO:0002414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"IgG immunoglobulin transcytosis in epithelial cells mediated by FcRn immunoglobulin receptor","synonyms":[{"name":"IgG antibody transcytosis in epithelial cells mediated by FcRn immunoglobulin receptor","type":"exact"},{"name":"IgG immunoglobulin transcytosis in epithelial cells mediated by neonatal immunoglobulin receptor","type":"exact"}],"termid":"GO:0002416"}


id: GO:0032652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-1 production","secondary_identifiers":["GO:0045360","GO:0050704"],"synonyms":[{"name":"regulation of IL-1 production","type":"exact"},{"name":"regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-1 secretion","type":"narrow"}],"termid":"GO:0032652"}


id: PBO:0087312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small subunit of carbamoyl phosphate synthetase; carbamoyl phosphate synthetase catalyzes a step in the synthesis of citrulline, an arginine precursor; translationally regulated by an attenuator peptide encoded by YOR302W within the CPA1 mRNA 5'-leader","termid":"PBO:0087312"}


id: PATO:0001500
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being gradually narrower or thinner toward one end.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tapered","synonyms":[{"name":"taper","type":"exact"}],"termid":"PATO:0001500"}


id: PBO:0005785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf26","termid":"PBO:0005785"}


id: GO:0070257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of mucus from a cell or a tissue.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of mucus secretion","termid":"GO:0070255"},{"relation_name":"positively_regulates","term_name":"mucus secretion","termid":"GO:0070254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mucus secretion","synonyms":[{"name":"positive regulation of mucus production","type":"exact"}],"termid":"GO:0070257"}


id: GO:0050859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell receptor signaling pathway","termid":"GO:0050855"},{"relation_name":"is_a","term_name":"negative regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050858"},{"relation_name":"negatively_regulates","term_name":"B cell receptor signaling pathway","termid":"GO:0050853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell receptor signaling pathway","synonyms":[{"name":"down regulation of B cell receptor signaling pathway","type":"exact"},{"name":"down-regulation of B cell receptor signaling pathway","type":"exact"},{"name":"downregulation of B cell receptor signaling pathway","type":"exact"},{"name":"inhibition of B cell receptor signaling pathway","type":"narrow"},{"name":"negative regulation of B cell receptor signalling pathway","type":"exact"},{"name":"negative regulation of B lymphocyte receptor signaling pathway","type":"exact"},{"name":"negative regulation of B lymphocyte receptor signalling pathway","type":"exact"},{"name":"negative regulation of B-cell receptor signaling pathway","type":"exact"},{"name":"negative regulation of B-cell receptor signalling pathway","type":"exact"},{"name":"negative regulation of B-lymphocyte receptor signaling pathway","type":"exact"},{"name":"negative regulation of B-lymphocyte receptor signalling pathway","type":"exact"}],"termid":"GO:0050859"}


id: PBO:0068074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 379","termid":"PBO:0068074"}


id: PBO:0090226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S2","termid":"PBO:0090226"}


id: FYPO:0004677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which purine-specific mismatch base pair DNA N-glycosylase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal purine-specific mismatch base pair DNA N-glycosylase activity","termid":"FYPO:0004676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished purine-specific mismatch base pair DNA N-glycosylase activity","synonyms":[{"name":"purine-specific mismatch base pair DNA N-glycosylase activity abolished","type":"exact"}],"termid":"FYPO:0004677"}


id: PR:G2TRQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.17 gene.","definition_xrefs":["UniProtKB:G2TRQ5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3E7.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.17","synonyms":[{"name":"Spom972h-SPBC3E7.17","type":"exact"}],"termid":"PR:G2TRQ5"}


id: PBO:0052950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase suppressor of ras 1 pseudogene 1","termid":"PBO:0052950"}


id: FYPO:0001705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type). A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint","synonyms":[{"name":"normal DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation under non-stressed conditions","type":"narrow"},{"name":"normal mitotic DNA damage checkpoint during cellular response to DNA damage","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0001705"}


id: GO:0034769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the basement membrane in the context of a normal process such as imaginal disc eversion.","definition_xrefs":["GOC:sart","PMID:17301221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix disassembly","termid":"GO:0022617"},{"relation_name":"is_a","term_name":"basement membrane organization","termid":"GO:0071711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basement membrane disassembly","secondary_identifiers":["GO:0060881"],"synonyms":[{"name":"basal lamina disassembly","type":"related"}],"termid":"GO:0034769"}


id: PBO:0060981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve growth factor receptor","termid":"PBO:0060981"}


id: MONDO:0005546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic disorder of unknown etiology characterized by pain, stiffness, and tenderness in the muscles of neck, shoulders, back, hips, arms, and legs. Other signs and symptoms include headaches, fatigue, sleep disturbances, and painful menstruation.","definition_xrefs":["NCIT:C87497"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myositis disease","termid":"MONDO:0021167"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chronic pain syndrome","termid":"MONDO:0024317"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromyalgia","secondary_identifiers":["SCTID:24693007","MEDGEN:42018","UMLS:C0016053","ICD9:729.1","DOID:631","EFO:0005687","Orphanet:41842","SCTID:203082005","ICD10CM:M79.7","MESH:D005356"],"synonyms":[{"name":"fibromyalgia","type":"exact"},{"name":"fibromyalgia syndrome","type":"exact"}],"termid":"MONDO:0005546","xrefs":{"Monarch":{"xref_id":"0005546"}}}


id: GO:0160108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process whose specific outcome is the progression of a gross anatomical part of an animal from an initial immature state, to a later, more mature state.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal gross anatomical part developmental process","synonyms":[{"name":"animal development","type":"related"}],"termid":"GO:0160108"}


id: GO:0004189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the Glu-Tyr bond to release the C-terminal tyrosine residue from the native tyrosinated tubulin. Inactive on Z-Glu-Tyr.","definition_xrefs":["EC:3.4.17.17"],"gene_count":0,"genotype_count":0,"name":"obsolete tubulinyl-Tyr carboxypeptidase activity (obsolete GO:0004189)","synonyms":[{"name":"TTCPase activity","type":"related"},{"name":"brain I carboxypeptidase activity","type":"related"},{"name":"carboxypeptidase-tubulin activity","type":"related"},{"name":"soluble carboxypeptidase activity","type":"related"},{"name":"tubulin carboxypeptidase activity","type":"related"},{"name":"tubulin-tyrosine carboxypeptidase activity","type":"related"},{"name":"tubulinyl-Tyr carboxypeptidase activity","type":"exact"},{"name":"tubulinyl-tyrosine carboxypeptidase activity","type":"exact"},{"name":"tubulinyltyrosine carboxypeptidase activity","type":"related"},{"name":"tyrosinotubulin carboxypeptidase activity","type":"related"},{"name":"tyrosyltubulin carboxypeptidase activity","type":"related"}],"termid":"GO:0004189"}


id: FYPO:0002449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer signal recognition particles (SRPs) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"signal recognition particles present in decreased numbers","synonyms":[{"name":"SRPs present in decreased numbers","type":"exact"},{"name":"decreased level of SRPs","type":"related"},{"name":"decreased signal recognition particle formation during vegetative growth","type":"related"},{"name":"fewer signal recognition particles present during vegetative growth","type":"exact"},{"name":"signal recognition particles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"signal recognition particles present in decreased numbers during vegetative growth","type":"exact"},{"name":"signal recognition particles present in reduced numbers","type":"exact"}],"termid":"FYPO:0002449"}


id: PBO:0048278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT13 antisense RNA 1","termid":"PBO:0048278"}


id: PBO:0082615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-coiled protein of unknown function; identified as a high-copy suppressor of a dbp5 mutation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082615"}


id: GO:0072300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of metanephric glomerulus development, the progression of the metanephric glomerulus over time from its initial formation until its mature state. The metanephric glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney, or metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metanephros development","termid":"GO:0072216"},{"relation_name":"is_a","term_name":"regulation of metanephric glomerulus development","termid":"GO:0072298"},{"relation_name":"is_a","term_name":"positive regulation of glomerulus development","termid":"GO:0090193"},{"relation_name":"positively_regulates","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric glomerulus development","termid":"GO:0072300"}


id: GO:0019880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete bacteriocin susceptibility/resistance (obsolete GO:0019880)","synonyms":[{"name":"bacteriocin susceptibility/resistance","type":"exact"}],"termid":"GO:0019880"}


id: MONDO:0033981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete krt1-related diffuse nonepidermolytic keratoderma (obsolete MONDO:0033981)","termid":"MONDO:0033981","xrefs":{"Monarch":{"xref_id":"0033981"}}}


id: GO:0052080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a MAP kinase-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host MAPK cascade","secondary_identifiers":["GO:0052277"],"synonyms":[{"name":"modulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"related"},{"name":"modulation by symbiont of host innate immune response MAPK kinase signaling","type":"narrow"},{"name":"modulation of defense-related host MAPK-mediated signal transduction pathway by organism","type":"narrow"},{"name":"modulation of defense-related host mitogen activated protein kinase-mediated signal transduction pathway by organism","type":"narrow"},{"name":"perturbation by symbiont of host MAP kinase signal transduction pathway","type":"exact"},{"name":"perturbation of host MAP signal transduction pathway","type":"exact"},{"name":"perturbation of host MAPK kinase signaling pathway","type":"exact"},{"name":"perturbation of host MAPK signal transduction pathway","type":"exact"},{"name":"perturbation of host innate immune response MAPK kinase signaling","type":"narrow"}],"termid":"GO:0052080"}


id: FYECO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Zn ions","synonyms":[{"name":"zinc ions added","type":"exact"}],"termid":"FYECO:0000172"}


id: GO:1905287
data:
  {"annotated_genes":["SJAG_00256","SJAG_03309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89680,103305],"is_not":false,"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any positive regulation of G2/M transition of mitotic cell cycle that is involved in cellular response to nitrogen starvation.","definition_xrefs":["PMID:26776736","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010971"},{"relation_name":"part_of","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_03309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044772","GO:0008150"],"is_obsolete":false,"name":"positive regulation of G2/M transition of mitotic cell cycle involved in cellular response to nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of mitotic entry involved in cellular response to nitrogen starvation","type":"exact"}],"termid":"GO:1905287","terms_by_termid":{"GO:1905287":null}}


id: PBO:0002420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved protein","termid":"PBO:0002420"}


id: GO:1990915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an ascospore wall.","definition_xrefs":["PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cell wall","termid":"GO:0005199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of ascospore wall","termid":"GO:1990915"}


id: GO:1990350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex facilitating glucose transport into, out of or within a cell, or between cells.","definition_xrefs":["PMID:15449578","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glucose transporter complex","termid":"GO:1990350"}


id: PBO:0082857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factors for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); human homology TRAPPC1 complements yeast null mutant","termid":"PBO:0082857"}


id: PBO:0113317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in removal of stalled ribosomes; acts as cofactor for Fap1p and Fpr1p in ubiquitination of stalled monosomes and subsequent degradation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; mRNA is enriched in Scp160p-associated mRNPs; YIL161W is a non-essential gene","termid":"PBO:0113317"}


id: PBO:0065178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein only RNase P catalytic subunit","termid":"PBO:0065178"}


id: PBO:0049650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 4","termid":"PBO:0049650"}


id: GO:2000496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000495"},{"relation_name":"negatively_regulates","term_name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000496"}


id: PBO:0086438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative K+/H+ antiporter; involved in intracellular cation homeostasis; promotes copper binding to Fet3p multicopper oxidase; localized to Golgi vesicles and detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086438"}


id: GO:1904686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic spindle disassembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25963819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"regulates","term_name":"mitotic spindle disassembly","termid":"GO:0051228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007049","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of mitotic spindle disassembly","synonyms":[{"name":"regulation of mitotic spindle breakdown","type":"exact"},{"name":"regulation of mitotic spindle catabolism","type":"exact"},{"name":"regulation of mitotic spindle degradation","type":"exact"},{"name":"regulation of spindle breakdown during mitosis","type":"exact"},{"name":"regulation of spindle degradation during mitosis","type":"exact"},{"name":"regulation of spindle disassembly during mitosis","type":"exact"}],"termid":"GO:1904686"}


id: MONDO:0013249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the PTPRQ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 84A","secondary_identifiers":["DOID:0110529","MEDGEN:462004","GARD:22634","OMIM:613391","UMLS:C3150654"],"synonyms":[{"name":"DFNB84A","type":"narrow"},{"name":"PTPRQ autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 84A","type":"narrow"},{"name":"autosomal recessive deafness 84A with vestibular dysfunction","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 84A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in PTPRQ","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 84A","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 84A","type":"exact"},{"name":"deafness, autosomal recessive 84","type":"narrow"},{"name":"deafness, autosomal recessive 84A","type":"narrow"},{"name":"deafness, autosomal recessive 84A, with vestibular dysfunction","type":"narrow"},{"name":"deafness, autosomal recessive 84a","type":"narrow"},{"name":"deafness, autosomal recessive type 84A","type":"narrow"}],"termid":"MONDO:0013249","xrefs":{"Monarch":{"xref_id":"0013249"}}}


id: PBO:0038607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACBD3 antisense RNA 1","termid":"PBO:0038607"}


id: PBO:0071333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 10","termid":"PBO:0071333"}


id: PBO:0070591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 57","termid":"PBO:0070591"}


id: GO:0045940
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving steroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"positively_regulates","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of steroid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of steroid metabolic process","type":"narrow"},{"name":"positive regulation of steroid metabolism","type":"exact"},{"name":"stimulation of steroid metabolic process","type":"narrow"},{"name":"up regulation of steroid metabolic process","type":"exact"},{"name":"up-regulation of steroid metabolic process","type":"exact"},{"name":"upregulation of steroid metabolic process","type":"exact"}],"termid":"GO:0045940","terms_by_termid":{"GO:0070452":null}}


id: FYPO:0002689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cumene hydroperoxide. Cells stop growing (and may die) at a concentration of cumene hydroperoxide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to cumene hydroperoxide","synonyms":[{"name":"hypersensitive to cumene hydroperoxide","type":"exact"},{"name":"sensitive to cumene hydroperoxide during mitotic cell cycle","type":"related"},{"name":"sensitive to cumene hydroperoxide during vegetative growth","type":"exact"}],"termid":"FYPO:0002689"}


id: GO:0102425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: myricetin + UDP-alpha-D-glucose = myricetin 3-O-beta-D-glucopyranoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete myricetin 3-O-glucosyltransferase activity (obsolete GO:0102425)","termid":"GO:0102425"}


id: PBO:0030689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_M-factor","termid":"PBO:0030689"}


id: PBO:0031164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamine_import","termid":"PBO:0031164"}


id: GO:0031322
data:
  {"annotated_genes":["SJAG_04901","SJAG_00405","SJAG_03746","SJAG_04010","SJAG_00486","SJAG_02529","SJAG_05309","SJAG_02248","SJAG_04271","SJAG_01483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94151,98763,99448,101736,101737,104840,106053,108781,109670,115926],"is_not":false,"summary":null,"term":"GO:0031322"}]},"cv_name":"biological_process","definition":"A spindle pole body (SPB) organization process that takes place during the second meiotic division during ascospore formation and results in the structural reorganization of the SPB; includes the recruitment of sporulation-specific proteins to the outer plaque to form the meiotic outer plaque (MOP).","definition_xrefs":["PMID:14702385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"ascospore-type prospore assembly","termid":"GO:0031321"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00486":null,"SJAG_01483":null,"SJAG_02248":null,"SJAG_02529":null,"SJAG_03746":null,"SJAG_04010":null,"SJAG_04271":null,"SJAG_04901":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030437","GO:0008150","GO:0044085","GO:0000226","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"ascospore-type prospore-specific spindle pole body remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore-type prospore-specific spindle pole body modification","type":"related"},{"name":"ascospore-type prospore-specific spindle pole body remodelling","type":"exact"},{"name":"forespore specific spindle pole body remodeling","type":"exact"},{"name":"forespore-specific spindle pole body remodeling","type":"exact"},{"name":"prospore-specific spindle pole body remodeling","type":"exact"},{"name":"sporulation-specific spindle pole body remodeling","type":"exact"}],"termid":"GO:0031322","terms_by_termid":{"GO:0031322":null}}


id: PBO:0026679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_dithiothreitol","termid":"PBO:0026679"}


id: PBO:0064848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B","termid":"PBO:0064848"}


id: GO:0036164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to an underlying abiotic (non-living) substrate via adhesion molecules.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-abiotic substrate adhesion","synonyms":[{"name":"cell-abiotic surface adhesion","type":"related"}],"termid":"GO:0036164"}


id: GO:0039010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the pronephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of pronephric tubule identity","termid":"GO:0039005"},{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in pronephric nephron development","termid":"GO:0072196"},{"relation_name":"part_of","term_name":"pronephric distal tubule morphogenesis","termid":"GO:0039013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric distal tubule identity","termid":"GO:0039010"}


id: MONDO:0001006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"optic atrophy","termid":"MONDO:0003608"},{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucomatous atrophy of optic disk","secondary_identifiers":["MEDGEN:543288","SCTID:1207009","DOID:10337","ICD9:377.14","UMLS:C0271342"],"synonyms":[{"name":"glaucomatous atrophy [cupping] of optic disc","type":"exact"},{"name":"glaucomatous atrophy [cupping] of optic disk","type":"exact"}],"termid":"MONDO:0001006","xrefs":{"Monarch":{"xref_id":"0001006"}}}


id: PBO:0077748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll interacting protein","termid":"PBO:0077748"}


id: PR:Q9C114
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1A6.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A6.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.11","synonyms":[{"name":"Spom972h-SPAC1A6.11","type":"exact"}],"termid":"PR:Q9C114"}


id: GO:0018061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a N-terminal peptidyl-phenylalanine residue by either oxidative deamination or by transamination and subsequent reduction to form peptidyl-L-3-phenyllactic acid.","definition_xrefs":["RESID:AA0128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-phenylalanine modification","termid":"GO:0018207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-3-phenyllactic acid biosynthetic process from peptidyl-phenylalanine","synonyms":[{"name":"peptidyl-L-3-phenyllactic acid anabolism from peptidyl-phenylalanine","type":"exact"},{"name":"peptidyl-L-3-phenyllactic acid formation from peptidyl-phenylalanine","type":"exact"},{"name":"peptidyl-L-3-phenyllactic acid synthesis from peptidyl-phenylalanine","type":"exact"}],"termid":"GO:0018061"}


id: GO:1904788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of induction of conjugation with cellular fusion.","definition_xrefs":["GO_REF:0000063","PMID:22144909","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of induction of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter (obsolete GO:1904788)","synonyms":[{"name":"positive regulation of induction of conjugation with cellular fusion by global transcription regulation from Pol II promoter","type":"related"},{"name":"positive regulation of induction of conjugation with cellular fusion by regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of induction of conjugation with cellular fusion by regulation of global transcription from Pol II promoter","type":"related"},{"name":"positive regulation of induction of conjugation with cellular fusion by regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of induction of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter, global","type":"related"}],"termid":"GO:1904788"}


id: GO:0055106
data:
  {"annotated_genes":["SJAG_00071","SJAG_02485","SJAG_01515","SJAG_04699","SJAG_03809","SJAG_03858","SJAG_01051","SJAG_04428","SJAG_00666","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78368,82203,80910,81765,80936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990757"},{"annotations":[117564,100588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990948"},{"annotations":[119168,100467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097027"},{"annotations":[116630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055105"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a ubiquitin-protein transferase, an enzyme that catalyzes the covalent attachment of ubiquitin to lysine in a substrate protein.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_01051":null,"SJAG_01515":null,"SJAG_02485":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04428":null,"SJAG_04699":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"ubiquitin-protein transferase regulator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0055106","terms_by_termid":{"GO:0055105":null,"GO:0097027":null,"GO:1990757":null,"GO:1990948":null}}


id: MONDO:0018224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, EBV-positive cutaneous T-cell lymphoproliferative disorder, composed of CD8 positive cytotoxic T-lymphocytes. It affects children, almost exclusively in Latin America and Asia. Patients present with papulovesicular skin lesions, clinically resembling hydroa vacciniforme, in areas of sun-exposed skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"},{"relation_name":"is_a","term_name":"EBV-positive T-cell lymphoproliferative disorder of childhood","termid":"MONDO:0006188"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hydroa vacciniforme-like lymphoma","secondary_identifiers":["ICDO:9725/3","SCTID:763719001","UMLS:C1708397","MEDGEN:317758","Orphanet:364039","NCIT:C45327","GARD:21563"],"synonyms":[{"name":"HVLL","type":"exact"},{"name":"angiocentric cutaneous T-cell lymphoma of childhood","type":"exact"},{"name":"hV-like lymphoma","type":"exact"},{"name":"hydroa vacciniforme-like cutaneous T-cell lymphoma","type":"exact"},{"name":"hydroa vacciniforme-like lymphoma","type":"exact"},{"name":"hydroa vacciniforme-like lymphoproliferative disorder","type":"exact"},{"name":"hydroa-like cutaneous T-cell lymphoma","type":"exact"}],"termid":"MONDO:0018224","xrefs":{"Monarch":{"xref_id":"0018224"}}}


id: PBO:0115010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic P body 3'-5'-exoribonuclease Dis3L2","termid":"PBO:0115010"}


id: PBO:0113376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cysteine synthase; localized to the mitochondrial outer membrane; interacts with TCD1 and TCD2, likely forming a complex","termid":"PBO:0113376"}


id: MONDO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation that includes the brain, spinal cord and surrounding tissues secondary to systemic lupus erythematosus (SLE); it is associated with neurological and/or psychiatric features.","definition_xrefs":["NCIT:C116919"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"},{"relation_name":"excluded_subClassOf","term_name":"meningoencephalitis","termid":"MONDO:0005845"},{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"central nervous system lupus","secondary_identifiers":["MESH:D020945","UMLS:C0752332","MEDGEN:156265"],"synonyms":[{"name":"CNS lupus","type":"exact"},{"name":"Meningoencephalitides, lupus","type":"related"},{"name":"central nervous system lupus","type":"exact"},{"name":"central nervous system lupus vasculitis","type":"related"},{"name":"central nervous system systemic lupus Erythematosis","type":"related"},{"name":"lupus Meningoencephalitides","type":"related"},{"name":"lupus meningoencephalitis","type":"related"},{"name":"meningoencephalitis, lupus","type":"related"},{"name":"neuropsychiatric systemic lupus erythematosus","type":"related"},{"name":"systemic lupus Erythematosis, central nervous system","type":"related"}],"termid":"MONDO:0043985","xrefs":{"Monarch":{"xref_id":"0043985"}}}


id: GO:0070043
data:
  {"annotated_genes":["SJAG_02281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96782],"is_not":false,"summary":null,"term":"GO:0070043"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N7-methylguanine.","definition_xrefs":["GOC:mah","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02281":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"rRNA (guanine-N7-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790982"],"termid":"GO:0070043","terms_by_termid":{"GO:0070043":null}}


id: MONDO:0007004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Group of diseases mediated by the deposition of large soluble complexes of antigen and antibody with resultant damage to tissue. Besides serum sickness and the arthus reaction, evidence supports a pathogenic role for immune complexes in many other immune system diseases including glomerulonephritis, systemic lupus erythematosus (lupus erythematosus, systemic) and polyarteritis nodosa.","definition_xrefs":["MESH:D007105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type III hypersensitivity disease","secondary_identifiers":["MEDGEN:7021","UMLS:C0020951","EFO:1001222","NCIT:C114346","DOID:1557","MedDRA:10045265"],"synonyms":[{"name":"disorder of type III hypersensitivity","type":"exact"},{"name":"hypersensitivity reaction type III disease","type":"related"},{"name":"immune complex disease","type":"exact"},{"name":"type 3 hypersensitivity reaction","type":"exact"},{"name":"type III hypersensitivity","type":"exact"},{"name":"type III hypersensitivity reaction","type":"exact"}],"termid":"MONDO:0007004","xrefs":{"Monarch":{"xref_id":"0007004"}}}


id: FYPO:0003237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of splicing of RNA primary transcripts at sites that are not normally frequently used (or not spliced at all) is increased.","definition_xrefs":["PomBase:mah","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA splicing, via spliceosome","termid":"FYPO:0002916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA splicing at cryptic splice sites","synonyms":[{"name":"increased RNA splicing at cryptic splice sites during mitotic cell cycle","type":"related"},{"name":"increased RNA splicing at cryptic splice sites during vegetative growth","type":"exact"},{"name":"increased RNA splicing of cryptic introns","type":"exact"}],"termid":"FYPO:0003237"}


id: PBO:0086512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; deletion decreases transcription of downstream gene ALD6; YPL062W is not an essential gene; null mutant shows decrease in terpenoid production; homozygous diploid mutant shows a decrease in glycogen accumulation","termid":"PBO:0086512"}


id: PR:O59761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13930:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.08","secondary_identifiers":["UniProtKB:O59761"],"synonyms":[{"name":"SPCC1020.08","type":"related"},{"name":"Spom972h-TYW1","type":"exact"},{"name":"tRNA wybutosine-synthesizing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59761"}


id: GO:0022403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"One of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell cycle phase","termid":"GO:0022403"}


id: GO:0050568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-glutamine + H2O = protein L-glutamate + NH3.","definition_xrefs":["MetaCyc:CHEBDEAMID-RXN","EC:3.5.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0140096","GO:0016810"],"is_obsolete":false,"name":"protein-glutamine glutaminase activity","secondary_identifiers":["RHEA:16441"],"synonyms":[{"name":"destabilase activity","type":"related"},{"name":"glutaminyl-peptide glutaminase activity","type":"related"},{"name":"glutaminylpeptide glutaminase activity","type":"related"},{"name":"peptidoglutaminase II activity","type":"related"},{"name":"peptidylglutaminase II","type":"related"},{"name":"protein-L-glutamine amidohydrolase activity","type":"related"}],"termid":"GO:0050568"}


id: GO:0030169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a low-density lipoprotein particle, a lipoprotein particle that is rich in cholesterol esters and low in triglycerides, is typically composed of APOB100 and APOE, and has a density of 1.02-1.06 g/ml and a diameter of between 20-25 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"low-density lipoprotein particle binding","synonyms":[{"name":"LDL binding","type":"exact"}],"termid":"GO:0030169"}


id: PBO:0085963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the growth defect of mutants lacking protein kinase A activity; involved in cAMP-mediated signaling; localized to the nucleus; similar to the mouse testis-specific protein PBS13","termid":"PBO:0085963"}


id: PBO:0061985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 4 pseudogene","termid":"PBO:0061985"}


id: GO:1900490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of hydroxymethylglutaryl-CoA reductase (NADPH) activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity (obsolete GO:1900490)","synonyms":[{"name":"activation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"activation of HMG-CoA reductase activity","type":"broad"},{"name":"activation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"narrow"},{"name":"positive regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"positive regulation of HMG-CoA reductase activity","type":"broad"},{"name":"up regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"up regulation of HMG-CoA reductase activity","type":"broad"},{"name":"up regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"exact"},{"name":"up-regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"up-regulation of HMG-CoA reductase activity","type":"broad"},{"name":"up-regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"exact"},{"name":"upregulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"upregulation of HMG-CoA reductase activity","type":"broad"},{"name":"upregulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"exact"}],"termid":"GO:1900490"}


id: PBO:0076058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stonin 1","termid":"PBO:0076058"}


id: GO:0045042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conservative import of proteins into the mitochondrial intermembrane space. The entire protein enters the matrix, and then the second targeting sequence directs the protein, presumably bound to a matrix protein, across the inner membrane to the intermembrane space.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into mitochondrial intermembrane space, conservative (obsolete GO:0045042)","synonyms":[{"name":"conservative mitochondrial IMS protein import","type":"exact"},{"name":"conservative mitochondrial intermembrane space protein import","type":"exact"},{"name":"conservative protein transport into mitochondrial IMS","type":"exact"},{"name":"conservative protein transport into mitochondrial intermembrane space","type":"exact"},{"name":"protein import into mitochondrial IMS, conservative","type":"exact"},{"name":"protein import into mitochondrial intermembrane space, conservative","type":"exact"},{"name":"protein transport into mitochondrial IMS, conservative","type":"exact"},{"name":"protein transport into mitochondrial intermembrane space, conservative","type":"exact"}],"termid":"GO:0045042"}


id: PATO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's having a short, stocky build.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stubby","termid":"PATO:0001643"}


id: GO:0102603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 12-demethyl-elloramycin + S-adenosyl-L-methionine = elloramycin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 12-demethyl-elloramycin C12a O-methyltransferase activity (obsolete GO:0102603)","termid":"GO:0102603"}


id: PBO:0075781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF6 pseudogene 1","termid":"PBO:0075781"}


id: FYPO:0000364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal plasma membrane morphology during vegetative growth","synonyms":[{"name":"abnormal plasma membrane morphology during mitotic cell cycle","type":"related"},{"name":"plasma membrane morphology: abnormal","type":"related"}],"termid":"FYPO:0000364"}


id: GO:1900026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substrate adhesion-dependent cell spreading.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"is_a","term_name":"regulation of substrate adhesion-dependent cell spreading","termid":"GO:1900024"},{"relation_name":"positively_regulates","term_name":"substrate adhesion-dependent cell spreading","termid":"GO:0034446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of substrate adhesion-dependent cell spreading","synonyms":[{"name":"positive regulation of cell spreading during cell substrate adhesion","type":"exact"},{"name":"positive regulation of substrate adhesion dependent cell spreading","type":"exact"},{"name":"up regulation of cell spreading during cell substrate adhesion","type":"exact"},{"name":"up regulation of substrate adhesion dependent cell spreading","type":"exact"},{"name":"up regulation of substrate adhesion-dependent cell spreading","type":"related"}],"termid":"GO:1900026"}


id: PBO:0082761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; zinc cluster protein involved in pre-mRNA splicing and cycloheximide resistance","termid":"PBO:0082761"}


id: MONDO:0006678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A concretion in the urinary bladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lower urinary tract calculus","termid":"MONDO:0004828"},{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder calculus","secondary_identifiers":["DOID:11355","SCTID:70650003","EFO:1000839","ICD9:594.1","MedDRA:10005001","MEDGEN:14149","MESH:D001744","UMLS:C0005683"],"termid":"MONDO:0006678","xrefs":{"Monarch":{"xref_id":"0006678"}}}


id: PBO:0112986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase; catalyzes trichothecene 3-O-acetylation, suggesting a possible role in trichothecene biosynthesis; localized to peroxisomes","termid":"PBO:0112986"}


id: GO:0034555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,3'-dibromobisphenol A + 2 H+ + 2 e- = 3-monobromobisphenol A + HBr.","definition_xrefs":["UM-BBD_reactionID:r0844"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,3'-dibromobisphenol A reductive dehalogenase activity (obsolete GO:0034555)","termid":"GO:0034555"}


id: MONDO:0033334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic nose and cavum anomaly (obsolete MONDO:0033334)","secondary_identifiers":["Orphanet:435606"],"termid":"MONDO:0033334","xrefs":{"Monarch":{"xref_id":"0033334"}}}


id: MONDO:0013740
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id: PATO:0000556
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000556 thermoinsensitive (obsolete PATO:0000556)","synonyms":[{"name":"thermoresistant","type":"related"}],"termid":"PATO:0000556"}


id: GO:1903789
data:
  {"annotated_genes":["SJAG_03970","SJAG_00991","SJAG_05346","SJAG_02605","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[95191,112515,100774,93601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[93602,95192,100775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[95193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amino acid transmembrane transport.","definition_xrefs":["GO_REF:0000058","PMID:16115814","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"amino acid transmembrane transport","termid":"GO:0003333"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of amino acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of amino acid membrane transport","type":"exact"}],"termid":"GO:1903789","terms_by_termid":{"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:0000938
data:
  {"annotated_genes":["SJAG_03963","SJAG_02811","SJAG_04902","SJAG_01645"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71713,80504,81444,99034],"is_not":false,"summary":null,"term":"GO:0000938"}]},"cv_name":"cellular_component","definition":"A quatrefoil tethering complex required for retrograde traffic from the early endosome back to the late Golgi and biogenesis of cytoplasmic vesicles.","definition_xrefs":["PMID:10637310","GOC:rn","PMID:12446664","GOC:clt","PMID:12077354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"},{"relation_name":"part_of","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01645":null,"SJAG_02811":null,"SJAG_03963":null,"SJAG_04902":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005794","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GARP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi associated retrograde protein complex","type":"exact"},{"name":"VFT tethering complex","type":"exact"},{"name":"Vps fifty three tethering complex","type":"exact"}],"termid":"GO:0000938","terms_by_termid":{"GO:0000938":null}}


id: PBO:0082511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the DNA polymerase I alpha-primase complex; required for the initiation of DNA replication during mitotic DNA synthesis and premeiotic DNA synthesis","termid":"PBO:0082511"}


id: FYPO:0006790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which meiotic drive occurs to a lower extent than normal, or does not occur at all, despite the presence of a gene or allele that normally causes drive. Meiotic drive results in the unequal transmission of alleles, haplotypes, or chromosomes from a parental genome to such that are unequally represented (i.e. the \\\"driver\\\" is overrepresented) among the surviving products of meiosis.","definition_xrefs":["PomBase:mah","PMID:30475921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"meiotic drive suppression","synonyms":[{"name":"abolished meiotic drive","type":"related"},{"name":"decreased meiotic drive","type":"related"},{"name":"suppression of meiotic drive","type":"exact"}],"termid":"FYPO:0006790"}


id: PBO:0057941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3666","termid":"PBO:0057941"}


id: FYPO:0001739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pantothenate into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pantothenate import","termid":"FYPO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased pantothenate import","synonyms":[{"name":"increased pantothenate import during mitotic cell cycle","type":"related"},{"name":"increased pantothenate import during vegetative growth","type":"exact"},{"name":"increased pantothenate import into cell","type":"exact"},{"name":"increased pantothenate uptake","type":"exact"},{"name":"increased pantothenic acid import","type":"related"}],"termid":"FYPO:0001739"}


id: MONDO:0008783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tangier disease (TD) is a rare lipoprotein metabolism disorder characterized biochemically by an almost complete absence of plasma high-density lipoproteins (HDL), and clinically by liver, spleen, lymph node and tonsil enlargement along with peripheral neuropathy in children and adolescents, and, occasionally, cardiovascular disease in adults.","definition_xrefs":["Orphanet:31150"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"hypolipoproteinemia","termid":"MONDO:0001822"},{"relation_name":"is_a","term_name":"hypoalphalipoproteinemia","termid":"MONDO:0017773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"Tangier disease","secondary_identifiers":["NANDO:1200854","GARD:7731","DOID:1388","NORD:1757","OMIM:205400","NCIT:C85182","MedDRA:10051875","SCTID:723579009","MEDGEN:52644","MESH:D013631","UMLS:C0039292"],"synonyms":[{"name":"A-alphalipoprotein neuropathy","type":"related"},{"name":"ATP-binding cassette transporter A1 deficiency","type":"exact"},{"name":"Alpha high density lipoprotein deficiency disease","type":"related"},{"name":"Analphalipo-proteinemia","type":"related"},{"name":"Analphalipoproteinemia","type":"exact"},{"name":"HDL lipoprotein deficiency disease","type":"related"},{"name":"HDLDT1","type":"related"},{"name":"Tangier disease","type":"exact"},{"name":"cholesterol thesaurismosis","type":"related"},{"name":"defective adenosine triphosphate-binding cassette transporter A1","type":"exact"},{"name":"familial Hypoalphalipo-proteinemia","type":"related"},{"name":"familial alpha-lipoprotein deficiency","type":"exact"},{"name":"familial high density lipoprotein deficiency","type":"exact"},{"name":"familial high density lipoprotein deficiency disease","type":"related"},{"name":"high density lipoprotein deficiency, Tangier type","type":"related"},{"name":"high density lipoprotein deficiency, type 1","type":"related"},{"name":"tgd","type":"related"}],"termid":"MONDO:0008783","xrefs":{"Monarch":{"xref_id":"0008783"}}}


id: PBO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 3 (predicted)","termid":"PBO:0000350"}


id: FYPO:0006952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of N2-acetyl-L-lysine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular N2-acetyl-L-lysine level","synonyms":[{"name":"increased N2-acetyl-L-lysine accumulation","type":"related"},{"name":"increased cellular N2-acetyl-L-lysine level during mitotic cell cycle","type":"related"},{"name":"increased cellular N2-acetyl-L-lysine level during vegetative growth","type":"exact"},{"name":"increased cellular N2-acetyl-lysine level","type":"exact"}],"termid":"FYPO:0006952"}


id: MONDO:0025030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Highly contagious infectious dermatitis with lesions near the interdigital spaces usually in cattle. It causes discomfort and often severe lameness (lameness, animal). Lesions can be either erosive or proliferative and wart-like with papillary growths and hypertrophied hairs. dichelobacter nodosus and treponema are the most commonly associated causative agents for this mixed bacterial infection disease.","definition_xrefs":["MESH:D058066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection, non-human animal","termid":"MONDO:0700109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digital dermatitis in cattle","synonyms":[{"name":"Dermatitides, bovine digital","type":"related"},{"name":"Dermatitides, digital","type":"related"},{"name":"Ovine digital Dermatitides","type":"related"},{"name":"Ovine digital dermatitis","type":"related"},{"name":"Papillomatoses, digital","type":"related"},{"name":"Warts, bovine foot","type":"related"},{"name":"bovine digital Dermatitides","type":"related"},{"name":"bovine digital dermatitis","type":"related"},{"name":"bovine foot Warts","type":"related"},{"name":"bovine foot wart","type":"related"},{"name":"bovine hairy footwart","type":"related"},{"name":"bovine hairy footwarts","type":"related"},{"name":"dermatitis, bovine digital","type":"related"},{"name":"dermatitis, digital","type":"related"},{"name":"digital Dermatitides","type":"related"},{"name":"digital Dermatitides, Ovine","type":"related"},{"name":"digital Dermatitides, bovine","type":"related"},{"name":"digital Dermatitides, papillomatous","type":"related"},{"name":"digital Papillomatoses","type":"related"},{"name":"digital dermatitis, Ovine","type":"related"},{"name":"digital dermatitis, bovine","type":"related"},{"name":"digital dermatitis, papillomatous","type":"related"},{"name":"digital papillomatosis","type":"related"},{"name":"foot Warts, bovine","type":"related"},{"name":"foot wart, bovine","type":"related"},{"name":"footwart, bovine hairy","type":"related"},{"name":"footwarts, bovine hairy","type":"related"},{"name":"hairy footwart, bovine","type":"related"},{"name":"hairy footwarts, bovine","type":"related"},{"name":"papillomatosis, digital","type":"related"},{"name":"papillomatous digital Dermatitides","type":"related"},{"name":"papillomatous digital dermatitis","type":"related"},{"name":"wart, bovine foot","type":"related"}],"termid":"MONDO:0025030","xrefs":{"Monarch":{"xref_id":"0025030"}}}


id: GO:1902806
data:
  {"annotated_genes":["SJAG_02404","SJAG_02723","SJAG_01210","SJAG_00071","SJAG_03699","SJAG_03048","SJAG_05346","SJAG_01311","SJAG_03681","SJAG_01401","SJAG_02026","SJAG_02810","SJAG_00996","SJAG_00169","SJAG_00991","SJAG_04140","SJAG_03591","SJAG_01825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90783,104276,117905,103537,110856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[93161,111642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[94018,93599,95189,100771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"},{"annotations":[119083,107755,104291,107918,108604,111154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[93605,110862,76756,117907,117340,78514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any signaling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle phase transition","termid":"GO:1901987"},{"relation_name":"regulates","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02026":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1902806","terms_by_termid":{"GO:0007089":null,"GO:0031568":null,"GO:0031571":null,"GO:1900087":null,"GO:2000134":null}}


id: GO:0050281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + glyoxylate = 3-hydroxypyruvate + glycine.","definition_xrefs":["EC:2.6.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"L-serine-glyoxylate transaminase activity","secondary_identifiers":["MetaCyc:SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN","RHEA:19125"],"synonyms":[{"name":"L-serine:glyoxylate aminotransferase activity","type":"related"},{"name":"SGAT activity","type":"related"},{"name":"serine--glyoxylate aminotransferase activity","type":"exact"}],"termid":"GO:0050281"}


id: PBO:0089583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor Ell1","termid":"PBO:0089583"}


id: PBO:0044001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and Sushi multiple domains 1","termid":"PBO:0044001"}


id: GO:0021542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hippocampus development","termid":"GO:0021766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dentate gyrus development","termid":"GO:0021542"}


id: GO:0004159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydropyrimidine (5,6-dihydrouracil or 5,6-dihydrothymine) + NAD+ = a pyrimidine (uracil or thymine) + NADH + H+.","definition_xrefs":["PMID:23150645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydropyrimidine dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.3.1.1","MetaCyc:DIHYDROURACIL-DEHYDROGENASE-NAD+-RXN"],"synonyms":[{"name":"5,6-dihydrouracil:NAD+ oxidoreductase activity","type":"related"},{"name":"dihydrothymine dehydrogenase (NAD+) activity","type":"narrow"},{"name":"dihydrouracil dehydrogenase (NAD+) activity","type":"narrow"},{"name":"pyrimidine reductase activity","type":"related"},{"name":"thymine reductase activity","type":"narrow"},{"name":"uracil reductase activity","type":"narrow"}],"termid":"GO:0004159"}


id: PBO:0077139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TJAP1 pseudogene 1","termid":"PBO:0077139"}


id: PBO:0075988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starch binding domain 1","termid":"PBO:0075988"}


id: GO:0050165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pantetheine = ADP + pantetheine 4'-phosphate.","definition_xrefs":["EC:2.7.1.34","MetaCyc:PANTETHEINE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"pantetheine kinase activity","secondary_identifiers":["RHEA:22472"],"synonyms":[{"name":"ATP:pantetheine 4'-phosphotransferase activity","type":"related"},{"name":"pantetheine kinase (phosphorylating)","type":"related"}],"termid":"GO:0050165"}


id: PATO:0001281
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated purple","synonyms":[{"name":"bright purple","type":"related"}],"termid":"PATO:0001281"}


id: PBO:0108920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIPIN pseudogene 2","termid":"PBO:0108920"}


id: GO:0033748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2 + A = AH2.","definition_xrefs":["EC:1.12.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydrogenase (acceptor) activity","secondary_identifiers":["RHEA:12116","MetaCyc:RXN0-4141"],"synonyms":[{"name":"H2 producing hydrogenase activity","type":"broad"},{"name":"hydrogen-lyase activity","type":"broad"},{"name":"hydrogen:(acceptor) oxidoreductase activity","type":"related"},{"name":"hydrogen:acceptor oxidoreductase activity","type":"related"},{"name":"hydrogenlyase activity","type":"broad"},{"name":"uptake hydrogenase activity","type":"broad"}],"termid":"GO:0033748"}


id: PBO:0083671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum transmembrane protein; may interact with ribosomes, based on co-purification experiments; homolog of human BAP31 protein; YET1 has a paralog, YET2, that arose from the whole genome duplication","termid":"PBO:0083671"}


id: PBO:0077032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 1","termid":"PBO:0077032"}


id: MONDO:0018908
data:
  {"annotated_genes":["SJAG_00980","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88015,88014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"}]},"cv_name":"mondo","definition":"Distinct from Hodgkin lymphoma both morphologically and biologically, non-Hodgkin lymphoma (NHL) is characterized by the absence of Reed-Sternberg cells, can occur at any age, and usually presents as a localized or generalized lymphadenopathy associated with fever and weight loss. The clinical course varies according to the morphologic type. NHL is clinically classified as indolent, aggressive, or having a variable clinical course. NHL can be of B-or T-/NK-cell lineage.","definition_xrefs":["NCIT:C3211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_02460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"non-Hodgkin lymphoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0024305","DOID:0060060","EFO:0005952","MedDRA:10029547","ICDO:9591/3","MEDGEN:6160","MESH:D008228","ONCOTREE:NHL","Orphanet:547"],"synonyms":[{"name":"NHL","type":"exact"},{"name":"non-Hodgkin lymphoma","type":"exact"},{"name":"non-Hodgkin's lymphoma","type":"exact"},{"name":"non-Hodgkin's lymphoma (NHL)","type":"exact"},{"name":"non-Hodgkins lymphoma","type":"exact"}],"termid":"MONDO:0018908","terms_by_termid":{"MONDO:0011508":null},"xrefs":{"Monarch":{"xref_id":"0018908"}}}


id: PBO:0060349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO16 antisense RNA 1","termid":"PBO:0060349"}


id: GO:0005346
data:
  {"annotated_genes":["SJAG_02050","SJAG_00612","SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[103279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[59110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[104778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a purine ribonucleotide, any compound consisting of a purine ribonucleoside (a purine organic base attached to a ribose sugar) esterified with (ortho)phosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transmembrane transporter activity","termid":"GO:0015216"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null,"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"purine ribonucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0005346","terms_by_termid":{"GO:0005471":null,"GO:0046964":null,"GO:0140987":null,"GO:1902557":null}}


id: MONDO:0011972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complication of ovulation induction in infertility treatment. It is graded by the severity of symptoms which include ovary enlargement, multiple ovarian follicles; ovarian cysts; ascites; and generalized edema. The full-blown syndrome may lead to renal failure, respiratory distress, and even death. Increased capillary permeability is caused by the vasoactive substances, such as vascular endothelial growth factors, secreted by the overly-stimulated ovaries.","definition_xrefs":["MESH:D016471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian hyperstimulation syndrome","secondary_identifiers":["MedDRA:10033266","MEDGEN:38966","icd11.foundation:1216664013","DOID:5425","UMLS:C0085083","OMIM:608115","ICD9:256.1","SCTID:129635004","GARD:16668","Orphanet:64739"],"synonyms":[{"name":"OHSS","type":"exact"},{"name":"ovarian hyperstimulation syndrome","type":"exact"},{"name":"ovarian hyperstimulation syndrome, familial gestational spontaneous","type":"related"},{"name":"secondary Meig's syndrome","type":"exact"}],"termid":"MONDO:0011972","xrefs":{"Monarch":{"xref_id":"0011972"}}}


id: GO:0030745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + N-alpha,N-alpha-dimethyl-L-histidine = S-adenosyl-L-homocysteine + N-alpha,N-alpha,N-alpha-trimethyl-L-histidine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylhistidine N-methyltransferase activity (obsolete GO:0030745)","termid":"GO:0030745"}


id: MONDO:0859377
data:
  {"annotated_genes":["SJAG_05209"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87413],"is_not":false,"summary":null,"term":"MONDO:0859377"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with poor growth and behavioral abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830273","DOID:0081444","OMIM:620242","MEDGEN:1840909"],"termid":"MONDO:0859377","terms_by_termid":{"MONDO:0859377":null},"xrefs":{"Monarch":{"xref_id":"0859377"}}}


id: PBO:0046349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 7","termid":"PBO:0046349"}


id: GO:0048212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which Golgi vesicle coat proteins are depolymerized, and released for reuse.","definition_xrefs":["PMID:10219233","GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle uncoating","termid":"GO:0072319"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"Golgi vesicle uncoating","synonyms":[{"name":"Golgi vesicle coat depolymerization","type":"exact"},{"name":"Golgi vesicle coat protein depolymerization","type":"exact"},{"name":"Golgi-derived vesicle uncoating","type":"exact"},{"name":"dictyosome vesicle coat depolymerization","type":"narrow"}],"termid":"GO:0048212"}


id: MONDO:1010827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndactyly that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndactyly, non-human animal","termid":"MONDO:1010160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly, cattle","secondary_identifiers":["OMIA:000963-9913"],"termid":"MONDO:1010827","xrefs":{"Monarch":{"xref_id":"1010827"}}}


id: MONDO:0006609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excessive shedding of dry scaly material from the scalp in humans.","definition_xrefs":["MESH:D063807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seborrheic dermatitis","termid":"MONDO:0006608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"seborrheic infantile dermatitis","secondary_identifiers":["SCTID:400201008","DOID:8941","ICD9:690.11"],"synonyms":[{"name":"Seborrhoea capitis","type":"exact"},{"name":"Seborrhoeic dermatitis of scalp","type":"exact"},{"name":"Seborrhoeic eczema of scalp","type":"exact"},{"name":"complement 5 dysfunction","type":"exact"},{"name":"cradle cap","type":"exact"},{"name":"generalised seborrheic dermatitis of infants","type":"exact"},{"name":"generalized seborrheic dermatitis of infants","type":"exact"},{"name":"infantile seborrheic dermatitis","type":"exact"},{"name":"infantile seborrhoeic dermatitis","type":"exact"},{"name":"pityriasis capitis","type":"related"},{"name":"scalp seborrheic dermatitis (disease)","type":"exact"},{"name":"seborrhea capitis","type":"exact"},{"name":"seborrhea sicca","type":"exact"},{"name":"seborrheic dermatitis (disease) of scalp","type":"exact"}],"termid":"MONDO:0006609","xrefs":{"Monarch":{"xref_id":"0006609"}}}


id: PATO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disfunctional quality held by the bearer when the latter is unable to perform a regular function(s).","definition_xrefs":["PATC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-functional","secondary_identifiers":["PATO:0001640"],"synonyms":[{"name":"defective","type":"related"},{"name":"disfunctional","type":"exact"},{"name":"failure","type":"related"},{"name":"functional failure","type":"exact"}],"termid":"PATO:0001511"}


id: PBO:0062088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 19 pseudogene","termid":"PBO:0062088"}


id: SO:0000599
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000599 edited_by_C_to_U_substitution (obsolete SO:0000599)","termid":"SO:0000599"}


id: PBO:0058765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6889","termid":"PBO:0058765"}


id: GO:0020035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adherence of symbiont-infected erythrocytes to microvascular endothelium via symbiont proteins embedded in the membrane of the erythrocyte.","definition_xrefs":["GOC:mb","PMID:10362584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to microvasculature","secondary_identifiers":["GO:0043706"],"synonyms":[{"name":"cytoadherence to microvasculature, mediated by parasite protein","type":"narrow"},{"name":"cytoadherence to microvasculature, mediated by symbiont protein","type":"exact"},{"name":"heterophilic cell adhesion involved in cytoadherence to microvasculature, mediated by parasite protein","type":"narrow"},{"name":"parasite-protein-mediated cytoadherence to microvasculature","type":"narrow"},{"name":"symbiont-protein-mediated cytoadherence to microvasculature","type":"broad"}],"termid":"GO:0020035"}


id: GO:0003680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA structure formed by the minor groove of adenine-thymine-rich DNA regions. Examples of proteins having this function are AT-rich interaction domain (ARID)-containing proteins.","definition_xrefs":["PMID:15802641","PMID:26223912","GOC:jl","PMID:10545119","PMID:2670564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"minor groove of adenine-thymine-rich DNA binding","synonyms":[{"name":"AT DNA binding","type":"exact"},{"name":"AT binding","type":"exact"},{"name":"AT-rich DNA binding","type":"exact"}],"termid":"GO:0003680"}


id: PATO:0000057
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's occurrence.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurrence","secondary_identifiers":["PATO:0000158","PATO:0000156"],"synonyms":[{"name":"incidence","type":"exact"},{"name":"temporal","type":"broad"}],"termid":"PATO:0000057"}


id: PBO:0090705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ser) residue 32 (cytosine-3-)-methyltransferase Trm141","termid":"PBO:0090705"}


id: GO:0044788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism modulates the frequency, rate or extent of any of a process being mediated by a virus with which it is infected.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral process","termid":"GO:0044788"}


id: PBO:0082878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cu(+2)-transporting P-type ATPase; required for export of copper from the cytosol into an extracytosolic compartment; similar to human proteins involved in Menkes and Wilsons diseases; protein abundance increases in response to DNA replication stress; affects TBSV model (+)RNA virus replication by regulating copper metabolism; human homologs ATP7A and ATP7B both complement yeast null mutant","termid":"PBO:0082878"}


id: FYPO:0001058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased amino acid import","synonyms":[{"name":"decreased amino acid import across plasma membrane","type":"exact"},{"name":"decreased amino acid import into cell","type":"exact"},{"name":"decreased amino acid uptake","type":"exact"},{"name":"reduced amino acid import","type":"exact"}],"termid":"FYPO:0001058"}


id: GO:0035868
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to high mobility group box 1 protein.","definition_xrefs":["GOC:BHF","GOC:ebc","PMID:20826760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphav-beta3 integrin-HMGB1 complex","synonyms":[{"name":"alphav-beta3 integrin-high mobility group box 1 complex","type":"exact"}],"termid":"GO:0035868"}


id: PBO:0046098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 1","termid":"PBO:0046098"}


id: PBO:0091709
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ask2 is the name which was given to the spurious ORF on the opposite strand","termid":"PBO:0091709"}


id: PBO:0090640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, NAD Yea6","termid":"PBO:0090640"}


id: PBO:0030377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_diamide","termid":"PBO:0030377"}


id: PBO:0047421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 11","termid":"PBO:0047421"}


id: PBO:0091291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha (eEF1A) lysine 390 methyltransferase Efm6","termid":"PBO:0091291"}


id: PBO:0082806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U4/U6-U5 snRNP complex; involved in second catalytic step of splicing; participates in spliceosomal assembly through its interaction with U1 snRNA; largest and most evolutionarily conserved protein of the spliceosome; mutations in human ortholog, PRPF8, cause Retinitis pigmentosa and missplicing in Myelodysplastic syndrome; mouse ortholog interacts with androgen receptor and may have a role in prostate cancer","termid":"PBO:0082806"}


id: MONDO:0014642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chronic mucocutaneous candidiasis in which the cause of the disease is a mutation in the IL17RC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"candidiasis, familial, 9","secondary_identifiers":["OMIM:616445","UMLS:C4225324","MEDGEN:906897","GARD:16114"],"synonyms":[{"name":"CANDF9","type":"related"},{"name":"IL17RC chronic mucocutaneous candidiasis (disease)","type":"exact"},{"name":"candidiasis, familial, 9","type":"exact"},{"name":"candidiasis, familial, type 9","type":"exact"},{"name":"chronic mucocutaneous candidiasis (disease) caused by mutation in IL17RC","type":"exact"}],"termid":"MONDO:0014642","xrefs":{"Monarch":{"xref_id":"0014642"}}}


id: PBO:0086401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative endonuclease; has a domain similar to a magnesium-dependent endonuclease motif in mRNA deadenylase Ccr4p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086401"}


id: PBO:0052324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1522","termid":"PBO:0052324"}


id: PBO:0088578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphoryl diester phosphodiesterase Gde1","termid":"PBO:0088578"}


id: PBO:0046468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erb-b2 receptor tyrosine kinase 2","termid":"PBO:0046468"}


id: MONDO:0859267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive cancer predisposition syndrome characterized by the onset of various types of tumors or malignancies in young adulthood. The most common clinical manifestations include acute myeloid leukemia (AML), myelodysplastic syndrome, colorectal adenomatous polyposis and carcinoma, and uveal melanoma.","definition_xrefs":["OMIM:619975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor predisposition syndrome 2","secondary_identifiers":["MEDGEN:1823959","Orphanet:661526","UMLS:C5774186"],"synonyms":[{"name":"MANS","type":"exact"},{"name":"MBD4-associated neoplasia syndrome","type":"exact"},{"name":"MBD4-related recessive tumor predisposition syndrome","type":"exact"},{"name":"TPDS2","type":"exact"}],"termid":"MONDO:0859267","xrefs":{"Monarch":{"xref_id":"0859267"}}}


id: GO:1902473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to synapse.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:22588719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to synapse","synonyms":[{"name":"regulation of protein localisation to synapse","type":"exact"}],"termid":"GO:1902473"}


id: MONDO:0002241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired or inherited coagulation disorder due to reduced levels and activity of factor XIII.","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor XIII deficiency","secondary_identifiers":["MEDGEN:1385982","MESH:D005177","UMLS:C4316906","NANDO:2200681"],"synonyms":[{"name":"FXIIID","type":"exact"}],"termid":"MONDO:0002241","xrefs":{"Monarch":{"xref_id":"0002241"}}}


id: PBO:0061525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal vesicle trafficking associated 1","termid":"PBO:0061525"}


id: GO:0102948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(3,4-dihydroxyphenyl)-5-hydroxy-4-oxo-4H-chromen-7-olate luteolin-7-olate + a glucosylated glucose acceptor = isoorientin + a non glucosylated glucose acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete luteolin C-glucosyltransferase activity (obsolete GO:0102948)","termid":"GO:0102948"}


id: PBO:0090490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, Ssa-like","termid":"PBO:0090490"}


id: PBO:0053629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 674","termid":"PBO:0053629"}


id: MONDO:0016854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"49, XXXYY syndrome is a chromosome abnormality that occurs when a male inherits two extra copies of the X chromosome and one extra copy of the Y chromosome. The condition is extremely rare with only a handful of cases reported in the medical literature. Signs and symptoms associated with these cases include severe intellectual disability, distinctive facial features, normal to tall stature, gynecomastia, hypogonadism, and behavioral abnormalities. 49, XXXYY syndrome is likely caused by a mistake (called nondisjunction) that occurs at conception or during the formation of the sperm and/or egg. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"},{"relation_name":"is_a","term_name":"aneuploidy","termid":"MONDO:0700064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"49,XXXYY syndrome","secondary_identifiers":["UMLS:C4749586","MEDGEN:1667231","GARD:10922","Orphanet:261534"],"synonyms":[{"name":"49, XXXYY syndrome","type":"related"},{"name":"XXXYY syndrome","type":"related"}],"termid":"MONDO:0016854","xrefs":{"Monarch":{"xref_id":"0016854"}}}


id: PBO:0060255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCN opposite strand","termid":"PBO:0060255"}


id: PBO:0065655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type F","termid":"PBO:0065655"}


id: MONDO:1011569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, crab-eating macaque","secondary_identifiers":["OMIA:000181-9541"],"termid":"MONDO:1011569","xrefs":{"Monarch":{"xref_id":"1011569"}}}


id: MONDO:0012357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any open-angle glaucoma in which the cause of the disease is a mutation in the WDR36 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"gene_count":0,"genotype_count":0,"name":"obsolete glaucoma 1, open angle, G (obsolete MONDO:0012357)","secondary_identifiers":["MESH:C563692","OMIM:609887"],"synonyms":[{"name":"GLC1G","type":"related"},{"name":"WDR36 open-angle glaucoma","type":"exact"},{"name":"glaucoma 1, open angle, G","type":"exact"},{"name":"glaucoma 1, open angle, type G","type":"exact"},{"name":"open-angle glaucoma caused by mutation in WDR36","type":"exact"}],"termid":"MONDO:0012357","xrefs":{"Monarch":{"xref_id":"0012357"}}}


id: MONDO:0957875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant 11","secondary_identifiers":["OMIM:620528","DOID:0081400","MEDGEN:1849676","UMLS:C5882697"],"termid":"MONDO:0957875","xrefs":{"Monarch":{"xref_id":"0957875"}}}


id: GO:1990213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of salicylic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17722699","PMID:20565685","GOC:ml"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of salicylic acid levels in host (obsolete GO:1990213)","termid":"GO:1990213"}


id: MONDO:0013437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PDE6A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PDE6A-related retinopathy","termid":"MONDO:0700224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 43","secondary_identifiers":["DOID:0110379","ICD10CM:H35.5","GARD:15716","MEDGEN:462489","OMIM:613810","UMLS:C3151139"],"synonyms":[{"name":"PDE6A retinitis pigmentosa","type":"exact"},{"name":"RP43","type":"exact"},{"name":"retinitis pigmentosa 43","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PDE6A","type":"exact"},{"name":"retinitis pigmentosa type 43","type":"exact"}],"termid":"MONDO:0013437","xrefs":{"Monarch":{"xref_id":"0013437"}}}


id: PBO:0074542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal nuclease and tudor domain containing 1","termid":"PBO:0074542"}


id: PBO:0087634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; loss results in a defect in vacuolar acidification","termid":"PBO:0087634"}


id: GO:0051711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the killing by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell killing","termid":"GO:0031342"},{"relation_name":"is_a","term_name":"regulation of killing of cells of another organism","termid":"GO:0051709"},{"relation_name":"negatively_regulates","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of killing of cells of another organism","secondary_identifiers":["GO:0052490","Reactome:R-HSA-9662851"],"synonyms":[{"name":"down regulation of killing of cells of another organism","type":"exact"},{"name":"down-regulation of killing of cells of another organism","type":"exact"},{"name":"downregulation of killing of cells of another organism","type":"exact"},{"name":"inhibition of killing of cells of another organism","type":"narrow"},{"name":"negative regulation of killing of cells of other organism","type":"exact"}],"termid":"GO:0051711"}


id: MONDO:0019867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 8 is a chromosomal disorder defined by the presence of three copies of chromosome 8 in some cells of the organism. It is characterized by facial dysmorphism, mild intellectual deficit and joint, urinary, cardiac and skeletal anomalies.","definition_xrefs":["Orphanet:96061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 8, trisomy","termid":"MONDO:0043452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 8","secondary_identifiers":["MedDRA:10053916","SCTID:717335009","GARD:5359","UMLS:C1096527","MEDGEN:797340","MESH:C537940"],"synonyms":[{"name":"Mosaic trisomy chromosome 8","type":"related"},{"name":"Mosaic trisomy type 8","type":"exact"},{"name":"Warkany syndrome","type":"exact"},{"name":"trisomy 8 mosaicism","type":"related"}],"termid":"MONDO:0019867","xrefs":{"Monarch":{"xref_id":"0019867"}}}


id: GO:0051853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an associated organism causes the formation of an abnormal mass of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction in symbiont of tumor, nodule, or growth (obsolete GO:0051853)","synonyms":[{"name":"induction in symbiont of tumor, nodule, or growth","type":"exact"}],"termid":"GO:0051853"}


id: GO:0070563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the vitamin D receptor signaling pathway activity.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin D receptor signaling pathway","termid":"GO:0070562"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"vitamin D receptor signaling pathway","termid":"GO:0070561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of vitamin D receptor signaling pathway","synonyms":[{"name":"down regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"down-regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"downregulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"inhibition of vitamin D receptor signaling pathway","type":"narrow"},{"name":"negative regulation of VDR signaling pathway","type":"exact"},{"name":"negative regulation of VDR signalling pathway","type":"exact"},{"name":"negative regulation vitamin D receptor signalling pathway","type":"exact"}],"termid":"GO:0070563"}


id: PBO:0054194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1569","termid":"PBO:0054194"}


id: PATO:0000446
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000446 absolute percentage value (obsolete PATO:0000446)","termid":"PATO:0000446"}


id: FYPO:0007329
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of DNA damage measured at transfer RNA genes in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PMID:31833215","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage at tRNA genes","synonyms":[{"name":"increased DNA damage at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased DNA damage at tRNA genes during vegetative growth","type":"exact"},{"name":"increased DNA damage at transfer RNA genes","type":"exact"},{"name":"increased number of DNA lesions at tRNA genes during vegetative growth","type":"related"}],"termid":"FYPO:0007329"}


id: FYPO:0002193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, contains one or more septa, is shaped in the form of a spheroid, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal volume vegetative cell","termid":"FYPO:0000926"},{"relation_name":"has_part","term_name":"spheroid cell","termid":"FYPO:0001955"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"normal volume vegetative cell","termid":"FYPO:0000926"},{"relation_name":"is_a","term_name":"inviable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001511"},{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable normal volume septated spheroid vegetative cell","synonyms":[{"name":"inviable normal volume septated rounded vegetative cell","type":"related"},{"name":"inviable normal volume septated spheroid cell during vegetative growth","type":"exact"},{"name":"inviable normal volume septated spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; normal volume septated spheroid vegetative cell","type":"exact"}],"termid":"FYPO:0002193"}


id: GO:0010817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the levels of hormone within an organism or a tissue. A hormone is any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hormone levels","termid":"GO:0010817"}


id: PBO:0072415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 20","termid":"PBO:0072415"}


id: GO:1903055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["GOC:TermGenie","PMID:22357537","GOC:BHF","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"positively_regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix organization","synonyms":[{"name":"activation of extracellular matrix organisation","type":"narrow"},{"name":"activation of extracellular matrix organization","type":"narrow"},{"name":"activation of extracellular matrix organization and biogenesis","type":"related"},{"name":"positive regulation of extracellular matrix organisation","type":"exact"},{"name":"positive regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up regulation of extracellular matrix organisation","type":"exact"},{"name":"up regulation of extracellular matrix organization","type":"exact"},{"name":"up regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up-regulation of extracellular matrix organisation","type":"exact"},{"name":"up-regulation of extracellular matrix organization","type":"exact"},{"name":"up-regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"upregulation of extracellular matrix organisation","type":"exact"},{"name":"upregulation of extracellular matrix organization","type":"exact"},{"name":"upregulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903055"}


id: PBO:0085928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cytosol; identical to Pau22p; encodes two proteins that are translated from 2 different start codons","termid":"PBO:0085928"}


id: PBO:0053369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 290","termid":"PBO:0053369"}


id: MONDO:0800486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders that affect the bones secondary to increased levels of minerals or deficient levels of minerals such as calcium, magnesium, phosphorus, and vitamin D. Representative examples are osteomalacia, osteoporosis, and Paget disease.","definition_xrefs":["NCIT:C97045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic bone disorder","secondary_identifiers":["MEDGEN:2699","UMLS:C0005944"],"termid":"MONDO:0800486","xrefs":{"Monarch":{"xref_id":"0800486"}}}


id: PBO:0108564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin Cnt5","termid":"PBO:0108564"}


id: PBO:0051312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-6 (pseudogene)","termid":"PBO:0051312"}


id: SO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located in the intergenic region, between genes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:intergenic","type":"related"},{"name":"Jannovar:intergenic_variant","type":"exact"},{"name":"Seattleseq:intergenic","type":"exact"},{"name":"VEP:intergenic_variant","type":"exact"},{"name":"intergenic","type":"exact"},{"name":"intergenic variant","type":"exact"},{"name":"snpEff:INTERGENIC","type":"exact"}],"termid":"SO:0001628"}


id: MONDO:0851102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary artery disease","secondary_identifiers":["DOID:60001"],"termid":"MONDO:0851102","xrefs":{"Monarch":{"xref_id":"0851102"}}}


id: GO:0140615
data:
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