# terms

id: PBO:0016989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase Afg1 (predicted)","termid":"PBO:0016989"}


id: MONDO:0020478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leber `plus' disease describes patients with the clinical features of Leber's hereditary optic neuropathy (LHON) in combination with other serious systemic or neurological abnormalities. These abnormalities include: postural tremor, motor disorder, multiple sclerosis-like syndrome, spinal cord disease, skeletal changes, Parkinsonism with dystonia, anarthria, dystonia, motor and sensory peripheral neuropathy, spasticity and mild encephalopathy. It is caused by maternally-inherited mitochondrial DNA (mtDNA) mutations.","definition_xrefs":["Orphanet:99718"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"excluded_subClassOf","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"Leber plus disease","secondary_identifiers":["DOID:0111754","MEDGEN:930394","SCTID:719430008","UMLS:C4304725","GARD:8476","ICD10CM:H47.2"],"synonyms":[{"name":"LHON plus disease","type":"exact"}],"termid":"MONDO:0020478","xrefs":{"Monarch":{"xref_id":"0020478"}}}


id: GO:0097570
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The specialized envelope lying outside the cell membrane of a cyst. A cyst is a resting or dormant stage of a microorganism, usually a bacterium or a protist or rarely an invertebrate animal, that helps the organism to survive in unfavorable environmental conditions. In protists such as protozoan parasites alternating cystic- and non-cystic stages, the cyst wall is usually composed of carbohydrates and proteins.","definition_xrefs":["Wikipedia:Microbial_cyst","PMID:2026212","GOC:giardia","PMID:15134259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"cyst wall","termid":"GO:0097570"}


id: PBO:0041997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 43","termid":"PBO:0041997"}


id: PBO:0082449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-22 sterol desaturase; a cytochrome P450 enzyme that catalyzes the formation of the C-22(23) double bond in the sterol side chain in ergosterol biosynthesis; may be a target of azole antifungal drugs","termid":"PBO:0082449"}


id: PR:Q9P7C9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nhm1 gene.","definition_xrefs":["UniProtKB:Q9P7C9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m7GpppX diphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.20","synonyms":[{"name":"Hint-related 7meGMP-directed hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nhm1","type":"exact"},{"name":"nuclear histidine triad (HIT) motif protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"scavenger mRNA-decapping enzyme DcpS (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7C9"}


id: MOD:00422
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a morpholine-2-acetyl group.","definition_xrefs":["Unimod:29#N-term","PubMed:10446193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"},{"relation_name":"is_a","term_name":"morpholine-2-acetylated residue","termid":"MOD:01813"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino morpholine-2-acetylated residue","synonyms":[{"name":"N-Succinimidyl-2-morpholine acetate","type":"related"},{"name":"N-succinimidylmorpholine-2-acetate alpha-amino derivative","type":"exact"},{"name":"SMA","type":"related"}],"termid":"MOD:00422"}


id: GO:0018668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzoate + H+ + NADPH + O2 = 3,4-dihydroxybenzoate + H2O + NADP+.","definition_xrefs":["EC:1.14.13.23","RHEA:11480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-hydroxybenzoate 4-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R01628","MetaCyc:3-HYDROXYBENZOATE-4-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0153"],"synonyms":[{"name":"3-hydroxybenzoate 4-hydroxylase activity","type":"exact"},{"name":"3-hydroxybenzoate,NADPH:oxygen oxidoreductase (4-hydroxylating)","type":"related"}],"termid":"GO:0018668"}


id: PBO:0060224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix remodeling associated 5 Y-linked (pseudogene)","termid":"PBO:0060224"}


id: MONDO:0015060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 3 is a rare chromosomal anomaly syndrome with high phenotypic variability ranging from a mild phenotype presenting joint pain and laxity, mild facial dysmorphism (e.g. long facies, prominent eyes, dysplastic ears, downturned corners of the mouth, micrognathia) and no developmental delays to more severe phenotypes including short stature, intellectual disability, severe developmental delays, additional craniofacial dysmorphic features (e.g. brachycephaly, high forehead, flat midface, short neck) and hearing impairment, as well as skeletal (e.g. pectus excavatum, scoliosis), ocular (e.g. coloboma) and cardiac abnormalities.","definition_xrefs":["Orphanet:100071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 3 disorder","termid":"MONDO:0700010"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 3","secondary_identifiers":["GARD:5342","MEDGEN:1646607","SCTID:764627005","UMLS:C4707012"],"synonyms":[{"name":"Mosaic trisomy chromosome 3","type":"exact"},{"name":"Mosaic trisomy type 3","type":"exact"},{"name":"trisomy 3 mosaicism","type":"exact"}],"termid":"MONDO:0015060","xrefs":{"Monarch":{"xref_id":"0015060"}}}


id: PBO:0109137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3039","termid":"PBO:0109137"}


id: MONDO:1040003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder caused by variation in the KCND2 gene. This disorder is characterized by early-onset global developmental delay with impaired motor, speech and cognitive development. Patients often present muscle hypotonia, and less frequently, developmental epileptic encephalopathy, visual impairment and physical dysmorphisms.","definition_xrefs":["PMID:34245260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"KCND2-related neurodevelopmental disorder with or without seizures","termid":"MONDO:1040003","xrefs":{"Monarch":{"xref_id":"1040003"}}}


id: GO:0032552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a deoxyribonucleotide, any compound consisting of a deoxyribonucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"deoxyribonucleotide binding","termid":"GO:0032552"}


id: GO:1901233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in axis elongation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in axis elongation","termid":"GO:1901232"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in axis elongation","termid":"GO:0060028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in axis elongation","synonyms":[{"name":"down regulation of convergent extension involved in axis elongation","type":"exact"},{"name":"down-regulation of convergent extension involved in axis elongation","type":"exact"},{"name":"downregulation of convergent extension involved in axis elongation","type":"exact"},{"name":"inhibition of convergent extension involved in axis elongation","type":"narrow"}],"termid":"GO:1901233"}


id: PBO:0089912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Sal3","termid":"PBO:0089912"}


id: MONDO:1011798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forelimb-girdle muscular anomaly, non-human animal","secondary_identifiers":["OMIA:001442"],"termid":"MONDO:1011798","xrefs":{"Monarch":{"xref_id":"1011798"}}}


id: PBO:0026739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ethionine","termid":"PBO:0026739"}


id: PBO:0054954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2368","termid":"PBO:0054954"}


id: PBO:0060174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTUS2 antisense RNA 1","termid":"PBO:0060174"}


id: MONDO:0013980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"punctate palmoplantar keratoderma type 1","termid":"MONDO:0019332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma, punctate type ib","secondary_identifiers":["OMIM:614936","GARD:15884","UMLS:C3554145","MEDGEN:767059"],"synonyms":[{"name":"PPKP1B","type":"exact"},{"name":"keratoderma, palmoplantar, punctate type IB","type":"exact"},{"name":"palmoplantar keratoderma, punctate type IB","type":"related"}],"termid":"MONDO:0013980","xrefs":{"Monarch":{"xref_id":"0013980"}}}


id: PBO:0046892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM13B antisense RNA 1","termid":"PBO:0046892"}


id: PBO:0011962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"other","termid":"PBO:0011962"}


id: PBO:0028572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase_without_septation","termid":"PBO:0028572"}


id: PBO:0083189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YJL225C","termid":"PBO:0083189"}


id: MONDO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the soft palate.","definition_xrefs":["NCIT:C3529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oropharynx cancer","termid":"MONDO:0004608"},{"relation_name":"is_a","term_name":"palatal neoplasm","termid":"MONDO:0005286"},{"relation_name":"is_a","term_name":"oral cavity cancer","termid":"MONDO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"soft palate cancer","secondary_identifiers":["SCTID:363388009","ICD9:145.3","DOID:8578","ICD10CM:C05.1","UMLS:C0153376","MEDGEN:57552"],"synonyms":[{"name":"cancer of soft palate","type":"exact"},{"name":"malignant neoplasm of soft palate","type":"exact"},{"name":"malignant neoplasm of the soft palate","type":"exact"},{"name":"malignant soft palate neoplasm","type":"exact"},{"name":"malignant soft palate tumor","type":"exact"},{"name":"malignant soft palate tumour","type":"exact"},{"name":"malignant tumor of soft palate","type":"exact"},{"name":"malignant tumor of the soft palate","type":"exact"},{"name":"malignant tumour of soft palate","type":"exact"},{"name":"malignant tumour of the soft palate","type":"exact"},{"name":"soft palate cancer","type":"exact"}],"termid":"MONDO:0004611","xrefs":{"Monarch":{"xref_id":"0004611"}}}


id: GO:0015211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"purine nucleoside transmembrane transporter activity","termid":"GO:0015211"}


id: FYPO:0008258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is decreased. The cell surface refers to the external part of the cell wall and/or plasma membrane.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell surface","termid":"FYPO:0002814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell surface","termid":"FYPO:0008258"}


id: GO:0009507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast","secondary_identifiers":["Wikipedia:Chloroplast"],"termid":"GO:0009507"}


id: GO:0031799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 2 metabotropic glutamate receptor binding","synonyms":[{"name":"type 2 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031799"}


id: FYPO:0004024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to cytoplasmic stress granules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoplasm","termid":"FYPO:0001788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to cytoplasmic stress granule","synonyms":[{"name":"normal protein localisation to cytoplasmic stress granule","type":"exact"},{"name":"normal protein localization to cytoplasmic stress granule during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cytoplasmic stress granule during vegetative growth","type":"exact"},{"name":"normal protein localization to stress granule","type":"exact"}],"termid":"FYPO:0004024"}


id: GO:0072598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a chloroplast.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to chloroplast","synonyms":[{"name":"protein localisation to chloroplast","type":"exact"}],"termid":"GO:0072598"}


id: PR:Q02088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tropomyosin cdc8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8 (Schizosaccharomyces pombe)","termid":"PR:000027986"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.02c","secondary_identifiers":["UniProtKB:Q02088"],"synonyms":[{"name":"Spom972h-cdc8","type":"exact"}],"termid":"PR:Q02088"}


id: GO:0102504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: luteolinidin + UDP-alpha-D-glucose = luteolinidin 5-O-glucoside + UDP + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete luteolinidin 5-O-glucosyltransferase activity (obsolete GO:0102504)","termid":"GO:0102504"}


id: MOD:01148
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a ubiquitin.","definition_xrefs":["PubMed:18688235","PubMed:11125103"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"ubiquitinylated lysine","termid":"MOD:01148"}


id: MOD:01684
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to a palmitoylated-L-cysteine, such as N-palmitoyl-L-cysteine or S-palmitoyl-L-cysteine.","definition_xrefs":["OMSSA:92","Unimod:47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"palmitoylated-L-cysteine","synonyms":[{"name":"Hexadecanoylated L-cysteine","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"PamCys","type":"exact"},{"name":"palmitoylationc","type":"exact"}],"termid":"MOD:01684"}


id: PBO:0058110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4325","termid":"PBO:0058110"}


id: PBO:0030513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_purvalanol_A","termid":"PBO:0030513"}


id: MONDO:0004131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A large, well differentiated squamous cell carcinoma with a cauliflower-like appearance, characterized by the presence of an exophytic and endophytic growth pattern. Morphologically, there is papillomatosis and acanthosis present, however cytologically the neoplastic squamous cells have a benign appearance. Dysplastic changes are minimal. It does not respond to conservative treatment and it is regarded by many authors as an intermediate lesion between condyloma acuminatum and squamous cell carcinoma.","definition_xrefs":["NCIT:C7470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anal squamous cell carcinoma","termid":"MONDO:0006082"},{"relation_name":"is_a","term_name":"Buschke Lowenstein tumor","termid":"MONDO:0027026"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anal verrucous carcinoma","secondary_identifiers":["UMLS:C1332278","DOID:7175","MEDGEN:231066"],"synonyms":[{"name":"anal Buschke-Lowenstein tumor","type":"exact"},{"name":"anal Buschke-Lowenstein tumour","type":"exact"},{"name":"anal giant (malignant) condyloma","type":"exact"},{"name":"anal verrucous carcinoma","type":"exact"}],"termid":"MONDO:0004131","xrefs":{"Monarch":{"xref_id":"0004131"}}}


id: GO:0022853
data:
  {"annotated_genes":["SJAG_03866","SJAG_MIT13","SJAG_00516","SJAG_00212","SJAG_00976","SJAG_03406","SJAG_03337","SJAG_04167","SJAG_04152","SJAG_02782","SJAG_01490","SJAG_00136","SJAG_07007","SJAG_04757","SJAG_01190","SJAG_01447","SJAG_02399","SJAG_01077","SJAG_01397","SJAG_01669","SJAG_03490","SJAG_01435","SJAG_05629","SJAG_02504","SJAG_02646","SJAG_MIT03","SJAG_04955","SJAG_00755","SJAG_04258","SJAG_03850","SJAG_MIT04","SJAG_05294","SJAG_00601","SJAG_02023","SJAG_07006","SJAG_01129","SJAG_01817","SJAG_01400","SJAG_01355","SJAG_01913","SJAG_01471","SJAG_04015","SJAG_MIT20"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[72844,76945,82000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019829"},{"annotations":[93811,121115,116227,75693,117462,90032,118826,121086,91067,121064,110246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[114847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[73195,82046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[79624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[109812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[114338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[79712,72557,74986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[75363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[65839,63354,58435,61264,69231,61980,62670,66544,80322,81448,61804,61018,72975,80269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"},{"annotations":[64963,120186,106002,109920,115393,119699,121090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an ion from one side of a membrane to the other up the solute's concentration gradient. This is carried out by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transporter activity","termid":"GO:0015075"},{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01129":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01490":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02399":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02782":null,"SJAG_03337":null,"SJAG_03406":null,"SJAG_03490":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_04015":null,"SJAG_04152":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04757":null,"SJAG_04955":null,"SJAG_05294":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"active monoatomic ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"active ion transmembrane transporter activity","type":"broad"}],"termid":"GO:0022853","terms_by_termid":{"GO:0004129":null,"GO:0005388":null,"GO:0008121":null,"GO:0008137":null,"GO:0008553":null,"GO:0008554":null,"GO:0008900":null,"GO:0015410":null,"GO:0019829":null,"GO:0043682":null,"GO:0046961":null,"GO:0140581":null}}


id: GO:2000876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glyoxylate cycle.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of glyoxylate cycle","termid":"GO:2000874"},{"relation_name":"positively_regulates","term_name":"glyoxylate cycle","termid":"GO:0006097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glyoxylate cycle","synonyms":[{"name":"positive regulation of glyoxylate bypass","type":"exact"}],"termid":"GO:2000876"}


id: GO:0021728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior reticular formation over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior reticular formation development","termid":"GO:0021728"}


id: PBO:0049713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 1","termid":"PBO:0049713"}


id: MONDO:0021493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the minor salivary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of minor salivary gland","termid":"MONDO:0021370"},{"relation_name":"is_a","term_name":"benign neoplasm of salivary gland","termid":"MONDO:0021460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of minor salivary gland","secondary_identifiers":["SCTID:92220004","ICD9:210.4","MEDGEN:87508","UMLS:C0345615","NCIT:C4411"],"synonyms":[{"name":"benign minor salivary gland neoplasm","type":"exact"},{"name":"benign minor salivary gland tumor","type":"exact"},{"name":"benign minor salivary gland tumour","type":"exact"},{"name":"benign neoplasm of the minor salivary gland","type":"exact"},{"name":"benign tumor of minor salivary gland","type":"exact"},{"name":"benign tumor of the minor salivary gland","type":"exact"},{"name":"benign tumour of minor salivary gland","type":"exact"},{"name":"benign tumour of the minor salivary gland","type":"exact"},{"name":"minor salivary gland benign neoplasm","type":"exact"}],"termid":"MONDO:0021493","xrefs":{"Monarch":{"xref_id":"0021493"}}}


id: GO:0071557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from lysine at position 27 of the histone.","definition_xrefs":["GOC:sp","PMID:20023638"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 demethylation (obsolete GO:0071557)","synonyms":[{"name":"H3K27 demethylation","type":"related"}],"termid":"GO:0071557"}


id: MONDO:0007737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Humero-radial synostosis is a rare, genetic, congenital joint formation defect disorder characterized by uni- or bilateral fusion of the humerus and radius bones at the elbow level, with or without associated ulnar and carpal/metacarpal deficiency, leading to loss of elbow motion and, in many cases, functional arm incapacity. Bowing of radius may be additionally present.","definition_xrefs":["Orphanet:3265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humeroradial synostosis","secondary_identifiers":["MEDGEN:418931","DOID:0060467","GARD:2748","OMIM:143050","UMLS:C2930865","SCTID:205329008","HP:0003041","icd11.foundation:518723993","ICD9:755.59"],"synonyms":[{"name":"humero-radial fusion","type":"exact"},{"name":"humero-radial synostosis","type":"related"},{"name":"humeroradial synostosis","type":"exact"},{"name":"humeroradial synostosis (disease)","type":"exact"}],"termid":"MONDO:0007737","xrefs":{"Monarch":{"xref_id":"0007737"}}}


id: PBO:0003209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Utp15 (predicted)","termid":"PBO:0003209"}


id: PBO:0116745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 related chromatin remodeling ATPase 5","termid":"PBO:0116745"}


id: GO:1905274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of modification of postsynaptic actin cytoskeleton.","definition_xrefs":["PMID:21068295","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of modification of postsynaptic structure","termid":"GO:0099159"},{"relation_name":"regulates","term_name":"modification of postsynaptic actin cytoskeleton","termid":"GO:0098885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of modification of postsynaptic actin cytoskeleton","synonyms":[{"name":"regulation of postsynaptic actin cytoskeleton remodelling","type":"exact"}],"termid":"GO:1905274"}


id: PBO:0041400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 52","termid":"PBO:0041400"}


id: PBO:0068146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 453","termid":"PBO:0068146"}


id: PBO:0047550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 8","termid":"PBO:0047550"}


id: MONDO:0008028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, Barnes type","secondary_identifiers":["MESH:C563558","MEDGEN:322468","OMIM:158800","UMLS:C1834688"],"synonyms":[{"name":"muscular dystrophy, Barnes type","type":"exact"}],"termid":"MONDO:0008028","xrefs":{"Monarch":{"xref_id":"0008028"}}}


id: PBO:0046933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 50 member A","termid":"PBO:0046933"}


id: GO:0039707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components by a virus to form a pore complex in a membrane of a host organism.","definition_xrefs":["GOC:jl","GOC:bf","PMID:12972148"],"gene_count":0,"genotype_count":0,"name":"obsolete virus-mediated pore formation in host cell membrane (obsolete GO:0039707)","synonyms":[{"name":"pore formation by virus in membrane of host cell","type":"exact"},{"name":"pore formation in membrane of host cell by virus","type":"exact"},{"name":"viroporin","type":"related"}],"termid":"GO:0039707"}


id: MONDO:0020167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malposition of external canthus (obsolete MONDO:0020167)","secondary_identifiers":["Orphanet:98576"],"termid":"MONDO:0020167","xrefs":{"Monarch":{"xref_id":"0020167"}}}


id: PBO:0071782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 10","termid":"PBO:0071782"}


id: MONDO:0100447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by biallelic variants in the AFT6 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ATF6-related retinopathy","synonyms":[{"name":"ACHM7","type":"narrow"},{"name":"ATF6 achromatopsia","type":"narrow"},{"name":"ATF6 retinopathy","type":"exact"},{"name":"ATF6-related retinopathy","type":"exact"},{"name":"achromatopsia 7","type":"narrow"},{"name":"achromatopsia caused by mutation in ATF6","type":"narrow"},{"name":"achromatopsia type 7","type":"narrow"}],"termid":"MONDO:0100447","xrefs":{"Monarch":{"xref_id":"0100447"}}}


id: MONDO:0019348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Ehlers-Danlos syndrome (EDS) with periventricular heterotopia is a newly described variant of EDS. Affected patients exhibit features consistent with EDS, including joint hypermobility, skin fragility and aortic dilatation. They also have periventricular heterotopia (PH), which is characterized by focal epilepsy usually beginning in the second decade of life. Intelligence is generally normal. Some patients also have cardiac anomalies such as patent ductus arteriosus, bicuspid aortic valves, or aneurismal dilatation of the sinus of Valsalva.","definition_xrefs":["Orphanet:82004"],"gene_count":0,"genotype_count":0,"name":"obsolete Ehlers-Danlos syndrome with periventricular heterotopia (obsolete MONDO:0019348)","secondary_identifiers":["SCTID:720857006","OMIM:300537"],"synonyms":[{"name":"EDS with periventricular heterotopia","type":"exact"}],"termid":"MONDO:0019348","xrefs":{"Monarch":{"xref_id":"0019348"}}}


id: SOFP:mol_type
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"The type of molecule","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mol_type","termid":"SOFP:mol_type"}


id: PBO:0030955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_outer_repeat","termid":"PBO:0030955"}


id: PBO:0045669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 heavy chain 1","termid":"PBO:0045669"}


id: PBO:0064236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCL2 antisense RNA 1","termid":"PBO:0064236"}


id: PBO:0057788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3115","termid":"PBO:0057788"}


id: GO:0046088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cytidine, cytosine riboside, a widely distributed nucleoside.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cytidine biosynthetic process (obsolete GO:0046088)","synonyms":[{"name":"cytidine anabolism","type":"exact"},{"name":"cytidine biosynthesis","type":"exact"},{"name":"cytidine formation","type":"exact"},{"name":"cytidine synthesis","type":"exact"}],"termid":"GO:0046088"}


id: MONDO:0850127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory myofibroblastic tumor","termid":"MONDO:0015798"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid inflammatory myofibroblastic sarcoma","secondary_identifiers":["MEDGEN:1843877","DOID:0080372","UMLS:C5880506"],"termid":"MONDO:0850127","xrefs":{"Monarch":{"xref_id":"0850127"}}}


id: FYPO:0006455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle during meiosis I","synonyms":[{"name":"abolished protein localisation to meiotic spindle during meiosis I","type":"exact"},{"name":"abolished protein localization to meiosis I spindle","type":"exact"},{"name":"abolished protein localization to meiotic spindle during first meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to spindle during meiosis I","type":"exact"},{"name":"protein localization to meiotic spindle abolished during meiosis I","type":"exact"}],"termid":"FYPO:0006455"}


id: PR:O74360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga4 gene.","definition_xrefs":["UniProtKB:O74360","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.03","synonyms":[{"name":"Spom972h-rga4","type":"exact"}],"termid":"PR:O74360"}


id: GO:0045653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of megakaryocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"regulation of megakaryocyte differentiation","termid":"GO:0045652"},{"relation_name":"negatively_regulates","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of megakaryocyte differentiation","synonyms":[{"name":"down regulation of megakaryocyte differentiation","type":"exact"},{"name":"down-regulation of megakaryocyte differentiation","type":"exact"},{"name":"downregulation of megakaryocyte differentiation","type":"exact"},{"name":"inhibition of megakaryocyte differentiation","type":"narrow"}],"termid":"GO:0045653"}


id: GO:1903786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutathione biosynthetic process.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"glutathione biosynthetic process","termid":"GO:0006750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of glutathione biosynthetic process","synonyms":[{"name":"regulation of glutathione anabolism","type":"exact"},{"name":"regulation of glutathione biosynthesis","type":"exact"},{"name":"regulation of glutathione formation","type":"exact"},{"name":"regulation of glutathione synthesis","type":"exact"}],"termid":"GO:1903786"}


id: PBO:0029332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation","termid":"PBO:0029332"}


id: PBO:0070226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 160 pseudogene","termid":"PBO:0070226"}


id: FYPO:0005494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the transport of proteins along microtubules is decreased. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein transport during vegetative growth","termid":"FYPO:0000541"},{"relation_name":"is_a","term_name":"decreased transport along microtubule during vegetative growth","termid":"FYPO:0005526"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule during vegetative growth","termid":"FYPO:0005830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein transport along microtubule during vegetative growth","synonyms":[{"name":"decreased protein movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased protein transport along microtubule during mitotic cell cycle","type":"related"},{"name":"reduced protein transport along microtubule during vegetative growth","type":"exact"}],"termid":"FYPO:0005494"}


id: PBO:0089978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone, FACT complex subunit Pob3","termid":"PBO:0089978"}


id: PBO:0064035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 69","termid":"PBO:0064035"}


id: GO:0016836
data:
  {"annotated_genes":["SJAG_04404","SJAG_01630","SJAG_00461","SJAG_02689","SJAG_02369","SJAG_06611","SJAG_04098","SJAG_02293","SJAG_00337","SJAG_02107","SJAG_02084","SJAG_05007","SJAG_03588","SJAG_00592","SJAG_04843","SJAG_02106","SJAG_01574","SJAG_05283","SJAG_02988","SJAG_03669","SJAG_04674","SJAG_01372","SJAG_03124","SJAG_03213","SJAG_01300","SJAG_03243","SJAG_04107","SJAG_00305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60284,76403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019171"},{"annotations":[60349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003855"},{"annotations":[59633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003861"},{"annotations":[75441,74926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003994"},{"annotations":[79305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047453"},{"annotations":[79350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004089"},{"annotations":[72964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004160"},{"annotations":[81097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004333"},{"annotations":[74613,76247,59612,61424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019172"},{"annotations":[65298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004409"},{"annotations":[77474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004424"},{"annotations":[80156,82115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046570"},{"annotations":[72161,71603,78790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004634"},{"annotations":[73406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004655"},{"annotations":[79732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004664"},{"annotations":[81517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004730"},{"annotations":[82083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061503"},{"annotations":[75228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004834"},{"annotations":[76707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004852"},{"annotations":[62148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a carbon-oxygen bond by elimination of water.","definition_xrefs":["EC:4.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00305":null,"SJAG_00337":null,"SJAG_00461":null,"SJAG_00592":null,"SJAG_01300":null,"SJAG_01372":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_02084":null,"SJAG_02106":null,"SJAG_02107":null,"SJAG_02293":null,"SJAG_02369":null,"SJAG_02689":null,"SJAG_02988":null,"SJAG_03124":null,"SJAG_03213":null,"SJAG_03243":null,"SJAG_03588":null,"SJAG_03669":null,"SJAG_04098":null,"SJAG_04107":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04843":null,"SJAG_05007":null,"SJAG_05283":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"hydro-lyase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2161659"],"termid":"GO:0016836","terms_by_termid":{"GO:0003855":null,"GO:0003861":null,"GO:0003994":null,"GO:0004089":null,"GO:0004160":null,"GO:0004333":null,"GO:0004409":null,"GO:0004424":null,"GO:0004634":null,"GO:0004655":null,"GO:0004664":null,"GO:0004730":null,"GO:0004834":null,"GO:0004852":null,"GO:0019171":null,"GO:0019172":null,"GO:0046570":null,"GO:0047453":null,"GO:0061503":null,"GO:0102158":null}}


id: MONDO:0005478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant form of polymorphic ventricular tachycardia that is characterized by heart rate between 200 and 250 beats per minute, and qrs complexes with changing amplitude and twisting of the points. The term also describes the syndrome of tachycardia with prolonged ventricular repolarization, long qt intervals exceeding 500 milliseconds or bradycardia. Torsades de pointes may be self-limited or may progress to ventricular fibrillation.","definition_xrefs":["MESH:D016171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular tachycardia","termid":"MONDO:0005477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"torsades de pointes","secondary_identifiers":["SCTID:31722008","HP:0001664","EFO:0005307","UMLS:C0040479","MEDGEN:21214"],"termid":"MONDO:0005478","xrefs":{"Monarch":{"xref_id":"0005478"}}}


id: GO:0008496
data:
  {"annotated_genes":["SJAG_00310","SJAG_04851","SJAG_02711","SJAG_04850","SJAG_05272"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57549,57935,58166,64063,98825],"is_not":false,"summary":null,"term":"GO:0008496"}]},"cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->6)-alpha-D-mannosidic linkages in unbranched (1->6)-mannans.","definition_xrefs":["EC:3.2.1.101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00310":null,"SJAG_02711":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6799581","MetaCyc:3.2.1.101-RXN"],"synonyms":[{"name":"1,6-alpha-D-mannan mannanohydrolase activity","type":"related"},{"name":"1,6-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"endo-1,6-beta-mannanase activity","type":"related"},{"name":"endo-alpha-1->6-D-mannanase activity","type":"related"},{"name":"endo-alpha-D-mannosidase activity","type":"exact"},{"name":"exo-1,6-beta-mannanase activity","type":"related"},{"name":"mannan endo-1,6-beta-mannosidase activity","type":"related"}],"termid":"GO:0008496","terms_by_termid":{"GO:0008496":null}}


id: GO:2000690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myoblast differentiation","termid":"GO:0045661"},{"relation_name":"is_a","term_name":"regulation of cardioblast differentiation","termid":"GO:0051890"},{"relation_name":"regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"regulation of cardiac myoblast differentiation","type":"related"},{"name":"regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000690"}


id: SO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A joining gene that rearranges at the DNA level and codes the joining region of the variable domain of an immunoglobulin chain.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_J_gene","synonyms":[{"name":"IG_joining_gene","type":"exact"},{"name":"Immunoglobulin_Joining_Gene","type":"exact"},{"name":"immunoglobulin_J_gene","type":"exact"}],"termid":"SO:0002125"}


id: GO:0015121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phosphoenolpyruvate(out) + phosphate(in) = phosphoenolpyruvate(in) + phosphate(out).","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"},{"relation_name":"is_a","term_name":"phosphoenolpyruvate transmembrane transporter activity","termid":"GO:0089721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate:phosphate antiporter activity","synonyms":[{"name":"PPT","type":"broad"},{"name":"phosphoenolpyruvate/phosphate translocator","type":"exact"}],"termid":"GO:0015121"}


id: PBO:0046045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit C like","termid":"PBO:0046045"}


id: GO:0030110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I molecule of the HLA-C subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["GOC:add","PMID:11929129","PMID:9368779","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"HLA-C specific inhibitory MHC class I receptor activity","termid":"GO:0030110"}


id: GO:0006649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of a phospholipid from its site of synthesis to the plasma membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"part_of","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"phospholipid transfer to membrane","termid":"GO:0006649"}


id: GO:0052158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont modulates the frequency, rate or extent of the resistance gene-dependent defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defenses","termid":"GO:0030682"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host resistance gene-dependent defense response","secondary_identifiers":["GO:0052297"],"synonyms":[{"name":"modulation by organism of defense response in host by specific elicitors","type":"exact"},{"name":"modulation by organism of host gene-for-gene resistance","type":"exact"},{"name":"modulation by organism of pathogen-race/host plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"modulation by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0052158"}


id: GO:1900882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 17-methylnonadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900882"}


id: PBO:0086336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protoporphyrinogen oxidase; a mitochondrial enzyme that catalyzes the seventh step in the heme biosynthetic pathway, converting protoporphyrinogen IX to protoporphyrin IX; inhibited by diphenyl ether-type herbicides","termid":"PBO:0086336"}


id: PBO:0076944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferrin receptor 2","termid":"PBO:0076944"}


id: PBO:0074951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-2","termid":"PBO:0074951"}


id: MONDO:0019802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary short bowel syndrome is an intestinal failure caused by any condition that results in a functional small intestine of less than 200 cm in length and is characterized by diarrhea, nutrient malabsoption, bowel dilation and dysmobility.","definition_xrefs":["Orphanet:95427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short bowel syndrome","termid":"MONDO:0015183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"secondary short bowel syndrome","secondary_identifiers":["GARD:19258","MEDGEN:1842747","UMLS:C5681579"],"termid":"MONDO:0019802","xrefs":{"Monarch":{"xref_id":"0019802"}}}


id: MOD:00847
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two (18)O atom for two (16)O atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O substituted residue","termid":"MOD:00845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O disubstituted residue","termid":"MOD:00847"}


id: internal:name
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name","termid":"internal:name"}


id: GO:0060664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells of the submandibular salivary gland, resulting in the expansion of a cell population and the shaping of the gland.","definition_xrefs":["GOC:dph","PMID:17336109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in salivary gland morphogenesis","termid":"GO:0060664"}


id: PBO:0070170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 84 pseudogene","termid":"PBO:0070170"}


id: PR:C6Y4C1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet117 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pet117, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.25","synonyms":[{"name":"Spom972h-pet117","type":"exact"}],"termid":"PR:C6Y4C1"}


id: PBO:0035833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_dimethylation_during_vegetative_growth","termid":"PBO:0035833"}


id: GO:0072695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombination within the telomere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA recombination at telomere","synonyms":[{"name":"regulation of telomeric recombination","type":"exact"}],"termid":"GO:0072695"}


id: PBO:0055916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A4, pseudogene","termid":"PBO:0055916"}


id: GO:0018111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine = D-methionine.","definition_xrefs":["RHEA:12492","EC:5.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"methionine racemase activity","secondary_identifiers":["MetaCyc:METHIONINE-RACEMASE-RXN","KEGG_REACTION:R00655"],"termid":"GO:0018111"}


id: GO:0047680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anilide + H2O = a carboxylate + aniline + H+.","definition_xrefs":["EC:3.5.1.13","RHEA:20297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"aryl-acylamidase activity","secondary_identifiers":["KEGG_REACTION:R01862","MetaCyc:ARYL-ACYLAMIDASE-RXN"],"synonyms":[{"name":"AAA-1","type":"related"},{"name":"AAA-2","type":"related"},{"name":"aryl-acylamide amidohydrolase activity","type":"related"},{"name":"brain acetylcholinesterase (is associated with AAA-2)","type":"related"},{"name":"pseudocholinesterase (associated with arylacylamidase)","type":"related"}],"termid":"GO:0047680"}


id: MONDO:0016219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysmorphism-pectus carinatum-joint laxity syndrome is characterized by joint laxity, pectus carinatum and facial dysmorphism (mild frontal bossing, a beaked nose with a low nasal bridge, malar hypoplasia, chubby cheeks, a striking philtrum and arched upper lips). It has been described in two siblings. The mode of transmission is unknown.","definition_xrefs":["Orphanet:2104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysmorphism-pectus carinatum-joint laxity syndrome","secondary_identifiers":["GARD:18760","MEDGEN:1385827","UMLS:C4518558"],"synonyms":[{"name":"Guizar Vasquez Sanchez Manzano syndrome","type":"related"},{"name":"Guízar Vázquez-Sánchez-Manzano syndrome","type":"exact"},{"name":"dysmorphism-pectus carinatum-joint laxity syndrome","type":"exact"}],"termid":"MONDO:0016219","xrefs":{"Monarch":{"xref_id":"0016219"}}}


id: PBO:0027289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutathione_transferase_activity_during_stationary_phase","termid":"PBO:0027289"}


id: PBO:0083490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YBR301W; YBR300C is not an essential gene","termid":"PBO:0083490"}


id: PBO:0079969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 7","termid":"PBO:0079969"}


id: GO:0015276
data:
  {"annotated_genes":["SJAG_03895","SJAG_02322"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74811,81647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ligand-gated monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-451311","Reactome:R-HSA-622326","Reactome:R-HSA-629595","Reactome:R-HSA-451310","Reactome:R-HSA-622325"],"synonyms":[{"name":"ionotropic receptor activity","type":"narrow"},{"name":"ligand-gated ion channel activity","type":"broad"}],"termid":"GO:0015276","terms_by_termid":{"GO:0005227":null}}


id: GO:0102266
data:
  {"annotated_genes":["SJAG_01041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61141],"is_not":false,"summary":null,"term":"GO:0102266"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil20a in tRNA + NAD(P) = H+ + a uracil20a in tRNA + NAD(P)H.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0140101","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"tRNA-dihydrouridine20a synthase activity","references_by_uniquename":{"GO_REF:0000117":null},"secondary_identifiers":["EC:1.3.1.90"],"termid":"GO:0102266","terms_by_termid":{"GO:0102266":null}}


id: PBO:0073880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 7","termid":"PBO:0073880"}


id: GO:0061287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric capsule from unspecified parts. The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule formation","termid":"GO:0072129"},{"relation_name":"part_of","term_name":"mesonephric capsule morphogenesis","termid":"GO:0061286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule formation","termid":"GO:0061287"}


id: PR:O42700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transaldolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04445","PRO:DNx","PANTHER:PTHR10683:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.06c","secondary_identifiers":["UniProtKB:O42700"],"synonyms":[{"name":"Spom972h-TALDO1","type":"exact"}],"termid":"PR:O42700"}


id: MONDO:0003662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endometrioid ovary carcinoma (obsolete MONDO:0003662)","termid":"MONDO:0003662","xrefs":{"Monarch":{"xref_id":"0003662"}}}


id: PBO:0075857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 5","termid":"PBO:0075857"}


id: GO:0005778
data:
  {"annotated_genes":["SJAG_02997","SJAG_02693","SJAG_00891","SJAG_03464","SJAG_04428","SJAG_00947","SJAG_03715","SJAG_01685","SJAG_04146","SJAG_03493","SJAG_01165","SJAG_03440","SJAG_02619","SJAG_04315","SJAG_04763","SJAG_03324","SJAG_05950","SJAG_00702","SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59290,72439,73513,75092,75485,77305,77663,79554,79926,80301,81475,82170,92272,98848,100465,108637,117300,117764,120194],"is_not":false,"summary":null,"term":"GO:0005778"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a peroxisome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody membrane","termid":"GO:0031903"},{"relation_name":"part_of","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00702":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_01165":null,"SJAG_01685":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04315":null,"SJAG_04428":null,"SJAG_04763":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005777","GO:0005737"],"is_obsolete":false,"name":"peroxisomal membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"peroxisome membrane","type":"exact"}],"termid":"GO:0005778","terms_by_termid":{"GO:0005778":null}}


id: MONDO:0012545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neutral lipid storage disease","termid":"MONDO:0015611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"neutral lipid storage myopathy","secondary_identifiers":["icd11.foundation:1512138529","OMIM:610717","MEDGEN:339913","Orphanet:98908","SCTID:699315005","UMLS:C1853136","GARD:10288"],"synonyms":[{"name":"NLSDM","type":"exact"},{"name":"neutral lipid storage disease with myopathy","type":"related"},{"name":"neutral lipid storage disease with myopathy without ichthyosis","type":"exact"},{"name":"neutral lipid storage disease without ichthyosis","type":"related"},{"name":"triglyceride deposit cardiomyovasculopathy","type":"related"}],"termid":"MONDO:0012545","xrefs":{"Monarch":{"xref_id":"0012545"}}}


id: PBO:0027115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_shmoo_tip","termid":"PBO:0027115"}


id: FYECO:0000037
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bismuth ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Bi ions","synonyms":[{"name":"bismuth ions added","type":"exact"}],"termid":"FYECO:0000037"}


id: GO:0000823
data:
  {"annotated_genes":["SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100698],"is_not":false,"summary":null,"term":"GO:0000823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + ATP = 1D-myo-inositol 1,4,5,6-tetrakisphosphate + ADP + H+.","definition_xrefs":["RHEA:17717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 6-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.7.1.151-RXN","KEGG_REACTION:R05800"],"synonyms":[{"name":"IpmK","type":"broad"},{"name":"inositol polyphosphate multikinase activity","type":"broad"},{"name":"inositol trisphosphate 6-kinase activity","type":"broad"}],"termid":"GO:0000823","terms_by_termid":{"GO:0000823":null}}


id: PBO:0047844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FPGT-TNNI3K readthrough","termid":"PBO:0047844"}


id: PBO:0027135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere-nuclear_envelope_distance","termid":"PBO:0027135"}


id: MONDO:0015221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A respiratory or mediastinal malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","secondary_identifiers":["Orphanet:108993"],"synonyms":[{"name":"isolated respiratory or mediastinal malformation","type":"exact"},{"name":"nonsyndromic respiratory or mediastinal malformation","type":"exact"}],"termid":"MONDO:0015221","xrefs":{"Monarch":{"xref_id":"0015221"}}}


id: PBO:0042695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 2A","termid":"PBO:0042695"}


id: GO:0006786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heme c, a derivative of heme found in cytochromes c, b4, and f.","definition_xrefs":["PubChem_Compound:122208","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme biosynthetic process","termid":"GO:0006783"},{"relation_name":"is_a","term_name":"heme C metabolic process","termid":"GO:0046162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme C biosynthetic process","synonyms":[{"name":"haem C biosynthesis","type":"exact"},{"name":"haem C biosynthetic process","type":"exact"},{"name":"heme C anabolism","type":"exact"},{"name":"heme C biosynthesis","type":"exact"},{"name":"heme C formation","type":"exact"},{"name":"heme C synthesis","type":"exact"}],"termid":"GO:0006786"}


id: GO:1990735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a gamma-tubulin complex is transported to, or maintained in, a specific location at a mitotic spindle pole body.","definition_xrefs":["GOC:dos","GOC:mah","PMID:11080156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex localization","termid":"GO:0033566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gamma-tubulin complex localization to mitotic spindle pole body","synonyms":[{"name":"establishment and maintenance of gamma-tubulin complex localization to mitotic spindle pole body","type":"exact"},{"name":"gamma-tubulin complex localisation to mitotic spindle pole body","type":"exact"},{"name":"gamma-tubulin complex localization to mitotic SPB","type":"exact"}],"termid":"GO:1990735"}


id: PBO:0041041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA2 DNA repair associated","termid":"PBO:0041041"}


id: FYPO:0004505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleolar chromatin organization is abnormal.","definition_xrefs":["PomBase:mah","PMID:18362178","GO:1990700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleolus organization","termid":"FYPO:0000814"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nucleolar chromatin organization","synonyms":[{"name":"abnormal chromatin organization at nucleolus","type":"related"},{"name":"abnormal nucleolar chromatin organisation","type":"exact"},{"name":"abnormal nucleolar chromatin organization during mitotic cell cycle","type":"related"},{"name":"abnormal nucleolar chromatin organization during vegetative growth","type":"exact"}],"termid":"FYPO:0004505"}


id: MONDO:1012698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any necrotising myelopathy that occurs in calves of the Simmental breed of cattle and is characterized by progressive hindlimb ataxia and paralysis and bilateral symmetrical foci of necrosis throughout the grey matter of the brain.","definition_xrefs":["PMID:18503072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necrotising myelopathy, non-human animal","termid":"MONDO:1011850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal symmetrical necrotizing encephalomyelopathy, Simmental cattle","secondary_identifiers":["OMIA:001490-9913"],"termid":"MONDO:1012698","xrefs":{"Monarch":{"xref_id":"1012698"}}}


id: MONDO:0011459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arrhythmogenic right ventricular cardiomyopathy in which the cause of the disease is a mutation in the TMEM43 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 5","secondary_identifiers":["MEDGEN:346805","UMLS:C1858379","MESH:C565776","DOID:0110074","OMIM:604400"],"synonyms":[{"name":"ARVC5","type":"exact"},{"name":"ARVD5","type":"exact"},{"name":"TMEM43 arrhythmogenic right ventricular cardiomyopathy","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 5","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy caused by mutation in TMEM43","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia 5","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 5","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 5","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, type 5","type":"exact"},{"name":"familial arrhythmogenic right ventricular dysplasia 5","type":"exact"}],"termid":"MONDO:0011459","xrefs":{"Monarch":{"xref_id":"0011459"}}}


id: PBO:0036288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Vps66 (predicted)","termid":"PBO:0036288"}


id: MONDO:0957534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy, megalencephalic","termid":"MONDO:0000137"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts 4, remitting","secondary_identifiers":["UMLS:C5830628","OMIM:620448","MEDGEN:1841264"],"termid":"MONDO:0957534","xrefs":{"Monarch":{"xref_id":"0957534"}}}


id: MONDO:0035863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome-intellectual disability (obsolete MONDO:0035863)","secondary_identifiers":["Orphanet:611327"],"termid":"MONDO:0035863","xrefs":{"Monarch":{"xref_id":"0035863"}}}


id: PBO:0074123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC30A6 pseudogene 1","termid":"PBO:0074123"}


id: PBO:0064980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 36, pseudogene","termid":"PBO:0064980"}


id: PBO:0089408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation dependent mannose-6-phosphate cargo receptor Mrl1","termid":"PBO:0089408"}


id: FYPO:0001772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a tRNA methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased tRNA methyltransferase activity","synonyms":[{"name":"reduced tRNA methyltransferase activity","type":"exact"}],"termid":"FYPO:0001772"}


id: MONDO:0019844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acquired pituitary hormone deficiency","termid":"MONDO:0019832"}],"gene_count":0,"genotype_count":0,"name":"obsolete pituitary hormone deficiency secondary to storage disease (obsolete MONDO:0019844)","secondary_identifiers":["Orphanet:95618"],"termid":"MONDO:0019844","xrefs":{"Monarch":{"xref_id":"0019844"}}}


id: GO:0046658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group, that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of plasma membrane (obsolete GO:0046658)","synonyms":[{"name":"anchored to plasma membrane","type":"narrow"},{"name":"plasma membrane, GPI-anchored","type":"narrow"}],"termid":"GO:0046658"}


id: SO:0000811
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone invalidated by genomic contamination.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_genomic_contamination","termid":"SO:0000414"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_contaminated_cDNA_clone","synonyms":[{"name":"genomically contaminated cDNA clone","type":"exact"}],"termid":"SO:0000811"}


id: GO:1905275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a Rohon-Beard neuron.","definition_xrefs":["GO_REF:0000086","GOC:TermGenie","ZFIN:ZDB-PUB-120807-45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Rohon-Beard neuron differentiation","termid":"GO:1905275"}


id: PBO:0005037
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.2","termid":"PBO:0005037"}


id: MONDO:0013875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3-methylglutaconic aciduria in which the cause of the disease is a mutation in the SERAC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"SERAC1-related neurological disorder","termid":"MONDO:0100548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0004069","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome","secondary_identifiers":["MEDGEN:873604","DOID:0110001","OMIM:614739","Orphanet:352328","SCTID:711409002","UMLS:C4040739","GARD:12963"],"synonyms":[{"name":"3-MGCA type IV (formerly)","type":"related"},{"name":"3-MGCA-4 (formerly)","type":"related"},{"name":"3-Methylglutaconic aciduria with dystonia-deafness, hepatopathy, encephalopathy, and Leigh-like syndrome","type":"related"},{"name":"3-Methylglutaconic aciduria, type 6","type":"related"},{"name":"3-methylglutaconic aciduria caused by mutation in SERAC1","type":"exact"},{"name":"3-methylglutaconic aciduria type 6","type":"exact"},{"name":"3-methylglutaconic aciduria type VI","type":"related"},{"name":"3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome","type":"exact"},{"name":"3-methylglutaconic aciduria with deafness-encephalopathy-Leigh-like syndrome","type":"exact"},{"name":"MEGDEL","type":"exact"},{"name":"MEGDEL syndrome","type":"exact"},{"name":"MGCA6","type":"exact"},{"name":"SERAC1 3-methylglutaconic aciduria","type":"exact"},{"name":"SERAC1 defect","type":"related"}],"termid":"MONDO:0013875","xrefs":{"Monarch":{"xref_id":"0013875"}}}


id: PBO:0016072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial S-adenosylmethionine transporter (predicted)","termid":"PBO:0016072"}


id: PBO:0074413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM14 divergent transcript","termid":"PBO:0074413"}


id: MONDO:0003640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign wart-like skin lesion of unknown etiology that is usually found in the genital or perianal area and consists of hyperkeratosis and aggregates of foam cell macrophages.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"xanthomatosis","termid":"MONDO:0002615"},{"relation_name":"is_a","term_name":"xanthoma","termid":"MONDO:0005236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"verruciform xanthoma of skin","secondary_identifiers":["MEDGEN:91076","NCIT:C4478","SCTID:254756007","UMLS:C0346054","DOID:5769","ICD9:215.9"],"synonyms":[{"name":"cutaneous verruciform xanthoma","type":"exact"},{"name":"skin verruciform xanthoma","type":"exact"},{"name":"verruciform xanthoma","type":"exact"},{"name":"verruciform xanthoma (morphologic abnormality)","type":"exact"},{"name":"verruciform xanthoma of the skin","type":"exact"}],"termid":"MONDO:0003640","xrefs":{"Monarch":{"xref_id":"0003640"}}}


id: GO:1990370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to aldehyde.","definition_xrefs":["PMID:23356676","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to aldehyde (obsolete GO:1990370)","termid":"GO:1990370"}


id: GO:0019311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving sorbose, the ketohexose xylo-2-hexulose. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete sorbose metabolic process (obsolete GO:0019311)","synonyms":[{"name":"sorbose metabolism","type":"exact"}],"termid":"GO:0019311"}


id: PBO:0071444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 50","termid":"PBO:0071444"}


id: PBO:0005486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf12","termid":"PBO:0005486"}


id: GO:0042579
data:
  {"annotated_genes":["SJAG_02693","SJAG_04146","SJAG_03781","SJAG_00891","SJAG_02384","SJAG_02848","SJAG_03324","SJAG_04428","SJAG_02619","SJAG_04823","SJAG_03464","SJAG_01474","SJAG_05950","SJAG_04763","SJAG_02630","SJAG_04315","SJAG_01685","SJAG_03671","SJAG_00326","SJAG_03715","SJAG_00702","SJAG_04299","SJAG_03440","SJAG_03091","SJAG_04467","SJAG_00114","SJAG_00947","SJAG_03166","SJAG_00706","SJAG_01165","SJAG_02247","SJAG_02997","SJAG_02496","SJAG_03493"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113829,116745,72413,61540,117763,120319,107244],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005782"},{"annotations":[75092,80301,108637,92272,120194,77663,100465,73513,98848,81475,117764,75485,79554,77305,79926,82170,59290,72439,117300],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0005778"},{"annotations":[111586,75394,74165,76080,73327,115929,101745,81611,78071,72006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005777"}]},"cv_name":"cellular_component","definition":"Cytoplasmic organelles, spherical or oval in shape, that are bounded by a single membrane and contain oxidative enzymes, especially those utilizing hydrogen peroxide (H2O2).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_01165":null,"SJAG_01474":null,"SJAG_01685":null,"SJAG_02247":null,"SJAG_02384":null,"SJAG_02496":null,"SJAG_02619":null,"SJAG_02630":null,"SJAG_02693":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03091":null,"SJAG_03166":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03671":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04299":null,"SJAG_04315":null,"SJAG_04428":null,"SJAG_04467":null,"SJAG_04763":null,"SJAG_04823":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"microbody","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Microbody"],"termid":"GO:0042579","terms_by_termid":{"GO:0005777":null,"GO:0005778":null,"GO:0005782":null}}


id: MONDO:0975754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"borderline vascular tumor","termid":"MONDO:0971116"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudomyogenic hemangioendothelioma","secondary_identifiers":["Orphanet:673556","UMLS:C3840252","MEDGEN:826097"],"termid":"MONDO:0975754","xrefs":{"Monarch":{"xref_id":"0975754"}}}


id: MONDO:1010119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleroderma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scleroderma, non-human animal","secondary_identifiers":["OMIA:001202"],"termid":"MONDO:1010119","xrefs":{"Monarch":{"xref_id":"1010119"}}}


id: GO:0004071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-aspartate + NH3 = AMP + diphosphate + L-asparagine.","definition_xrefs":["EC:6.3.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia ligase activity","termid":"GO:0016211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"aspartate-ammonia ligase activity","secondary_identifiers":["RHEA:11372","MetaCyc:ASNSYNA-RXN"],"synonyms":[{"name":"L-asparagine synthetase activity","type":"related"},{"name":"L-aspartate:ammonia ligase (AMP-forming)","type":"related"},{"name":"asparagine synthetase activity","type":"related"}],"termid":"GO:0004071"}


id: PBO:0044706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 6","termid":"PBO:0044706"}


id: PBO:0004027
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by P. carnii Trb1","termid":"PBO:0004027"}


id: PBO:0031657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pseudohyphal_growth","termid":"PBO:0031657"}


id: GO:0120506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl79-[histone H3] + 2 S-adenosyl-L-methionine = 2H+ + N6,N6-methyl-L-lysyl79-[histone H3] + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:15371351","PMID:14732680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K79 methyltransferase activity","termid":"GO:0031151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0008276","GO:0016741","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone H3K79 dimethyltransferase activity","termid":"GO:0120506"}


id: FYPO:0005367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus, has no septum, and progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0000631","FYPO:0000032","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"inviable mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"inviable mononucleate aseptate cell with mitotic cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell arrested at G2/M","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable mononucleate aseptate vegetative cell with mitotic G2/M phase transition arrest","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic G2-phase arrested inviable mononucleate aseptate vegetative cell","type":"related"},{"name":"mitotic cell cycle arrest in G2-phase with inviable mononucleate aseptate cell","type":"related"}],"termid":"FYPO:0005367"}


id: PBO:0074781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3 pseudogene 4","termid":"PBO:0074781"}


id: PBO:0038933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 1A (class I), alpha polypeptide","termid":"PBO:0038933"}


id: PR:Q9UU96
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polynucleotide 5'-hydroxyl-kinase grc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.03","synonyms":[{"name":"Spom972h-grc3","type":"exact"}],"termid":"PR:Q9UU96"}


id: FYPO:0005270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to osmotic stress","termid":"FYPO:0005270"}


id: PBO:0070691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8","termid":"PBO:0070691"}


id: GO:0044691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The tooth development process in which the teeth enter the mouth and become visible.","definition_xrefs":["Wikipedia:Tooth_eruption"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth eruption","termid":"GO:0044691"}


id: GO:0110038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nematode male tail tip morphogenesis.","definition_xrefs":["PMID:28068334","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of nematode male tail tip morphogenesis","termid":"GO:0110037"},{"relation_name":"negatively_regulates","term_name":"nematode male tail tip morphogenesis","termid":"GO:0045138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode male tail tip morphogenesis","termid":"GO:0110038"}


id: PBO:0091831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2427 family conserved fungal protein","termid":"PBO:0091831"}


id: GO:0015171
data:
  {"annotated_genes":["SJAG_00019","SJAG_03827","SJAG_01994","SJAG_02946","SJAG_02941","SJAG_02029","SJAG_06598","SJAG_00522","SJAG_04984","SJAG_01998","SJAG_04957","SJAG_00699","SJAG_03400","SJAG_04637","SJAG_02113","SJAG_03829","SJAG_02947","SJAG_00051","SJAG_04725","SJAG_02150","SJAG_03899","SJAG_00015","SJAG_02133","SJAG_04787","SJAG_02955","SJAG_01770","SJAG_00877","SJAG_04903","SJAG_01096","SJAG_02144","SJAG_03256","SJAG_04718","SJAG_04296","SJAG_04295","SJAG_05342","SJAG_04588","SJAG_00626","SJAG_00149","SJAG_00543","SJAG_04135","SJAG_02062"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74964,77257,77290,78090,78599,78746,79407,79565,80493,81727,81987,82223,91550,101930,105448,120280,120281,120282,120283,120284,120285,120286,120287,120483],"is_not":false,"summary":null,"term":"GO:0015171"},{"annotations":[113858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140485"},{"annotations":[98457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000515"},{"annotations":[97581,65164,96468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015174"},{"annotations":[77223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[71828,79657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[97908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[99248,80944,102268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[112000,104724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[80939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[80937,99249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[104725,112001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[99250,102269,112002,104726,80941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[109863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[102261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[80942,92464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[80938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00015":null,"SJAG_00019":null,"SJAG_00051":null,"SJAG_00149":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00699":null,"SJAG_00877":null,"SJAG_01096":null,"SJAG_01770":null,"SJAG_01994":null,"SJAG_01998":null,"SJAG_02029":null,"SJAG_02062":null,"SJAG_02113":null,"SJAG_02133":null,"SJAG_02144":null,"SJAG_02150":null,"SJAG_02941":null,"SJAG_02946":null,"SJAG_02947":null,"SJAG_02955":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03827":null,"SJAG_03829":null,"SJAG_03899":null,"SJAG_04135":null,"SJAG_04295":null,"SJAG_04296":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04787":null,"SJAG_04903":null,"SJAG_04957":null,"SJAG_04984":null,"SJAG_05342":null,"SJAG_06598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-212642","Reactome:R-HSA-352119","Reactome:R-HSA-352158","Reactome:R-HSA-352182","Reactome:R-HSA-352379","Reactome:R-HSA-375776","Reactome:R-HSA-375790","Reactome:R-HSA-379415","Reactome:R-HSA-352103","Reactome:R-HSA-351987","Reactome:R-HSA-375768","Reactome:R-HSA-375473","Reactome:R-HSA-5659734","Reactome:R-HSA-5659755","Reactome:R-HSA-352059","Reactome:R-HSA-351963","Reactome:R-HSA-352385","Reactome:R-HSA-5659674","Reactome:R-HSA-352107","Reactome:R-HSA-888592","Reactome:R-HSA-375487","Reactome:R-HSA-352191","Reactome:R-HSA-352364","Reactome:R-HSA-375405","Reactome:R-HSA-375417","Reactome:R-HSA-376200","Reactome:R-HSA-379426","Reactome:R-HSA-352174","Reactome:R-HSA-5655702","Reactome:R-HSA-352347","Reactome:R-HSA-5660910","Reactome:R-HSA-5653850","Reactome:R-HSA-352136","Reactome:R-HSA-352371","Reactome:R-HSA-378513","GO:0015359","Reactome:R-HSA-5660694","Reactome:R-HSA-352052","Reactome:R-HSA-352029","Reactome:R-HSA-352108","Reactome:R-HSA-375770","Reactome:R-HSA-5660890","Reactome:R-HSA-210439","Reactome:R-HSA-352354","Reactome:R-HSA-379432","Reactome:R-HSA-8952726"],"synonyms":[{"name":"amino acid permease activity","type":"exact"},{"name":"amino acid transporter activity","type":"broad"},{"name":"amino acid/choline transmembrane transporter activity","type":"narrow"},{"name":"general amino acid permease activity","type":"related"},{"name":"hydroxy/aromatic amino acid permease activity","type":"related"}],"termid":"GO:0015171","terms_by_termid":{"GO:0000064":null,"GO:0000515":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0015171":null,"GO:0015174":null,"GO:0015182":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0033229":null,"GO:0034639":null,"GO:0061459":null,"GO:0140485":null}}


id: GO:0098718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of serine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"serine import across plasma membrane","secondary_identifiers":["GO:0061491"],"synonyms":[{"name":"serine import into cell","type":"exact"}],"termid":"GO:0098718"}


id: PR:Q9P7U2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7U2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl-alcohol dehydrogenase C977.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.14c","synonyms":[{"name":"Spom972h-SPAC977.14c","type":"exact"}],"termid":"PR:Q9P7U2"}


id: PBO:0058749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6873","termid":"PBO:0058749"}


id: FYPO:0004846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of DNA replication pause sites in telomeric regions at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:26041456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Rad52 foci at telomeres","synonyms":[{"name":"increased number of Rad22 foci at telomeres","type":"exact"},{"name":"increased number of Rad52 foci at telomeres during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci at telomeres during vegetative growth","type":"exact"}],"termid":"FYPO:0004846"}


id: MONDO:0005238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poorly differentiated liposarcoma, characterized by the presence of solid sheets of primitive round mesenchymal cells and the absence of myxoid stroma.","definition_xrefs":["NCIT:C4252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myxoid/round cell liposarcoma","termid":"MONDO:0020561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"round cell liposarcoma","secondary_identifiers":["ICDO:8853/3","UMLS:C0334471","EFO:0003084","MEDGEN:90787","SCTID:404070007","DOID:5692","ICD9:171.9"],"synonyms":[{"name":"cellular myxoid liposarcoma","type":"exact"},{"name":"round cell liposarcoma","type":"exact"},{"name":"round cell liposarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0005238","xrefs":{"Monarch":{"xref_id":"0005238"}}}


id: GO:0032589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a neuron projection.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"neuron projection membrane","termid":"GO:0032589"}


id: PBO:0083532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SPT4/YGR063C","termid":"PBO:0083532"}


id: MONDO:0021049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the vulva. Representative examples include Bartholin gland adenoma, vulvar nodular hidradenoma, vulvar carcinoma, and vulvar melanoma.","definition_xrefs":["NCIT:C3443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar disease","termid":"MONDO:0002187"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar neoplasm","secondary_identifiers":["SCTID:126922007","UMLS:C0042995","ICD9:239.5","MEDGEN:22689"],"synonyms":[{"name":"mammalian vulva neoplasm","type":"exact"},{"name":"mammalian vulva neoplasm (disease)","type":"exact"},{"name":"mammalian vulva tumor","type":"exact"},{"name":"mammalian vulva tumour","type":"exact"},{"name":"neoplasm of mammalian vulva","type":"exact"},{"name":"neoplasm of the vulva","type":"exact"},{"name":"neoplasm of vulva","type":"exact"},{"name":"tumor of mammalian vulva","type":"exact"},{"name":"tumor of the vulva","type":"exact"},{"name":"tumor of vulva","type":"exact"},{"name":"tumour of mammalian vulva","type":"exact"},{"name":"tumour of the vulva","type":"exact"},{"name":"tumour of vulva","type":"exact"},{"name":"vulva neoplasm","type":"exact"},{"name":"vulva tumor","type":"exact"},{"name":"vulva tumour","type":"exact"},{"name":"vulval neoplasm","type":"exact"},{"name":"vulvar neoplasm","type":"exact"},{"name":"vulvar tumor","type":"exact"},{"name":"vulvar tumour","type":"exact"}],"termid":"MONDO:0021049","xrefs":{"Monarch":{"xref_id":"0021049"}}}


id: PBO:0076380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin precursor 1","termid":"PBO:0076380"}


id: FYPO:0009074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing serine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on serine nitrogen source","synonyms":[{"name":"increased growth on serine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on serine nitrogen source","type":"exact"}],"termid":"FYPO:0009074"}


id: PBO:0090710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin, implicated in vesicle-mediated transport, meiosis specific","termid":"PBO:0090710"}


id: PBO:0085489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proline oxidase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; PUT1 transcription is induced by Put3p in the presence of proline and the absence of a preferred nitrogen source","termid":"PBO:0085489"}


id: GO:0032616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-13 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-13 production","secondary_identifiers":["GO:0042231","GO:0072611"],"synonyms":[{"name":"IL-13 production","type":"exact"},{"name":"interleukin-13 biosynthetic process","type":"narrow"},{"name":"interleukin-13 secretion","type":"narrow"}],"termid":"GO:0032616"}


id: GO:0042670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell differentiation","termid":"GO:0042670"}


id: PBO:0079016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TruB pseudouridine synthase family member 1","termid":"PBO:0079016"}


id: GO:0000500
data:
  {"annotated_genes":["SJAG_02747","SJAG_04083","SJAG_04766","SJAG_05331"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73862,80988,95035,107213],"is_not":false,"summary":null,"term":"GO:0000500"}]},"cv_name":"cellular_component","definition":"A complex required for the transcription of rDNA by RNA polymerase I. In yeast the complex consists of Rrrn5p, Rrn9p, Rrn10p, histones H3 and H4, and Uaf30p.","definition_xrefs":["PMID:11500378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulator complex","termid":"GO:0000120"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02747":null,"SJAG_04083":null,"SJAG_04766":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005730","GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase I upstream activating factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase I upstream activation factor complex","type":"exact"},{"name":"UAF","type":"exact"}],"termid":"GO:0000500","terms_by_termid":{"GO:0000500":null}}


id: MONDO:0006736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal development of immature squamous epithelial cells of the uterine cervix, a term used to describe premalignant cytological changes in the cervical epithelium. These atypical cells do not penetrate the epithelial basement membrane.","definition_xrefs":["MESH:D002578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplasia of cervix","secondary_identifiers":["UMLS:C0007868","MedDRA:10013957","ICD9:622.1","EFO:1000910","SCTID:73391008","ICD9:622.11","ICD9:622.10","MEDGEN:2971"],"termid":"MONDO:0006736","xrefs":{"Monarch":{"xref_id":"0006736"}}}


id: GO:0099615
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113750],"is_not":false,"summary":null,"term":"GO:0099615"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxyglutarate + pyruvate = alpha-ketoglutarate + D-lactate, with FAD functioning as an intermediate hydrogen acceptor.","definition_xrefs":["PMID:26774271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(D)-2-hydroxyglutarate-pyruvate transhydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-2HG-pyruvate transhydrogenase activity","type":"exact"},{"name":"R-2-hydroxyglutarate alpha-pyruvate transhydrogenase activity","type":"exact"}],"termid":"GO:0099615","terms_by_termid":{"GO:0099615":null}}


id: MONDO:0031949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic neurovascular malformation (obsolete MONDO:0031949)","secondary_identifiers":["Orphanet:371436"],"termid":"MONDO:0031949","xrefs":{"Monarch":{"xref_id":"0031949"}}}


id: PBO:0041237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 94","termid":"PBO:0041237"}


id: PBO:0053628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 673","termid":"PBO:0053628"}


id: PBO:0040992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2 pseudogene 2","termid":"PBO:0040992"}


id: PBO:0091091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex III assembly protein Cbp4","termid":"PBO:0091091"}


id: GO:1990628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex consisting of RseA, RseB and RpoE. It form the inactive form of the sigma-E transcription factor. In response to stress, outer membrane proteins accumulate in the periplasm and activate cleavage of RseA periplasmic domain by DegS, triggering a proteolytic cascade that frees sigma-E to activate gene expression. RseB binding to RseA prevents activated DegS from cleaving RseA. Sigma-E-mediated envelope stress response is the major pathway to ensure homeostasis in the envelope compartment of the cell.","definition_xrefs":["GOC:bhm","PMID:20190044"],"gene_count":0,"genotype_count":0,"name":"obsolete Sigma-E factor negative regulation complex (obsolete GO:1990628)","synonyms":[{"name":"RseA-RseB-RpoE complex","type":"related"},{"name":"Sigma-E factor negative regulation complex","type":"exact"}],"termid":"GO:1990628"}


id: PBO:0005505
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.4.1.8","termid":"PBO:0005505"}


id: PBO:0003202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U4","termid":"PBO:0003202"}


id: PBO:0043143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 11","termid":"PBO:0043143"}


id: MONDO:0004439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the periocular region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periocular meningioma","secondary_identifiers":["NCIT:C6777","DOID:8030","UMLS:C1335383","MEDGEN:233849"],"termid":"MONDO:0004439","xrefs":{"Monarch":{"xref_id":"0004439"}}}


id: PBO:0040353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 2","termid":"PBO:0040353"}


id: GO:0072059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cortical collecting duct over time, from its formation to the mature structure. The cortical collecting duct is the portion of the collecting duct that resides in the renal cortex.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cortical collecting duct development","termid":"GO:0072059"}


id: PBO:0036313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase-activating protein Spa2","termid":"PBO:0036313"}


id: MONDO:0035249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare coronary artery congenital malformation characterized by an anomalous origin and course of the left coronary artery, which originates from the right aortic sinus of Valsalva and has an abnormal proximal course, which may be intramural, prepulmonic, subpulmonic, retroaortic, retrocardiac or wrapped around the apex. Patients are frequently asymptomatic, although chest pain, dyspnea, palpitations, dizziness, syncope, and sudden cardiac arrest/death (typically following intense physical exertion) may be observed. This malformation is associated with a high risk of sudden cardiac death so surgical revascularization is recommended even in cases with no associated evidence of myocardial ischemia. [Orphanet:541443]","definition_xrefs":["Orphanet:541443"],"gene_count":0,"genotype_count":0,"name":"obsolete anomalous aortic origin of the left coronary artery (obsolete MONDO:0035249)","secondary_identifiers":["ICD10CM:Q24.5"],"termid":"MONDO:0035249","xrefs":{"Monarch":{"xref_id":"0035249"}}}


id: PR:O42895
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- afg1 gene.","definition_xrefs":["UniProtKB:O42895","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C115.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC115.02c","synonyms":[{"name":"Spom972h-afg1","type":"exact"}],"termid":"PR:O42895"}


id: PBO:0040547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta 3-glucosyltransferase","termid":"PBO:0040547"}


id: PBO:0012054
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as Ino80 complex subunit, possibly incorrect","termid":"PBO:0012054"}


id: GO:0004344
data:
  {"annotated_genes":["SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + acceptor = D-glucono-1,5-lactone + reduced acceptor.","definition_xrefs":["PMID:22027299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucose dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:24540","EC:1.1.99.35","GO:0008708"],"synonyms":[{"name":"glucose dehydrogenase (acceptor) activity","type":"exact"},{"name":"soluble glucose dehydrogenase","type":"exact"}],"termid":"GO:0004344","terms_by_termid":{"GO:0047935":null}}


id: GO:1904009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium glutamate stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:20704590"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to monosodium glutamate (obsolete GO:1904009)","termid":"GO:1904009"}


id: PBO:0086308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with NADP(H) oxidoreductase activity; transcription is regulated by Stb5p in response to NADPH depletion induced by diamide; promoter contains a putative Stb5p binding site; protein abundance increases in response to DNA replication stress","termid":"PBO:0086308"}


id: PBO:0083341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene APM2/YHL019C","termid":"PBO:0083341"}


id: GO:0036458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a hepatocyte growth factor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"hepatocyte growth factor binding","synonyms":[{"name":"HGF binding","type":"exact"}],"termid":"GO:0036458"}


id: GO:0075240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zoospore formation, a process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangiospore formation","termid":"GO:0075286"},{"relation_name":"regulates","term_name":"zoospore formation","termid":"GO:0075239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of zoospore formation","termid":"GO:0075240"}


id: PBO:0027418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_Golgi_apparatus","termid":"PBO:0027418"}


id: MONDO:1012320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"high-frequency tremor, non-human animal","termid":"MONDO:1011796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-frequency tremor, pig","secondary_identifiers":["OMIA:001200-9823"],"termid":"MONDO:1012320","xrefs":{"Monarch":{"xref_id":"1012320"}}}


id: MONDO:0001283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign pathologic process characterized by the transformation of the mesothelium into fallopian tube epithelium. It occurs in the peritoneum and may affect the serosa surface of the uterus and the adnexa. It may be asymptomatic or present as pelvic pain.","definition_xrefs":["NCIT:C40121"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endometriosis","termid":"MONDO:0005133"},{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosalpingiosis","secondary_identifiers":["UMLS:C0269106","DOID:11427","SCTID:55850004","MEDGEN:78704"],"synonyms":[{"name":"endosalpingiosis","type":"exact"}],"termid":"MONDO:0001283","xrefs":{"Monarch":{"xref_id":"0001283"}}}


id: PBO:0079693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 1","termid":"PBO:0079693"}


id: MONDO:0013503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial chronic mucocutaneous candidiasis in which the cause of the disease is a mutation in the IL17F gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"candidiasis, familial, 6","secondary_identifiers":["MEDGEN:462755","GARD:15093","OMIM:613956","UMLS:C3151405"],"synonyms":[{"name":"CANDF6","type":"related"},{"name":"IL17F familial chronic mucocutaneous candidiasis","type":"exact"},{"name":"candidiasis, familial chronic mucocutaneous, autosomal dominant","type":"related"},{"name":"candidiasis, familial, 6","type":"exact"},{"name":"candidiasis, familial, 6, autosomal dominant","type":"exact"},{"name":"candidiasis, familial, type 6","type":"exact"},{"name":"familial chronic mucocutaneous candidiasis caused by mutation in IL17F","type":"exact"}],"termid":"MONDO:0013503","xrefs":{"Monarch":{"xref_id":"0013503"}}}


id: PBO:0080782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 2","termid":"PBO:0080782"}


id: GO:0036362
data:
  {"annotated_genes":["SJAG_04236","SJAG_02626"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119800,120174],"is_not":false,"summary":null,"term":"GO:0036362"}]},"cv_name":"cellular_component","definition":"A double layer of lipid molecules that surrounds an ascus, a capsule containing the sexual spores in some fungi.","definition_xrefs":["GOC:vw","GOC:mcc","PMID:21900489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02626":null,"SJAG_04236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ascus membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036362","terms_by_termid":{"GO:0036362":null}}


id: MONDO:0022802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Collins-Sakati syndrome","synonyms":[{"name":"Collins Sakati syndrome","type":"related"}],"termid":"MONDO:0022802","xrefs":{"Monarch":{"xref_id":"0022802"}}}


id: PBO:0042474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 1","termid":"PBO:0042474"}


id: PR:O13633
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily B member 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02851","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C17A3.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.05c","secondary_identifiers":["UniProtKB:O13633"],"synonyms":[{"name":"Spom972h-DNAJB12","type":"exact"}],"termid":"PR:O13633"}


id: MONDO:0007135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"anonychia-onychodystrophy syndrome","termid":"MONDO:0019577"},{"relation_name":"is_a","term_name":"isolated congenital anonychia","termid":"MONDO:0019211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 6","secondary_identifiers":["MEDGEN:477175","OMIM:107000","UMLS:C3275544","DOID:0080084","GARD:15040"],"synonyms":[{"name":"NDNC6","type":"related"},{"name":"absent nails and dystrophic nails","type":"related"},{"name":"anonychia, partial","type":"related"},{"name":"anonychia/hyponychia and onychodystrophy","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 6","type":"related"},{"name":"nonsyndromic congenital nail disorder type 6","type":"exact"},{"name":"onychodystrophy-anonychia","type":"related"}],"termid":"MONDO:0007135","xrefs":{"Monarch":{"xref_id":"0007135"}}}


id: GO:0071176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch2 (ICN2), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN2 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch2 complex","type":"exact"}],"termid":"GO:0071176"}


id: MOD:00961
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively reduces the disulfide bond of cystine to form two cysteine residues.","definition_xrefs":["DeltaMass:333"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-cystine (cross-link)","termid":"MOD:00034"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"hydrogenated residue","termid":"MOD:01473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"reduction of disulfide crosslink in cystine to two cysteines","termid":"MOD:00961"}


id: GO:0098556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the rough endoplasmic reticulum membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endoplasmic reticulum membrane","termid":"GO:0098554"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005789","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"cytoplasmic side of rough endoplasmic reticulum membrane","termid":"GO:0098556"}


id: MONDO:0002281
data:
  {"annotated_genes":["SJAG_03424","SJAG_01548","SJAG_03447"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[87556,87557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"}]},"cv_name":"mondo","definition":"Anemia that is characterized by increased red blood cell volume.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01548":null,"SJAG_03424":null,"SJAG_03447":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"macrocytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0001972","NCIT:C34381","SCTID:83414005","UMLS:C0002886","MESH:D000748","MEDGEN:1920","DOID:2361"],"synonyms":[{"name":"D22S676","type":"exact"},{"name":"D22S750","type":"exact"},{"name":"anaemia macrocytic","type":"exact"},{"name":"anemia macrocytic","type":"exact"},{"name":"macrocytic Anaemia","type":"exact"},{"name":"macrocytic Anemia","type":"exact"},{"name":"macrocytic anaemia (disease)","type":"exact"},{"name":"macrocytic anaemia of unspecified cause","type":"exact"},{"name":"macrocytic anemia","type":"exact"},{"name":"macrocytic anemia (disease)","type":"exact"},{"name":"macrocytic anemia of unspecified cause","type":"exact"}],"termid":"MONDO:0002281","terms_by_termid":{"MONDO:0007925":null,"MONDO:0009238":null},"xrefs":{"Monarch":{"xref_id":"0002281"}}}


id: PBO:0074176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 3","termid":"PBO:0074176"}


id: GO:0004323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O.","definition_xrefs":["EC:1.16.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete multicopper ferroxidase iron transport mediator activity (obsolete GO:0004323)","synonyms":[{"name":"multicopper ferroxidase iron transport mediator activity","type":"exact"}],"termid":"GO:0004323"}


id: GO:1902266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of abscisic acid within a cell.","definition_xrefs":["PMID:23252460","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"abscisic acid homeostasis","termid":"GO:1902265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular abscisic acid homeostasis","synonyms":[{"name":"cellular 2-cis-abscisate homeostasis","type":"exact"},{"name":"cellular ABA homeostasis","type":"related"}],"termid":"GO:1902266"}


id: PATO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A relational quality of occurrent inhering in a bearer by virtue of the bearer's ability to consume a resource.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000187 consumption quality (obsolete PATO:0000187)","synonyms":[{"name":"propensity to consume","type":"related"}],"termid":"PATO:0000187"}


id: GO:0030271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage: Phe-Xaa > Tyr-Xaa > Trp-Xaa > Leu-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chymase activity (obsolete GO:0030271)","synonyms":[{"name":"SK protease activity","type":"related"},{"name":"chymase activity","type":"exact"},{"name":"mast cell protease I activity","type":"narrow"},{"name":"mast cell serine proteinase","type":"narrow"},{"name":"skeletal muscle (SK) protease activity","type":"narrow"},{"name":"skeletal muscle protease","type":"narrow"},{"name":"skin chymotryptic proteinase","type":"narrow"}],"termid":"GO:0030271"}


id: PBO:0062769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily W member 1","termid":"PBO:0062769"}


id: FYPO:0007058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to vacuole","synonyms":[{"name":"normal protein localisation to vacuole","type":"exact"},{"name":"normal protein localization in vacuole","type":"exact"},{"name":"normal protein localization to vacuole during mitotic cell cycle","type":"related"},{"name":"normal protein localization to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0007058"}


id: PBO:0044162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 pseudogene 2","termid":"PBO:0044162"}


id: MONDO:0015034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type A (LCHa) is a form of lissencephaly with cerebellar hypoplasia that encompasses classical lissencephaly with thickened cortical gray matter with either no discernible gradient, a gradient with posterior predominance, or a gradient with anterior predominance, and cerebellar vermis hypoplasia.","definition_xrefs":["Orphanet:100011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type A","secondary_identifiers":["UMLS:C5191423","GARD:19731","MEDGEN:1679234","icd11.foundation:853428618"],"termid":"MONDO:0015034","xrefs":{"Monarch":{"xref_id":"0015034"}}}


id: FYPO:0006080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to nuclear exosome foci is normal (i.e. indistinguishable from wild type). Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PMID:21317872","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nuclear exosome focus during vegetative growth","synonyms":[{"name":"normal protein localisation to nuclear exosome focus during vegetative growth","type":"exact"},{"name":"normal protein localization to Mmi1 focus during vegetative growth","type":"exact"},{"name":"normal protein localization to Mmi1 nuclear focus during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear exosome foci during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006080"}


id: PBO:0077552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM258 pseudogene 2","termid":"PBO:0077552"}


id: FYPO:0005758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication from late-firing origins is abnormal.","definition_xrefs":["GO:0101017","PomBase:mah","PMID:22987637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation from late origin","synonyms":[{"name":"abnormal regulation of DNA replication initiation from late origin during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of late origin firing timing","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation at late origin","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late origin during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late replication origin","type":"exact"}],"termid":"FYPO:0005758"}


id: PBO:0058452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5091","termid":"PBO:0058452"}


id: PBO:0054502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1902","termid":"PBO:0054502"}


id: GO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stable binary complex of a semaphorin and a plexin, together forming a functional semaphorin receptor.","definition_xrefs":["GOC:hjd","PMID:10934324","PMID:12613544","PMID:12367632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"semaphorin receptor complex","synonyms":[{"name":"plexin-neurophilin complex","type":"exact"}],"termid":"GO:0002116"}


id: MONDO:0004068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of anatomical entity (obsolete MONDO:0004068)","termid":"MONDO:0004068","xrefs":{"Monarch":{"xref_id":"0004068"}}}


id: PBO:0072202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 1","termid":"PBO:0072202"}


id: GO:0042890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of 3-phenylpropionic acid from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-phenylpropionic acid transmembrane transporter activity (obsolete GO:0042890)","synonyms":[{"name":"3-phenylpropionate acid transporter activity","type":"exact"},{"name":"HCA transporter activity","type":"exact"},{"name":"hydrocinnamic acid transporter activity","type":"exact"}],"termid":"GO:0042890"}


id: MOD:01913
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of an L-tryptophan residue with one chlorine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated tryptophan","termid":"MOD:01068"},{"relation_name":"is_a","term_name":"monochlorinated residue","termid":"MOD:01911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochlorinated L-tryptophan","synonyms":[{"name":"Cl1Trp","type":"exact"}],"termid":"MOD:01913"}


id: GO:0047905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose 6-phosphate + phosphate = acetyl phosphate + D-erythrose 4-phosphate + H2O.","definition_xrefs":["EC:4.1.2.22","MetaCyc:FRUCTOSE-6-PHOSPHATE-PHOSPHOKETOLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"fructose-6-phosphate phosphoketolase activity","secondary_identifiers":["RHEA:12196"],"synonyms":[{"name":"D-fructose-6-phosphate D-erythrose-4-phosphate-lyase (adding phosphate; acetyl-phosphate-forming)","type":"related"},{"name":"D-fructose-6-phosphate D-erythrose-4-phosphate-lyase (phosphate-acetylating) activity","type":"related"}],"termid":"GO:0047905"}


id: PBO:0045894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 6","termid":"PBO:0045894"}


id: MONDO:0003349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the central nervous system. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C6999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"malignant central nervous system mesenchymal, non-meningothelial neoplasm","termid":"MONDO:0037740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system leiomyosarcoma","secondary_identifiers":["MEDGEN:235254","UMLS:C1334385","DOID:5254"],"synonyms":[{"name":"CNS leiomyosarcoma","type":"exact"},{"name":"central nervous system leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of CNS","type":"exact"},{"name":"leiomyosarcoma of central nervous system","type":"exact"},{"name":"leiomyosarcoma of the CNS","type":"exact"},{"name":"leiomyosarcoma of the central nervous system","type":"exact"}],"termid":"MONDO:0003349","xrefs":{"Monarch":{"xref_id":"0003349"}}}


id: PBO:0066801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 100","termid":"PBO:0066801"}


id: PBO:0065792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 1","termid":"PBO:0065792"}


id: MONDO:0002591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dendritic cell thymoma (obsolete MONDO:0002591)","termid":"MONDO:0002591","xrefs":{"Monarch":{"xref_id":"0002591"}}}


id: MONDO:0013315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PDE6G gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PDE6G-related retinopathy","termid":"MONDO:1040034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 57","secondary_identifiers":["ICD10CM:H35.5","DOID:0110407","GARD:15679","MEDGEN:462171","UMLS:C3150821","OMIM:613582"],"synonyms":[{"name":"PDE6G retinitis pigmentosa","type":"exact"},{"name":"RP57","type":"exact"},{"name":"retinitis pigmentosa 57","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PDE6G","type":"exact"},{"name":"retinitis pigmentosa type 57","type":"exact"}],"termid":"MONDO:0013315","xrefs":{"Monarch":{"xref_id":"0013315"}}}


id: PBO:0072025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S9 pseudogene 1","termid":"PBO:0072025"}


id: PBO:0056081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member S","termid":"PBO:0056081"}


id: PBO:0071035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 37","termid":"PBO:0071035"}


id: PR:Q9USR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cnp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USR9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.01c","synonyms":[{"name":"CENP-C homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cnp3","type":"exact"}],"termid":"PR:Q9USR9"}


id: PBO:0061392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 52","termid":"PBO:0061392"}


id: PBO:0081393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF232 antisense RNA 1","termid":"PBO:0081393"}


id: MONDO:0011715
data:
  {"annotated_genes":["SJAG_01076"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88522],"is_not":false,"summary":null,"term":"MONDO:0011715"}]},"cv_name":"mondo","definition":"Any Seckel syndrome in which the cause of the disease is a mutation in the RBBP8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Seckel syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1847572","GARD:15399","MEDGEN:338264","MESH:C537534","DOID:0070013","OMIM:606744"],"synonyms":[{"name":"RBBP8 Seckel syndrome","type":"exact"},{"name":"SCKL2","type":"exact"},{"name":"Seckel syndrome 2","type":"exact"},{"name":"Seckel syndrome caused by mutation in RBBP8","type":"exact"},{"name":"Seckel syndrome type 2","type":"exact"},{"name":"Seckel-type dwarfism 2","type":"exact"},{"name":"microcephalic primordial dwarfism 2","type":"exact"}],"termid":"MONDO:0011715","terms_by_termid":{"MONDO:0011715":null},"xrefs":{"Monarch":{"xref_id":"0011715"}}}


id: GO:0044374
data:
  {"annotated_genes":["SJAG_04855","SJAG_04009","SJAG_05153"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"},{"annotations":[110780,109005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"}]},"cv_name":"molecular_function","definition":"The activity of binding selectively and non-covalently to DNA in a sequence-specific manner and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["GOC:vw","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding, bending","termid":"GO:0008301"},{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04009":null,"SJAG_04855":null,"SJAG_05153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"sequence-specific DNA binding, bending","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA bending involving sequence-specific DNA binding","type":"exact"}],"termid":"GO:0044374","terms_by_termid":{"GO:0044377":null,"GO:0110035":null}}


id: MONDO:0004367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the petroclival region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"petroclival meningioma","secondary_identifiers":["UMLS:C1335395","NCIT:C5278","MEDGEN:277511","DOID:7818"],"termid":"MONDO:0004367","xrefs":{"Monarch":{"xref_id":"0004367"}}}


id: SO:0000238
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable element with extensive secondary structure, characterized by large modular imperfect long inverted repeats.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foldback_element","synonyms":[{"name":"LVR element","type":"related"},{"name":"foldback element","type":"exact"},{"name":"long inverted repeat element","type":"related"}],"termid":"SO:0000238"}


id: PBO:0074702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 71B","termid":"PBO:0074702"}


id: PBO:0047610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin homology 2 domain containing 1","termid":"PBO:0047610"}


id: GO:0034939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-hydroxypyrrole-2-carboxylate = 5-oxo-4,5-dihydropyrrole-2-carboxylate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-hydroxypyrrole-2-carboxylate tautomerase activity (obsolete GO:0034939)","termid":"GO:0034939"}


id: MONDO:0014974
data:
  {"annotated_genes":["SJAG_02679","SJAG_01875"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88816,88817],"is_not":false,"summary":null,"term":"MONDO:0014974"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01875":null,"SJAG_02679":null},"genotype_count":0,"is_obsolete":false,"name":"sudden cardiac failure, alcohol-induced","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934630","OMIM:617223","UMLS:C4310663"],"synonyms":[{"name":"SCFAI","type":"exact"},{"name":"sudden Cardiac failure, alcohol-induced","type":"exact"},{"name":"sudden cardiac failure, alcohol-induced; SCFAI","type":"exact"}],"termid":"MONDO:0014974","terms_by_termid":{"MONDO:0014974":null},"xrefs":{"Monarch":{"xref_id":"0014974"}}}


id: GO:0002315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell in the spleen acquires the specialized features of a marginal zone B cell. Marginal zone B cells are localized in a distinct anatomical region of the spleen that represents the major antigen-filtering and scavenging area (by specialized macrophages resident there). It appears that they are preselected to express a BCR repertoire similar to B-1 B cells, biased toward bacterial cell wall constituents and senescent self-components (such as oxidized LDL).","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"marginal zone B cell differentiation","synonyms":[{"name":"marginal zone B cell development","type":"related"},{"name":"marginal zone B lymphocyte differentiation","type":"exact"},{"name":"marginal zone B-cell differentiation","type":"exact"},{"name":"marginal zone B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002315"}


id: GO:0044335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in neural crest cell differentiation.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in neural crest cell differentiation (obsolete GO:0044335)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in neural crest cell differentiation","type":"exact"}],"termid":"GO:0044335"}


id: GO:0031121
data:
  {"annotated_genes":["SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031025"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins at the midpoint of a cell.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"equatorial microtubule organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equatorial microtubule organisation","type":"exact"},{"name":"equatorial microtubule organization and biogenesis","type":"related"}],"termid":"GO:0031121","terms_by_termid":{"GO:0031025":null}}


id: FYPO:0004460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more regulation of mitotic cell cycle RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) when the cell is subject to nitrogen starvation. Regulation of mitotic cell cycle RNAs are transcribed from genes whose products are involved in regulation of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen starvation","synonyms":[{"name":"decreased level of mitotic cell cycle regulation gene mRNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene RNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen depletion","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen deprivation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene transcripts nitrogen starvation","type":"exact"},{"name":"decreased regulation of mitotic cell cycle gene mRNA accumulation during nitrogen starvation","type":"related"},{"name":"reduced level of regulation of mitotic cell cycle gene mRNA during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004460"}


id: PBO:0059587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial amidoxime reducing component 2","termid":"PBO:0059587"}


id: GO:0030261
data:
  {"annotated_genes":["SJAG_03567","SJAG_00207","SJAG_01873","SJAG_00871","SJAG_03942","SJAG_05032","SJAG_01837","SJAG_03682","SJAG_03832","SJAG_03161","SJAG_05193","SJAG_03048","SJAG_00646","SJAG_00768"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010032"},{"annotations":[113667,89835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990893"},{"annotations":[78546,67847,73557,62305,72234,108139,73947,99651,106566,61475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007076"},{"annotations":[118682,104297],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null,"SJAG_00768":null,"SJAG_00871":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03567":null,"SJAG_03682":null,"SJAG_03832":null,"SJAG_03942":null,"SJAG_05032":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chromosome condensation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0000068"],"synonyms":[{"name":"DNA condensation","type":"broad"},{"name":"eukaryotic chromosome condensation","type":"exact"},{"name":"nuclear chromosome condensation","type":"exact"}],"termid":"GO:0030261","terms_by_termid":{"GO:0007076":null,"GO:0010032":null,"GO:1903380":null,"GO:1990893":null}}


id: GO:0042630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of deprivation of water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to water deprivation","synonyms":[{"name":"behavioral response to drought","type":"exact"},{"name":"behavioral response to thirst","type":"exact"},{"name":"behavioural response to water deprivation","type":"exact"}],"termid":"GO:0042630"}


id: PBO:0066869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 169","termid":"PBO:0066869"}


id: GO:0050005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA = 3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA + H2O.","definition_xrefs":["RHEA:24144","EC:4.2.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isohexenylglutaconyl-CoA hydratase activity","secondary_identifiers":["KEGG_REACTION:R03493","UM-BBD_reactionID:r1167","MetaCyc:ISOHEXENYLGLUTACONYL-COA-HYDRATASE-RXN"],"synonyms":[{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA hydro-lyase [3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA-forming]","type":"related"},{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA hydro-lyase activity","type":"related"},{"name":"3-hydroxy-3-isohexenylglutaryl-CoA-hydrolase activity","type":"related"},{"name":"beta-isohexenylglutaconyl-CoA-hydratase activity","type":"related"},{"name":"isohexenylglutaconyl coenzyme A hydratase activity","type":"related"}],"termid":"GO:0050005"}


id: MONDO:0021229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the ciliary body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary body disorder","termid":"MONDO:0002970"},{"relation_name":"is_a","term_name":"iris neoplasm","termid":"MONDO:0021224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ciliary body neoplasm","secondary_identifiers":["NCIT:C4364","UMLS:C0339349","MEDGEN:137916"],"synonyms":[{"name":"ciliary body neoplasm (disease)","type":"exact"},{"name":"ciliary body tumor","type":"exact"},{"name":"ciliary body tumour","type":"exact"},{"name":"neoplasm of ciliary body","type":"exact"},{"name":"neoplasm of the ciliary body","type":"exact"},{"name":"tumor of ciliary body","type":"exact"},{"name":"tumor of the ciliary body","type":"exact"},{"name":"tumour of ciliary body","type":"exact"},{"name":"tumour of the ciliary body","type":"exact"}],"termid":"MONDO:0021229","xrefs":{"Monarch":{"xref_id":"0021229"}}}


id: SO:0001267
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a small noncoding RNA that participates in the processing or chemical modifications of many RNAs, including ribosomal RNAs and spliceosomal RNAs.","direct_ancestors":[{"relation_name":"has_quality","term_name":"snoRNA_encoding","termid":"SO:0000578"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA_gene","synonyms":[{"name":"snoRNA gene","type":"exact"}],"termid":"SO:0001267"}


id: PBO:0081669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 592","termid":"PBO:0081669"}


id: PBO:0017085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug112","termid":"PBO:0017085"}


id: SO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequencer read of a genomic DNA substrate.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_DNA_read","synonyms":[{"name":"gDNA read","type":"exact"},{"name":"gDNA_read","type":"exact"},{"name":"genomic DNA read","type":"exact"}],"termid":"SO:0001828"}


id: GO:2000467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycogen (starch) synthase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of glycogen (starch) synthase activity","termid":"GO:2000465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycogen (starch) synthase activity","synonyms":[{"name":"positive regulation of UDP-glucose-glycogen glucosyltransferase activity","type":"exact"},{"name":"positive regulation of UDP-glucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"positive regulation of UDP-glycogen synthase activity","type":"exact"},{"name":"positive regulation of UDPG-glycogen synthetase activity","type":"exact"},{"name":"positive regulation of UDPG-glycogen transglucosylase activity","type":"exact"},{"name":"positive regulation of UDPglucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"positive regulation of glycogen (starch) synthetase activity","type":"exact"},{"name":"positive regulation of uridine diphosphoglucose-glycogen glucosyltransferase activity","type":"exact"}],"termid":"GO:2000467"}


id: FYPO:0000579
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121518,121521],"is_not":false,"summary":null,"term":"FYPO:0000579"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which spore germination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spore germination","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01355","SJAG_00601"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"synonyms":[{"name":"normal spore germination frequency","type":"related"},{"name":"normal spore viability","type":"related"},{"name":"spore germination: normal","type":"related"}],"termid":"FYPO:0000579","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000579":null}}


id: MOD:00842
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms of or groups containing (13)C.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope labeled residue","termid":"MOD:00702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(13)C labeled residue","termid":"MOD:00842"}


id: GO:1905540
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-7 (IL-7) and that consists of, at a minimum, an interleukin, an alpha and a gamma chain as well as optional additional kinase subunits. The alpha chain binds IL-7 with high affinity and subsequently binds the cytokine receptor common gamma chain that forms part of multiple interleukin receptors.","definition_xrefs":["PMID:19141282","GO_REF:0000088","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interleukin-7 receptor complex","synonyms":[{"name":"IL-7 receptor complex","type":"exact"},{"name":"IL-7-receptor complex","type":"exact"},{"name":"IL7 receptor complex","type":"exact"},{"name":"IL7-receptor complex","type":"exact"}],"termid":"GO:1905540"}


id: PBO:0073627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 11","termid":"PBO:0073627"}


id: PBO:0054664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2070","termid":"PBO:0054664"}


id: GO:0050615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 17-O-acetylnorajmaline + NADP+ = 1,2-dihydrovomilenine + H+ + NADPH.","definition_xrefs":["RHEA:12320","EC:1.3.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,2-dihydrovomilenine reductase activity","secondary_identifiers":["MetaCyc:1.3.1.73-RXN","KEGG_REACTION:R05879"],"synonyms":[{"name":"17-O-acetylnorajmaline:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050615"}


id: PATO:0000735
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000735 limb tone value (obsolete PATO:0000735)","termid":"PATO:0000735"}


id: PBO:0001152
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.11.17","termid":"PBO:0001152"}


id: GO:0140921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thermomorphogenesis.","definition_xrefs":["PMID:27250752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of thermomorphogenesis","termid":"GO:0140920"},{"relation_name":"negatively_regulates","term_name":"thermomorphogenesis","termid":"GO:0140919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thermomorphogenesis","termid":"GO:0140921"}


id: PBO:0110371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABRA6 antisense RNA 1","termid":"PBO:0110371"}


id: MONDO:0700247
data:
  {"annotated_genes":["SJAG_04938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014296"}]},"cv_name":"mondo","definition":"Group of diseases encompassing a spectrum of disorders characterized by Warburg Micro Syndrome (characterized by eye, nervous system, and endocrine abnormalities) and Martsolf Syndrome phenotypes (characterized by similar – but milder – findings). To date Warburg micro syndrome comprises >96% of reported individuals with genetically defined RAB18 deficiency. The hallmark ophthalmologic findings are bilateral congenital cataracts, usually accompanied by microphthalmia, microcornea (diameter <10), and small atonic pupils. Poor vision despite early cataract surgery likely results from progressive optic atrophy and cortical visual impairment. Individuals with Warburg micro syndrome have severe to profound intellectual disability (ID); those with Martsolf syndrome have mild to moderate ID. Some individuals with RAB18 deficiency also have epilepsy. In Warburg micro syndrome, a progressive ascending spastic paraplegia typically begins with spastic diplegia and contractures during the first year, followed by upper-limb involvement leading to spastic quadriplegia after about age five years, often eventually causing breathing difficulties. In Martsolf syndrome infantile hypotonia is followed primarily by slowly progressive lower-limb spasticity. Hypogonadism – when present – manifests in both syndromes, in males as micropenis and/or cryptorchidism and in females as hypoplastic labia minora, clitoral hypoplasia, and small introitus.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04938":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"RAB18 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1650928","UMLS:C4750414"],"synonyms":[{"name":"Warburg micro spectrum","type":"exact"}],"termid":"MONDO:0700247","terms_by_termid":{"MONDO:0014296":null},"xrefs":{"Monarch":{"xref_id":"0700247"}}}


id: PBO:0072436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29","termid":"PBO:0072436"}


id: MONDO:0012234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete LFS3 (obsolete MONDO:0012234)","termid":"MONDO:0012234","xrefs":{"Monarch":{"xref_id":"0012234"}}}


id: RO:0002523
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of bounds sequence of","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_bound_by_sequence_of","termid":"RO:0002523"}


id: MOD:00683
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes neutral hydrogen atoms (proton and electron) from a residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized residue","termid":"MOD:00675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenated residue","synonyms":[{"name":"dHRes","type":"exact"}],"termid":"MOD:00683"}


id: MONDO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis caused by outdoor allergens.","definition_xrefs":["NCIT:C92188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic rhinitis","termid":"MONDO:0011786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"seasonal allergic rhinitis","secondary_identifiers":["UMLS:C0018621","MEDGEN:42335","MESH:D006255","EFO:0003956","SCTID:367498001"],"synonyms":[{"name":"hay fever","type":"exact"},{"name":"seasonal allergic rhinitis","type":"exact"}],"termid":"MONDO:0005324","xrefs":{"Monarch":{"xref_id":"0005324"}}}


id: PBO:0111744
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-fungal Zn(2)-Cys(6) binuclear cluster domain","termid":"PBO:0111744"}


id: PR:Q09825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sad1 gene.","definition_xrefs":["UniProtKB:Q09825","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein sad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.01","synonyms":[{"name":"Spom972h-sad1","type":"exact"}],"termid":"PR:Q09825"}


id: MONDO:0044906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the bladder that involves the transitional epithelium projecting above the surrounding epithelial surface and consisting of villous or arborescent outgrowths of fibrovascular stroma.","definition_xrefs":["NCIT:C39858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder benign neoplasm","termid":"MONDO:0000384"},{"relation_name":"is_a","term_name":"non-invasive bladder papillary urothelial neoplasm","termid":"MONDO:0003822"},{"relation_name":"is_a","term_name":"urothelial papilloma","termid":"MONDO:0004041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder urothelial papilloma","secondary_identifiers":["UMLS:C1384678","MEDGEN:237227"],"synonyms":[{"name":"bladder transitional cell papilloma","type":"exact"},{"name":"bladder urothelial papilloma","type":"exact"},{"name":"urinary bladder transitional cell papilloma","type":"exact"},{"name":"urinary bladder urothelial papilloma","type":"exact"}],"termid":"MONDO:0044906","xrefs":{"Monarch":{"xref_id":"0044906"}}}


id: GO:0051138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation.","definition_xrefs":["PMID:12154375","ISBN:0781735149","PMID:9133426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell differentiation","termid":"GO:0046638"},{"relation_name":"is_a","term_name":"regulation of NK T cell differentiation","termid":"GO:0051136"},{"relation_name":"positively_regulates","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of NK T cell differentiation","synonyms":[{"name":"activation of NK T cell differentiation","type":"narrow"},{"name":"positive regulation of NK T cell development","type":"related"},{"name":"positive regulation of NK T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of NK T-cell differentiation","type":"exact"},{"name":"positive regulation of NK T-lymphocyte differentiation","type":"exact"},{"name":"positive regulation of NKT cell differentiation","type":"exact"},{"name":"positive regulation of NT cell differentiation","type":"exact"},{"name":"positive regulation of natural T cell differentiation","type":"exact"},{"name":"positive regulation of natural killer T cell differentiation","type":"exact"},{"name":"stimulation of NK T cell differentiation","type":"narrow"},{"name":"up regulation of NK T cell differentiation","type":"exact"},{"name":"up-regulation of NK T cell differentiation","type":"exact"},{"name":"upregulation of NK T cell differentiation","type":"exact"}],"termid":"GO:0051138"}


id: PBO:0045907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 5","termid":"PBO:0045907"}


id: GO:1904270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a pyroptosome complex.","definition_xrefs":["PMID:17964261","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"pyroptosome complex assembly","synonyms":[{"name":"ASC pyroptosome assembly","type":"exact"},{"name":"ASC pyroptosome formation","type":"exact"},{"name":"pyroptosome complex formation","type":"exact"}],"termid":"GO:1904270"}


id: PBO:0109388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 17C","termid":"PBO:0109388"}


id: FYPO:0001438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tetracycline.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on tetracycline","synonyms":[{"name":"normal cell population growth in presence of tetracycline","type":"exact"},{"name":"normal cell population growth on tetracycline","type":"exact"},{"name":"normal cellular response to tetracycline","type":"related"},{"name":"normal vegetative cell population growth on tetracycline","type":"exact"}],"termid":"FYPO:0001438"}


id: PBO:0074552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 5","termid":"PBO:0074552"}


id: PBO:0045368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 1","termid":"PBO:0045368"}


id: MONDO:0013105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"basal cell carcinoma, susceptibility to","termid":"MONDO:0100047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell carcinoma, susceptibility to, 5","secondary_identifiers":["OMIM:613062","UMLS:C2751601","MEDGEN:414060"],"synonyms":[{"name":"BCC5","type":"exact"},{"name":"basal cell carcinoma, susceptibility to, 5","type":"exact"}],"termid":"MONDO:0013105","xrefs":{"Monarch":{"xref_id":"0013105"}}}


id: GO:0003929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete RAN small monomeric GTPase activity (obsolete GO:0003929)","synonyms":[{"name":"RAN small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003929"}


id: PBO:0069995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1290, pseudogene","termid":"PBO:0069995"}


id: PBO:0087930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-golgi network aminophospholipid translocase (flippase); type 4 P-type ATPase; involved in phospholipid translocation, contributing to the maintenance of membrane lipid asymmetry in post-Golgi secretory vesicles; role in protein trafficking between the Golgi and endosomal system; localizes to the trans-Golgi network; localizes to the shmoo tip where it has a redundant role in the cellular response to mating pheromone","termid":"PBO:0087930"}


id: PATO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000212 neural function (obsolete PATO:0000212)","termid":"PATO:0000212"}


id: GO:0045181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 L-glutamate + NAD(P)+ = L-glutamine + 2-oxoglutarate + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate synthase activity, NAD(P)H as acceptor (obsolete GO:0045181)","synonyms":[{"name":"glutamate synthase activity, NADH or NADPH as acceptor","type":"related"}],"termid":"GO:0045181"}


id: GO:0046167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol-3-phosphate, a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-3-phosphate metabolic process","termid":"GO:0006072"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate biosynthetic process","synonyms":[{"name":"glycerol-3-phosphate anabolism","type":"exact"},{"name":"glycerol-3-phosphate biosynthesis","type":"exact"},{"name":"glycerol-3-phosphate formation","type":"exact"},{"name":"glycerol-3-phosphate synthesis","type":"exact"}],"termid":"GO:0046167"}


id: PBO:0073537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3PXD2A antisense RNA 1","termid":"PBO:0073537"}


id: GO:0097738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which, in some fungal species, hyphae grow as a network of invasive thread-like filaments formed from chains of attached cells within a solid or semi-solid substrate.","definition_xrefs":["PMID:10021365","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate mycelium formation","termid":"GO:0097738"}


id: PBO:0091120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protease inhibitor 178 family","termid":"PBO:0091120"}


id: MONDO:0044237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypercholesterolemia suppressor (obsolete MONDO:0044237)","secondary_identifiers":["OMIM:144020"],"synonyms":[{"name":"hypercholesterolemia suppressor","type":"related"}],"termid":"MONDO:0044237","xrefs":{"Monarch":{"xref_id":"0044237"}}}


id: GO:0039557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway by reducing the activity of IRF7 (interferon regulatory factor-7). IRF7 a transcription factor in the RIG-I/MDA-5 signaling pathway. Viral infection triggers phosphorylation of cytoplasmic IRF7, which allows IRF7 to form a homodimer, migrate to the nucleus, and activate transcription of IFN-alpha and IFN-beta genes.","definition_xrefs":["PMID:19557165","PMID:16014964","PMID:11943871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF7 activity","secondary_identifiers":["VZ:653"],"synonyms":[{"name":"inhibition of host IRF7 by virus","type":"related"},{"name":"inhibition of host interferon regulatory factor-7 by virus","type":"related"},{"name":"suppression by virus of host IRF7 activity","type":"related"},{"name":"suppression by virus of host interferon regulatory factor 7 activity","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF7 activity","type":"narrow"}],"termid":"GO:0039557"}


id: PBO:0081988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZSCAN16 antisense RNA 1","termid":"PBO:0081988"}


id: GO:0008668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + ATP + holo-[ACP] = 2,3-dihydroxybenzoyl-[ACP] + AMP + diphosphate.","definition_xrefs":["RHEA:61652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"2,3-dihydroxybenzoate--[aryl-carrier protein] ligase","secondary_identifiers":["KEGG_REACTION:R12777","MetaCyc:RXN-19445","EC:6.2.1.71"],"synonyms":[{"name":"(2,3-dihydroxybenzoyl)adenylate synthase activity","type":"narrow"},{"name":"2,3-dihydroxybenzoate-AMP ligase activity","type":"narrow"}],"termid":"GO:0008668"}


id: PBO:0066822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 121","termid":"PBO:0066822"}


id: PBO:0045598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 9 (pseudogene)","termid":"PBO:0045598"}


id: MONDO:1010122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any form of vitiligo characterized by a tan zone of varying width between normal and depigmented skin. This intermediate tan zone has more inflammatory cells, Langerhans cells, and melanophages than vitiliginous or normal skin. The number of melanocytes is greater than in vitiliginous skin but fewer than in normal skin.","definition_xrefs":["PMID:21839315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitiligo","termid":"MONDO:0008661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"trichrome vitiligo","secondary_identifiers":["SCTID:403270009","MEDGEN:697977","UMLS:C1274649"],"termid":"MONDO:1010122","xrefs":{"Monarch":{"xref_id":"1010122"}}}


id: FYPO:0000202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of cytokinetic cell separation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of cytokinetic cell separation","synonyms":[{"name":"abnormal regulation of cell separation after cytokinesis","type":"exact"},{"name":"abnormal regulation of cell separation following cytokinesis","type":"exact"},{"name":"abnormal regulation of cytokinetic cell separation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of cytokinetic cell separation during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic cytokinetic cell separation","type":"exact"}],"termid":"FYPO:0000202"}


id: GO:0070585
data:
  {"annotated_genes":["SJAG_00569","SJAG_00564","SJAG_01597","SJAG_02077","SJAG_01442","SJAG_05259","SJAG_01684","SJAG_04996","SJAG_01004","SJAG_04072","SJAG_00196","SJAG_02398","SJAG_00373","SJAG_03358","SJAG_01647","SJAG_00404","SJAG_01917","SJAG_04218","SJAG_02797","SJAG_01615","SJAG_03502","SJAG_04336","SJAG_00687","SJAG_05302","SJAG_03515","SJAG_05300","SJAG_02355","SJAG_01560","SJAG_02016","SJAG_02034","SJAG_01949","SJAG_03416","SJAG_01780","SJAG_04641","SJAG_03560","SJAG_02524","SJAG_04533","SJAG_01120","SJAG_03648","SJAG_03415","SJAG_02809","SJAG_07010","SJAG_04432","SJAG_02917","SJAG_01640","SJAG_01405","SJAG_03633","SJAG_01951","SJAG_02397","SJAG_04014","SJAG_01879","SJAG_04208","SJAG_02361"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99025,96930,100384],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[79491,78866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045041"},{"annotations":[101324,91384,104613,96393,109464,109518,101140,117230,108120,105203,90164,119260,118788,111849,92743,98777,109542,113780,101440,102225,107128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030150"},{"annotations":[58405,90492,79574,75210,109543,75756,77494,109519,104845,115186,118270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[58530,76257,80351,80085,80412],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0032979"},{"annotations":[78394,100125,100476,112372,109520,113774,112019,59047,71704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"},{"annotations":[71596,82165,104123,79987,81780,78622],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[104378,68633,100286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the mitochondrion.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01004":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02016":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03633":null,"SJAG_03648":null,"SJAG_04014":null,"SJAG_04072":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to mitochondrion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"protein localisation in mitochondrion","type":"exact"},{"name":"protein localization in mitochondrion","type":"exact"}],"termid":"GO:0070585","terms_by_termid":{"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0032979":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0160203":null}}


id: PBO:0040241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 2A","termid":"PBO:0040241"}


id: GO:0008488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-glutamate + reduced vitamin K + CO2 + O2 = peptidyl-gamma-carboxyglutamate + vitamin K epoxide.","definition_xrefs":["PMID:18374194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"gamma-glutamyl carboxylase activity","secondary_identifiers":["Reactome:R-HSA-159826","Reactome:R-HSA-159819","Reactome:R-HSA-163810","Reactome:R-HSA-9673231","EC:4.1.1.90","Reactome:R-HSA-159795","Reactome:R-HSA-159803","Reactome:R-HSA-163820","RHEA:45140","Reactome:R-HSA-159761","Reactome:R-HSA-159752","Reactome:R-HSA-6807214"],"termid":"GO:0008488"}


id: MOD:01311
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a lysine N6-hydrogen with a quaternary amine reagent heavy (+3amu) form group.","definition_xrefs":["PubMed:11914093","PubMed:11857757","Unimod:61#K","PubMed:11698400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+3amu) N6-L-lysine","synonyms":[{"name":"GIST-Quat:2H(3)","type":"related"},{"name":"Quaternary amine labeling reagent heavy (+3amu) form, N-term & K","type":"related"}],"termid":"MOD:01311"}


id: PBO:0070713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 18","termid":"PBO:0070713"}


id: GO:0070702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner of two mucus layers secreted by epithelial cells in the colon; the inner mucus layer is firmly attached to the epithelium, is densely packed with a compact stratified appearance and is devoid of bacteria.","definition_xrefs":["GOC:mah","PMID:19432394","GOC:mm2","PMID:18806221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucus layer","termid":"GO:0070701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"inner mucus layer","termid":"GO:0070702"}


id: PBO:0076116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 19","termid":"PBO:0076116"}


id: GO:0023067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the lymphatic system.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via lymphatic system (obsolete GO:0023067)","synonyms":[{"name":"signal transmission via lymphatic system","type":"exact"}],"termid":"GO:0023067"}


id: PBO:0012565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase Aca1","termid":"PBO:0012565"}


id: MONDO:0010461
data:
  {"annotated_genes":["SJAG_00293"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88726],"is_not":false,"summary":null,"term":"MONDO:0010461"}]},"cv_name":"mondo","definition":"X-linked intellectual disability, Nascimento type is a rare X-linked intellectual disability syndrome characterized by intellectual disability (with severe speech impairment), a myxedematous appearance, dysmorphic facial features (including large head, synophrys, prominent supraorbital ridges, almond-shaped and deep-set eyes, large ears, wide mouth with everted lower lip and downturned lip corners), low posterior hairline, short, broad neck, marked general hirsutism and abnormal hair whorls, skin changes (e.g. dry skin or hypopigmented spots), widely spaced nipples, obesity, micropenis, onychodystrophy and seizures.","definition_xrefs":["Orphanet:163956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00293":null},"genotype_count":0,"is_obsolete":false,"name":"syndromic X-linked intellectual disability Nascimento type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:300860","MEDGEN:477095","GARD:17005","DOID:0060820","UMLS:C3275464"],"synonyms":[{"name":"MRXSN","type":"related"},{"name":"X-linked intellectual disability, Nascimento type","type":"related"},{"name":"X-linked intellectual disability-nail dystrophy-seizures syndrome","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic, Nascimento type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked syndromic, Nascimento-type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 30","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Nascimento type","type":"related"},{"name":"mental retardation, X-linked syndromic, Nascimento-type","type":"exact"},{"name":"mental retardation, X-linked, syndromic 30","type":"related"},{"name":"mental retardation, X-linked, syndromic, Nascimento type","type":"related"},{"name":"syndromic X-linked intellectual disability Nascimento type","type":"exact"}],"termid":"MONDO:0010461","terms_by_termid":{"MONDO:0010461":null},"xrefs":{"Monarch":{"xref_id":"0010461"}}}


id: MONDO:0030929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"},{"relation_name":"is_a","term_name":"autosomal dominant primary microcephaly","termid":"MONDO:0007988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 27, primary, autosomal dominant","secondary_identifiers":["UMLS:C5543051","GARD:16433","MEDGEN:1783457","OMIM:619180"],"synonyms":[{"name":"MCPH27","type":"exact"},{"name":"microcephaly 27, primary, autosomal dominant","type":"exact"}],"termid":"MONDO:0030929","xrefs":{"Monarch":{"xref_id":"0030929"}}}


id: PBO:0048626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIPC PDZ domain containing family member 2","termid":"PBO:0048626"}


id: GO:0071407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic compound stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to organic cyclic compound (obsolete GO:0071407)","synonyms":[{"name":"cellular response to organic cyclic substance","type":"exact"}],"termid":"GO:0071407"}


id: PBO:0030683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pear-shaped_vegetative_cell","termid":"PBO:0030683"}


id: PBO:0069454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 719, pseudogene","termid":"PBO:0069454"}


id: SO:0000304
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The recognition site is either palindromic, partially palindromic or an interrupted palindrome. Cleavage occurs within the recognition site.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000304 type_II_enzyme_restriction_site (obsolete SO:0000304)","termid":"SO:0000304"}


id: FYPO:0003410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a larger portion of the centromeric region of the chromosome than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PomBase:vw","PomBase:mah","GO:0034080","PMID:24710126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased spatial extent of CENP-A containing chromatin assembly","synonyms":[{"name":"CENP-A containing nucleosome spreading","type":"related"},{"name":"increased extent of CENP-A containing nucleosome","type":"related"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly","type":"related"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"increased spatial extent of CENP-A deposition","type":"related"},{"name":"increased spatial extent of CENP-A loading","type":"related"},{"name":"increased spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"increased spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"increased spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"increased spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"increased spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0003410"}


id: PBO:0082723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RAM signaling network; is involved in regulation of Ace2p activity and cellular morphogenesis, interacts with protein kinase Cbk1p and also with Kic1p","termid":"PBO:0082723"}


id: PBO:0061459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nebulin related anchoring protein","termid":"PBO:0061459"}


id: PBO:0054287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1678","termid":"PBO:0054287"}


id: FYPO:0004934
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during G1 phase of the mitotic cell cycle is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA level during mitotic G1 phase","synonyms":[{"name":"increased RNA accumulation during mitotic G1 phase","type":"related"},{"name":"increased RNA level during G1 phase of mitotic cell cycle","type":"exact"},{"name":"increased RNA level during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"increased mRNA level during mitotic G1 phase","type":"narrow"},{"name":"increased transcript level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004934"}


id: PBO:0051404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 4, pseudogene","termid":"PBO:0051404"}


id: PBO:0091241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, possible alternative UTR","termid":"PBO:0091241"}


id: PBO:0038968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoethanethiol dioxygenase","termid":"PBO:0038968"}


id: PBO:0081793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 723","termid":"PBO:0081793"}


id: GO:0140538
data:
  {"annotated_genes":["SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97040],"is_not":false,"summary":null,"term":"GO:0140538"}]},"cv_name":"biological_process","definition":"A process that prevents a zygote from fusing an additional cell.","definition_xrefs":["PMID:30089908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of conjugation with cellular fusion","termid":"GO:0031138"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"negatively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"negative regulation of conjugation with zygote","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140538","terms_by_termid":{"GO:0140538":null}}


id: PATO:0001061
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001061 relative elasticity (obsolete PATO:0001061)","termid":"PATO:0001061"}


id: MONDO:0006142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small cell carcinoma arising from the cervix.","definition_xrefs":["NCIT:C7982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"cervical carcinoma","termid":"MONDO:0005131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical small cell carcinoma","secondary_identifiers":["EFO:1000171","UMLS:C0279674","DOID:6740","MEDGEN:79025","ONCOTREE:SCCE"],"synonyms":[{"name":"Cervical small cell cancer","type":"exact"},{"name":"SCCE","type":"related"},{"name":"cervical small cell carcinoma","type":"exact"},{"name":"cervix small cell carcinoma","type":"exact"},{"name":"cervix uteri small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of cervix","type":"exact"},{"name":"small cell carcinoma of cervix uteri","type":"exact"},{"name":"small cell carcinoma of the cervix","type":"exact"},{"name":"small cell carcinoma of the cervix uteri","type":"exact"},{"name":"small cell carcinoma of the uterine cervix","type":"exact"},{"name":"small cell carcinoma of uterine cervix","type":"exact"},{"name":"uterine cervix small cell carcinoma","type":"exact"}],"termid":"MONDO:0006142","xrefs":{"Monarch":{"xref_id":"0006142"}}}


id: PBO:0061579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTM intronic transcript","termid":"PBO:0061579"}


id: GO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal.","definition_xrefs":["EC:1.2.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"retinal dehydrogenase activity","secondary_identifiers":["RHEA:16177","Reactome:R-HSA-5696101","MetaCyc:RETINAL-DEHYDROGENASE-RXN","Reactome:R-HSA-5362522"],"synonyms":[{"name":"cytosolic retinal dehydrogenase activity","type":"related"},{"name":"retinal:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0001758"}


id: GO:0141178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont avoids the effects of recognition by host  complement by altering molecules on the symbiont surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22825444","PMID:25537831","PMID:34887398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of recognition by host complement","synonyms":[{"name":"symbiont-mediated evasion of host complement","type":"exact"}],"termid":"GO:0141178"}


id: GO:0047326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["RHEA:12717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"inositol-1,3,4,6-tetrakisphosphate 5-kinase activity","secondary_identifiers":["KEGG_REACTION:R03478","Reactome:R-HSA-1855228","MetaCyc:2.7.1.140-RXN"],"synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 5-kinase activity","type":"broad"},{"name":"ATP:1D-myo-inositol-1,3,4,6-tetrakisphosphate 5-phosphotransferase activity","type":"related"},{"name":"inositol 1,3,4,6-tetrakisphosphate 5-kinase activity","type":"exact"},{"name":"inositol tetrakisphosphate 5-kinase activity","type":"broad"},{"name":"inositol-tetrakisphosphate 5-kinase activity","type":"broad"}],"termid":"GO:0047326"}


id: PBO:0048384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating Rap/RanGAP domain like 3","termid":"PBO:0048384"}


id: GO:0043887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: melibiose(out) + Na+(out) = melibiose(in) + Na+(in).","definition_xrefs":["PMID:1970646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"melibiose:monoatomic cation symporter activity","termid":"GO:0015487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"melibiose:sodium symporter activity","synonyms":[{"name":"MelB","type":"related"},{"name":"Na+ (Li+)/melibiose symporter activity","type":"exact"},{"name":"Na+-melibiose symporter activity","type":"exact"},{"name":"Na+/melibiose symporter activity","type":"exact"},{"name":"Na+:melibiose symporter activity","type":"exact"},{"name":"melibiose carrier protein","type":"related"},{"name":"melibiose permease","type":"broad"},{"name":"melibiose-Na+ symporter activity","type":"exact"},{"name":"melibiose-sodium symporter activity","type":"exact"},{"name":"melibiose/Na+ symporter activity","type":"exact"},{"name":"melibiose/sodium symporter activity","type":"exact"},{"name":"melibiose:Na+ symporter activity","type":"exact"},{"name":"sodium-melibiose symporter activity","type":"exact"},{"name":"sodium/melibiose symporter activity","type":"exact"},{"name":"sodium:melibiose symporter activity","type":"exact"},{"name":"thiomethylgalactoside permease II","type":"related"}],"termid":"GO:0043887"}


id: PBO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taz1 interacting factor 1, autophagy protein","termid":"PBO:0001649"}


id: PATO:0001476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased position","synonyms":[{"name":"low position","type":"related"}],"termid":"PATO:0001476"}


id: GO:0016408
data:
  {"annotated_genes":["SJAG_00413","SJAG_04107","SJAG_02305","SJAG_04178","SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"},{"annotations":[60288,58726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004321"},{"annotations":[78643,80723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_02305":null,"SJAG_04107":null,"SJAG_04178":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"C-acyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"termid":"GO:0016408","terms_by_termid":{"GO:0003985":null,"GO:0004321":null,"GO:0004758":null}}


id: FYPO:0003741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which cytochrome-c oxidase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal cytochrome-c oxidase activity","termid":"FYPO:0001937"},{"relation_name":"is_a","term_name":"abolished transporter activity","termid":"FYPO:0002117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0002114"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000138","FYPO:0002114","FYPO:0001985"],"is_obsolete":false,"name":"abolished cytochrome-c oxidase activity","synonyms":[{"name":"cytochrome-c oxidase activity abolished","type":"exact"}],"termid":"FYPO:0003741"}


id: PBO:0040824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 2 pseudogene 2","termid":"PBO:0040824"}


id: PBO:0086659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; homozygous diploid deletion strain exhibits low budding index; physically interacts with Hsp82p; YPL257W is not an essential gene","termid":"PBO:0086659"}


id: PBO:0068772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 9","termid":"PBO:0068772"}


id: PBO:0015696
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SSK1","termid":"PBO:0015696"}


id: PBO:0076472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TANK antisense RNA 1","termid":"PBO:0076472"}


id: MONDO:0010193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Weaver syndrome (WVS) is a rare, multisystem disorder characterized by tall stature, a typical facial appearance (hypertelorism, retrognathia) and variable intellectual disability. Additional features may include camptodactyly, soft doughy skin, umbilical hernia, and a low hoarse cry.","definition_xrefs":["Orphanet:3447"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weaver syndrome","secondary_identifiers":["NANDO:2200957","UMLS:C0265210","NORD:1839","DOID:14731","GTR:AN0102079","OMIM:277590","MESH:C536687","icd11.foundation:2042913723","NANDO:1200659","MEDGEN:120511","GARD:7878","SCTID:63119004","GTR:AN0102080","NCIT:C125599","ICD9:759.89"],"synonyms":[{"name":"EZH2 related overgrowth","type":"related"},{"name":"WEAVER syndrome","type":"related"},{"name":"WEAVER-like syndrome","type":"exact"},{"name":"WVS","type":"related"},{"name":"Weaver Smith syndrome","type":"related"},{"name":"Weaver Williams syndrome","type":"related"},{"name":"Weaver like syndrome","type":"related"},{"name":"Weaver syndrome","type":"exact"},{"name":"Weaver-Smith syndrome","type":"related"},{"name":"Weaver-like syndrome","type":"related"},{"name":"camptodactyly - overgrowth - unusual facies","type":"related"},{"name":"camptodactyly-overgrowth-unusual facies syndrome","type":"exact"},{"name":"intellectual disability, microcephaly, weight deficiency, unusual facies, clinodactyly, bone hypoplasia, and cleft palate","type":"related"},{"name":"mental retardation, microcephaly, weight deficiency, unusual facies, clinodactyly, bone hypoplasia, and cleft palate","type":"related"},{"name":"overgrowth syndrome with accelerated skeletal maturation, unusual facies, and camptodactyly","type":"related"}],"termid":"MONDO:0010193","xrefs":{"Monarch":{"xref_id":"0010193"}}}


id: PBO:0081014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB46 antisense RNA 2","termid":"PBO:0081014"}


id: GO:1901469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of syringal lignin catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"syringal lignin catabolic process","termid":"GO:1901065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of syringal lignin catabolic process","synonyms":[{"name":"regulation of S-lignin catabolic process","type":"exact"},{"name":"regulation of syringal lignin breakdown","type":"exact"},{"name":"regulation of syringal lignin catabolism","type":"exact"},{"name":"regulation of syringal lignin degradation","type":"exact"}],"termid":"GO:1901469"}


id: GO:0005158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an insulin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"insulin receptor binding","synonyms":[{"name":"insulin receptor ligand","type":"narrow"}],"termid":"GO:0005158"}


id: PATO:0001917
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front and abdomen of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior to","termid":"PATO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteroventral to","termid":"PATO:0001917"}


id: PBO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase subunit Bgs2","termid":"PBO:0001858"}


id: GO:1900220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that contributes to bone trabecula morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway","termid":"GO:0071526"},{"relation_name":"part_of","term_name":"bone trabecula morphogenesis","termid":"GO:0061430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in bone trabecula morphogenesis","synonyms":[{"name":"semaphorin-plexin signaling pathway of bone trabecula morphogenesis","type":"exact"},{"name":"semaphorin-plexin signalling pathway of bone trabecula morphogenesis","type":"exact"}],"termid":"GO:1900220"}


id: GO:0016797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end to yield 3' phosphomonoesters.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters (obsolete GO:0016797)","termid":"GO:0016797"}


id: PBO:0075395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp8 transcription factor","termid":"PBO:0075395"}


id: PBO:0049908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexosaminidase subunit alpha","termid":"PBO:0049908"}


id: PBO:0086298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in the ubiquitin-proteasome pathway; interacts with ubiquitinated protein, Cdc48p and the proteasomal regulatory particle; may protect cells from trivalent metalloid induced proteotoxicity; contains a PACE promoter element and is co-regulated with proteasome subunit genes; AN1-type zinc finger protein, with DHHC and ubiquitin-like domains (UBL); ortholog of ZFAND1, a human gene linked to cancer; protein abundance increases under DNA replication stress","termid":"PBO:0086298"}


id: PBO:0065400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 3 pseudogene 1","termid":"PBO:0065400"}


id: MONDO:0014979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, intractable, neonatal","secondary_identifiers":["MEDGEN:934625","UMLS:C4310658","OMIM:617235"],"synonyms":[{"name":"NEIMY","type":"exact"},{"name":"myoclonus, intractable, neonatal","type":"exact"},{"name":"myoclonus, intractable, neonatal; NEIMY","type":"exact"}],"termid":"MONDO:0014979","xrefs":{"Monarch":{"xref_id":"0014979"}}}


id: PBO:0012060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-specific flocculin Gsf2","termid":"PBO:0012060"}


id: GO:0032558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adenyl deoxyribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide binding","termid":"GO:0032554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"}


id: MONDO:0800180
data:
  {"annotated_genes":["SJAG_04944"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030048"},{"annotations":[87703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"}]},"cv_name":"mondo","definition":"Any inherited porphyria in which the cause of the disease is monoallelic or biallelic variants in the CPOX gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0019142"],"is_obsolete":false,"name":"CPOX-related hereditary coproporphyria","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800180","terms_by_termid":{"MONDO:0007369":null,"MONDO:0030048":null},"xrefs":{"Monarch":{"xref_id":"0800180"}}}


id: FYPO:0003956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A translation phenotype in which a tRNA pairs with mRNA at the stop codon UAA, and incorporates an amino acid residue into the nascent polypeptide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"UAA suppression","synonyms":[{"name":"UAA suppressor","type":"exact"},{"name":"ochre suppression","type":"exact"},{"name":"ochre suppressor","type":"exact"}],"termid":"FYPO:0003956"}


id: GO:0008123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + O2 + reduced [NADPH--hemoprotein reductase] = 7alpha-hydroxycholesterol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:21812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 7-alpha-hydroxylase activity","termid":"GO:0008387"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cholesterol 7-alpha-monooxygenase activity","secondary_identifiers":["Reactome:R-HSA-192051","MetaCyc:CHOLESTEROL-7-ALPHA-MONOOXYGENASE-RXN","EC:1.14.14.23"],"synonyms":[{"name":"cholesterol 7-alpha-hydroxylase activity","type":"exact"},{"name":"cholesterol 7alpha-hydroxylase activity","type":"related"},{"name":"cholesterol 7alpha-monooxygenase activity","type":"related"},{"name":"cholesterol,NADPH:oxygen oxidoreductase (7alpha-hydroxylating)","type":"related"},{"name":"cytochrome P450 CYP7A1","type":"narrow"}],"termid":"GO:0008123"}


id: MONDO:0003537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of lymphoblasts committed to the T-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called T acute lymphoblastic leukemia. When it involves nodal or extranodal sites it is called T lymphoblastic lymphoma. (WHO, 2001)","definition_xrefs":["NCIT:C8694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"precursor lymphoblastic lymphoma/leukemia","termid":"MONDO:0003538"},{"relation_name":"is_a","term_name":"T-cell and NK-cell neoplasm","termid":"MONDO:0024615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"precursor T-lymphoblastic lymphoma/leukemia","secondary_identifiers":["ICDO:9837/3","UMLS:C1301359","MEDGEN:224897","DOID:5599"],"synonyms":[{"name":"T lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T lymphoblastic lymphoma/leukemia","type":"exact"},{"name":"precursor T-lymphoblastic lymphoma/leukemia","type":"exact"}],"termid":"MONDO:0003537","xrefs":{"Monarch":{"xref_id":"0003537"}}}


id: GO:0043033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram-negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages.","definition_xrefs":["GOC:jl","PMID:10333591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"isoamylase complex","synonyms":[{"name":"debranching enzyme complex","type":"broad"}],"termid":"GO:0043033"}


id: MONDO:0004729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders affecting the motor function of the upper esophageal sphincter; lower esophageal sphincter; the esophagus body, or a combination of these parts. The failure of the sphincters to maintain a tonic pressure may result in gastric reflux of food and acid into the esophagus (gastroesophageal reflux). Other disorders include hypermotility (spastic disorders) and markedly increased amplitude in contraction (nutcracker esophagus).","definition_xrefs":["MESH:D015154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"dyskinesia of esophagus","secondary_identifiers":["DOID:9192","ICD10CM:K22.4","ICD9:530.5","MEDGEN:41868","SCTID:266434009","UMLS:C0014858"],"synonyms":[{"name":"dyskinesia of esophagus","type":"exact"},{"name":"esophageal dysmotility","type":"exact"},{"name":"esophageal motility disorder","type":"exact"},{"name":"oesophageal dysmotility","type":"exact"},{"name":"oesophageal motor disorder","type":"exact"}],"termid":"MONDO:0004729","xrefs":{"Monarch":{"xref_id":"0004729"}}}


id: MONDO:0014748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"progressive spondyloepimetaphyseal dysplasia-short stature-short fourth metatarsals-intellectual disability syndrome","secondary_identifiers":["Orphanet:457395","UMLS:C5568882","OMIM:616723","GARD:17808","MEDGEN:1800305"],"synonyms":[{"name":"SEMDFA","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, faden-ALKURAYA type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, faden-Alkuraya type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, progressive, with short stature, Facial Dysmorphism, short fourth metatarsals, and intellectual disability, with or without craniosynostosis","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, progressive, with short stature, Facial Dysmorphism, short fourth metatarsals, and mental retardation, with or without craniosynostosis","type":"related"}],"termid":"MONDO:0014748","xrefs":{"Monarch":{"xref_id":"0014748"}}}


id: GO:0039022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric duct over time, from its formation to the mature structure. The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the pronephric kidney.","definition_xrefs":["ZFA:0000150","XAO:0000063","GOC:mtg_kidney_jan10","PMID:15647339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephric duct development","termid":"GO:0072176"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric duct development","termid":"GO:0039022"}


id: GO:0016343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The direct or indirect linkage of cytoskeletal filaments to the plasma membrane.","definition_xrefs":["ISBN:0198599323"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal anchoring activity (obsolete GO:0016343)","synonyms":[{"name":"cytoskeletal anchoring activity","type":"exact"}],"termid":"GO:0016343"}


id: GO:0098779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitophagy in response to mitochondrial depolarization.","definition_xrefs":["GOC:PARL","PMID:23985961","PMID:18200046"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitophagy in response to mitochondrial depolarization (obsolete GO:0098779)","termid":"GO:0098779"}


id: MONDO:0016235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete complex vascular malformation with associated anomalies (obsolete MONDO:0016235)","secondary_identifiers":["Orphanet:211277"],"synonyms":[{"name":"hemangiolymphangioma","type":"exact"}],"termid":"MONDO:0016235","xrefs":{"Monarch":{"xref_id":"0016235"}}}


id: GO:0141110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a transporter.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"},{"relation_name":"is_a","term_name":"transporter regulator activity","termid":"GO:0141108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"transporter inhibitor activity","termid":"GO:0141110"}


id: FYPO:0005490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to vacuole","synonyms":[{"name":"abnormal protein localisation to vacuole","type":"exact"},{"name":"abnormal protein localization in vacuole","type":"exact"},{"name":"abnormal protein localization to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0005490"}


id: MONDO:0037748
data:
  {"annotated_genes":["SJAG_02432","SJAG_04785","SJAG_01072"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88340,88338,88339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011369"}]},"cv_name":"mondo","definition":"An elevated concentration of lipoproteins.","definition_xrefs":["NCIT:C34709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01072":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperlipoproteinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0010980","MESH:D006951","MEDGEN:9363","UMLS:C0020476"],"synonyms":[{"name":"hyperlipoproteinemia","type":"exact"}],"termid":"MONDO:0037748","terms_by_termid":{"MONDO:0011369":null},"xrefs":{"Monarch":{"xref_id":"0037748"}}}


id: MONDO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenocortical carcinoma (obsolete MONDO:0005241)","synonyms":[{"name":"obsolete adrenocortical carcinoma (disease)","type":"exact"}],"termid":"MONDO:0005241","xrefs":{"Monarch":{"xref_id":"0005241"}}}


id: PR:O59790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aurora kinase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ark1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.13c","secondary_identifiers":["UniProtKB:O59790"],"synonyms":[{"name":"SPCC320.13c","type":"related"},{"name":"Spom972h-AURKB","type":"exact"},{"name":"aurora-related kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sex1","type":"related"}],"termid":"PR:O59790"}


id: GO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any complex that mediates dynamic changes in eukaryotic chromatin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin remodeling complex (obsolete GO:0016585)","synonyms":[{"name":"chromatin remodeling complex","type":"exact"},{"name":"chromatin remodelling complex","type":"exact"},{"name":"nucleosome remodeling complex","type":"exact"}],"termid":"GO:0016585"}


id: PBO:0042993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 6","termid":"PBO:0042993"}


id: PBO:0080404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS35 endosomal protein sorting factor like","termid":"PBO:0080404"}


id: GO:0075160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075160)","synonyms":[{"name":"positive regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075160"}


id: PBO:0034751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin loading/unloading factor (WAPL) Wpl1","termid":"PBO:0034751"}


id: GO:0140608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a cysteine-type endopeptidase.","definition_xrefs":["PMID:32558991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activator activity","termid":"GO:0061133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"cysteine-type endopeptidase activator activity","synonyms":[{"name":"caspase activator activator activity","type":"narrow"}],"termid":"GO:0140608"}


id: GO:0106114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic cohesin dsDNA (leading strand) loading.","definition_xrefs":["PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic cohesin dsDNA (leading strand) loading (obsolete GO:0106114)","termid":"GO:0106114"}


id: MONDO:0858940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant astrocytoma that is characterized by receptor tyrosine kinase fusions in the NTRK family, ROS1, ALK, or MET genes, that arises in the cerebral hemisphere and occurs in early childhood.","definition_xrefs":["DOID:0081278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infant-type hemispheric glioma","secondary_identifiers":["MEDGEN:1806401","UMLS:C5669919","NCIT:C185471"],"termid":"MONDO:0858940","xrefs":{"Monarch":{"xref_id":"0858940"}}}


id: PBO:0043947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta A2","termid":"PBO:0043947"}


id: MONDO:0700051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess that involves the liver.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"liver abscess (disease)","secondary_identifiers":["NCIT:C99089","SCTID:27916005"],"synonyms":[{"name":"abscess of liver","type":"exact"},{"name":"hepatic abscess","type":"exact"}],"termid":"MONDO:0700051","xrefs":{"Monarch":{"xref_id":"0700051"}}}


id: MONDO:1012038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar abiotrophy, non-human animal","termid":"MONDO:1011834"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar abiotrophy, dog","secondary_identifiers":["OMIA:000175-9615"],"termid":"MONDO:1012038","xrefs":{"Monarch":{"xref_id":"1012038"}}}


id: PBO:0056124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LysM domain containing 1","termid":"PBO:0056124"}


id: MONDO:1012604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in pigs in which there is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000403-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, pig","termid":"MONDO:1010842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, pig","synonyms":[{"name":"gangliosidosis, GM2, generic, pig","type":"related"}],"termid":"MONDO:1012604","xrefs":{"Monarch":{"xref_id":"1012604"}}}


id: PBO:0046344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 2","termid":"PBO:0046344"}


id: PR:Q09865
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.08","secondary_identifiers":["UniProtKB:Q09865"],"synonyms":[{"name":"Spom972h-rplF","type":"exact"}],"termid":"PR:Q09865"}


id: MONDO:0012902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 4q12-q13.1.","definition_xrefs":["DOID:0110556","PMID:18279434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 27","secondary_identifiers":["MEDGEN:854637","GARD:18128","OMIM:612431","UMLS:C3887929"],"synonyms":[{"name":"DFNA27","type":"narrow"},{"name":"autosomal dominant deafness 27","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 27","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 27","type":"narrow"},{"name":"deafness, autosomal dominant 27","type":"narrow"}],"termid":"MONDO:0012902","xrefs":{"Monarch":{"xref_id":"0012902"}}}


id: MONDO:0003225
data:
  {"annotated_genes":["SJAG_02339","SJAG_00328","SJAG_01410","SJAG_02708","SJAG_02763","SJAG_03453","SJAG_03905","SJAG_01840","SJAG_01748","SJAG_05979","SJAG_01349","SJAG_01013","SJAG_05180","SJAG_02556","SJAG_01457","SJAG_04991","SJAG_00611","SJAG_02690","SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89039,89041,89040,89193,89194,89038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[87416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030894"},{"annotations":[88141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013851"},{"annotations":[87957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014887"},{"annotations":[88152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013248"},{"annotations":[88576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013499"},{"annotations":[86860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014108"},{"annotations":[88831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014986"},{"annotations":[88835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014987"},{"annotations":[88832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014985"},{"annotations":[87726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"},{"annotations":[88248,88249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[88053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957595"}]},"cv_name":"mondo","definition":"Any disease of the bone marrow.","definition_xrefs":["NCIT:C34433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_00611":null,"SJAG_01013":null,"SJAG_01349":null,"SJAG_01410":null,"SJAG_01457":null,"SJAG_01748":null,"SJAG_01840":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02556":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_02763":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_04991":null,"SJAG_05180":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"bone marrow disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4021634","ICD9:289.9","MEDGEN:892905","MESH:D001855","SCTID:127035006","DOID:4961"],"synonyms":[{"name":"bone marrow disease","type":"exact"},{"name":"bone marrow disease or disorder","type":"exact"},{"name":"bone marrow disorder","type":"exact"},{"name":"disease of bone marrow","type":"exact"},{"name":"disease or disorder of bone marrow","type":"exact"},{"name":"disorder of bone marrow","type":"exact"}],"termid":"MONDO:0003225","terms_by_termid":{"MONDO:0012316":null,"MONDO:0013248":null,"MONDO:0013499":null,"MONDO:0013851":null,"MONDO:0014108":null,"MONDO:0014887":null,"MONDO:0014985":null,"MONDO:0014986":null,"MONDO:0014987":null,"MONDO:0018874":null,"MONDO:0030894":null,"MONDO:0054862":null,"MONDO:0957595":null},"xrefs":{"Monarch":{"xref_id":"0003225"}}}


id: PBO:0082346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase; component of the mitochondrial degradosome along with the RNase Dss1p; the degradosome associates with the ribosome and mediates RNA turnover; also required during splicing of the COX1 AI5_beta intron; expression of a processed form of human homolog SUPV3L1 carrying an N-terminal deletion of 46 amino acids rescues yeast suv3 null mutant","termid":"PBO:0082346"}


id: PBO:0076205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 15","termid":"PBO:0076205"}


id: MONDO:1010983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in yellow-crowned parrot.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, yellow-crowned parrot","secondary_identifiers":["OMIA:000487-151761"],"termid":"MONDO:1010983","xrefs":{"Monarch":{"xref_id":"1010983"}}}


id: PBO:0057552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 665","termid":"PBO:0057552"}


id: MONDO:0021577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinal neural neoplasm","termid":"MONDO:0003098"},{"relation_name":"is_a","term_name":"mediastinal cancer","termid":"MONDO:0005843"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mediastinal neural neoplasm","secondary_identifiers":["UMLS:C0349665","MEDGEN:578863","SCTID:278044006"],"synonyms":[{"name":"malignant neuroma of mediastinum","type":"exact"}],"termid":"MONDO:0021577","xrefs":{"Monarch":{"xref_id":"0021577"}}}


id: MONDO:0800455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Birt-Hogg-Dube syndrome caused by the mutations in PRDM10.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Birt-Hogg-Dube syndrome","termid":"MONDO:0800444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Birt-Hogg-Dube syndrome 2","secondary_identifiers":["MEDGEN:1841312","UMLS:C5830676","OMIM:620459"],"synonyms":[{"name":"BHD2","type":"exact"}],"termid":"MONDO:0800455","xrefs":{"Monarch":{"xref_id":"0800455"}}}


id: PBO:0028707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_double-strand_break_sites_during_meiotic_cell_cycle","termid":"PBO:0028707"}


id: PBO:0003629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis15","termid":"PBO:0003629"}


id: MONDO:0012063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulnar/fibula ray defect - brachydactyly syndrome is a very rare malformation syndrome characterized by ulnar hypoplasia associated with hypoplastic to absent fourth and/or fifth digits, fibular hypoplasia, short stature and facial dysmorphism.","definition_xrefs":["Orphanet:52056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulnar/fibula ray defect-brachydactyly syndrome","secondary_identifiers":["GARD:16654","MEDGEN:324890","MESH:C563905","OMIM:608571","UMLS:C1837830","SCTID:719843001"],"synonyms":[{"name":"Morava-Mehes syndrome","type":"exact"},{"name":"ulnar/fibular RAY defect and brachydactyly","type":"related"}],"termid":"MONDO:0012063","xrefs":{"Monarch":{"xref_id":"0012063"}}}


id: PBO:0042237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle progression 1","termid":"PBO:0042237"}


id: GO:0034657
data:
  {"annotated_genes":["SJAG_01637","SJAG_01886","SJAG_01678","SJAG_04309","SJAG_02197","SJAG_01472","SJAG_03385"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72747,79164,80842,81805,82195,90125,116250],"is_not":false,"summary":null,"term":"GO:0034657"}]},"cv_name":"cellular_component","definition":"A protein complex with ubiquitin ligase activity that, in Saccharomyces cerevisiae, is involved in proteasomal degradation of fructose-1,6-bisphosphatase (FBPase) and phosphoenolpyruvate carboxykinase during the transition from gluconeogenic to glycolytic growth conditions. It appears to play a broader role in cellular homeostasis and development in other species.","definition_xrefs":["PMID:12686616","PMID:18508925","PMID:35682545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01472":null,"SJAG_01637":null,"SJAG_01678":null,"SJAG_01886":null,"SJAG_02197":null,"SJAG_03385":null,"SJAG_04309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GID complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal to LisH complex","type":"exact"},{"name":"CTLH complex","type":"exact"}],"termid":"GO:0034657","terms_by_termid":{"GO:0034657":null}}


id: SO:0000663
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a transfer RNA (tRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_encoding","synonyms":[{"name":"tRNA encoding","type":"exact"}],"termid":"SO:0000663"}


id: MONDO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the breast parenchyma and is characterized by the presence of large malignant cells that exhibit keratinization.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratinizing squamous cell carcinoma","termid":"MONDO:0005056"},{"relation_name":"is_a","term_name":"squamous cell breast carcinoma","termid":"MONDO:0006056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"large cell keratinizing variant squamous cell breast carcinoma","secondary_identifiers":["NCIT:C40357","UMLS:C1519486","DOID:7461","MEDGEN:274269"],"synonyms":[{"name":"squamous cell breast carcinoma, large cell keratinizing variant","type":"exact"}],"termid":"MONDO:0004232","xrefs":{"Monarch":{"xref_id":"0004232"}}}


id: GO:0036405
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos","GOC:md"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of cell outer membrane (obsolete GO:0036405)","synonyms":[{"name":"anchored to cell outer membrane","type":"narrow"}],"termid":"GO:0036405"}


id: MONDO:0017380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile gastrointestinal polyposis (JIP) is a rare condition characterized by the presence of juvenile hamartomatous polyps in the gastrointestinal (GI) tract.","definition_xrefs":["Orphanet:2929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"juvenile polyposis syndrome","secondary_identifiers":["MEDGEN:87518","GARD:3065","SCTID:9273005","UMLS:C0345893","NCIT:C7754","NANDO:2200916","OMIM:174900"],"synonyms":[{"name":"JIP","type":"exact"},{"name":"JPS","type":"exact"},{"name":"PJI","type":"related"},{"name":"jPS","type":"exact"},{"name":"juvenile gastrointestinal polyposis","type":"exact"},{"name":"juvenile intestinal polyposis","type":"exact"},{"name":"juvenile multiple polyps syndrome","type":"exact"},{"name":"juvenile polyposis","type":"exact"},{"name":"juvenile polyposis syndrome","type":"exact"},{"name":"polyposis familial of entire gastrointestinal tract","type":"related"},{"name":"polyposis juvenile intestinal","type":"related"},{"name":"polyposis, juvenile intestinal","type":"exact"}],"termid":"MONDO:0017380","xrefs":{"Monarch":{"xref_id":"0017380"}}}


id: PBO:0074117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 3","termid":"PBO:0074117"}


id: GO:0120280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cilary pro-basal body is an immature, partially assembled form of a ciliary basal body found next to the basal body of a cilium. Pro-basal bodies are not capable of nucleating a cilium. As the cell progresses through the cell cycle, continuing assembly will convert the pro-basal body into a mature basal body that is capable of nucleating a cilium.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary pro-basal body","synonyms":[{"name":"flagellar pro-basal body","type":"exact"},{"name":"flagellar probasal body","type":"exact"},{"name":"pro-basal body","type":"broad"},{"name":"pro-centriole","type":"broad"},{"name":"probasal body","type":"broad"}],"termid":"GO:0120280"}


id: PBO:0058076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4294","termid":"PBO:0058076"}


id: PBO:0080656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE2 pseudogene 1","termid":"PBO:0080656"}


id: PBO:0028874
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)_RNA_binding","termid":"PBO:0028874"}


id: PBO:0091129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit Sap18","termid":"PBO:0091129"}


id: PBO:0004689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp10 (predicted)","termid":"PBO:0004689"}


id: PBO:0041352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C4A (Rodgers blood group)","termid":"PBO:0041352"}


id: GO:0046940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing one or more phosphate groups into a nucleoside monophosphate to produce a polyphosphorylated nucleoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"},{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}


id: FYPO:0003838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction does not occur. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["GO:1902404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000032","FYPO:0004803","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished actomyosin contractile ring contraction","synonyms":[{"name":"abolished actomyosin contractile ring constriction","type":"exact"},{"name":"abolished actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"abolished actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"abolished cytokinesis with stable actinomyosin ring","type":"related"},{"name":"abolished cytokinetic contractile ring contraction","type":"exact"},{"name":"abolished mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"abolished mitotic contractile ring contraction","type":"exact"},{"name":"actomyosin contractile ring contraction abolished","type":"exact"}],"termid":"FYPO:0003838"}


id: GO:0009813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavonoids, a group of phenolic derivatives containing a flavan skeleton.","definition_xrefs":["GOC:tair_curators","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonoid biosynthetic process","secondary_identifiers":["MetaCyc:PWY1F-FLAVSYN","Wikipedia:Flavonoid"],"synonyms":[{"name":"flavonoid anabolism","type":"exact"},{"name":"flavonoid biosynthesis","type":"exact"},{"name":"flavonoid formation","type":"exact"},{"name":"flavonoid synthesis","type":"exact"}],"termid":"GO:0009813"}


id: PR:Q04635
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- esc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q04635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein esc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.16","synonyms":[{"name":"Spom972h-esc1","type":"exact"}],"termid":"PR:Q04635"}


id: GO:0035433
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006847"}]},"cv_name":"biological_process","definition":"The process in which acetate is transported across a membrane. Acetate is the 2-carbon carboxylic acid ethanoic acid.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate transport","termid":"GO:0006846"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"acetate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acetate membrane transport","type":"exact"}],"termid":"GO:0035433","terms_by_termid":{"GO:0006847":null}}


id: PR:O94650
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-like protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02376","PRO:DNx","PANTHER:PTHR13042:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like modifier hub1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.03","secondary_identifiers":["UniProtKB:O94650"],"synonyms":[{"name":"Spom972h-UBL5","type":"exact"}],"termid":"PR:O94650"}


id: PBO:0069103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 351, pseudogene","termid":"PBO:0069103"}


id: GO:1901249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lung goblet cell differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"lung goblet cell differentiation","termid":"GO:0060480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung goblet cell differentiation","synonyms":[{"name":"regulation of pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:1901249"}


id: PBO:0058740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6864","termid":"PBO:0058740"}


id: PBO:0078834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (GGG) 1-1","termid":"PBO:0078834"}


id: PBO:0069195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 449, pseudogene","termid":"PBO:0069195"}


id: PBO:0063202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP1 antisense RNA 1","termid":"PBO:0063202"}


id: GO:0038077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation and activation of a MAP kinase kinase (MAPKK), as part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase kinase activity involved in innate immune response (obsolete GO:0038077)","synonyms":[{"name":"MAP3K activity involved in innate immune response","type":"exact"},{"name":"MAPKKK activity involved in innate immune response","type":"exact"}],"termid":"GO:0038077"}


id: PBO:0028767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_glucose_starvation","termid":"PBO:0028767"}


id: PBO:0088541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Tvp23","termid":"PBO:0088541"}


id: MONDO:1012875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease that occurs in crab-eating macaques due to a mutation in the PINK1 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease, non-human animal","termid":"MONDO:1012984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease, PINK1-related, crab-eating macaque","secondary_identifiers":["OMIA:002361-9541"],"termid":"MONDO:1012875","xrefs":{"Monarch":{"xref_id":"1012875"}}}


id: PBO:0075212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin beta 2","termid":"PBO:0075212"}


id: PBO:0087934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational elongation factor EF-1 alpha; GTP-bound active form, binds to and delivers aminoacylated tRNA to the A-site of ribosomes for elongation of nascent polypeptides; moonlighting function as an actin binding and bundling protein; association with GTPase Rho1p on the vacuolar membrane may facilitate F-actin remodeling; involved in tRNA re-export from the nucleus","termid":"PBO:0087934"}


id: PBO:0056330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 11","termid":"PBO:0056330"}


id: PBO:0005075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp9 (predicted)","termid":"PBO:0005075"}


id: PATO:0000698
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000698 floury (obsolete PATO:0000698)","termid":"PATO:0000698"}


id: PBO:0068852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 90, pseudogene","termid":"PBO:0068852"}


id: PBO:0040549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GNT2 pseudogene 1","termid":"PBO:0040549"}


id: PR:O94274
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.26 gene.","definition_xrefs":["UniProtKB:O94274","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.26","synonyms":[{"name":"Spom972h-SPBP8B7.26","type":"exact"}],"termid":"PR:O94274"}


id: FYECO:0000318
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which compactin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ compactin","termid":"FYECO:0000318"}


id: PBO:0027782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_threonine_phosphorylation","termid":"PBO:0027782"}


id: PR:Q09687
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13C5.05c gene.","definition_xrefs":["UniProtKB:Q09687","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoacetylglucosamine mutase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.05c","synonyms":[{"name":"N-acetylglucosamine-phosphate mutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC13C5.05c","type":"exact"},{"name":"acetylglucosamine phosphomutase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09687"}


id: PBO:0109515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VCP nuclear cofactor family member 2","termid":"PBO:0109515"}


id: GO:0080037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cytokinin signaling.","definition_xrefs":["GOC:dhl","PMID:14973166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of cytokinin-activated signaling pathway","termid":"GO:0080036"},{"relation_name":"negatively_regulates","term_name":"cytokinin-activated signaling pathway","termid":"GO:0009736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cytokinin-activated signaling pathway","synonyms":[{"name":"negative regulation of cytokinin mediated signaling pathway","type":"related"},{"name":"negative regulation of cytokinin mediated signalling","type":"exact"}],"termid":"GO:0080037"}


id: PBO:0043071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 5","termid":"PBO:0043071"}


id: MONDO:0800036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTTC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0004069"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTTC","synonyms":[{"name":"MTTC MELAS syndrome","type":"exact"}],"termid":"MONDO:0800036","xrefs":{"Monarch":{"xref_id":"0800036"}}}


id: PBO:0082271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP deaminase; tetrameric enzyme that catalyzes the deamination of AMP to form IMP and ammonia; thought to be involved in regulation of intracellular purine (adenine, guanine, and inosine) nucleotide pools","termid":"PBO:0082271"}


id: SO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The possible discontinous stretch of DNA that encompass all the TFRSs that regulate a promoter.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"has_part","term_name":"transcription_factor_regulatory_site","termid":"SO:0002295"},{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFRS_collection","synonyms":[{"name":"TFRS collection","type":"exact"},{"name":"transcription factor regulatory site collection","type":"exact"}],"termid":"SO:0002297"}


id: PBO:0087104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein lysine methyltransferase; responsible for trimethylation of the lysine residue at position 3 of Rpl12Ap and Rpl12Bp","termid":"PBO:0087104"}


id: GO:0102172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NADH + O2 + H+ = 4alpha-formyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NAD + 2 H2O.","definition_xrefs":["RHEA:58860","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol-4alpha-methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11925"],"termid":"GO:0102172"}


id: MONDO:0002962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial verrucous lesion of the skin. Morphologically, it is characterized by the presence of epidermolytic hyperkeratosis and papillomatosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acanthoma","termid":"MONDO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolytic acanthoma","secondary_identifiers":["UMLS:C1333414","MEDGEN:272577","NCIT:C27516","DOID:4323"],"termid":"MONDO:0002962","xrefs":{"Monarch":{"xref_id":"0002962"}}}


id: PBO:0029063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vacuoles_during_vegetative_growth","termid":"PBO:0029063"}


id: PR:Q50HP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q50HP4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.22c","synonyms":[{"name":"Spom972h-dad4","type":"exact"},{"name":"outer kinetochore protein dad4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q50HP4"}


id: MONDO:1011270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetic cataract that occurs in degu.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetic cataract, non-human animal","termid":"MONDO:1010343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetic cataract, degu","secondary_identifiers":["OMIA:001865-10160"],"termid":"MONDO:1011270","xrefs":{"Monarch":{"xref_id":"1011270"}}}


id: PBO:0034764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex ubiquitin conjugating enzyme E2 Ubc7","termid":"PBO:0034764"}


id: PBO:0089323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5-like heme/steroid binding domain superfamily","termid":"PBO:0089323"}


id: PBO:0082164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenylosuccinate lyase; catalyzes two steps in the 'de novo' purine nucleotide biosynthetic pathway; expression is repressed by adenine and activated by Bas1p and Pho2p; mutations in human ortholog ADSL cause adenylosuccinase deficiency; human ADSL can complement yeast ADE13 null mutant","termid":"PBO:0082164"}


id: GO:0036273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a statin stimulus. Statins are organooxygen compounds whose structure is related to compactin (mevastatin) and which may be used as an anticholesteremic drug due its EC:1.1.1.34/EC:1.1.1.88 (hydroxymethylglutaryl-CoA reductase) inhibitory properties.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to statin","synonyms":[{"name":"response to HMG-CoA reductase inhibitor","type":"related"},{"name":"response to hydroxymethylglutaryl-CoA reductase inhibitor","type":"related"}],"termid":"GO:0036273"}


id: PBO:0052552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLRC4-KLRK1 readthrough","termid":"PBO:0052552"}


id: PBO:0090968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome export GTP binding protein Nog1","termid":"PBO:0090968"}


id: GO:0140299
data:
  {"annotated_genes":["SJAG_02226","SJAG_03828","SJAG_02748","SJAG_02945","SJAG_02267","SJAG_01807","SJAG_00642","SJAG_03903","SJAG_02657","SJAG_02708","SJAG_02853","SJAG_02135","SJAG_02187","SJAG_01419","SJAG_03405","SJAG_02183","SJAG_01410","SJAG_00792","SJAG_00027","SJAG_06622","SJAG_02613","SJAG_01587","SJAG_00331","SJAG_06621","SJAG_00757","SJAG_03715","SJAG_01620"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65084,60701,58080,65766,57028,60316,61971,59153,64164,68984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140664"},{"annotations":[114852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140786"},{"annotations":[95931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140482"},{"annotations":[110933,113698,110939,110938,110934,110935,110936,110937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019826"},{"annotations":[97143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140442"},{"annotations":[119545,121010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140550"},{"annotations":[58139,66832,79671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000155"},{"annotations":[116909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032935"},{"annotations":[105358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106219"}]},"cv_name":"molecular_function","definition":"Binding to a molecule and eliciting a change in the protein's activity in response to the intracellular level of that molecule.","definition_xrefs":["PMID:26328879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function regulator activity","termid":"GO:0098772"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00331":null,"SJAG_00642":null,"SJAG_00757":null,"SJAG_00792":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01587":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02613":null,"SJAG_02657":null,"SJAG_02708":null,"SJAG_02748":null,"SJAG_02853":null,"SJAG_02945":null,"SJAG_03405":null,"SJAG_03715":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"molecular sensor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"small molecular sensor activity","type":"exact"},{"name":"small molecule sensing activity","type":"exact"},{"name":"small molecule sensor activity","type":"narrow"}],"termid":"GO:0140299","terms_by_termid":{"GO:0000155":null,"GO:0019826":null,"GO:0032935":null,"GO:0106219":null,"GO:0140442":null,"GO:0140482":null,"GO:0140550":null,"GO:0140664":null,"GO:0140786":null}}


id: MONDO:0958095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Nodal T-follicular helper cell lymphoma, follicular type","secondary_identifiers":["NCIT:C80375","UMLS:C2700204","Orphanet:652650","MEDGEN:398050"],"termid":"MONDO:0958095","xrefs":{"Monarch":{"xref_id":"0958095"}}}


id: PBO:0080108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP25 small subunit processome component","termid":"PBO:0080108"}


id: PBO:0090169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface protein involved in ascospore wall assembly, GPI anchored Meu10","termid":"PBO:0090169"}


id: PATO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001211 solid_angle_quantity (obsolete PATO:0001211)","termid":"PATO:0001211"}


id: PBO:0082826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved phosphatase acting as a metabolite repair enzyme; shows specific dephosphorylating activity on two side-products of central carbohydrate metabolism, 2-phosphoglycolate and 4-phosphoerythronate; alkaline phosphatase specific for p-nitrophenyl phosphate; also has protein phosphatase activity; human ortholog PGP shows similar substrate specificity, deletion causes similar metabolite accumulation phenotypes, suggesting conserved role in eliminating glycolytic byproducts","termid":"PBO:0082826"}


id: MONDO:0021581
data:
  {"annotated_genes":["SJAG_03905","SJAG_01013","SJAG_01748","SJAG_01151","SJAG_03453","SJAG_02855","SJAG_01349","SJAG_03429","SJAG_00031","SJAG_05979","SJAG_04287","SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89193,89040,89039,89194,89041,89038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[87999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[87168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[88564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[88623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[87502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[87503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[88519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"Neoplasms composed of connective tissue, including elastic, mucous, reticular, osseous, and cartilaginous tissue. The concept does not refer to neoplasms located in connective tissue.","definition_xrefs":["MESH:D009372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_01013":null,"SJAG_01151":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_02855":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_04287":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"connective tissue neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.2","SCTID:126598008","MEDGEN:45035","UMLS:C0027656"],"synonyms":[{"name":"connective tissue neoplasm","type":"exact"},{"name":"connective tissue neoplasm (disease)","type":"exact"},{"name":"connective tissue neoplasms","type":"related"},{"name":"connective tissue tumor","type":"exact"},{"name":"connective tissue tumour","type":"exact"},{"name":"neoplasm of connective tissue","type":"exact"},{"name":"neoplasm of connective tissues","type":"exact"},{"name":"neoplasm, connective tissue","type":"related"},{"name":"tumor of connective tissue","type":"exact"},{"name":"tumour of connective tissue","type":"exact"}],"termid":"MONDO:0021581","terms_by_termid":{"MONDO:0002629":null,"MONDO:0007205":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0007908":null,"MONDO:0009050":null,"MONDO:0010621":null,"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0021581"}}}


id: GO:0015627
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large protein complex, containing 12-15 subunits, that spans the cell envelope of Gram-negative bacteria and mediates the movement of proteins into the extracellular environment. The complex includes a component in the cytoplasm, an inner membrane subcomplex that reaches into the periplasmic compartment and a secretion pore in the outer membrane. Proteins using the Type II pathway are transported across the cytoplasmic membrane by the Sec or Tat complex.","definition_xrefs":["PMID:16448494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"type II protein secretion system complex","synonyms":[{"name":"MTB","type":"exact"},{"name":"Sec-dependent secretion system-associated complex","type":"related"},{"name":"T2SS-associated complexes","type":"exact"},{"name":"general secretion pathway-associated complex","type":"related"},{"name":"main terminal branch","type":"exact"}],"termid":"GO:0015627"}


id: MONDO:0024653
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the bones and structures of the skull.","definition_xrefs":["NCIT:C3375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"skull disorder","termid":"MONDO:0024654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"skull neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D012888","ICD9:239.2","MEDGEN:11457","SCTID:126538005","UMLS:C0037305"],"synonyms":[{"name":"neoplasm of skull","type":"exact"},{"name":"neoplasm of the skull","type":"exact"},{"name":"skull neoplasm","type":"exact"},{"name":"skull tumor","type":"exact"},{"name":"skull tumour","type":"exact"},{"name":"tumor of skull","type":"exact"},{"name":"tumor of the skull","type":"exact"},{"name":"tumour of skull","type":"exact"},{"name":"tumour of the skull","type":"exact"}],"termid":"MONDO:0024653","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0024653"}}}


id: PBO:0114437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPICE1-CFAP44 readthrough (NMD candidate)","termid":"PBO:0114437"}


id: PBO:0039923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 25","termid":"PBO:0039923"}


id: FYPO:0006936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002126"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0005544"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane at cell division site during vegetative growth","synonyms":[{"name":"abolished protein localisation to plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abolished protein localization in plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell membrane at cell division site during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during mitotic cell cycle","type":"related"},{"name":"protein localization to plasma membrane at cell division site abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006936"}


id: PBO:0054682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2090","termid":"PBO:0054682"}


id: PBO:0076668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 1 pseudogene 1","termid":"PBO:0076668"}


id: MONDO:0024651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"drug-induced osteoporosis","termid":"MONDO:0024650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"corticosteroid-induced osteoporosis","secondary_identifiers":["UMLS:C1272167","ICD9:733.09","SCTID:390833005","MEDGEN:695753"],"synonyms":[{"name":"osteoporosis caused by corticosteroid","type":"related"},{"name":"osteoporosis due to corticosteroid","type":"exact"}],"termid":"MONDO:0024651","xrefs":{"Monarch":{"xref_id":"0024651"}}}


id: PBO:0047941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(14)(q23)","termid":"PBO:0047941"}


id: MONDO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term that refers to vascular neoplasms with a prominent hemangiopericytic growth pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericytic neoplasm","termid":"MONDO:0002604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiopericytic tumor","secondary_identifiers":["NCIT:C7076","DOID:3850","UMLS:C0476144","MEDGEN:99196"],"synonyms":[{"name":"hemangiopericytic neoplasm","type":"exact"}],"termid":"MONDO:0002789","xrefs":{"Monarch":{"xref_id":"0002789"}}}


id: PBO:0082821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NAPDH-dependent diflavin reductase; component of an early step in the cytosolic Fe-S protein assembly (CIA) machinery; transfers electrons from NADPH to the Fe-S cluster of Dre2p; plays a pro-death role under oxidative stress; Tah18p-dependent nitric oxide synthesis confers high-temperature stress tolerance; possible target for development of antifungal drugs","termid":"PBO:0082821"}


id: MONDO:0800133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A respiratory malformation characterized by the presence of both bronchi (albeit rudimentary) and alveoli in an under-developed lobe. Both the size and the weight of the lung are reduced. The true prevalence is not well known (1.4% of all births according to Knox et al. 13), but in cases of premature rupture of membranes at 15-28 weeks gestation, the reported prevalence of pulmonary hypoplasia ranges from 9 to 28%. Factors that contribute to pulmonary hypoplasia include adequate volume of the thoracic cavity, pulmonary fluid dynamics, and abnormal fetal breathing movements.","definition_xrefs":["PMID:14610245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypoplasia","secondary_identifiers":["MEDGEN:78574","NCIT:C99035","UMLS:C0265783"],"termid":"MONDO:0800133","xrefs":{"Monarch":{"xref_id":"0800133"}}}


id: GO:0038194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by thyroid-stimulating hormone (thyrotropin) binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:10809230","GOC:gap"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"thyroid-stimulating hormone signaling pathway","synonyms":[{"name":"TSH signaling pathway","type":"exact"},{"name":"thyrotropin signaling pathway","type":"exact"}],"termid":"GO:0038194"}


id: PBO:0051792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCH antisense RNA 1","termid":"PBO:0051792"}


id: MONDO:0011798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration","secondary_identifiers":["OMIM:607236","Orphanet:157855","MESH:C564603","MEDGEN:337612","UMLS:C1846582"],"synonyms":[{"name":"harp syndrome","type":"related"},{"name":"hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration","type":"exact"}],"termid":"MONDO:0011798","xrefs":{"Monarch":{"xref_id":"0011798"}}}


id: GO:0060084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of communication from a neuron to a smooth muscle in the bladder that contributes to the expulsion of urine from the body.","definition_xrefs":["GOC:dph","PMID:15827347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular synaptic transmission","termid":"GO:0007274"},{"relation_name":"part_of","term_name":"micturition","termid":"GO:0060073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission involved in micturition","synonyms":[{"name":"synaptic transmission involved in urination","type":"related"}],"termid":"GO:0060084"}


id: GO:2000422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"is_a","term_name":"regulation of eosinophil migration","termid":"GO:2000416"},{"relation_name":"regulates","term_name":"eosinophil chemotaxis","termid":"GO:0048245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil chemotaxis","termid":"GO:2000422"}


id: MONDO:0016754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vestibular schwannoma (obsolete MONDO:0016754)","termid":"MONDO:0016754","xrefs":{"Monarch":{"xref_id":"0016754"}}}


id: PBO:0005113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mcp2","termid":"PBO:0005113"}


id: GO:0099013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a neuronal dense core vesicle membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule lumen","termid":"GO:0098898"},{"relation_name":"part_of","term_name":"neuronal dense core vesicle","termid":"GO:0098992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"neuronal dense core vesicle lumen","termid":"GO:0099013"}


id: GO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus contributing to an immune response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"},{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"cytokine production involved in immune response","secondary_identifiers":["GO:0002374","GO:0002375"],"synonyms":[{"name":"cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"cytokine production during immune response","type":"related"},{"name":"cytokine secretion during immune response","type":"related"},{"name":"cytokine secretion involved in immune response","type":"related"}],"termid":"GO:0002367"}


id: PBO:0027315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasmic_stress_granule","termid":"PBO:0027315"}


id: GO:0034131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 1 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 1 signaling pathway","termid":"GO:0034130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 1 signaling pathway","synonyms":[{"name":"regulation of TLR1 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034131"}


id: PBO:0070488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 23","termid":"PBO:0070488"}


id: MONDO:0020271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete phakomatosis with eye involvement (obsolete MONDO:0020271)","secondary_identifiers":["Orphanet:98701"],"termid":"MONDO:0020271","xrefs":{"Monarch":{"xref_id":"0020271"}}}


id: MONDO:0000973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adipose tissue neoplasm of the external ear.","definition_xrefs":["NCIT:C4618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"external ear neoplasm","termid":"MONDO:0021235"},{"relation_name":"is_a","term_name":"benign neoplasm of ear","termid":"MONDO:0021474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external ear lipoma","secondary_identifiers":["ICD9:215.0","MEDGEN:91130","SCTID:188988008","UMLS:C0347423","DOID:10203"],"synonyms":[{"name":"external Ear lipoma","type":"exact"},{"name":"external auditory meatus lipoma","type":"exact"},{"name":"external ear lipoma","type":"exact"},{"name":"lipoma of external Ear","type":"exact"},{"name":"lipoma of external auditory meatus","type":"exact"},{"name":"lipoma of external ear","type":"exact"},{"name":"lipoma of the external Ear","type":"exact"},{"name":"lipoma of the external auditory meatus","type":"exact"},{"name":"lipoma of the external ear","type":"exact"}],"termid":"MONDO:0000973","xrefs":{"Monarch":{"xref_id":"0000973"}}}


id: MONDO:0958178
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87856],"is_not":false,"summary":null,"term":"MONDO:0958178"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataracts, hearing impairment, nephrotic syndrome, and enterocolitis","termid":"MONDO:0957400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"is_obsolete":false,"name":"cataracts, hearing impairment, nephrotic syndrome, and enterocolitis 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:301108","MEDGEN:1840207","UMLS:C5829571"],"termid":"MONDO:0958178","terms_by_termid":{"MONDO:0958178":null},"xrefs":{"Monarch":{"xref_id":"0958178"}}}


id: PBO:0058416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4785","termid":"PBO:0058416"}


id: MONDO:1010474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent truncus arteriosus that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus, non-human animal","termid":"MONDO:1010018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent truncus arteriosus, pig","secondary_identifiers":["OMIA:000795-9823"],"termid":"MONDO:1010474","xrefs":{"Monarch":{"xref_id":"1010474"}}}


id: PBO:0017841
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S Phase Delayed","termid":"PBO:0017841"}


id: FYPO:0004341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, begins later than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PMID:22139357","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fission","termid":"FYPO:0004340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide","synonyms":[{"name":"delayed mitochondrial fission during cellular response to hydrogen peroxide","type":"exact"},{"name":"delayed onset of mitochondrial division","type":"exact"},{"name":"delayed onset of mitochondrial fission during cellular response to H2O2","type":"exact"},{"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"delayed onset of mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitochondrial fission during vegetative growth","type":"exact"},{"name":"delayed onset of mitochondrial proliferation","type":"related"}],"termid":"FYPO:0004341"}


id: PBO:0040254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 10","termid":"PBO:0040254"}


id: MONDO:0020551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hydatidiform mole (obsolete MONDO:0020551)","termid":"MONDO:0020551","xrefs":{"Monarch":{"xref_id":"0020551"}}}


id: GO:0047941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulono-1,4-lactone + NADP+ = D-glucurono-3,6-lactone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.20","RHEA:18925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glucuronolactone reductase activity","secondary_identifiers":["KEGG_REACTION:R03183","MetaCyc:GLUCURONOLACTONE-REDUCTASE-RXN"],"termid":"GO:0047941"}


id: GO:0102103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-coumaroyl)acetyl-CoA + 4-coumaryl-CoA + H2O = bisdemethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["EC:2.3.1.219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"demethoxycurcumin synthase activity","termid":"GO:0102103"}


id: SO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert made from cDNA.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"cDNA","termid":"SO:0000756"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cloned_cDNA_insert","synonyms":[{"name":"cloned cDNA insert","type":"exact"}],"termid":"SO:0000913"}


id: PBO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase [glutamine-hydrolyzing] Gua2 (predicted)","termid":"PBO:0002207"}


id: GO:0045613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plasmatocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"regulates","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasmatocyte differentiation","termid":"GO:0045613"}


id: FYECO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which silver nanoparticles were added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PMID:29294138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ AgNP","synonyms":[{"name":"+ silver nanoparticles","type":"exact"}],"termid":"FYECO:0000353"}


id: PBO:0090678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase S6K family Sck2","termid":"PBO:0090678"}


id: MONDO:0015287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vulvar intraepithelial neoplasia (obsolete MONDO:0015287)","termid":"MONDO:0015287","xrefs":{"Monarch":{"xref_id":"0015287"}}}


id: MONDO:0850201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary alpha tryptasemia syndrome","secondary_identifiers":["MEDGEN:1797172","UMLS:C5565749","DOID:0080714"],"termid":"MONDO:0850201","xrefs":{"Monarch":{"xref_id":"0850201"}}}


id: PBO:0111522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 2","termid":"PBO:0111522"}


id: PBO:0060805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S8","termid":"PBO:0060805"}


id: PBO:0117412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 7","termid":"PBO:0117412"}


id: GO:0062141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that functions with the RNA exosome and contributes to the degradation of abberant transcripts.","definition_xrefs":["PMID:29844170","PMID:21855801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear exosome targeting complex","synonyms":[{"name":"NEXT complex","type":"exact"}],"termid":"GO:0062141"}


id: FYPO:0002765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of tRNA (guanine(9)-N(1))-methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased tRNA methyltransferase activity","termid":"FYPO:0001772"},{"relation_name":"is_a","term_name":"abnormal tRNA (guanine(9)-N(1))-methyltransferase activity","termid":"FYPO:0002763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased tRNA (guanine(9)-N(1))-methyltransferase activity","synonyms":[{"name":"reduced tRNA (guanine(9)-N(1))-methyltransferase activity","type":"exact"}],"termid":"FYPO:0002765"}


id: PBO:0069155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 407, pseudogene","termid":"PBO:0069155"}


id: GO:0044609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that associates with mRNP particles and RNA polymerase II and is proposed to integrate transcript elongation with the regulation of alternative splicing. In humans it is composed of the proteins KIAA1967/DBC1 and ZNF326/ZIRD.","definition_xrefs":["PMID:22446626","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DBIRD complex","termid":"GO:0044609"}


id: GO:0071063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive sensory mechanical stimulus resulting from air flow, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["GOC:mah","PMID:19279637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of wind","synonyms":[{"name":"perception of wind","type":"exact"},{"name":"sensory perception of air flow","type":"exact"}],"termid":"GO:0071063"}


id: FYPO:0004033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at tRNA genes is increased.","definition_xrefs":["PMID:25392932","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at ncRNA genes","termid":"FYPO:0007011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin at tRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at tRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at tRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at transfer RNA genes","type":"exact"}],"termid":"FYPO:0004033"}


id: PBO:0027762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_prospore_membrane_during_meiosis_II_with_protein_mislocalized_to_plasma_membrane","termid":"PBO:0027762"}


id: PBO:0003785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm3 (predicted)","termid":"PBO:0003785"}


id: PR:Q10231
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lanosterol synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.01c","secondary_identifiers":["UniProtKB:Q10231"],"synonyms":[{"name":"2,3-epoxysqualene--lanosterol cyclase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OSC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LSS","type":"exact"},{"name":"oxidosqualene--lanosterol cyclase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10231"}


id: PBO:0042836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP20DC divergent transcript","termid":"PBO:0042836"}


id: SO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudoknots involved in recoding are unique in that, as they play their role as a structure, they are immediately unfolded and their now linear sequence serves as a template for decoding.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudoknot","termid":"SO:0000591"},{"relation_name":"part_of","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoding_pseudoknot","synonyms":[{"name":"recoding pseudoknot","type":"exact"}],"termid":"SO:0000545"}


id: PBO:0039660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP2B1 pseudogene 1","termid":"PBO:0039660"}


id: GO:2001074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric ureteric bud development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"regulates","term_name":"metanephric part of ureteric bud development","termid":"GO:0035502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric ureteric bud development","termid":"GO:2001074"}


id: PBO:0073298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 20","termid":"PBO:0073298"}


id: MONDO:0006222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that arises from the stomach. It is characterized by the presence of syncytiotrophoblast and cytotrophoblast cellular components. It is often associated with lymph node and hematogenous metastases.","definition_xrefs":["NCIT:C95749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant gastric germ cell tumor","termid":"MONDO:0003112"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric choriocarcinoma","secondary_identifiers":["UMLS:C2987398","EFO:1000269","MEDGEN:459624"],"synonyms":[{"name":"gastric choriocarcinoma","type":"exact"}],"termid":"MONDO:0006222","xrefs":{"Monarch":{"xref_id":"0006222"}}}


id: GO:0018656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene + O2 + NADH + H+ = H2O + NAD+ + phenanthrene-3,4-oxide.","definition_xrefs":["PMID:1599252","UM-BBD_reactionID:r0508"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene 3,4-monooxygenase activity (obsolete GO:0018656)","termid":"GO:0018656"}


id: PBO:0051068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 4/OR15-4B (non-functional)","termid":"PBO:0051068"}


id: GO:0051876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pigment granules within a cell towards the cell periphery.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pigment granule dispersal","termid":"GO:0051876"}


id: GO:0001717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of serine, carried by a specialized tRNA(ser) (which can read a UGA anticodon), to selenocysteine.","definition_xrefs":["ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"conversion of seryl-tRNAsec to selenocys-tRNAsec","termid":"GO:0001717"}


id: PBO:0063354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"procollagen C-endopeptidase enhancer 2","termid":"PBO:0063354"}


id: MONDO:0013553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency-centromeric instability-facial anomalies syndrome in which the cause of the disease is a mutation in the ZBTB24 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency-centromeric instability-facial anomalies syndrome","termid":"MONDO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019303"],"is_obsolete":false,"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 2","secondary_identifiers":["MEDGEN:481378","GARD:15751","OMIM:614069","UMLS:C3279748","DOID:0090009"],"synonyms":[{"name":"ICF syndrome 2","type":"exact"},{"name":"ICF2","type":"related"},{"name":"ZBTB24 immunodeficiency-centromeric instability-facial anomalies syndrome","type":"exact"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome type 2","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 2","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome caused by mutation in ZBTB24","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome type 2","type":"exact"}],"termid":"MONDO:0013553","xrefs":{"Monarch":{"xref_id":"0013553"}}}


id: PBO:0080744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XIAP associated factor 1","termid":"PBO:0080744"}


id: PBO:0071027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 29","termid":"PBO:0071027"}


id: PR:O74982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid2 gene.","definition_xrefs":["UniProtKB:O74982","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced death protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.04","synonyms":[{"name":"Spom972h-cid2","type":"exact"}],"termid":"PR:O74982"}


id: MONDO:0017147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic pulmonary arterial hypertension (IPAH) is a sporadic form of pulmonary arterial hypertension (PAH) characterized by elevated pulmonary arterial resistance leading to right heart failure. IPAH is progressive and potentially fatal and not associated with an underlying condition or family history of PAH.","definition_xrefs":["Orphanet:275766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary arterial hypertension","termid":"MONDO:0015924"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic pulmonary arterial hypertension","secondary_identifiers":["ICD9:416.0","NANDO:2201046","MedDRA:10065151","SCTID:697898008","icd11.foundation:265520344","MEDGEN:468368","GARD:21025","UMLS:C3203102"],"synonyms":[{"name":"IPAH","type":"exact"},{"name":"primary pulmonary arterial hypertension","type":"exact"}],"termid":"MONDO:0017147","xrefs":{"Monarch":{"xref_id":"0017147"}}}


id: PBO:0060896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuralized E3 ubiquitin protein ligase 1","termid":"PBO:0060896"}


id: FYPO:0006919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to nucleus during mitotic interphase","synonyms":[{"name":"normal protein localisation to nucleus during mitotic interphase","type":"exact"},{"name":"normal protein localization to nucleus during interphase of mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006919"}


id: PBO:0045692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNLRB2 antisense RNA 1","termid":"PBO:0045692"}


id: PBO:0080311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 75 pseudogene","termid":"PBO:0080311"}


id: GO:0047010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,3R,4S)-3,4-dihydroxycyclohexane-1-carboxylate + NAD+ = (1S,4S)-4-hydroxy-3-oxocyclohexane-1-carboxylate + H+ + NADH.","definition_xrefs":["RHEA:10516","EC:1.1.1.166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxycyclohexanecarboxylate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05315","MetaCyc:1.1.1.166-RXN"],"synonyms":[{"name":"(-)t-3,t-4-dihydroxycyclohexane-c-1-carboxylate-NAD oxidoreductase activity","type":"related"},{"name":"(1S,3R,4S)-3,4-dihydroxycyclohexane-1-carboxylate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"dihydroxycyclohexanecarboxylate dehydrogenase activity","type":"related"}],"termid":"GO:0047010"}


id: GO:0080015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E)-geranyl diphosphate = diphosphate + sabinene.","definition_xrefs":["PMID:9747540","PMID:12566586","RHEA:68636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0009975","GO:0003674"],"is_obsolete":false,"name":"sabinene synthase activity","secondary_identifiers":["MetaCyc:RXN-5103"],"termid":"GO:0080015"}


id: PBO:0034417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_direct_regulator_(obsolete_requires_direct_regulator)","termid":"PBO:0034417"}


id: GO:0044650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to a host cell via adhesion molecules, general stickiness etc., either directly or indirectly.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host cell","termid":"GO:0044650"}


id: PBO:0064984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein BstNI subfamily 1","termid":"PBO:0064984"}


id: MONDO:0015432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 12 syndrome is a rare chromosomal anomaly syndrome with a highly variable phenotype principally characterized by postnatal growth retardation, variable degrees of developmental delay and intellectual disability, microcephaly and facial dysmorphism (incl. epicanthal folds, low-set, cupped ears, prominent nose with flat nasal bridge, high arched palate, micrognathia). Skeletal abnormalities (e.g. pectus excavatum, clinodactyly), congenital heart malformations, cryptorchidism, café-au-lait spots and epilepsy have also been reported.","definition_xrefs":["Orphanet:1439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 12 disorder","termid":"MONDO:0700019"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 12","secondary_identifiers":["UMLS:C0795843","MEDGEN:162879","GARD:1325","MESH:C538298"],"synonyms":[{"name":"R12","type":"related"},{"name":"Ring 12","type":"related"},{"name":"Ring chromosome 12 syndrome","type":"related"},{"name":"Ring chromosome type 12","type":"exact"},{"name":"chromosome 12 ring","type":"related"}],"termid":"MONDO:0015432","xrefs":{"Monarch":{"xref_id":"0015432"}}}


id: MONDO:0004564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anatomic abnormality of the thyroid gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid malformation","secondary_identifiers":["DOID:8433","MEDGEN:209098","UMLS:C0877367","NCIT:C27331"],"synonyms":[{"name":"thyroid gland malformation","type":"exact"}],"termid":"MONDO:0004564","xrefs":{"Monarch":{"xref_id":"0004564"}}}


id: PR:Q9C121
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1002.20 gene.","definition_xrefs":["UniProtKB:Q9C121","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1002.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.20","synonyms":[{"name":"Spom972h-SPAC1002.20","type":"exact"}],"termid":"PR:Q9C121"}


id: GO:2001114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to hepatocyte growth factor stimulus.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to hepatocyte growth factor stimulus","termid":"GO:2001112"},{"relation_name":"positively_regulates","term_name":"cellular response to hepatocyte growth factor stimulus","termid":"GO:0035729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to hepatocyte growth factor stimulus","synonyms":[{"name":"positive regulation of cellular response to HGF stimulus","type":"exact"}],"termid":"GO:2001114"}


id: MONDO:0014789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"CCDC115-CDG","secondary_identifiers":["DOID:0070267","GARD:17845","Orphanet:468684","UMLS:C4225191","MEDGEN:906792","OMIM:616828"],"synonyms":[{"name":"CDG IIo","type":"related"},{"name":"CDG syndrome type IIo","type":"exact"},{"name":"CDG-IIo","type":"exact"},{"name":"CDG2O","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIo","type":"exact"},{"name":"congenital disorder of glycosylation type 2o","type":"exact"},{"name":"congenital disorder of glycosylation type IIo","type":"exact"},{"name":"congenital disorder of glycosylation, type IIo","type":"exact"}],"termid":"MONDO:0014789","xrefs":{"Monarch":{"xref_id":"0014789"}}}


id: PBO:0081394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 233","termid":"PBO:0081394"}


id: MONDO:0004073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dentin dysplasia (obsolete MONDO:0004073)","termid":"MONDO:0004073","xrefs":{"Monarch":{"xref_id":"0004073"}}}


id: PBO:0063464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor beta","termid":"PBO:0063464"}


id: PBO:0049997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 3","termid":"PBO:0049997"}


id: PBO:0017431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_enzyme","termid":"PBO:0017431"}


id: GO:0030923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a cluster of several metal atoms, including manganese or calcium, with one or more bridging (mu-bond) oxygen atoms; amino acids residues in proteins that may ligate the metal oxygen cluster are histidine, aspartate, and glutamate.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete metal incorporation into metallo-oxygen cluster (obsolete GO:0030923)","termid":"GO:0030923"}


id: PATO:0001528
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound amplitude which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sound quality","termid":"PATO:0001519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loud","termid":"PATO:0001528"}


id: MONDO:0001313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute serous otitis media caused by an allergen.","definition_xrefs":["DOID:11558","PMID:15301306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute serous otitis media","termid":"MONDO:0001312"},{"relation_name":"is_a","term_name":"allergic otitis media","termid":"MONDO:0021202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute allergic serous otitis media","secondary_identifiers":["UMLS:C0155418","SCTID:59275002","ICD9:381.04","MEDGEN:509956"],"termid":"MONDO:0001313","xrefs":{"Monarch":{"xref_id":"0001313"}}}


id: PBO:0083240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; expression increased by deletion of NAP1","termid":"PBO:0083240"}


id: GO:0048002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses peptide antigen in association with an MHC protein complex on its cell surface, including proteolysis and transport steps for the peptide antigen both prior to and following assembly with the MHC protein complex. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide antigen","synonyms":[{"name":"antigen presentation, peptide antigen","type":"exact"},{"name":"peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0048002"}


id: GO:0008283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:mb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell population proliferation","synonyms":[{"name":"cell proliferation","type":"related"}],"termid":"GO:0008283"}


id: MONDO:0011189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An arrhythmogenic right ventricular dysplasia associated with variation in the region 2q32.1-q32.3.","definition_xrefs":["DOID:0110073","PMID:9344647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 4","secondary_identifiers":["MEDGEN:356107","OMIM:602087","UMLS:C1865881","MESH:C566583"],"synonyms":[{"name":"ARVC4","type":"exact"},{"name":"ARVD4","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 4","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 4","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 4","type":"related"},{"name":"fanilial arrhythmogenic right ventricular dysplasia 4","type":"exact"}],"termid":"MONDO:0011189","xrefs":{"Monarch":{"xref_id":"0011189"}}}


id: MONDO:0009544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephaly","termid":"MONDO:0016608"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrocephaly/megalencephaly syndrome, autosomal recessive","secondary_identifiers":["MEDGEN:812742","MESH:C537453","OMIM:248000","UMLS:C3806412"],"synonyms":[{"name":"Fryns Dereymaeker Haegeman syndrome","type":"related"},{"name":"MGCPH","type":"related"},{"name":"intellectual disability, macrocephaly, short stature and craniofacial dysmorphism","type":"related"},{"name":"macrocephaly/megalencephaly syndrome, autosomal recessive","type":"exact"},{"name":"mental retardation, macrocephaly, short stature and craniofacial dysmorphism","type":"related"}],"termid":"MONDO:0009544","xrefs":{"Monarch":{"xref_id":"0009544"}}}


id: FYPO:0000965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000965"}


id: GO:0036064
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-tethered, short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum) that is similar in structure to a centriole and derives from it. The cilium basal body is the site of assembly and remodeling of the cilium and serves as a nucleation site for axoneme growth. As well as anchoring the cilium, it is thought to provide a selective gateway regulating the entry of ciliary proteins and vesicles by intraflagellar transport.","definition_xrefs":["GOC:clt","PMID:21750193","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"ciliary basal body","secondary_identifiers":["NIF_Subcellular:sao11978067","GO:0005932"],"synonyms":[{"name":"basal body","type":"broad"},{"name":"cilial basal body","type":"exact"},{"name":"cilium basal body","type":"exact"},{"name":"kinetosome","type":"exact"},{"name":"microtubule basal body","type":"exact"}],"termid":"GO:0036064"}


id: PBO:0040377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit F6","termid":"PBO:0040377"}


id: MONDO:0004846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vaginal bleeding preceding the 20th week of gestation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placental abruption","secondary_identifiers":["UMLS:C0000832","DOID:9667","HP:0011419","MEDGEN:49","NCIT:C26685","SCTID:415105001","EFO:1001754","MESH:D000037","ICD9:640.0","ICD9:640.03","ICD9:641.20"],"synonyms":[{"name":"Abruptio placentae, premature separation of placenta","type":"exact"},{"name":"abruptio placenta","type":"exact"},{"name":"abruptio placentae","type":"exact"},{"name":"placental abruption","type":"exact"},{"name":"placental abruption (disease)","type":"exact"},{"name":"premature separation of placenta","type":"exact"}],"termid":"MONDO:0004846","xrefs":{"Monarch":{"xref_id":"0004846"}}}


id: GO:1905562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular endothelial cell proliferation.","definition_xrefs":["GOC:nc","GO_REF:0000058","GOC:BHF_telomere","PMID:23201774","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"regulates","term_name":"vascular endothelial cell proliferation","termid":"GO:0101023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular endothelial cell proliferation","termid":"GO:1905562"}


id: PBO:0052417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains X1 (pseudogene)","termid":"PBO:0052417"}


id: PBO:0041522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 74","termid":"PBO:0041522"}


id: PBO:0029228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nocodazole","termid":"PBO:0029228"}


