# terms

id: PBO:0038687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTA2 antisense RNA 1","termid":"PBO:0038687"}


id: PBO:0036476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA splicing factor","termid":"PBO:0036476"}


id: GO:0045740
data:
  {"annotated_genes":["SJAG_00364","SJAG_03160","SJAG_03438","SJAG_03048","SJAG_03720","SJAG_03957","SJAG_02074","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119289,105244,114022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[108569,90902,104292,118236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[97627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"},{"annotations":[104296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA replication.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA replication","termid":"GO:0006275"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"positively_regulates","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02074":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"positive regulation of DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-69656"],"synonyms":[{"name":"activation of DNA replication","type":"narrow"},{"name":"stimulation of DNA replication","type":"narrow"},{"name":"up regulation of DNA replication","type":"exact"},{"name":"up-regulation of DNA replication","type":"exact"},{"name":"upregulation of DNA replication","type":"exact"}],"termid":"GO:0045740","terms_by_termid":{"GO:0090297":null,"GO:1903465":null,"GO:1903468":null,"GO:1904514":null}}


id: PATO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being phosphorylated to a more than normal extent, or fully saturated with phosphate groups.","definition_xrefs":["Wikipedia:http://en.wiktionary.org/wiki/hyperphosphorylated"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"phosphorylated","termid":"PATO:0002220"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased phosphorylation","synonyms":[{"name":"hyperphosphorylated","type":"exact"}],"termid":"PATO:0002221"}


id: PBO:0114345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter family, related to 7-keto 8-aminopelargonic acid transporter","termid":"PBO:0114345"}


id: PATO:0001743
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radioactivity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"radioactive","termid":"PATO:0001741"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased radioactivity","synonyms":[{"name":"low radioactivity","type":"exact"}],"termid":"PATO:0001743"}


id: PBO:0045164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal intermediate chain 4","termid":"PBO:0045164"}


id: PBO:0043704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 1","termid":"PBO:0043704"}


id: GO:0030793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-demethylstaurosporine + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + H+ + staurosporine.","definition_xrefs":["RHEA:11696","EC:2.1.1.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3'-demethylstaurosporine O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05757","MetaCyc:2.1.1.139-RXN"],"synonyms":[{"name":"3'-demethoxy-3'-hydroxystaurosporine O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:3'-demethylstaurosporine O-methyltransferase activity","type":"related"},{"name":"staurosporine synthase activity","type":"related"}],"termid":"GO:0030793"}


id: PBO:0067600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 763, pseudogene","termid":"PBO:0067600"}


id: PBO:0086449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannosyltransferase involved in protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family; KTR7 has a paralog, KTR5, that arose from the whole genome duplication","termid":"PBO:0086449"}


id: FYPO:0004131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of succinate dehydrogenase (ubiquinone) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal succinate dehydrogenase (ubiquinone) activity","termid":"FYPO:0003322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased succinate dehydrogenase (ubiquinone) activity","termid":"FYPO:0004131"}


id: GO:0070350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of white fat cell proliferation","synonyms":[{"name":"regulation of white adipocyte proliferation","type":"exact"},{"name":"regulation of white adipose cell proliferation","type":"exact"}],"termid":"GO:0070350"}


id: GO:0005332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + Na+(out) + Cl-(out) = gamma-aminobutyric acid(in) + Na+(in) + Cl(in).","definition_xrefs":["PMID:7861179","PMID:7589472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transmembrane transporter activity","termid":"GO:0015185"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"},{"relation_name":"is_a","term_name":"monocarboxylate:sodium symporter activity","termid":"GO:0140161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"gamma-aminobutyric acid:sodium:chloride symporter activity","secondary_identifiers":["TC:2.A.22.3.2","Reactome:R-HSA-444007"],"synonyms":[{"name":"4-aminobutanoate:sodium symporter activity","type":"exact"},{"name":"4-aminobutyrate:sodium symporter activity","type":"exact"},{"name":"GABA:sodium symporter activity","type":"exact"},{"name":"betaine/GABA:sodium symporter activity","type":"exact"},{"name":"gamma-aminobutyric acid:sodium symporter activity","type":"exact"},{"name":"sodium/chloride-dependent GABA transporter activity","type":"broad"}],"termid":"GO:0005332"}


id: GO:0031318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a folic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of nutrient","termid":"GO:0009594"},{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of folic acid","synonyms":[{"name":"detection of folate","type":"exact"},{"name":"folate detection","type":"exact"},{"name":"folate sensing","type":"exact"},{"name":"folic acid detection","type":"exact"},{"name":"folic acid sensing","type":"exact"}],"termid":"GO:0031318"}


id: GO:0018507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,4R)-3,4-dihydrophenanthrene-3,4-diol + NAD+ = H+ + NADH + phenanthrene-3,4-diol.","definition_xrefs":["EC:1.3.1.49","RHEA:16253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cis-3,4-dihydrophenanthrene-3,4-diol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.3.1.49-RXN","UM-BBD_reactionID:r0488","KEGG_REACTION:R04151"],"synonyms":[{"name":"(+)-cis-3,4-dihydrophenanthrene-3,4-diol:NAD+ 3,4-oxidoreductase activity","type":"related"},{"name":"cis-3,4-dihydroxy-3,4-dihydrophenanthrene dehydrogenase activity","type":"exact"}],"termid":"GO:0018507"}


id: PBO:0026945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_level_oscillation_during_mitotic_cell_cycle","termid":"PBO:0026945"}


id: PBO:0091222
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoLipase B homolog","termid":"PBO:0091222"}


id: PBO:0083848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp42p (EXOSC7)","termid":"PBO:0083848"}


id: PBO:0002937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3i","termid":"PBO:0002937"}


id: PBO:0030268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_unreplicated_DNA","termid":"PBO:0030268"}


id: PBO:0026937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromosome","termid":"PBO:0026937"}


id: PBO:0017518
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin Horse Tails","termid":"PBO:0017518"}


id: GO:0052569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of nitric oxide produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to defense-related symbiont nitric oxide production (obsolete GO:0052569)","synonyms":[{"name":"response to defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052569"}


id: MONDO:0030339
data:
  {"annotated_genes":["SJAG_03617"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88188],"is_not":false,"summary":null,"term":"MONDO:0030339"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03617":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 28, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619453","UMLS:C5562069","MEDGEN:1794279"],"synonyms":[{"name":"MCPH28","type":"exact"},{"name":"microcephaly 28, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0030339","terms_by_termid":{"MONDO:0030339":null},"xrefs":{"Monarch":{"xref_id":"0030339"}}}


id: PBO:0004739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin Grx4","termid":"PBO:0004739"}


id: MONDO:0020621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--scianna system (obsolete MONDO:0020621)","secondary_identifiers":["OMIM:111750"],"synonyms":[{"name":"BLOOD GROUP--SCIANNA SYSTEM","type":"related"},{"name":"SC","type":"related"},{"name":"Scianna Blood Group","type":"related"},{"name":"blood group, Scianna system","type":"exact"}],"termid":"MONDO:0020621","xrefs":{"Monarch":{"xref_id":"0020621"}}}


id: FYPO:0006569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which DNA repair is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000298","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal DNA repair","synonyms":[{"name":"normal DNA repair during mitotic cell cycle","type":"related"},{"name":"normal DNA repair during vegetative growth","type":"exact"}],"termid":"FYPO:0006569"}


id: GO:2000043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac cell fate specification.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"cardiac cell fate specification","termid":"GO:0060912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac cell fate specification","termid":"GO:2000043"}


id: PBO:0028638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiotic_spindle_absent_from_cell_during_meiosis_II","termid":"PBO:0028638"}


id: PBO:0072603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L1 domain containing 1","termid":"PBO:0072603"}


id: MONDO:0014396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the RAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1NN","secondary_identifiers":["MEDGEN:863093","DOID:0110432","GARD:16031","OMIM:615916","UMLS:C4014656"],"synonyms":[{"name":"CMD1NN","type":"exact"},{"name":"RAF1 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1NN","type":"related"},{"name":"cardiomyopathy, dilated, type 1Nn","type":"exact"},{"name":"dilated cardiomyopathy type 1NN","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in RAF1","type":"exact"}],"termid":"MONDO:0014396","xrefs":{"Monarch":{"xref_id":"0014396"}}}


id: SO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enhancer that drives the pattern of transcription and binds to the same TF as the primary enhancer, but is located in the intron of or on the far side of a neighboring gene.","definition_xrefs":["PMID:22083793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow_enhancer","synonyms":[{"name":"shadow enhancer","type":"exact"}],"termid":"SO:0001482"}


id: GO:0075321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the development of an oomycete sporangium, a single-celled or many-celled structure that germinates directly to form an infection hypha or differentiates, through specialized cleavage vesicles, into between 10 and 30 zoospores, which are laterally flagellated.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"},{"relation_name":"is_a","term_name":"sporangium development","termid":"GO:0043582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oomycete sporangium development","termid":"GO:0075321"}


id: PBO:0043110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of inhibitor of nuclear factor kappa B kinase complex","termid":"PBO:0043110"}


id: MONDO:0006144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal neoplasm arising from the cervix with morphologic features resembling Wilms tumor of the kidney.","definition_xrefs":["NCIT:C40236"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical carcinosarcoma","termid":"MONDO:0002877"},{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"Wilms tumor","termid":"MONDO:0006058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical Wilms tumor","secondary_identifiers":["MEDGEN:273129","UMLS:C1516437","DOID:5190"],"synonyms":[{"name":"cervical Wilms tumor","type":"exact"},{"name":"cervical Wilms' tumor","type":"exact"},{"name":"cervical Wilms' tumour","type":"exact"}],"termid":"MONDO:0006144","xrefs":{"Monarch":{"xref_id":"0006144"}}}


id: GO:0002534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of a cytokine following a inflammatory stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"},{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"cytokine production involved in inflammatory response","synonyms":[{"name":"cytokine production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002534"}


id: PBO:0084553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the vacuole; active during alcoholic fermentation; regulated by anaerobiosis, negatively regulated by oxygen; repressed by heme; identical to Pau14p","termid":"PBO:0084553"}


id: CHEBI:30746
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzoic acid","termid":"CHEBI:30746"}


id: PBO:0055057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2473","termid":"PBO:0055057"}


id: GO:0061874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatic stellate cell contraction.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell contraction","termid":"GO:0061873"},{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"positively_regulates","term_name":"hepatic stellate cell contraction","termid":"GO:0061872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatic stellate cell contraction","termid":"GO:0061874"}


id: PBO:0041028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPNT2 pseudogene 1","termid":"PBO:0041028"}


id: MONDO:0015681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pervasive developmental disorder with a disease onset before the age of three and characterized by a dramatic loss of behavioral and developmental functioning after atleast two years of normal development. Manifestations of the disease include loss of speech, incontinence, communication and social interaction problems, stereotypical autistic behaviors and dementia.","definition_xrefs":["Orphanet:168782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"childhood disintegrative disorder","secondary_identifiers":["DOID:13487","GARD:6040","ICD9:299.1","SCTID:61831009","NCIT:C97164","SCTID:71961003","MedDRA:10008522","icd11.foundation:1460615954","UMLS:C0236791","MEDGEN:472967"],"synonyms":[{"name":"childhood disintegrative disease","type":"exact"},{"name":"dementia infantilis","type":"exact"},{"name":"disintegrative psychosis","type":"exact"},{"name":"heller syndrome","type":"exact"},{"name":"heller's syndrome","type":"exact"},{"name":"symbiotic psychosis","type":"exact"}],"termid":"MONDO:0015681","xrefs":{"Monarch":{"xref_id":"0015681"}}}


id: GO:0070735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + glycine + L-glutamyl-[protein] = ADP + glycyl-L-glutamyl-[protein] + H+ + phosphate.","definition_xrefs":["RHEA:67180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein-glycine ligase activity","secondary_identifiers":["Reactome:R-HSA-8867370"],"synonyms":[{"name":"protein glycylase activity","type":"exact"}],"termid":"GO:0070735"}


id: GO:1902357
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"}]},"cv_name":"biological_process","definition":"The process in which 2-isopropylmalate(2-) is transported across a membrane.","definition_xrefs":["GOC:vw","GOC:TermGenie","GOC:dph","PMID:18682385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopropylmalate transport","termid":"GO:0034659"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"2-isopropylmalate(2-) transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902357","terms_by_termid":{"GO:1990556":null}}


id: GO:0016152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + Hg + NADP+ = Hg2+ + NADPH.","definition_xrefs":["RHEA:23856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"mercury (II) reductase (NADP+) activity","secondary_identifiers":["UM-BBD_reactionID:r0406","KEGG_REACTION:R02807","EC:1.16.1.1","MetaCyc:MERCURY-II-REDUCTASE-RXN","GO:0018692"],"synonyms":[{"name":"Hg:NADP+ oxidoreductase activity","type":"related"},{"name":"mer A","type":"related"},{"name":"mercurate(II) reductase activity","type":"related"},{"name":"mercuric ion reductase activity","type":"related"},{"name":"mercuric reductase activity","type":"related"},{"name":"mercury reductase activity","type":"related"},{"name":"mercury(II) reductase activity","type":"related"},{"name":"reduced NADP:mercuric ion oxidoreductase activity","type":"related"}],"termid":"GO:0016152"}


id: PBO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/ transcription initiation factor Taf9","termid":"PBO:0000296"}


id: PBO:0050181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA synthase 1","termid":"PBO:0050181"}


id: PBO:0065345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin like 2A pseudogene 2","termid":"PBO:0065345"}


id: PBO:0063879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class H","termid":"PBO:0063879"}


id: PBO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MIZ","termid":"PBO:0000656"}


id: PBO:0063533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and pleckstrin homology domains 1, pseudogene","termid":"PBO:0063533"}


id: PBO:0061637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16 like 1","termid":"PBO:0061637"}


id: PBO:0071455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 61","termid":"PBO:0071455"}


id: MONDO:0010233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"periventricular nodular heterotopia","termid":"MONDO:0020341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"heterotopia, periventricular, X-linked dominant","secondary_identifiers":["ICD9:742.4","OMIM:300049","GARD:7371","SCTID:448227009","UMLS:C1848213","MEDGEN:376309"],"synonyms":[{"name":"BPNH","type":"related"},{"name":"NHBP","type":"related"},{"name":"PVNH1","type":"related"},{"name":"X-linked periventricular heterotopia","type":"related"},{"name":"bilateral periventricular nodular heterotopia","type":"related"},{"name":"heterotopia familial nodular","type":"related"},{"name":"heterotopia periventricular X-linked dominant","type":"related"},{"name":"heterotopia, familial nodular","type":"related"},{"name":"heterotopia, periventricular nodular, with Frontometaphyseal dysplasia","type":"related"},{"name":"heterotopia, periventricular, 1, X-linked dominant","type":"exact"},{"name":"heterotopia, periventricular, Ehlers-Danlos variant","type":"exact"},{"name":"heterotopia, periventricular, X-linked dominant","type":"exact"},{"name":"nodular heterotopia bilateral periventricular","type":"related"},{"name":"nodular heterotopia, bilateral periventricular","type":"related"},{"name":"periventricular nodular heterotopia 1","type":"related"},{"name":"periventricular nodular heterotopia 4","type":"related"},{"name":"periventricular nodular heterotopia 4, formerly","type":"related"}],"termid":"MONDO:0010233","xrefs":{"Monarch":{"xref_id":"0010233"}}}


id: PBO:0047724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 intronic transcript 1","termid":"PBO:0047724"}


id: PBO:0065974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54 like","termid":"PBO:0065974"}


id: PBO:0036124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcriptional_repression_at_centromere_central_core","termid":"PBO:0036124"}


id: PBO:0072669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 2","termid":"PBO:0072669"}


id: PBO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit Rpp21 (predicted)","termid":"PBO:0016111"}


id: GO:0071538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by an SH2 domain interaction.","definition_xrefs":["GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete SH2 domain-mediated complex assembly (obsolete GO:0071538)","termid":"GO:0071538"}


id: MONDO:0020627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epileptic encephalopathy, infantile or early childhood (obsolete MONDO:0020627)","secondary_identifiers":["OMIMPS:617711"],"termid":"MONDO:0020627","xrefs":{"Monarch":{"xref_id":"0020627"}}}


id: GO:0035782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mature natural killer cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). A mature natural killer cell is a natural killer cell that is developmentally mature and expresses a variety of inhibitory and activating receptors that recognize MHC class and other stress related molecules.","definition_xrefs":["CL:0000824","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell chemotaxis","termid":"GO:0035747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature natural killer cell chemotaxis","synonyms":[{"name":"activated natural killer cell chemotaxis","type":"exact"}],"termid":"GO:0035782"}


id: PBO:0051249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-5-1 (pseudogene)","termid":"PBO:0051249"}


id: GO:0050204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxalomalate = glyoxylate + oxaloacetate.","definition_xrefs":["RHEA:22032","EC:4.1.3.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"oxalomalate lyase activity","secondary_identifiers":["KEGG_REACTION:R00477","MetaCyc:OXALOMALATE-LYASE-RXN"],"synonyms":[{"name":"3-oxalomalate glyoxylate-lyase (oxaloacetate-forming)","type":"related"},{"name":"3-oxalomalate glyoxylate-lyase activity","type":"related"}],"termid":"GO:0050204"}


id: PBO:0076920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor B1, mitochondrial","termid":"PBO:0076920"}


id: PBO:0090522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Got1","termid":"PBO:0090522"}


id: PBO:0027000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_prospore_membrane_formation","termid":"PBO:0027000"}


id: MONDO:0958189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nevoid basal cell carcinoma syndrome","termid":"MONDO:0007187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"basal cell nevus syndrome 2","secondary_identifiers":["OMIM:620343","MEDGEN:1841087","UMLS:C5830451","DOID:0070366"],"termid":"MONDO:0958189","xrefs":{"Monarch":{"xref_id":"0958189"}}}


id: PBO:0065779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine rich 2","termid":"PBO:0065779"}


id: PBO:0034278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_end_sequence","termid":"PBO:0034278"}


id: GO:2000861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of estrogen secretion","synonyms":[{"name":"regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000861"}


id: PBO:0055606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3044","termid":"PBO:0055606"}


id: PBO:0073754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 9","termid":"PBO:0073754"}


id: GO:0052562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the normal execution of an immune response of the host organism. The immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host immune response","secondary_identifiers":["GO:0052561"],"synonyms":[{"name":"down regulation by symbiont of host immune response","type":"exact"},{"name":"down-regulation by symbiont of host immune response","type":"exact"},{"name":"downregulation by symbiont of host immune response","type":"exact"},{"name":"inhibition by symbiont of host immune response","type":"narrow"},{"name":"negative regulation by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of host immune response","type":"exact"},{"name":"suppression by symbiont of host immune response","type":"exact"}],"termid":"GO:0052562"}


id: RO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c has-application-role r iff c has-role r and r is an application role (CHEBI:33232)","direct_ancestors":[{"relation_name":"is_a","term_name":"has_role","termid":"RO:0000087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_application_role","termid":"RO:0002261"}


id: PBO:0069153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 405, pseudogene","termid":"PBO:0069153"}


id: GO:0042451
data:
  {"annotated_genes":["SJAG_01859","SJAG_06634","SJAG_00044","SJAG_03096","SJAG_01070","SJAG_03881","SJAG_00134"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[118844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[71668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[95621,67882,62513,75214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any purine nucleoside, one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside anabolism","type":"exact"},{"name":"purine nucleoside biosynthesis","type":"exact"},{"name":"purine nucleoside formation","type":"exact"},{"name":"purine nucleoside synthesis","type":"exact"}],"termid":"GO:0042451","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046086":null}}


id: GO:0071943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that consists of a heterodimer of the bHLH-ZIP proteins Myc and Max.","definition_xrefs":["PMID:16620031","PMID:16620027","PMID:20170194","GOC:cna"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Myc-Max complex","termid":"GO:0071943"}


id: MONDO:0024553
data:
  {"annotated_genes":["SJAG_00088","SJAG_00319"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88724,88725],"is_not":false,"summary":null,"term":"MONDO:0024553"}]},"cv_name":"mondo","definition":"Any myopathy, lactic acidosis, and sideroblastic anemia in which the cause of the disease is a mutation in the PUS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy, lactic acidosis, and sideroblastic anemia","termid":"MONDO:0000863"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0004069","MONDO:0005336","MONDO:0002280"],"is_obsolete":false,"name":"myopathy, lactic acidosis, and sideroblastic anemia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111185","UMLS:C4551958","OMIM:600462","MEDGEN:1634824"],"synonyms":[{"name":"MLASA1","type":"related"},{"name":"PUS1 myopathy, lactic acidosis, and sideroblastic anaemia","type":"exact"},{"name":"PUS1 myopathy, lactic acidosis, and sideroblastic anemia","type":"exact"},{"name":"mitochondrial myopathy and sideroblastic anaemia","type":"related"},{"name":"mitochondrial myopathy and sideroblastic anemia","type":"related"},{"name":"myopathy, lactic acidosis, and sideroblastic anaemia caused by mutation in PUS1","type":"exact"},{"name":"myopathy, lactic acidosis, and sideroblastic anemia 1","type":"exact"},{"name":"myopathy, lactic acidosis, and sideroblastic anemia caused by mutation in PUS1","type":"exact"}],"termid":"MONDO:0024553","terms_by_termid":{"MONDO:0024553":null},"xrefs":{"Monarch":{"xref_id":"0024553"}}}


id: PBO:0005462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof3","termid":"PBO:0005462"}


id: GO:0032307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of icosanoid secretion","termid":"GO:0032304"},{"relation_name":"is_a","term_name":"regulation of prostaglandin secretion","termid":"GO:0032306"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"prostaglandin secretion","termid":"GO:0032310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of prostaglandin secretion","synonyms":[{"name":"down regulation of prostaglandin secretion","type":"exact"},{"name":"down-regulation of prostaglandin secretion","type":"exact"},{"name":"downregulation of prostaglandin secretion","type":"exact"},{"name":"inhibition of prostaglandin secretion","type":"narrow"},{"name":"negative regulation of prostacyclin secretion","type":"narrow"}],"termid":"GO:0032307"}


id: PBO:0030304
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activation_of_monopolar_cell_growth_at_either_end","termid":"PBO:0030304"}


id: PBO:0064926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 catalytic subunit pseudogene","termid":"PBO:0064926"}


id: GO:0031109
data:
  {"annotated_genes":["SJAG_03835","SJAG_02886","SJAG_01297","SJAG_02609","SJAG_02761","SJAG_07018","SJAG_04312","SJAG_00723","SJAG_02336","SJAG_02045","SJAG_02737","SJAG_00856","SJAG_01224","SJAG_01756","SJAG_01215","SJAG_02624","SJAG_03540","SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[118951],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[91464,120169,100515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[72913,80834,73351],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[108397,102289,118956,119202,102898,101992],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[102899,120695],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[81259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[63031,69386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[103767],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031117"},{"annotations":[72478],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031110"}]},"cv_name":"biological_process","definition":"Assembly or disassembly of microtubules by the addition or removal of tubulin heterodimers from a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00723":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01756":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04312":null,"SJAG_04841":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"microtubule polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"microtubule dynamics","type":"exact"}],"termid":"GO:0031109","terms_by_termid":{"GO:0007019":null,"GO:0007020":null,"GO:0030954":null,"GO:0031110":null,"GO:0031117":null,"GO:0046785":null,"GO:0051415":null,"GO:0051417":null,"GO:0060172":null,"GO:0070462":null}}


id: PBO:0002911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human WDR59 ortholog","termid":"PBO:0002911"}


id: PBO:0055495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2929","termid":"PBO:0055495"}


id: MONDO:0017421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic terminal limb defects (obsolete MONDO:0017421)","secondary_identifiers":["Orphanet:294929"],"synonyms":[{"name":"isolated terminal limb defects","type":"related"},{"name":"nonsyndromic terminal limb defects","type":"exact"},{"name":"terminal limb defects","type":"exact"},{"name":"terminal meromelia","type":"exact"}],"termid":"MONDO:0017421","xrefs":{"Monarch":{"xref_id":"0017421"}}}


id: PBO:0031326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cycloheximide","termid":"PBO:0031326"}


id: PBO:0071232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 73","termid":"PBO:0071232"}


id: PATO:0000995
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000995 viscosity value (obsolete PATO:0000995)","termid":"PATO:0000995"}


id: PBO:0071758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 5","termid":"PBO:0071758"}


id: GO:0102115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-gamma-D-isoglutaminyl-N-(beta-D-asparatyl)-L-lysyl-D-alanyl-D-alanine + ammonium + ATP = H+ + ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-gamma-D-isoglutaminyl-N-(beta-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine + AMP + diphosphoric acid.","definition_xrefs":["EC:6.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"peptidoglycan asparagine synthase activity","secondary_identifiers":["MetaCyc:RXN-11338"],"termid":"GO:0102115"}


id: PBO:0085858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0085858"}


id: PBO:0073756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 10","termid":"PBO:0073756"}


id: PBO:0079710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 4","termid":"PBO:0079710"}


id: PBO:0086235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with the CCT complex to stimulate actin folding; has similarity to phosducins; null mutant lethality is complemented by mouse phosducin-like protein MgcPhLP; CCT is short for chaperonin containing TCP-1; essential gene","termid":"PBO:0086235"}


id: GO:0050552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (4S)-limonene + diphosphate.","definition_xrefs":["EC:4.2.3.16","MetaCyc:4.2.3.16-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(4S)-limonene synthase activity","secondary_identifiers":["RHEA:12869"],"synonyms":[{"name":"(-)-(4S)-limonene synthase activity","type":"exact"},{"name":"4S-(-)-limonene synthase activity","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-(4S)-limonene-forming]","type":"related"},{"name":"geranyldiphosphate diphosphate lyase (limonene forming)","type":"related"},{"name":"geranyldiphosphate diphosphate lyase [cyclizing, (4S)-limonene-forming]","type":"related"}],"termid":"GO:0050552"}


id: PBO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease subunit","termid":"PBO:0001896"}


id: PBO:0027314
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_carbendazim","termid":"PBO:0027314"}


id: MONDO:0004662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by the intestinal fluke Heterophyes heterophyes, which is most commonly found in Asia, the Middle East, and Africa, and which is transmitted via consumption of contaminated raw or undercooked fish. Symptoms typically range from asymptomatic to intermittent abdominal pain and diarrhea, with occasional ectopic infection.","definition_xrefs":["NCIT:C128389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterophyiasis","secondary_identifiers":["icd11.foundation:322536023","ICD9:121.6","MEDGEN:508869","UMLS:C0152071","SCTID:22905009","DOID:882"],"synonyms":[{"name":"Heterophyes infection","type":"exact"},{"name":"Heterophyes infectious disease","type":"exact"},{"name":"infections, Heterophyes","type":"related"}],"termid":"MONDO:0004662","xrefs":{"Monarch":{"xref_id":"0004662"}}}


id: MONDO:0045044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the ligament.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligament disorder","secondary_identifiers":["SCTID:60492000","UMLS:C0263976","MEDGEN:538235"],"synonyms":[{"name":"disease of ligament","type":"exact"},{"name":"disease or disorder of ligament","type":"exact"},{"name":"disorder of ligament","type":"exact"},{"name":"ligament disease or disorder","type":"exact"}],"termid":"MONDO:0045044","xrefs":{"Monarch":{"xref_id":"0045044"}}}


id: MOD:01673
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminohexose group through a glycosidic bond.","definition_xrefs":["Unimod:43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylhexosaminylated residue","termid":"MOD:00436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylaminohexosylated residue","synonyms":[{"name":"HexNAc","type":"related"},{"name":"HexNAcRes","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"}],"termid":"MOD:01673"}


id: MONDO:0021235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the external ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external ear disorder","termid":"MONDO:0002776"},{"relation_name":"is_a","term_name":"ear neoplasm","termid":"MONDO:0021233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external ear neoplasm","secondary_identifiers":["MEDGEN:87606","NCIT:C4652","UMLS:C0349575","SCTID:277155005"],"synonyms":[{"name":"external Ear tumor","type":"exact"},{"name":"external Ear tumour","type":"exact"},{"name":"external ear neoplasm (disease)","type":"exact"},{"name":"external ear tumor","type":"exact"},{"name":"external ear tumour","type":"exact"},{"name":"neoplasm of external Ear","type":"exact"},{"name":"neoplasm of external ear","type":"exact"},{"name":"neoplasm of the external Ear","type":"exact"},{"name":"tumor of external Ear","type":"exact"},{"name":"tumor of external ear","type":"exact"},{"name":"tumor of the external Ear","type":"exact"},{"name":"tumour of external Ear","type":"exact"},{"name":"tumour of external ear","type":"exact"},{"name":"tumour of the external Ear","type":"exact"}],"termid":"MONDO:0021235","xrefs":{"Monarch":{"xref_id":"0021235"}}}


id: MONDO:0000780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Prunus armeniaca.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete apricot allergy (obsolete MONDO:0000780)","secondary_identifiers":["DOID:0060505"],"synonyms":[{"name":"Prunus armeniaca allergic disease","type":"exact"},{"name":"Prunus armeniaca caused allergic disease","type":"exact"},{"name":"Prunus armeniaca fruit allergy","type":"exact"},{"name":"allergy of Prunus armeniaca","type":"exact"}],"termid":"MONDO:0000780","xrefs":{"Monarch":{"xref_id":"0000780"}}}


id: PBO:0042641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 16 pseudogene","termid":"PBO:0042641"}


id: GO:0034674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha5 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"integrin alpha5-beta1 complex","synonyms":[{"name":"ITGA5-ITGB1 complex","type":"narrow"},{"name":"VLA-5 complex","type":"exact"},{"name":"alpha5-beta1 integrin complex","type":"exact"}],"termid":"GO:0034674"}


id: PBO:0029812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_organization_during_mitosis","termid":"PBO:0029812"}


id: GO:1901846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell communication by electrical coupling involved in cardiac conduction.","definition_xrefs":["GOC:TermGenie","PMID:17130302","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication by electrical coupling","termid":"GO:0010650"},{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling involved in cardiac conduction","termid":"GO:1901844"},{"relation_name":"positively_regulates","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell communication by electrical coupling involved in cardiac conduction","synonyms":[{"name":"activation of cell communication by electrical coupling involved in cardiac conduction","type":"narrow"},{"name":"up regulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"up-regulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"upregulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"}],"termid":"GO:1901846"}


id: FYPO:0005993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is normal (i.e. indistinguishable from wild type). Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["GO:0002181","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cytoplasmic translation","synonyms":[{"name":"normal cytoplasmic protein biosynthesis","type":"exact"},{"name":"normal cytoplasmic protein synthesis","type":"exact"},{"name":"normal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"normal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0005993"}


id: PBO:0030293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-glossy_colony_morphology","termid":"PBO:0030293"}


id: MONDO:0003635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare breast adenocarcinoma with sebaceous differentiation.","definition_xrefs":["NCIT:C40369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"},{"relation_name":"is_a","term_name":"sebaceous adenocarcinoma","termid":"MONDO:0006962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"sebaceous breast carcinoma","secondary_identifiers":["MEDGEN:276789","UMLS:C1519207","DOID:5760"],"synonyms":[{"name":"breast sebaceous adenocarcinoma","type":"exact"},{"name":"sebaceous adenocarcinoma of breast","type":"exact"},{"name":"sebaceous breast carcinoma","type":"exact"}],"termid":"MONDO:0003635","xrefs":{"Monarch":{"xref_id":"0003635"}}}


id: GO:0004518
data:
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id: PBO:0057995
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id: GO:0038092
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id: GO:0072229
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id: PBO:0048425
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id: FYPO:0002766
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id: GO:1990752
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id: PBO:0049854
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id: MONDO:0975810
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id: PBO:0052479
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id: GO:0048381
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id: MONDO:0044787
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, keratinizing or non-keratinizing squamous cell carcinoma arising from the mucosal epithelium of the nasal cavity or the paranasal sinuses. It affects most often the maxillary sinus. Less frequently, it arises from the nasal cavity, ethmoid sinus, sphenoid sinus, and frontal sinus. Symptoms include nasal fullness, epistaxis, rhinorhea, pain, and paresthesia. Patients with nasal squamous cell carcinoma usually present earlier than patients with maxillary sinus carcinoma and have a better prognosis compared to the latter group.","definition_xrefs":["NCIT:C68611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"},{"relation_name":"is_a","term_name":"nasal cavity and paranasal sinus carcinoma","termid":"MONDO:0056819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity and paranasal sinus squamous cell carcinoma","secondary_identifiers":["UMLS:C0280332","MEDGEN:124722"],"synonyms":[{"name":"nasal cavity and paranasal sinus squamous cell cancer","type":"exact"},{"name":"nasal cavity and paranasal sinus squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0044787","xrefs":{"Monarch":{"xref_id":"0044787"}}}


id: PBO:0046738
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id: GO:0097300
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id: GO:1901326
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id: GO:0019038
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id: GO:0140539
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id: PBO:0051889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITFG2 antisense RNA 1","termid":"PBO:0051889"}


id: GO:0005488
data:
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id: MONDO:0011045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital syndromic form of split-hand/foot malformation (SHFM). It is characterized by microcephaly, microphthalmia, ectrodactyly of the lower limbs and prognathism. Intellectual deficit has been reported. MMEP syndrome is considered to be a very rare condition, although the exact prevalence remains unknown. The etiology is not completely understood. Disruption of the sorting nexin 3 gene (SNX3; 6q21) has been shown to play a causative role in MMEP, although this was not confirmed in recent studies.","definition_xrefs":["Orphanet:3434"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"MMEP syndrome","secondary_identifiers":["OMIM:601349","UMLS:C1832440","SCTID:715533002","MESH:C537686","GARD:3693","DOID:0111803","MEDGEN:330469"],"synonyms":[{"name":"MCOPS8","type":"exact"},{"name":"MMEP","type":"related"},{"name":"Viljoen Smart syndrome","type":"related"},{"name":"Viljoen-Smart syndrome","type":"exact"},{"name":"microcephaly microphthalmia ectrodactyly of lower limbs and prognathism","type":"related"},{"name":"microcephaly, microphthalmia, ectrodactyly of Lower limbs, and prognathism","type":"related"},{"name":"microcephaly-microphthalmia-ectrodactyly of lower limbs-prognathism syndrome","type":"exact"},{"name":"microphthalmia syndromic 8","type":"related"},{"name":"microphthalmia, syndromic 8","type":"related"},{"name":"syndromic microphthalmia type 8","type":"exact"}],"termid":"MONDO:0011045","xrefs":{"Monarch":{"xref_id":"0011045"}}}


id: PBO:0088072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease component of the SAGA acetylation complex; required for SAGA (Spt-Ada-Gcn5-Acetyltransferase)-mediated deubiquitination of histone H2B","termid":"PBO:0088072"}


id: PR:G2TRR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.32 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.32","synonyms":[{"name":"Spom972h-SPBP8B7.32","type":"exact"}],"termid":"PR:G2TRR5"}


id: FYPO:0003252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing L-proline as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"abolished cell population growth on proline nitrogen source","synonyms":[{"name":"abolished growth on proline nitrogen source","type":"broad"},{"name":"abolished proline utilization","type":"related"},{"name":"abolished vegetative cell population growth on proline nitrogen source","type":"exact"},{"name":"cell population growth on proline nitrogen source abolished","type":"exact"}],"termid":"FYPO:0003252"}


id: PBO:0064891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bdelta pseudogene 1","termid":"PBO:0064891"}


id: GO:0080079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-cellobiose + H2O = 2 D-glucose.","definition_xrefs":["RHEA:30679","PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"cellobiose glucosidase activity","secondary_identifiers":["MetaCyc:RXN-10773"],"synonyms":[{"name":"D-cellobiose glucosidase activity","type":"exact"},{"name":"cellobiose glucohydrolase activity","type":"exact"}],"termid":"GO:0080079"}


id: GO:0042119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a neutrophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte activation","termid":"GO:0036230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil activation","termid":"GO:0042119"}


id: GO:2000767
data:
  {"annotated_genes":["SJAG_02723","SJAG_02043","SJAG_01047"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71535,108603,119141],"is_not":false,"summary":null,"term":"GO:2000767"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytoplasmic translation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation","termid":"GO:2000765"},{"relation_name":"positively_regulates","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01047":null,"SJAG_02043":null,"SJAG_02723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0002181"],"is_obsolete":false,"name":"positive regulation of cytoplasmic translation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:2000767","terms_by_termid":{"GO:2000767":null}}


id: GO:0030647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an aminoglycoside antibiotic, any member of a group of broad spectrum antibiotics, of similar toxicity and pharmacology, that contain an aminodeoxysugar, an amino- or guanidino-substituted inositol ring, and one or more residues of other sugars. The group includes streptomycin, neomycin, framycetin, kanamycin, paromomycin, and gentamicin.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycoside antibiotic metabolic process","synonyms":[{"name":"aminoglycoside antibiotic metabolism","type":"exact"}],"termid":"GO:0030647"}


id: GO:1900111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K9 dimethylation.","definition_xrefs":["GOC:TermGenie","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K9 dimethylation (obsolete GO:1900111)","synonyms":[{"name":"activation of histone H3 K9 dimethylation","type":"narrow"},{"name":"activation of histone H3-K9 dimethylation","type":"narrow"},{"name":"activation of histone lysine H3 K9 dimethylation","type":"narrow"},{"name":"positive regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"positive regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"up regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"up regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"up regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"up-regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"up-regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"up-regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"upregulation of histone H3 K9 dimethylation","type":"exact"},{"name":"upregulation of histone H3-K9 dimethylation","type":"exact"},{"name":"upregulation of histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:1900111"}


id: GO:0015495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + H+(out) = gamma-aminobutyric acid(in) + H+(in).","definition_xrefs":["TC:2.A.3.4.2","TC:2.A.18.5.1","TC:2.A.3.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:proton symporter activity","termid":"GO:0005280"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transmembrane transporter activity","termid":"GO:0015185"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"gamma-aminobutyric acid:proton symporter activity","secondary_identifiers":["GO:0015329","Reactome:R-HSA-428625","GO:0005331","MetaCyc:TRANS-RXN-57","RHEA:28915"],"synonyms":[{"name":"4-aminobutanoate:hydrogen symporter activity","type":"exact"},{"name":"4-aminobutanoate:proton symporter activity","type":"exact"},{"name":"4-aminobutyrate:hydrogen symporter activity","type":"exact"},{"name":"4-aminobutyrate:proton symporter activity","type":"exact"},{"name":"GABA:hydrogen symporter activity","type":"exact"},{"name":"GABA:proton symporter activity","type":"exact"},{"name":"gamma-aminobutyric acid permease activity","type":"exact"},{"name":"gamma-aminobutyric acid:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015495"}


id: GO:0045622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043370"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"T-helper cell differentiation","termid":"GO:0042093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper cell differentiation","synonyms":[{"name":"regulation of T-helper cell development","type":"related"}],"termid":"GO:0045622"}


id: SO:0002254
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The loop portion of a stem loop, which is not folded back upon itself. ","direct_ancestors":[{"relation_name":"is_a","term_name":"stem_loop_region","termid":"SO:0002253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loop","synonyms":[{"name":"loop portion of stem loop","type":"exact"}],"termid":"SO:0002254"}


id: GO:0071575
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that penetrate only the external side of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of external side of plasma membrane (obsolete GO:0071575)","synonyms":[{"name":"integral to external leaflet of plasma membrane","type":"exact"},{"name":"integral to external side of plasma membrane","type":"narrow"}],"termid":"GO:0071575"}


id: GO:1990252
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contributes to the endocytic process and bud growth in yeast. It is involved in the precise timing of actin assembly during endocytosis.","definition_xrefs":["GOC:bhm","PMID:19713939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"clathrin-coated endocytic vesicle","termid":"GO:0045334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0032991","GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Syp1 complex","synonyms":[{"name":"Syp1 dimer","type":"exact"}],"termid":"GO:1990252"}


id: GO:0071558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri- or a dimethyl-lysine residue at position 27 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:20622853","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0032452","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone H3K27me2/H3K27me3 demethylase activity","secondary_identifiers":["Reactome:R-HSA-9822914","EC:1.14.11.68","RHEA:60224","Reactome:R-HSA-3222593","Reactome:R-HSA-5617431","Reactome:R-HSA-5617887","Reactome:R-HSA-9822985"],"synonyms":[{"name":"histone H3-tri/di-methyl-lysine-27 demethylase activity","type":"exact"},{"name":"histone H3K27me2 demethylase activity","type":"related"},{"name":"histone H3K27me3 demethylase activity","type":"related"},{"name":"histone demethylase activity (H3-K27 specific)","type":"broad"}],"termid":"GO:0071558"}


id: PBO:0057122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR205 host gene","termid":"PBO:0057122"}


id: MONDO:0011584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inherited cancer-predisposing syndrome due to biallelic BRCA2 mutations is a rare cancer-predisposing syndrome, associated with the D1 subgroup of Fanconi anemia (FA), characterized by progressive bone marrow failure, cardiac, brain, intestinal or skeletal abnormalities and predisposition to various malignancies. Bone marrow suppression and the incidence of developmental abnormalities are less frequent than in other FA, but cancer risk is very high with the spectrum of childhood cancers including Wilms tumor, brain tumor (often medulloblastoma) and ALL/AML.","definition_xrefs":["Orphanet:319462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021190","MONDO:0005570","MONDO:0002280","MONDO:0005046"],"is_obsolete":false,"name":"Fanconi anemia complementation group D1","secondary_identifiers":["MEDGEN:325420","GARD:17449","MESH:C563980","NCIT:C125705","OMIM:605724","UMLS:C1838457","DOID:0111089","SCTID:766707003"],"synonyms":[{"name":"FAD1","type":"exact"},{"name":"FANCD1","type":"exact"},{"name":"Fad1","type":"related"},{"name":"Fanconi anemia complementation group D1","type":"exact"},{"name":"Fanconi anemia, complementation group D1","type":"related"},{"name":"inherited cancer-predisposing syndrome due to biallelic BRCA2 mutations","type":"related"}],"termid":"MONDO:0011584","xrefs":{"Monarch":{"xref_id":"0011584"}}}


id: PBO:0072222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 5","termid":"PBO:0072222"}


id: MONDO:0019067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Steroid-sensitive nephrotic syndrome (SSNS) is a kidney disease defined by selective proteinuria, hypoalbuminaemia and, on renal biopsy, minimal changes without immunoglobulin deposits.","definition_xrefs":["Orphanet:69061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic nephrotic syndrome","termid":"MONDO:0018170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic steroid-sensitive nephrotic syndrome","secondary_identifiers":["GARD:16678"],"termid":"MONDO:0019067","xrefs":{"Monarch":{"xref_id":"0019067"}}}


id: PBO:0084944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multidrug transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; involved in spore wall assembly; sequence similarity to DTR1 and QDR3, and the triple mutant dtr1 qdr1 qdr3 exhibits reduced dityrosine fluorescence relative to the single mutants; required for resistance to quinidine, ketoconazole, fluconazole, and barban; QDR1 has a paralog, AQR1, that arose from the whole genome duplication","termid":"PBO:0084944"}


id: GO:0030038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of actin filament bundles in which the filaments are loosely packed (approximately 30-60 nm apart) and arranged with opposing polarities; the loose packing allows myosin (usually myosin-II) to enter the bundle.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"contractile actin filament bundle assembly","termid":"GO:0030038"}


id: GO:0043040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in nonribosomal peptide synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation","termid":"GO:0043039"},{"relation_name":"is_a","term_name":"amino acid activation for nonribosomal peptide biosynthetic process","termid":"GO:0043041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"tRNA aminoacylation for nonribosomal peptide biosynthetic process","synonyms":[{"name":"tRNA aminoacylation for nonribosomal peptide anabolism","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide biosynthesis","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide formation","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide synthesis","type":"exact"}],"termid":"GO:0043040"}


id: GO:0046453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dipyrrins (pyrromethanes), compounds containing two pyrrole rings linked through a methine, -CH=, group.","definition_xrefs":["PMID:17430001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dipyrrin metabolic process","synonyms":[{"name":"dipyrrin metabolism","type":"exact"}],"termid":"GO:0046453"}


id: GO:0140296
data:
  {"annotated_genes":["SJAG_02458","SJAG_03095","SJAG_00202","SJAG_00650","SJAG_02174","SJAG_03120","SJAG_01523","SJAG_03900","SJAG_00095","SJAG_00159","SJAG_00692","SJAG_03007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001179"},{"annotations":[73817,72246,79060,58333,67563,77510,72396,78630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017025"},{"annotations":[81015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001096"},{"annotations":[77949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001097"},{"annotations":[73579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001156"}]},"cv_name":"molecular_function","definition":"Binding to a general transcription initiation factor, a protein that contributes to transcription start site selection and transcription initiation.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor binding","termid":"GO:0008134"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00159":null,"SJAG_00202":null,"SJAG_00650":null,"SJAG_00692":null,"SJAG_01523":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_03007":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"general transcription initiation factor binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0140296","terms_by_termid":{"GO:0001096":null,"GO:0001097":null,"GO:0001156":null,"GO:0001179":null,"GO:0017025":null}}


id: PBO:0075921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 13","termid":"PBO:0075921"}


id: GO:0075509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any endocytosis that is involved in the uptake of a virus into a host cell.","definition_xrefs":["GOC:jl","VZ:977","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocytosis involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via endocytosis","type":"related"},{"name":"viral penetration via endocytosis followed by endosome disruption","type":"exact"},{"name":"virus endocytosis by host","type":"exact"}],"termid":"GO:0075509"}


id: PBO:0039393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMZ2 pseudogene 2","termid":"PBO:0039393"}


id: PR:O59834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-specific adenosine deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.14c","secondary_identifiers":["UniProtKB:O59834"],"synonyms":[{"name":"Spom972h-tadA","type":"exact"},{"name":"cytosine aminohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59834"}


id: PBO:0113344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for 20S pre-rRNA processing; involved in processing of the 20S pre-rRNA at site D to generate mature 18S rRNA; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus; relative distribution to the nucleus increases upon DNA replication stress; also detected in peroxisomes","termid":"PBO:0113344"}


id: GO:0120220
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region in the apical portion of multiciliated epithelial cells where the ciliary basal bodies cluster.","definition_xrefs":["PMID:20685736","GOC:krc","PMID:20164345","PMID:29891944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal body patch","synonyms":[{"name":"centriolar patch","type":"exact"}],"termid":"GO:0120220"}


id: PBO:0085324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol-4-phosphate 5-kinase; involved in actin cytoskeleton organization and cell morphogenesis; multicopy suppressor of stt4 mutation","termid":"PBO:0085324"}


id: GO:0035132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the medial fin are generated and organized. Medial fins are unpaired fins of fish, usually located dorsomedially or ventromedially and primarily used for stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic medial fin morphogenesis","synonyms":[{"name":"post-embryonic unpaired fin morphogenesis","type":"exact"}],"termid":"GO:0035132"}


id: MONDO:0976124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with polymicrogyria and seizures","secondary_identifiers":["OMIM:621021"],"termid":"MONDO:0976124","xrefs":{"Monarch":{"xref_id":"0976124"}}}


id: MONDO:0011241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoacromegaly with severe insulin resistance","secondary_identifiers":["MESH:C566531","OMIM:602511","MEDGEN:400727","UMLS:C1865284"],"synonyms":[{"name":"pseudoacromegaly with severe insulin resistance","type":"exact"}],"termid":"MONDO:0011241","xrefs":{"Monarch":{"xref_id":"0011241"}}}


id: PBO:0090988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp36","termid":"PBO:0090988"}


id: MONDO:0800103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any COACH syndrome in which the cause of the disease is a variation in the TMEM67 gene.","definition_xrefs":["MONDO:patterns/OMIM_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COACH syndrome","termid":"MONDO:0100349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"COACH syndrome 1","secondary_identifiers":["MEDGEN:1769861","UMLS:C5435651","OMIM:216360","GARD:15153"],"synonyms":[{"name":"cerebellar vermis hypo/aplasia, oligophrenia, congenital ataxia, ocular coloboma, and hepatic fibrosis","type":"exact"}],"termid":"MONDO:0800103","xrefs":{"Monarch":{"xref_id":"0800103"}}}


id: FYPO:0002054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to hydroxyurea. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to hydroxyurea (obsolete FYPO:0002054)","synonyms":[{"name":"cut during cellular response to HU","type":"exact"},{"name":"cut during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002054"}


id: MOD:01499
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 144.102062 Da","termid":"MOD:01517"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated residue","termid":"MOD:01518"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01499"}


id: GO:1990418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin-like growth factor stimulus.","definition_xrefs":["PMID:21932665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to insulin-like growth factor stimulus","termid":"GO:1990418"}


id: PBO:0017509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rcl1 (predicted)","termid":"PBO:0017509"}


id: PBO:0034441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere-telomerase_complex_assembly","termid":"PBO:0034441"}


id: PBO:0072269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 7","termid":"PBO:0072269"}


id: GO:1901570
data:
  {"annotated_genes":["SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fatty acid derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid derivative biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid derivative anabolism","type":"exact"},{"name":"fatty acid derivative biosynthesis","type":"exact"},{"name":"fatty acid derivative formation","type":"exact"},{"name":"fatty acid derivative synthesis","type":"exact"}],"termid":"GO:1901570","terms_by_termid":{"GO:0035338":null}}


id: GO:0070857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of bile acid biosynthetic process","synonyms":[{"name":"regulation of bile acid anabolism","type":"exact"},{"name":"regulation of bile acid biosynthesis","type":"exact"},{"name":"regulation of bile acid formation","type":"exact"},{"name":"regulation of bile acid synthesis","type":"exact"}],"termid":"GO:0070857"}


id: GO:0006187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGTP, deoxyguanosine triphosphate (2'-deoxyguanosine 5'-triphosphate) from other compounds, including gGDP, deoxyguanosine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dGDP metabolic process","termid":"GO:0046066"},{"relation_name":"is_a","term_name":"dGTP biosynthetic process","termid":"GO:0046071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dGTP biosynthetic process from dGDP","synonyms":[{"name":"dGTP anabolism from dGDP","type":"exact"},{"name":"dGTP formation from dGDP","type":"exact"},{"name":"dGTP synthesis from dGDP","type":"exact"}],"termid":"GO:0006187"}


id: PBO:0078754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 61A","termid":"PBO:0078754"}


id: PR:Q9HGN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03260","PANTHER:PTHR12380:SF10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE affecting a late Golgi compartment protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.07","secondary_identifiers":["UniProtKB:Q9HGN3"],"synonyms":[{"name":"Spom972h-STX6","type":"exact"},{"name":"syntaxin tlg1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGN3"}


id: PR:O60186
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.01","synonyms":[{"name":"Spom972h-rsm10","type":"exact"}],"termid":"PR:O60186"}


id: PBO:0048203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit beta1","termid":"PBO:0048203"}


id: GO:0038109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of stem cell factor to the tyrosine kinase receptor KIT on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription. Stem cell factor (KIT ligand) binding to the receptor Kit mediates receptor dimerization, activation of its intrinsic tyrosine kinase activity and autophosphorylation. The activated receptor then phosphorylates various substrates, thereby activating distinct signaling cascades within the cell that trigger a change in state or activity of the cell.","definition_xrefs":["GOC:signaling","GOC:nhn","PMID:16129412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to stem cell factor stimulus","termid":"GO:0036216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Kit signaling pathway","synonyms":[{"name":"Kit signalling pathway","type":"exact"},{"name":"SCF signaling pathway","type":"exact"},{"name":"stem cell factor receptor signaling pathway","type":"exact"},{"name":"stem cell factor signaling pathway","type":"exact"}],"termid":"GO:0038109"}


id: PBO:0060406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 20, NatB catalytic subunit","termid":"PBO:0060406"}


id: PR:Q09852
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23D3.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transporter C23D3.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.12","synonyms":[{"name":"Spom972h-SPAC23D3.12","type":"exact"}],"termid":"PR:Q09852"}


id: MONDO:0030896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 13","termid":"MONDO:0016911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13q33-q34 deletion syndrome","secondary_identifiers":["UMLS:C5436890","OMIM:619148","MEDGEN:1744234"],"termid":"MONDO:0030896","xrefs":{"Monarch":{"xref_id":"0030896"}}}


id: MONDO:0010237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-plagiocephaly syndrome is characterized by severe intellectual deficit, brachycephaly, plagiocephaly, prominent forehead and coarse facial features. It has been described in two males from one family. Two females belonging to the same family displayed moderate intellectual deficit but no craniofacial dysmorphism.","definition_xrefs":["Orphanet:2898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005497"],"is_obsolete":false,"name":"X-linked intellectual disability-plagiocephaly syndrome","secondary_identifiers":["OMIM:300064","UMLS:C2931516","SCTID:719812008","GARD:2765","MEDGEN:419824","MESH:C537512"],"synonyms":[{"name":"Hyde Forster McCarthy Berry syndrome","type":"related"},{"name":"Hyde Forster-McCarthy-Berry syndrome","type":"exact"},{"name":"intellectual disability, X-linked Hyde-Forster type","type":"related"},{"name":"intellectual disability, X-linked, Hyde-Forster type","type":"related"},{"name":"intellectual disability, X-linked, with craniofacial dysmorphism","type":"related"},{"name":"intellectual disability, plagiocephaly, brachycephaly, prominent forehead, and coarse facial features","type":"related"},{"name":"mental retardation, X-linked Hyde-Forster type","type":"related"},{"name":"mental retardation, X-linked, Hyde-Forster type","type":"related"},{"name":"mental retardation, X-linked, with craniofacial dysmorphism","type":"related"},{"name":"mental retardation, plagiocephaly, brachycephaly, prominent forehead, and coarse facial features","type":"related"},{"name":"plagiocephaly and X-linked intellectual disability","type":"related"},{"name":"plagiocephaly and X-linked mental retardation","type":"related"}],"termid":"MONDO:0010237","xrefs":{"Monarch":{"xref_id":"0010237"}}}


id: PBO:0030453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_homocitrate_synthase_activity","termid":"PBO:0030453"}


id: PBO:0056566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipin TRP cation channel 1","termid":"PBO:0056566"}


id: PBO:0091766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide Mi","termid":"PBO:0091766"}


id: SO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters; Positioned from +28 to +32 with respect to the TSS (+1). Experimental results suggest that the DPE acts in conjunction with the INR_motif to provide a binding site for TFIID in the absence of a TATA box to mediate transcription of TATA-less promoters. Consensus sequence (A|G)G(A|T)(C|T)(G|A|C).","definition_xrefs":["PMID:12537576","PMID:12515390","PMID:12651739","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPE_motif","synonyms":[{"name":"CRWMGCGWKCGCTTS","type":"narrow"},{"name":"DPE motif","type":"exact"},{"name":"downstream core promoter element","type":"exact"}],"termid":"SO:0000015"}


id: PR:000045542
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 1 (Schizosaccharomyces pombe) that has been phosphorylated on a Thr residue (Thr-167) within the T-Loop, and Thr-14 and Tyr-15 within the ATP binding region. UniProtKB:P04551, Thr-14/Thr-167, MOD:00047|Tyr-15, MOD:00048.","definition_xrefs":["PMID:26131711","PRO:CNA","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc2/Phos:(T14,Y15,T167)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"Cdc2 phosphorylated 3","type":"related"},{"name":"Cdc2-Hf","type":"exact"},{"name":"PomBase_original_PRO_term_name: cyclin-dependent kinase 1 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc2/Phos:3","type":"exact"},{"name":"UniProtKB:P04551, Thr-14/Thr-167, MOD:00047|Tyr-15, MOD:00048","type":"exact"},{"name":"cdc2/Phos:(T14,Y15,T167)","type":"exact"}],"termid":"PR:000045542"}


id: MONDO:0041403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition where a toxic reaction in the optic nerve results in visual loss. Various poisonous substances may cause the condition as well as nutritional factors.","definition_xrefs":["Wikipedia:Toxic_amblyopia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"suppression amblyopia","termid":"MONDO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic amblyopia","secondary_identifiers":["MEDGEN:536749","UMLS:C0237979","SCTID:30483005"],"synonyms":[{"name":"nutritional optic neuropathy","type":"narrow"},{"name":"tobacco amblyopia","type":"narrow"}],"termid":"MONDO:0041403","xrefs":{"Monarch":{"xref_id":"0041403"}}}


id: MOD:00463
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 3'-hydroxy-L-kynurenine.","definition_xrefs":["Unimod:350#W","OMSSA:58","PubMed:9252331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-hydroxy-L-kynurenine","synonyms":[{"name":"Trp->Hydroxykynurenin","type":"related"},{"name":"hydroxykynureninw","type":"exact"},{"name":"tryptophan oxidation to hydroxykynurenin","type":"related"}],"termid":"MOD:00463"}


id: PBO:0017927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc15","termid":"PBO:0017927"}


id: PBO:0044084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A3","termid":"PBO:0044084"}


id: PBO:0027897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snRNA_level","termid":"PBO:0027897"}


id: GO:0006697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecdysone, (22R)-2-beta,3-beta,14,22,25-pentahydroxycholest-7-en-6-one, an ecdysteroid found in insects.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ecdysone metabolic process","termid":"GO:0008205"},{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"ecdysteroid biosynthetic process","termid":"GO:0045456"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ecdysone biosynthetic process","synonyms":[{"name":"ecdysone anabolism","type":"exact"},{"name":"ecdysone biosynthesis","type":"exact"},{"name":"ecdysone formation","type":"exact"},{"name":"ecdysone synthesis","type":"exact"}],"termid":"GO:0006697"}


id: MONDO:1011682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal gland disease, non-human animal","secondary_identifiers":["OMIA:002523"],"termid":"MONDO:1011682","xrefs":{"Monarch":{"xref_id":"1011682"}}}


id: GO:0050577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-fucose + NAD+ = GDP-4-dehydro-6-deoxy-D-mannose + NADH + H+.","definition_xrefs":["MetaCyc:1.1.1.271-RXN","EC:1.1.1.271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"GDP-L-fucose synthase activity","secondary_identifiers":["Reactome:R-HSA-6787642","RHEA:18885"],"synonyms":[{"name":"GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase activity","type":"related"},{"name":"GDP-L-fucose:NADP+ 4-oxidoreductase (3,5-epimerizing)","type":"related"},{"name":"GDP-fucose synthetase activity","type":"related"}],"termid":"GO:0050577"}


id: FYPO:0006635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to cell tip during mitotic interphase","synonyms":[{"name":"normal protein localisation to cell tip during mitotic interphase","type":"exact"},{"name":"normal protein localization to cell end during mitotic interphase","type":"exact"},{"name":"normal protein localization to cell tip during interphase during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell tip during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006635"}


id: PBO:0028376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_oxanine_DNA_N-glycosylase_activity","termid":"PBO:0028376"}


id: FYPO:0000235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to osmotic stress is abnormal. Translation may be down-regulated to a greater extent than normal, and may not be restored to normal levels post-stress.","definition_xrefs":["PMID:18065650","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to osmotic stress","termid":"FYPO:0000193"},{"relation_name":"is_a","term_name":"abnormal regulation of translation in response to stress during vegetative growth","termid":"FYPO:0001332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of translation in response to osmotic stress","synonyms":[{"name":"abnormal regulation of translation in response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of translation in response to osmotic stress during vegetative growth","type":"exact"},{"name":"abnormal translational regulation in response to osmotic stress","type":"exact"},{"name":"defective in recovery of translation after hyperosmotic shock","type":"related"}],"termid":"FYPO:0000235"}


id: PBO:0046184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 3","termid":"PBO:0046184"}


id: MONDO:0006624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Symptom of overactive detrusor muscle of the urinary bladder that contracts with abnormally high frequency and urgency. Overactive bladder is characterized by the frequent feeling of needing to urinate during the day, during the night, or both. urinary incontinence may or may not be present.","definition_xrefs":["MESH:D053201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overactive bladder","secondary_identifiers":["icd11.foundation:1118102209","SCTID:236633002","DOID:0070355","MedDRA:10020853","ICD9:596.51","UMLS:C0878773","HP:0000012","EFO:1000781","MEDGEN:168058"],"synonyms":[{"name":"overactive bladder","type":"exact"},{"name":"overactive bladder (disease)","type":"exact"}],"termid":"MONDO:0006624","xrefs":{"Monarch":{"xref_id":"0006624"}}}


id: GO:0051509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + tomatidine = UDP + O-glucosyl-tomatidine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tomatidine UDP-glucosyltransferase activity (obsolete GO:0051509)","termid":"GO:0051509"}


id: PBO:0066787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 86","termid":"PBO:0066787"}


id: FYPO:0002303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and has one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"monoseptate","termid":"FYPO:0001225"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"},{"relation_name":"is_a","term_name":"mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0007664"},{"relation_name":"output_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0001320","FYPO:0000337","FYPO:0001985","FYPO:0000004","FYPO:0005447"],"is_obsolete":false,"name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","synonyms":[{"name":"displaced nucleus with septum","type":"related"},{"name":"inviable mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable with septation in the absence of nuclear division","type":"related"},{"name":"inviable with septation independent of mitosis","type":"related"},{"name":"inviable with septation without nuclear division","type":"related"},{"name":"lethal; mononucleate monoseptate vegetative cell","type":"exact"}],"termid":"FYPO:0002303"}


id: PBO:0046969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member F","termid":"PBO:0046969"}


id: PBO:0046938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member C","termid":"PBO:0046938"}


id: PBO:0000105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase (predicted)","termid":"PBO:0000105"}


id: PBO:0056017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM12 pseudogene 1","termid":"PBO:0056017"}


id: GO:0016838
data:
  {"annotated_genes":["SJAG_03485","SJAG_00432","SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003856"},{"annotations":[74495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004107"},{"annotations":[78796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004795"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a carbon-oxygen bond by elimination of a phosphate.","definition_xrefs":["EC:4.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00337":null,"SJAG_00432":null,"SJAG_03485":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carbon-oxygen lyase activity, acting on phosphates","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"termid":"GO:0016838","terms_by_termid":{"GO:0003856":null,"GO:0004107":null,"GO:0004795":null}}


id: PBO:0082168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent methyltransferase; involved in a novel 3-methylhistidine modification of multiple proteins, including ribosomal protein Rpl3p; seven beta-strand MTase family member; null mutant exhibits a weak vacuolar protein sorting defect and caspofungin resistance","termid":"PBO:0082168"}


id: GO:0042151
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle found in cnidoblast (nematoblast) cells. When matured, these stinging organelles store toxins and can deliver them when the cnidocil (a short extension of the cnidocyst) is stimulated by a prey or another stimulus.","definition_xrefs":["DOI:10.1139/z02-135","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"nematocyst","secondary_identifiers":["Wikipedia:Cnidocyte"],"synonyms":[{"name":"cnidocyst","type":"exact"}],"termid":"GO:0042151"}


id: MONDO:0850149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A kidney benign neoplasm that is located in the kidney cortex.","definition_xrefs":["DOID:0080615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephroma","termid":"MONDO:0850149","xrefs":{"Monarch":{"xref_id":"0850149"}}}


id: PBO:0059190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member F","termid":"PBO:0059190"}


id: PBO:0049145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 2","termid":"PBO:0049145"}


id: MONDO:0007017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Detachment of the vitreous humor from the retina.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous disorder","termid":"MONDO:0004860"},{"relation_name":"is_a","term_name":"inherited vitreoretinopathy","termid":"MONDO:0020246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitreous detachment","secondary_identifiers":["EFO:1001238","SCTID:53772007","DOID:9726","NCIT:C50807","MEDGEN:140839","MESH:D020255","UMLS:C0423361","MedDRA:10047650"],"synonyms":[{"name":"detachment Of vitreous","type":"exact"},{"name":"vitreous, detachment Of","type":"exact"}],"termid":"MONDO:0007017","xrefs":{"Monarch":{"xref_id":"0007017"}}}


id: PBO:0050735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 21","termid":"PBO:0050735"}


id: PBO:0067256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 330, pseudogene","termid":"PBO:0067256"}


id: GO:0045037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The targeting and import of proteins into the chloroplast stroma. Import depends on ATP hydrolysis catalyzed by stromal chaperones. Chloroplast stromal proteins, such as the S subunit of rubisco, have a N-terminal stromal-import sequence of about 44 amino acids which is cleaved from the protein precursor after import.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"},{"relation_name":"is_a","term_name":"establishment of protein localization to chloroplast","termid":"GO:0072596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"protein import into chloroplast stroma","synonyms":[{"name":"chloroplast stroma protein import","type":"exact"},{"name":"protein transport into chloroplast stroma","type":"exact"}],"termid":"GO:0045037"}


id: SO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Copia superfamily contain elements coding for specific proteins in this order: GAG, AP, INT, RT, RH. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copia_LTR_retrotransposon","synonyms":[{"name":"Copia LTR retrotransposon","type":"exact"},{"name":"RLC retrotransposon","type":"exact"},{"name":"Ty1 retrotransposon","type":"exact"}],"termid":"SO:0002264"}


id: FYPO:0002380
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121136,121141,121147,121173],"is_not":false,"summary":null,"term":"FYPO:0002380"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, and shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03453":null},"genotype_count":4,"genotypes_by_uniquename":{"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"viable spheroid vegetative cell","references_by_uniquename":{"PMID:29566183":null},"single_locus_annotated_genes":["SJAG_03453","SJAG_01794","SJAG_00514","SJAG_02819"],"single_locus_genotype_uniquenames":["scd2delta","scd1delta","ras1delta","efc25delta"],"synonyms":[{"name":"spheroid viable cell","type":"exact"},{"name":"viable round vegetative cell","type":"related"},{"name":"viable rounded vegetative cell","type":"exact"},{"name":"viable spheroid cell","type":"exact"},{"name":"viable spheroid cell during vegetative growth","type":"exact"},{"name":"viable spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002380","terms_by_termid":{"FYECO:0000137":null,"FYPO:0002380":null}}


id: MONDO:0012769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 14","secondary_identifiers":["GARD:15537","MEDGEN:393832","MESH:C567448","UMLS:C2677772","OMIM:611958"],"synonyms":[{"name":"HPC14","type":"exact"},{"name":"prostate cancer, hereditary, 14","type":"exact"}],"termid":"MONDO:0012769","xrefs":{"Monarch":{"xref_id":"0012769"}}}


id: MONDO:0015075
data:
  {"annotated_genes":["SJAG_04067","SJAG_03453","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87690,89132,89133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A carcinoma arising from the thyroid gland. It is usually an adenocarcinoma and includes the following main subtypes: follicular, papillary, medullary, poorly differentiated, and anaplastic.","definition_xrefs":["NCIT:C4815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid cancer","termid":"MONDO:0002108"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:448216007","Orphanet:100088","EFO:0002892","NANDO:2200074","HP:0002890","MEDGEN:107811","UMLS:C0549473","DOID:3963","MedDRA:10007476","GARD:19763"],"synonyms":[{"name":"cancer of the thyroid","type":"broad"},{"name":"cancer of thyroid","type":"broad"},{"name":"carcinoma of the thyroid","type":"exact"},{"name":"carcinoma of the thyroid gland","type":"exact"},{"name":"carcinoma of thyroid","type":"exact"},{"name":"carcinoma of thyroid gland","type":"exact"},{"name":"head and neck cancer, thyroid","type":"broad"},{"name":"thyroid cancer","type":"broad"},{"name":"thyroid carcinoma","type":"exact"},{"name":"thyroid gland cancer","type":"broad"},{"name":"thyroid gland carcinoma","type":"exact"}],"termid":"MONDO:0015075","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0015075"}}}


id: GO:0034666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha2 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"integrin alpha2-beta1 complex","synonyms":[{"name":"ITGA2-ITGB1 complex","type":"narrow"},{"name":"VLA-2 complex","type":"exact"}],"termid":"GO:0034666"}


id: MOD:00518
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc2dHex2 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(2)dHex(2)","type":"related"},{"name":"HexNAc2dHex2","type":"related"}],"termid":"MOD:00518"}


id: MONDO:0020187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyelashes hypertrophy (obsolete MONDO:0020187)","secondary_identifiers":["Orphanet:98597"],"synonyms":[{"name":"eyelashes polytrichia","type":"exact"},{"name":"eyelashes trichomegalia","type":"exact"}],"termid":"MONDO:0020187","xrefs":{"Monarch":{"xref_id":"0020187"}}}


id: PBO:0003399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex zeta subunit Cct6","termid":"PBO:0003399"}


id: MONDO:0004813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pneumothorax in which air enters into the pleural cavity.","definition_xrefs":["DOID:9534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax","termid":"MONDO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous pneumothorax","secondary_identifiers":["ICD9:011.71","ICD9:011.72","UMLS:C0152600","ICD9:011.7","ICD9:011.73","ICD9:011.70","ICD9:011.76","MEDGEN:509067","SCTID:29731002"],"termid":"MONDO:0004813","xrefs":{"Monarch":{"xref_id":"0004813"}}}


id: PBO:0069668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 945, pseudogene","termid":"PBO:0069668"}


id: GO:1900565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of chanoclavine-I.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete chanoclavine-I catabolic process (obsolete GO:1900565)","synonyms":[{"name":"chanoclavine-I breakdown","type":"exact"},{"name":"chanoclavine-I catabolism","type":"exact"},{"name":"chanoclavine-I degradation","type":"exact"}],"termid":"GO:1900565"}


id: MONDO:0023682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant middle ear paraganglioma arising from paraganglia around the tympanum. Signs and symptoms include a mass behind the tympanum, tinnitus, and conductive hearing loss.","definition_xrefs":["NCIT:C8428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck paraganglioma","termid":"MONDO:0006239"},{"relation_name":"is_a","term_name":"middle ear neuroendocrine tumor","termid":"MONDO:0015071"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tympanic paraganglioma","secondary_identifiers":["UMLS:C0474820","SCTID:253031000","GTR:AN0102048","MESH:D043604","GTR:AN0102047","MEDGEN:105375"],"synonyms":[{"name":"Glomus Tympanicum Tumor","type":"related"},{"name":"Glomus Tympanicum Tumors","type":"related"},{"name":"Glomus Tympanicum Tumour","type":"related"},{"name":"Glomus Tympanicum Tumours","type":"related"},{"name":"Glomus tympanicum paraganglioma","type":"related"},{"name":"Glomus tympanicum tumor","type":"related"},{"name":"Glomus tympanicum tumour","type":"related"},{"name":"Tumor, Glomus Tympanicum","type":"related"},{"name":"Tumors, Glomus Tympanicum","type":"related"},{"name":"Tympanic Paraganglioma","type":"related"},{"name":"Tympanic paraganglioma","type":"related"},{"name":"tympanic paraganglioma","type":"exact"}],"termid":"MONDO:0023682","xrefs":{"Monarch":{"xref_id":"0023682"}}}


id: MONDO:0018083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign disorder of tyrosine metabolism detected upon newborn screening and often observed in premature infants. It shows no clinical symptoms. It is characterized by tyrosinemia, moderate hyperphenylalaninemia, and tyrosiluria that usually resolve after 2 months of age.","definition_xrefs":["Orphanet:3402"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"},{"relation_name":"is_a","term_name":"tyrosinemia","termid":"MONDO:0004741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"transient tyrosinemia of the newborn","secondary_identifiers":["MEDGEN:541331","GARD:5388","UMLS:C0268485"],"synonyms":[{"name":"transient neonatal tyrosinemia","type":"exact"},{"name":"transient tyrosinemia of the neonate","type":"exact"},{"name":"tyrosine-oxidase temporary deficiency","type":"related"}],"termid":"MONDO:0018083","xrefs":{"Monarch":{"xref_id":"0018083"}}}


id: MONDO:0006274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraepithelial lesion of the vulvar squamous epithelium that represents the clinical and morphological manifestation of a productive HPV infection. Low grade refers to the associated low risk of concurrent or future cancer. (WHO, 2014)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar intraepithelial neoplasia","termid":"MONDO:0005198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low grade vulvar intraepithelial neoplasia","secondary_identifiers":["UMLS:C0495106","NCIT:C4760","MEDGEN:99217","EFO:1000330"],"synonyms":[{"name":"VIN 1","type":"exact"},{"name":"VIN 1 of usual type","type":"exact"},{"name":"VIN grade 1","type":"exact"},{"name":"grade 1 VIN","type":"exact"},{"name":"grade 1 vulvar intraepithelial neoplasia","type":"exact"},{"name":"grade I VIN","type":"exact"},{"name":"grade I vulvar intraepithelial neoplasia","type":"exact"},{"name":"intraepithelial neoplasia of the vulva grade 1","type":"exact"},{"name":"intraepithelial neoplasia of vulva grade 1","type":"exact"},{"name":"low grade VIN","type":"exact"},{"name":"vulva intraepithelial neoplasia grade 1","type":"exact"},{"name":"vulvar Low grade squamous intraepithelial lesion","type":"exact"},{"name":"vulvar Low-grade squamous intraepithelial lesion","type":"exact"},{"name":"vulvar flat condyloma","type":"exact"},{"name":"vulvar intraepithelial neoplasia 1 of usual type","type":"exact"},{"name":"vulvar intraepithelial neoplasia grade 1","type":"exact"},{"name":"vulvar mild squamous dysplasia","type":"exact"}],"termid":"MONDO:0006274","xrefs":{"Monarch":{"xref_id":"0006274"}}}


id: PBO:0044093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A1","termid":"PBO:0044093"}


id: GO:0015789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of UDP-N-acetylgalactosamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-N-acetylgalactosamine is a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine transmembrane transport","synonyms":[{"name":"UDP-N-acetylgalactosamine transport","type":"related"}],"termid":"GO:0015789"}


id: PBO:0057967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3688-2","termid":"PBO:0057967"}


id: MOD:00990
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dichloro-L-tyrosine","termid":"MOD:01045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(37)Cl labeled 3',5'-dichlorotyrosine","termid":"MOD:00990"}


id: PBO:0071919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 4","termid":"PBO:0071919"}


id: PBO:0076068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm-tail PG-rich repeat containing 4","termid":"PBO:0076068"}


id: SO:0000077
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region sequence that is complementary to a sequence of messenger RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense","secondary_identifiers":["http://en.wikipedia.org/wiki/Antisense"],"termid":"SO:0000077"}


id: PBO:0081603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 527","termid":"PBO:0081603"}


id: GO:0090106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a pancreatic E cell fate and its capacity to differentiate into a pancreatic E cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"pancreatic epsilon cell differentiation","termid":"GO:0090104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic E cell fate commitment","termid":"GO:0090106"}


id: MONDO:0033010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratodermia variabilis","termid":"MONDO:0017851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis et progressiva 1","secondary_identifiers":["MEDGEN:1633225","DOID:0111195","OMIM:133200","UMLS:C4551486"],"synonyms":[{"name":"EKVP1","type":"related"},{"name":"Greither disease","type":"related"},{"name":"erythrokeratodermia Figurata, congenital familial, in plaques","type":"related"},{"name":"erythrokeratodermia variabilis","type":"related"},{"name":"erythrokeratodermia variabilis ET progressiva 1","type":"related"},{"name":"erythrokeratodermia variabilis Et progressiva","type":"related"},{"name":"erythrokeratodermia variabilis with erythema Gyratum Repens","type":"related"},{"name":"erythrokeratodermia, progressive symmetric","type":"related"},{"name":"keratosis palmoplantaris transgrediens Et progrediens","type":"related"}],"termid":"MONDO:0033010","xrefs":{"Monarch":{"xref_id":"0033010"}}}


id: PBO:0005737
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin subunit CuT3 Interacting protein","termid":"PBO:0005737"}


id: PBO:0057068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 149","termid":"PBO:0057068"}


id: PBO:0048427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine amidotransferase class 1 domain containing 3","termid":"PBO:0048427"}


id: GO:0034223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ascospore wall chitin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ascospore wall chitin biosynthetic process (obsolete GO:0034223)","synonyms":[{"name":"regulation of ascospore wall chitin anabolism","type":"exact"},{"name":"regulation of ascospore wall chitin biosynthesis","type":"exact"},{"name":"regulation of ascospore wall chitin formation","type":"exact"},{"name":"regulation of ascospore wall chitin synthesis","type":"exact"}],"termid":"GO:0034223"}


id: PBO:0042187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B3 pseudogene 1","termid":"PBO:0042187"}


id: MONDO:0015033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cerebral hemorrhage with amyloidosis, Dutch type (HCHWA-D) is a form of HCHWA, a group of familial central nervous system disorders, characterized by severe cerebral amyloid angiopathy (CAA), hemorrhagic and non-hemorrhagic strokes and dementia.","definition_xrefs":["Orphanet:100006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy, APP-related","termid":"MONDO:0011583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"ABeta amyloidosis, dutch type","secondary_identifiers":["ICD10EXP:I68.0*","GARD:16929","ICD9:277.39","MEDGEN:419468","SCTID:56453003","ICD10EXP:E85.4+","UMLS:C2931672"],"synonyms":[{"name":"ABetaE22Q amyloidosis","type":"exact"},{"name":"HCHWA, Dutch type","type":"exact"},{"name":"HCHWA-D","type":"exact"},{"name":"cerebral amyloid angiopathy, APP-related, Dutch variant","type":"exact"},{"name":"hereditary cerebral haemorrhage with amyloidosis, Dutch type","type":"exact"},{"name":"hereditary cerebral hemorrhage with amyloidosis, Dutch type","type":"exact"}],"termid":"MONDO:0015033","xrefs":{"Monarch":{"xref_id":"0015033"}}}


id: SO:1000152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertional duplication where a copy of the segment between the first two breaks listed is inserted at the third break; the insertion is in cytologically the same orientation as its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertional_duplication","termid":"SO:1000154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninverted_insertional_duplication","synonyms":[{"name":"(Drosophila)eDp","type":"related"},{"name":"uninverted insertional duplication","type":"exact"}],"termid":"SO:1000152"}


id: PBO:0068351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 128","termid":"PBO:0068351"}


id: MONDO:0015898
data:
  {"annotated_genes":["SJAG_02148","SJAG_02696","SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[87403,87402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"}]},"cv_name":"mondo","definition":"Abnormal sex differentiation or congenital disorders of sex development caused by abnormal levels of steroid hormones expressed by the gonads or the adrenal glands, such as in congenital adrenal hyperplasia and adrenal cortex neoplasms. Due to abnormal steroid biosynthesis, clinical features include virilism in females; feminization in males; or precocious sexual development in children.","definition_xrefs":["MESH:D047808"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic adrenal disease (obsolete MONDO:0015971)","termid":"MONDO:0015971"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"steroid metabolism disease","termid":"MONDO:0045012"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02148":null,"SJAG_02696":null,"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"adrenogenital syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:131153029","SCTID:267395000","Orphanet:181412","GARD:20226","MedDRA:10061630","MEDGEN:86215","ICD9:255.2","UMLS:C0302280"],"synonyms":[{"name":"adrenogenital disorder","type":"exact"},{"name":"adrenogenital syndrome","type":"exact"},{"name":"androgenital syndrome","type":"exact"},{"name":"congenital adrenal hyperplasia","type":"related"}],"termid":"MONDO:0015898","terms_by_termid":{"MONDO:0011503":null,"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0015898"}}}


id: PBO:0085357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphopantetheine:protein transferase (PPTase); activates mitochondrial acyl carrier protein (Acp1p) by phosphopantetheinylation","termid":"PBO:0085357"}


id: GO:1902041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.","definition_xrefs":["GOC:TermGenie","PMID:17245429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"regulates","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","secondary_identifiers":["Reactome:R-HSA-3371378"],"synonyms":[{"name":"regulation of death receptor-mediated apoptosis","type":"narrow"}],"termid":"GO:1902041"}


id: PBO:0040429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V0E2 antisense RNA 1","termid":"PBO:0040429"}


id: FYPO:0000585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore wall biogenesis does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore wall biogenesis","termid":"FYPO:0000580"},{"relation_name":"is_a","term_name":"abolished cell wall biogenesis","termid":"FYPO:0003639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000121"],"is_obsolete":false,"name":"abolished ascospore wall biogenesis","synonyms":[{"name":"absent spore wall formation","type":"related"},{"name":"ascospore wall biogenesis abolished","type":"exact"},{"name":"spore wall formation abolished","type":"related"},{"name":"spore wall formation: absent","type":"related"}],"termid":"FYPO:0000585"}


id: PBO:0063098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-6 family cell polarity regulator beta","termid":"PBO:0063098"}


id: PBO:0044458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 44, pseudogene","termid":"PBO:0044458"}


id: PBO:0026816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_nitrogen_starvation","termid":"PBO:0026816"}


id: PBO:0056277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAN2A1 divergent transcript","termid":"PBO:0056277"}


id: PATO:0000393
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000393 maximal (obsolete PATO:0000393)","termid":"PATO:0000393"}


id: MONDO:1011585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pituitary-dependent hyperadrenocorticism that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"pituitary-dependent hyperadrenocorticism, non-human animal","termid":"MONDO:1011400"},{"relation_name":"is_a","term_name":"hyperadrenocorticism, dog","termid":"MONDO:1011530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary-dependent hyperadrenocorticism, dog","secondary_identifiers":["OMIA:000247-9615"],"termid":"MONDO:1011585","xrefs":{"Monarch":{"xref_id":"1011585"}}}


id: PBO:0078948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 6-1","termid":"PBO:0078948"}


id: FYPO:0000647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a vegetative cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"cell lysis","termid":"FYPO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"vegetative cell lysis","synonyms":[{"name":"cell lysis during vegetative growth","type":"exact"},{"name":"cytolysis during vegetative growth","type":"exact"},{"name":"inviable, lysed vegetative cell","type":"exact"},{"name":"vegetative cell lysis during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000647"}


id: PBO:0111681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARG pseudogene 1","termid":"PBO:0111681"}


id: PR:Q10145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nab3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C3H8.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.09c","synonyms":[{"name":"Spom972h-nab3","type":"exact"}],"termid":"PR:Q10145"}


id: MONDO:0014728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the CARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 27","secondary_identifiers":["GARD:17856","DOID:0111489","MEDGEN:1799031","OMIM:616672","Orphanet:477774","UMLS:C5567608"],"synonyms":[{"name":"CARS2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"COXPD27","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 27","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in CARS2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 27","type":"exact"}],"termid":"MONDO:0014728","xrefs":{"Monarch":{"xref_id":"0014728"}}}


id: GO:0060047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multicellular organismal process in which the heart decreases in volume in a characteristic way to propel blood through the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart process","termid":"GO:0003015"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart contraction","synonyms":[{"name":"cardiac contraction","type":"related"},{"name":"heart beating","type":"exact"},{"name":"hemolymph circulation","type":"related"}],"termid":"GO:0060047"}


id: PBO:0026782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_progression_following_cellular_response_to_hydroxyurea","termid":"PBO:0026782"}


id: PBO:0116629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 4 pseudogene 2","termid":"PBO:0116629"}


id: PBO:0087254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; inhibits the mitotic exit network (MEN) when the spindle position checkpoint is activated; localized asymmetrically to mother cell cortex, spindle pole body and bud neck; KIN4 has a paralog, FRK1, that arose from the whole genome duplication","termid":"PBO:0087254"}


id: GO:0052317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving camalexin, an indole phytoalexin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"indole phytoalexin metabolic process","termid":"GO:0046217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"camalexin metabolic process","synonyms":[{"name":"camalexin metabolism","type":"exact"}],"termid":"GO:0052317"}


id: PBO:0080124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 2","termid":"PBO:0080124"}


id: GO:0070936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is added to a protein. K48-linked ubiquitination targets the substrate protein for degradation.","definition_xrefs":["PMID:15556404","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K48-linked ubiquitination","synonyms":[{"name":"protein K48-linked polyubiquitination","type":"exact"}],"termid":"GO:0070936"}


id: GO:0015185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of gamma-aminobutyric acid from one side of a membrane to the other. Gamma-aminobutyric acid is 4-aminobutyrate (GABA).","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","GOC:go_curators","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"gamma-aminobutyric acid transmembrane transporter activity","synonyms":[{"name":"4-aminobutanoate transporter activity","type":"exact"},{"name":"4-aminobutyrate transporter activity","type":"exact"},{"name":"GABA transporter activity","type":"exact"},{"name":"betaine/GABA:sodium symporter activity","type":"narrow"}],"termid":"GO:0015185"}


id: MONDO:0011617
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthropathy, erosive","secondary_identifiers":["MEDGEN:342978","MESH:C565273","UMLS:C1853829","OMIM:605935"],"synonyms":[{"name":"arthropathy, erosive","type":"exact"}],"termid":"MONDO:0011617","xrefs":{"Monarch":{"xref_id":"0011617"}}}


id: SO:0000175
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region about 10-bp upstream of the start point of bacterial transcription units which may be involved in binding RNA polymerase; consensus=TAtAaT. This region is associated with sigma factor 70.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma_70_element","termid":"SO:0001671"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma_ecf_element","termid":"SO:0001913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_10_signal","secondary_identifiers":["http://en.wikipedia.org/wiki/Pribnow_box"],"synonyms":[{"name":"-10 signal","type":"exact"},{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:minus_10_signal","type":"exact"},{"name":"Pribnow Schaller box","type":"exact"},{"name":"Pribnow box","type":"exact"},{"name":"Pribnow-Schaller box","type":"exact"},{"name":"minus 10 signal","type":"exact"}],"termid":"SO:0000175"}


id: PBO:0044881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND6A divergent transcript","termid":"PBO:0044881"}


id: PBO:0092023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Proline (ugg), mitochondrial","termid":"PBO:0092023"}


id: GO:1903661
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id: GO:0051656
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id: PBO:0052518
data:
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id: PBO:0079132
data:
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id: PBO:0065768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminyl-tRNA synthetase 1","termid":"PBO:0065768"}


id: GO:0047736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cellobiose = D-glucosyl-D-mannose.","definition_xrefs":["MetaCyc:CELLOBIOSE-EPIMERASE-RXN","EC:5.1.3.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"cellobiose epimerase activity","secondary_identifiers":["RHEA:23384"],"synonyms":[{"name":"cellobiose 2-epimerase activity","type":"related"}],"termid":"GO:0047736"}


id: GO:0072187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a metanephric cap from unspecified parts. The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"metanephric cap morphogenesis","termid":"GO:0072186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap formation","termid":"GO:0072187"}


id: MONDO:0011931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian cancer","termid":"MONDO:0008170"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian cancer, susceptibility to, 1","secondary_identifiers":["UMLS:C2675601","MEDGEN:390836","OMIM:607893"],"synonyms":[{"name":"OVCAS1","type":"exact"},{"name":"ovarian cancer, susceptibility to","type":"exact"},{"name":"ovarian cancer, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0011931","xrefs":{"Monarch":{"xref_id":"0011931"}}}


id: MONDO:0004360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma arising from the breast tissue.","definition_xrefs":["NCIT:C5189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"extraosseous osteosarcoma","termid":"MONDO:0002621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast extraskeletal osteosarcoma","secondary_identifiers":["MEDGEN:235414","UMLS:C1335149","DOID:7787"],"synonyms":[{"name":"breast extraskeletal osteosarcoma","type":"exact"},{"name":"breast osteosarcoma","type":"exact"},{"name":"breast osteosarcoma (disease)","type":"exact"},{"name":"osteogenic breast sarcoma","type":"exact"},{"name":"osteogenic sarcoma of breast","type":"exact"},{"name":"osteogenic sarcoma of the breast","type":"exact"},{"name":"osteosarcoma of breast","type":"exact"},{"name":"osteosarcoma of the breast","type":"exact"}],"termid":"MONDO:0004360","xrefs":{"Monarch":{"xref_id":"0004360"}}}


id: PBO:0055323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2751","termid":"PBO:0055323"}


id: FYPO:0007163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule-based movement is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}


id: GO:0051359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP611 chromophore cross-link from the alpha-carboxyl carbon of residue n, a methionine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons. This modification is found in the GFP-like fluorescent chromoprotein from the sea anemone Entacmaea quadricolor.","definition_xrefs":["RESID:AA0379","PDB:1UIS","PMID:12185250","PMID:15542608","PDB:1XQM","PMID:12909624","PMID:10852900"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-imino-methionine 5-imidazolinone glycine (obsolete GO:0051359)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-imino-methionine 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-imino-methionine 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051359"}


id: PBO:0016909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug115","termid":"PBO:0016909"}


id: PBO:0071803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reprimo, TP53 dependent G2 arrest mediator homolog","termid":"PBO:0071803"}


id: MONDO:1012026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"black hair follicular dysplasia, non-human animal","termid":"MONDO:1011734"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"black hair follicular dysplasia, cattle","secondary_identifiers":["OMIA:000110-9913"],"termid":"MONDO:1012026","xrefs":{"Monarch":{"xref_id":"1012026"}}}


id: MONDO:0013519
data:
  {"annotated_genes":["SJAG_00083"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87306],"is_not":false,"summary":null,"term":"MONDO:0013519"}]},"cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal recessive mutation of NOLA2 on chromosome 5q35.3.","definition_xrefs":["DOID:0070017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00083":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15739","NCIT:C176926","OMIM:613987","UMLS:C3151441","MEDGEN:462791"],"synonyms":[{"name":"DKCB2","type":"exact"},{"name":"autosomal recessive dyskeratosis congenita 2","type":"related"},{"name":"dyskeratosis congenita, autosomal recessive 2","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive type 2","type":"exact"}],"termid":"MONDO:0013519","terms_by_termid":{"MONDO:0013519":null},"xrefs":{"Monarch":{"xref_id":"0013519"}}}


id: PBO:0004913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein (predicted)","termid":"PBO:0004913"}


id: MONDO:0006921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the order actinomycetales.","definition_xrefs":["MESH:D000193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-positive bacterial infections","termid":"MONDO:0021679"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actinomycetales infectious disease","secondary_identifiers":["NCIT:C84534","MEDGEN:1732","ICD9:039.9","UMLS:C0001255","SCTID:11817007","EFO:1001122","ICD9:039.8","SCTID:721751007"],"synonyms":[{"name":"actinomycetales caused disease or disorder","type":"exact"},{"name":"actinomycetales disease or disorder","type":"exact"},{"name":"actinomycetales infection","type":"exact"},{"name":"actinomycetales infections","type":"exact"},{"name":"actinomycete infection","type":"exact"},{"name":"actinomycete infections","type":"exact"},{"name":"actinomycosis","type":"related"},{"name":"actinomycotic infection","type":"exact"},{"name":"actinomycotic infectious disease","type":"exact"},{"name":"infection caused by actinomycetales","type":"related"},{"name":"infection, actinomycetales","type":"exact"},{"name":"infection, actinomycete","type":"exact"},{"name":"infections, actinomycetales","type":"exact"},{"name":"infections, actinomycete","type":"exact"}],"termid":"MONDO:0006921","xrefs":{"Monarch":{"xref_id":"0006921"}}}


id: PBO:0085011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of WASP-Arp23 complex; involved in endocytic site formation; directly inhibits Las17p stimulation of Arp23 complex-mediated actin assembly in vitro; may regulate assembly and disassembly of the septin ring; colocalizes and interacts with septin subunits; potential role in actin cytoskeletal organization","termid":"PBO:0085011"}


id: FYPO:0004659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to UV","synonyms":[{"name":"abolished protein phosphorylation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to UV during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to ultraviolet light","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to UV","type":"exact"}],"termid":"FYPO:0004659"}


id: GO:0033220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + amide(out) = ADP + phosphate + amide(in).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase-coupled amide-transporter activity (obsolete GO:0033220)","synonyms":[{"name":"ATP-dependent amide-transporter activity","type":"exact"},{"name":"amide-transporting ATPase activity","type":"exact"}],"termid":"GO:0033220"}


id: PBO:0075808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single stranded DNA binding protein 1","termid":"PBO:0075808"}


id: MONDO:0007020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute neurological disorder characterized by the triad of ophthalmoplegia, ataxia, and disturbances of mental activity or consciousness. Eye movement abnormalities include nystagmus, external rectus palsies, and reduced conjugate gaze. thiamine deficiency and chronic alcoholism are associated conditions. Pathologic features include periventricular petechial hemorrhages and neuropil breakdown in the diencephalon and brainstem. Chronic thiamine deficiency may lead to korsakoff syndrome. (Adams et al., Principles of Neurology, 6th ed, pp1139-42; Davis & Robertson, Textbook of Neuropathology, 2nd ed, pp452-3)","definition_xrefs":["MESH:D014899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"alcohol-related disorders","termid":"MONDO:0021698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wernicke encephalopathy","secondary_identifiers":["DOID:2384","Orphanet:97354","MEDGEN:53073","UMLS:C0043121","icd11.foundation:1360335041","ICD9:265.1","ICD10CM:E51.2","SCTID:21007002"],"synonyms":[{"name":"Wernicke's disease","type":"exact"},{"name":"Wernicke's encephalopathy","type":"exact"},{"name":"dementia due to thiamine deficiency","type":"exact"}],"termid":"MONDO:0007020","xrefs":{"Monarch":{"xref_id":"0007020"}}}


id: GO:0071098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to the Src family tyrosine kinase Fyn.","definition_xrefs":["PMID:11684709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha6-beta4 integrin-Fyn complex","synonyms":[{"name":"ITGA6-ITGB4-FYN complex","type":"narrow"}],"termid":"GO:0071098"}


id: MONDO:0025956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ovarian remnant syndrome (ORS) is characterized by the presence of residual ovarian tissue after a woman has had surgery to remove one ovary or both ovaries (oophorectomy). Signs and symptoms may include pelvic pain, a pelvic mass, or the absence of menopause after oophorectomy. The condition may be caused by surgical factors leading to incomplete removal of ovarian tissue, including factors that limit surgical exposure of the ovary or compromise surgical technique. Factors may include pelvic adhesions (limiting ability to see the ovary or causing it to adhere to other tissues); anatomic variations; bleeding during surgery; or poor surgical technique. Treatment is indicated for people with symptoms and typically involves surgery to remove the residual tissue. Therapy for those who refuse surgery, cannot have surgery, or do not have a pelvic mass may include hormonal therapy to suppress ovarian function.","definition_xrefs":["GARD:0007297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian remnant syndrome","secondary_identifiers":["MEDGEN:1856973","icd11.foundation:584962583","UMLS:C5886744"],"termid":"MONDO:0025956","xrefs":{"Monarch":{"xref_id":"0025956"}}}


id: SO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000437 assortment_derived_duplication (obsolete SO:0000437)","termid":"SO:0000437"}


id: MONDO:1011899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olivopontocerebellar degeneration, non-human animal","secondary_identifiers":["OMIA:002454"],"termid":"MONDO:1011899","xrefs":{"Monarch":{"xref_id":"1011899"}}}


id: SO:0000307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Regions of a few hundred to a few thousand bases in vertebrate genomes that are relatively GC and CpG rich; they are typically unmethylated and often found near the 5' ends of genes.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CpG_island","secondary_identifiers":["http://en.wikipedia.org/wiki/CpG_island"],"synonyms":[{"name":"CG island","type":"exact"},{"name":"CpG island","type":"exact"}],"termid":"SO:0000307"}


id: PBO:0058423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4793","termid":"PBO:0058423"}


id: PBO:0063023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 3","termid":"PBO:0063023"}


id: GO:0045856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pole plasm oskar mRNA localization","termid":"GO:0007317"},{"relation_name":"is_a","term_name":"positive regulation of intracellular mRNA localization","termid":"GO:1904582"},{"relation_name":"positively_regulates","term_name":"pole plasm oskar mRNA localization","termid":"GO:0045451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pole plasm oskar mRNA localization","synonyms":[{"name":"activation of pole plasm oskar mRNA localization","type":"narrow"},{"name":"positive regulation of oocyte pole plasm oskar mRNA localization","type":"exact"},{"name":"positive regulation of pole plasm oskar mRNA localisation","type":"exact"},{"name":"stimulation of pole plasm oskar mRNA localization","type":"narrow"},{"name":"up regulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"up-regulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"upregulation of pole plasm oskar mRNA localization","type":"exact"}],"termid":"GO:0045856"}


id: PBO:0064101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIWIL2 divergent transcript","termid":"PBO:0064101"}


id: PBO:0086231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with CCT (chaperonin containing TCP-1) complex; has a role in actin and tubulin folding; has weak similarity to phosducins, which are G-protein regulators","termid":"PBO:0086231"}


id: PBO:0061336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B14, pseudogene","termid":"PBO:0061336"}


id: FYECO:0000455
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leucine was completely excluded from the experimental medium/buffer..","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine absent","termid":"FYECO:0000455"}


id: MONDO:0008284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyposis","termid":"MONDO:0000147"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyposis of gastric fundus without polyposis coli","secondary_identifiers":["MEDGEN:357403","MESH:C566775","OMIM:175505","UMLS:C1868001"],"synonyms":[{"name":"fundic gland polyposis","type":"related"},{"name":"polyposis of gastric fundus without polyposis coli","type":"exact"}],"termid":"MONDO:0008284","xrefs":{"Monarch":{"xref_id":"0008284"}}}


id: MOD:00216
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-formyl-L-lysine.","definition_xrefs":["OMSSA:43","PubMed:15799070","Unimod:122#K","RESID:AA0211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-formyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(formylamino)hexanoic acid","type":"exact"},{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"},{"name":"MOD_RES N6-formyllysine","type":"exact"},{"name":"N(zeta)-formyllysine","type":"exact"},{"name":"N6-formyl-L-lysine","type":"exact"},{"name":"N6-formylated L-lysine","type":"exact"},{"name":"N6FoLys","type":"exact"},{"name":"epsilon-formyllysine","type":"exact"},{"name":"formylk","type":"exact"}],"termid":"MOD:00216"}


id: GO:1904527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of microtubule binding.","definition_xrefs":["GOC:als","PMID:24520051","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of microtubule binding (obsolete GO:1904527)","synonyms":[{"name":"down regulation of microtubule binding","type":"exact"},{"name":"down regulation of microtubule severing activity","type":"related"},{"name":"down regulation of microtubule/chromatin interaction","type":"related"},{"name":"down-regulation of microtubule binding","type":"exact"},{"name":"down-regulation of microtubule severing activity","type":"related"},{"name":"down-regulation of microtubule/chromatin interaction","type":"related"},{"name":"downregulation of microtubule binding","type":"exact"},{"name":"downregulation of microtubule severing activity","type":"related"},{"name":"downregulation of microtubule/chromatin interaction","type":"related"},{"name":"inhibition of microtubule binding","type":"narrow"},{"name":"inhibition of microtubule severing activity","type":"related"},{"name":"inhibition of microtubule/chromatin interaction","type":"related"},{"name":"negative regulation of microtubule severing activity","type":"related"},{"name":"negative regulation of microtubule/chromatin interaction","type":"related"}],"termid":"GO:1904527"}


id: PBO:0052165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 13","termid":"PBO:0052165"}


id: PBO:0087712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; required for proper termination of transcription for some genes; involved in telomere maintenance","termid":"PBO:0087712"}


id: PBO:0049835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high density lipoprotein binding protein","termid":"PBO:0049835"}


id: PBO:0048157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 3","termid":"PBO:0048157"}


id: FYPO:0002683
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000085"},{"annotations":[121203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000088"}],"single_locus_phenotype":[{"annotations":[121334,121653,121589,121601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000097"},{"annotations":[121578,121210,121211,121580,121579,121205,121212,121204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000085"},{"annotations":[121555,121540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000079"},{"annotations":[121333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[121208,121202,121201,121207,121209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000088"},{"annotations":[121132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000106"},{"annotations":[121659,121373,121374,121658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000107"},{"annotations":[121364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000714"},{"annotations":[121335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001214"},{"annotations":[121602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000841"},{"annotations":[121550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007522"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show decreased resistance to a chemical stimulus. Resistance to a chemical is measured by determining the maximum concentration of the chemical at which a population of cells grow and divide. Typically, cells are deemed sensitive to a chemical if they stop growing (and may die) at a concentration of the chemical that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population 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crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01680","SJAG_01205"],"name":"increased sensitivity to chemical","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null,"PMID:27678009":null,"PMID:31150379":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:36058798":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00364","SJAG_01205","SJAG_00266","SJAG_04671","SJAG_00610","SJAG_04287","SJAG_01605","SJAG_02527","SJAG_01680","SJAG_05207","SJAG_01410","SJAG_04312","SJAG_04697","SJAG_01787","SJAG_02592","SJAG_00429"],"single_locus_genotype_uniquenames":["cmp7delta","pmk1delta","chk1delta","pka1delta","atf1delta","cds1delta","sty1delta","rad9delta","rad26delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","pck1delta","rad3delta","crb2delta","pck2delta","mrc1delta","rad51delta","gms1delta"],"synonyms":[{"name":"resistance to chemicals: decreased","type":"related"},{"name":"sensitive to chemical","type":"exact"}],"termid":"FYPO:0002683","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0000079":null,"FYPO:0000085":null,"FYPO:0000087":null,"FYPO:0000088":null,"FYPO:0000097":null,"FYPO:0000106":null,"FYPO:0000107":null,"FYPO:0000714":null,"FYPO:0000841":null,"FYPO:0001214":null,"FYPO:0007522":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0120298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-noradrenaline + L-glutaminyl-[protein] = 5-(R)-noradrenalinyl-L-glutamyl-[protein] + NH4(+).","definition_xrefs":["GOC:sp","PMID:22858378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"peptide noradrenalinyltransferase activity","secondary_identifiers":["RHEA:66560"],"termid":"GO:0120298"}


id: GO:0031908
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of a glyoxysome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal matrix","termid":"GO:0005782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"glyoxysomal lumen","termid":"GO:0031908"}


id: MONDO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypercalciuria, absorptive (obsolete MONDO:0000039)","termid":"MONDO:0000039","xrefs":{"Monarch":{"xref_id":"0000039"}}}


id: PBO:0082083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase; enzyme is ATP-dependent and functions as a dimer; similar to mouse Oplah gene; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; protein abundance increases in response to DNA replication stress","termid":"PBO:0082083"}


id: PBO:0057124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 208a","termid":"PBO:0057124"}


id: PATO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having three or more primary branches diverging radially from a single point.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinodromous","termid":"PATO:0001967"}


id: FYPO:0007849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubules self-assemble into a spindle without the participation of the spindle pole body (SPB) during the first meiotic nuclear division.","definition_xrefs":["PMID:34346498","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"},{"relation_name":"is_a","term_name":"meiotic spindle self-assembly","termid":"FYPO:0007848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000054"],"is_obsolete":false,"name":"spindle self-assembly during meiosis I","synonyms":[{"name":"SPB-independent meiosis I spindle assembly","type":"exact"},{"name":"SPB-independent spindle assembly during meiosis I","type":"exact"},{"name":"acentrosomal meiotic spindle assembly","type":"related"},{"name":"acentrosomal spindle assembly during meiosis I","type":"related"},{"name":"meiosis I spindle self-assembly","type":"exact"},{"name":"meiotic SPB-independent spindle in meiosis I","type":"related"},{"name":"spindle pole body-independent meiosis I spindle assembly","type":"exact"},{"name":"spindle pole body-independent spindle assembly during meiosis I","type":"exact"},{"name":"spindle self-assembly during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007849"}


id: GO:0018365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (protein)-L-serine = (protein)-D-serine.","definition_xrefs":["EC:5.1.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"protein-serine epimerase activity","secondary_identifiers":["MetaCyc:5.1.1.16-RXN","RHEA:10660"],"synonyms":[{"name":"protein-serine racemase activity","type":"related"}],"termid":"GO:0018365"}


id: PR:O13743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pos1 gene.","definition_xrefs":["UniProtKB:O13743","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E8.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.08","synonyms":[{"name":"Spom972h-pos1","type":"exact"}],"termid":"PR:O13743"}


id: GO:0030204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate. They usually occur linked to a protein to form proteoglycans. Two subgroups exist, one in which the sulfate is on the 4-position (chondroitin sulfate A) and the second in which it is in the 6-position (chondroitin sulfate C). They often are polydisperse and often differ in the degree of sulfation from tissue to tissue. The chains of repeating disaccharide are covalently linked to the side chains of serine residues in the polypeptide backbone of a protein by a glycosidic attachment through the trisaccharide unit galactosyl-galactosyl-xylosyl. Chondroitin sulfate B is more usually known as dermatan sulfate.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate metabolic process (obsolete GO:0030204)","secondary_identifiers":["Reactome:R-HSA-1793185"],"synonyms":[{"name":"chondroitin sulfate metabolism","type":"exact"},{"name":"chondroitin sulphate metabolic process","type":"exact"},{"name":"chondroitin sulphate metabolism","type":"exact"}],"termid":"GO:0030204"}


id: GO:1905912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion export across the plasma membrane.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:22362515","GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion export across plasma membrane","termid":"GO:1990034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium ion export across plasma membrane","synonyms":[{"name":"regulation of calcium ion efflux from cell","type":"exact"},{"name":"regulation of calcium ion export from cell","type":"exact"}],"termid":"GO:1905912"}


id: MONDO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with the organism Candida.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidiasis","secondary_identifiers":["ICD9:112.89","ICD9:112.9","MEDGEN:14299","NCIT:C26711","MESH:D002177","DOID:1508","SCTID:78048006","ICD10CM:B37","ICD9:112","UMLS:C0006840"],"synonyms":[{"name":"Candida <Debaryomycetaceae> infection","type":"exact"},{"name":"Candida infection","type":"exact"},{"name":"Candidosis","type":"exact"},{"name":"disseminated candidiasis","type":"narrow"},{"name":"infections, Candida <Debaryomycetaceae>","type":"related"},{"name":"systemic candidiasis","type":"narrow"},{"name":"thrush","type":"exact"}],"termid":"MONDO:0002026","xrefs":{"Monarch":{"xref_id":"0002026"}}}


id: PBO:0045236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 4","termid":"PBO:0045236"}


id: PBO:0057048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 135b","termid":"PBO:0057048"}


id: FYPO:0003156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the monopolar growth of a cell is normal (i.e. indistinguishable from wild type in timing, extent, rate, etc.) in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:24146635","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell growth","termid":"FYPO:0002085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal monopolar cell growth","synonyms":[{"name":"normal monopolar vegetative cell growth","type":"exact"}],"termid":"FYPO:0003156"}


id: GO:0008316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the vitelline membrane of an egg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of vitelline membrane","termid":"GO:0008316"}


id: GO:0045129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction does not require the presence of NAD, and represents the removal of an acetyl group from a histone.","definition_xrefs":["PMID:28450737"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD-independent histone deacetylase activity (obsolete GO:0045129)","synonyms":[{"name":"AcuC","type":"related"}],"termid":"GO:0045129"}


id: PBO:0039874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 31","termid":"PBO:0039874"}


id: SO:0001045
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A MGE region consisting of two fused plasmids resulting from a replicative transposition event.","definition_xrefs":["phigo:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cointegrated_plasmid","synonyms":[{"name":"cointegrated plasmid","type":"exact"},{"name":"cointegrated replicon","type":"exact"}],"termid":"SO:0001045"}


id: MONDO:0014461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the FEZF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 22 with or without anosmia","secondary_identifiers":["DOID:0090081","OMIM:616030","GARD:16050","MEDGEN:863425","ICD10CM:E23.0","UMLS:C4014988"],"synonyms":[{"name":"FEZF1 hypogonadotropic hypogonadism","type":"exact"},{"name":"HH22","type":"related"},{"name":"hypogonadotropic hypogonadism 22 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism 22, with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in FEZF1","type":"exact"}],"termid":"MONDO:0014461","xrefs":{"Monarch":{"xref_id":"0014461"}}}


id: GO:0055100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to adiponectin, a protein hormone produced by adipose tissue that modulates a number of metabolic processes, including glucose regulation and fatty acid catabolism.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:15210937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"adiponectin binding","termid":"GO:0055100"}


id: PBO:0084662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 3-hydroxyacyl-thioester dehydratase; involved in fatty acid biosynthesis, required for respiratory growth and for normal mitochondrial morphology","termid":"PBO:0084662"}


id: GO:0042124
data:
  {"annotated_genes":["SJAG_00218","SJAG_04483","SJAG_01835","SJAG_01290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72818,74775,76294,77647],"is_not":false,"summary":null,"term":"GO:0042124"}]},"cv_name":"molecular_function","definition":"Catalysis of the splitting and linkage of (1->3)-beta-D-glucan molecules, resulting in (1->3)-beta-D-glucan chain elongation.","definition_xrefs":["GOC:jl","PMID:10809732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucanosyltransferase activity","termid":"GO:0042123"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_04483":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0042124","terms_by_termid":{"GO:0042124":null}}


id: GO:0060933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a His-Purkinje cell over time, from its formation to the mature state. These cells form the fibers that regulate cardiac muscle contraction in the ventricles.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"His-Purkinje system cell development","termid":"GO:0060933"}


id: MONDO:0012763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing child absence epilepsy or idiopathic generalized epilepsy, in which the cause of the disease is a mutation in the CACNA1H gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, childhood absence, susceptibility to, 6","secondary_identifiers":["MEDGEN:440896","OMIM:611942","UMLS:C2749872"],"synonyms":[{"name":"CACNA1H childhood absence epilepsy","type":"related"},{"name":"ECA6","type":"exact"},{"name":"childhood absence epilepsy caused by mutation in CACNA1H","type":"related"},{"name":"epilepsy, childhood absence, susceptibility to, 6","type":"exact"},{"name":"epilepsy, childhood absence, susceptibility to, type 6","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 6","type":"related"},{"name":"susceptibility to childhood absence epilepsy 6","type":"exact"}],"termid":"MONDO:0012763","xrefs":{"Monarch":{"xref_id":"0012763"}}}


id: GO:0036215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stem cell factor (SCF) stimulus.","definition_xrefs":["GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stem cell factor","synonyms":[{"name":"response to KIT ligand","type":"exact"},{"name":"response to SCF","type":"exact"},{"name":"response to hematopoietic growth factor KL","type":"exact"},{"name":"response to stem cell factor stimulus","type":"exact"}],"termid":"GO:0036215"}


id: MONDO:0012255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"chromosome inversion disorder","termid":"MONDO:0043678"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 pericentric inversion","secondary_identifiers":["MESH:C563734","OMIM:609334","UMLS:C1836305","MEDGEN:322886"],"synonyms":[{"name":"chromosome 18 pericentric inversion","type":"exact"}],"termid":"MONDO:0012255","xrefs":{"Monarch":{"xref_id":"0012255"}}}


id: PBO:0017893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation dependent mannose-6-phosphate cargo receptor Mrl1 (predicted)","termid":"PBO:0017893"}


id: GO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving galactose that modulates the frequency, rate or extent or transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of transcription by galactose","termid":"GO:0000409"}


id: PBO:0072822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 15","termid":"PBO:0072822"}


id: GO:1904262
data:
  {"annotated_genes":["SJAG_01184","SJAG_00169","SJAG_01983","SJAG_00824","SJAG_03089","SJAG_03799","SJAG_05346","SJAG_02231","SJAG_02765","SJAG_03486","SJAG_00991","SJAG_03355","SJAG_03072","SJAG_04910","SJAG_01142","SJAG_03501","SJAG_02389","SJAG_03678","SJAG_04249","SJAG_03974","SJAG_00209","SJAG_00875","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62863,75324,75431,81738,89852,95190,97982,100772,101472,103370,104933,107072,109099,111237,111645,115148,115972,116576,118132,118488,119053,120057,120250],"is_not":false,"summary":null,"term":"GO:1904262"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GOC:TermGenie","PMID:25366275","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of TOR signaling","termid":"GO:0032007"},{"relation_name":"is_a","term_name":"regulation of TORC1 signaling","termid":"GO:1903432"},{"relation_name":"negatively_regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02389":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03799":null,"SJAG_03974":null,"SJAG_04249":null,"SJAG_04910":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"down regulation of TORC1 signal transduction","type":"exact"},{"name":"down regulation of TORC1 signaling","type":"exact"},{"name":"down-regulation of TORC1 signal transduction","type":"exact"},{"name":"down-regulation of TORC1 signaling","type":"exact"},{"name":"downregulation of TORC1 signal transduction","type":"exact"},{"name":"downregulation of TORC1 signaling","type":"exact"},{"name":"inhibition of TORC1 signal transduction","type":"narrow"},{"name":"inhibition of TORC1 signaling","type":"narrow"},{"name":"negative regulation of TORC1 signal transduction","type":"exact"}],"termid":"GO:1904262","terms_by_termid":{"GO:1904262":null}}


id: PBO:0017778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc3","termid":"PBO:0017778"}


id: GO:0010222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the stem of vascular plants.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem vascular tissue pattern formation","termid":"GO:0010222"}


id: GO:1903642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of recombination hotspot binding.","definition_xrefs":["PMID:19436749","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of recombination hotspot binding (obsolete GO:1903642)","synonyms":[{"name":"regulation of DNA binding, recombination hotspot","type":"exact"}],"termid":"GO:1903642"}


id: PBO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase Lag1","termid":"PBO:0000764"}


id: GO:0009909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of flower development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of shoot system development","termid":"GO:0048831"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of flower development","termid":"GO:0009909"}


id: SO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA_thermometer is a cis element in the 5' end of an mRNA that can change its secondary structure in response to temperature and coordinate temperature-dependent gene expression.","definition_xrefs":["PMID:22421878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_thermometer","secondary_identifiers":["https://en.wikipedia.org/wiki/RNA_thermometer"],"synonyms":[{"name":"RNA thermometer","type":"exact"},{"name":"RNA thermoregulator","type":"exact"},{"name":"RNAT","type":"exact"},{"name":"thermoregulator","type":"exact"}],"termid":"SO:0002168"}


id: GO:1900954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 18-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of 18-methylnonadec-1-ene metabolic process","termid":"GO:1900953"},{"relation_name":"negatively_regulates","term_name":"18-methylnonadec-1-ene metabolic process","termid":"GO:1900880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 18-methylnonadec-1-ene metabolic process","synonyms":[{"name":"down regulation of 18-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene metabolism","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene metabolism","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene metabolism","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene metabolic process","type":"narrow"},{"name":"inhibition of 18-methylnonadec-1-ene metabolism","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900954"}


id: MONDO:0013342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 48 (SPG48) is a form of hereditary spastic paraplegia usually characterized by a pure phenotype of a slowly progressive spastic paraplegia associated with urinary incontinence with an onset in mid- to late-adulthood. A complex phenotype, with the additional findings of cognitive impairment, sensorimotor polyneuropathy, ataxia and parkinsonism, as well as thin corpus callosum and white matter lesions (seen on magnetic resonance imaging), has also been reported.","definition_xrefs":["Orphanet:306511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"},{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0002561"],"is_obsolete":false,"name":"hereditary spastic paraplegia 48","secondary_identifiers":["SCTID:763367009","UMLS:C3150901","DOID:0110800","OMIM:613647","GARD:17378","MEDGEN:462251"],"synonyms":[{"name":"AP5Z1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG48","type":"exact"},{"name":"autosomal recessive spastic paraplegia 48","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 48","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in AP5Z1","type":"exact"},{"name":"hereditary spastic paraplegia type 48","type":"exact"},{"name":"spastic paraplegia 48, autosomal recessive","type":"related"}],"termid":"MONDO:0013342","xrefs":{"Monarch":{"xref_id":"0013342"}}}


