# terms

id: PBO:0044715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 2 (pseudogene)","termid":"PBO:0044715"}


id: GO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal dynein intermediate chain (obsolete GO:0001684)","synonyms":[{"name":"axonemal dynein intermediate chain","type":"exact"}],"termid":"GO:0001684"}


id: PBO:0064100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 2","termid":"PBO:0064100"}


id: MONDO:0975799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain malformation renal syndrome","secondary_identifiers":["OMIM:620943"],"termid":"MONDO:0975799","xrefs":{"Monarch":{"xref_id":"0975799"}}}


id: MONDO:0800174
data:
  {"annotated_genes":["SJAG_01013","SJAG_01433"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030334"},{"annotations":[89192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032742"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing encephalitis, acute, infection-induced.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01433":null},"genotype_count":0,"is_obsolete":false,"name":"encephalitis, acute, infection-induced, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800174","terms_by_termid":{"MONDO:0030334":null,"MONDO:0032742":null},"xrefs":{"Monarch":{"xref_id":"0800174"}}}


id: PBO:0045045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf like acrosomal protein 1","termid":"PBO:0045045"}


id: PBO:0056360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 3","termid":"PBO:0056360"}


id: GO:1903954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization.","definition_xrefs":["GOC:TermGenie","PMID:25281747","GOC:nc","GO_REF:0000059","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization (obsolete GO:1903954)","synonyms":[{"name":"activation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"narrow"},{"name":"positive regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"}],"termid":"GO:1903954"}


id: PBO:0068783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 20, pseudogene","termid":"PBO:0068783"}


id: MONDO:0004126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the thyroid gland. This category includes Hashimoto thyroiditis, Riedel thyroiditis, acute thyroiditis, subacute thyroiditis, and radiation-induced thyroiditis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroiditis","secondary_identifiers":["ICD9:245.9","DOID:7166","UMLS:C0040147","icd11.foundation:587793334","MEDGEN:21548","MESH:D013966","SCTID:82119001","HP:0100646","NCIT:C26894","ICD9:245"],"synonyms":[{"name":"inflammation of thyroid gland","type":"exact"},{"name":"thyroid gland inflammation","type":"exact"},{"name":"thyroiditis","type":"exact"},{"name":"thyroiditis (disease)","type":"exact"}],"termid":"MONDO:0004126","xrefs":{"Monarch":{"xref_id":"0004126"}}}


id: PBO:0057361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ae-1","termid":"PBO:0057361"}


id: PBO:0060470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAMPT antisense RNA 1","termid":"PBO:0060470"}


id: PR:Q9P7J3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An EKC/KEOPS complex subunit TPRKB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit cgi121 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.12","secondary_identifiers":["UniProtKB:Q9P7J3"],"synonyms":[{"name":"SPCC24B10.12","type":"related"},{"name":"Spom972h-TPRKB","type":"exact"}],"termid":"PR:Q9P7J3"}


id: MONDO:0859335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 15","secondary_identifiers":["DOID:0081347","UMLS:C5774273","MEDGEN:1824046","OMIM:620161"],"termid":"MONDO:0859335","xrefs":{"Monarch":{"xref_id":"0859335"}}}


id: GO:0008829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dCTP + H2O = dUTP + NH3.","definition_xrefs":["EC:3.5.4.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"dCTP deaminase activity","secondary_identifiers":["RHEA:22680","Reactome:R-HSA-180632","MetaCyc:DCTP-DEAM-RXN"],"synonyms":[{"name":"5-methyl-dCTP deaminase activity","type":"related"},{"name":"dCTP aminohydrolase activity","type":"related"},{"name":"deoxycytidine triphosphate deaminase activity","type":"related"}],"termid":"GO:0008829"}


id: PBO:0056419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1","termid":"PBO:0056419"}


id: PBO:0057182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 337","termid":"PBO:0057182"}


id: FYPO:0006587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is decreased.","definition_xrefs":["PomBase:mah","PMID:29134248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip membrane","termid":"FYPO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to shmoo tip membrane","synonyms":[{"name":"decreased protein localisation to shmoo tip membrane","type":"exact"},{"name":"decreased protein localization to mating projection tip membrane","type":"exact"},{"name":"decreased protein localization to plasma membrane at shmoo tip","type":"exact"},{"name":"decreased protein localization to shmoo membrane fusion domain","type":"exact"},{"name":"decreased protein localization to shmoo projection membrane","type":"related"},{"name":"reduced protein localization to shmoo tip membrane","type":"exact"}],"termid":"FYPO:0006587"}


id: GO:1905169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to phagocytic vesicle.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to phagocytic vesicle","termid":"GO:1905161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to phagocytic vesicle","synonyms":[{"name":"regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"regulation of protein localisation to phagosome","type":"exact"},{"name":"regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"regulation of protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905169"}


id: PBO:0068520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 115, pseudogene","termid":"PBO:0068520"}


id: PBO:0038373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_exposure_route","termid":"PBO:0038373"}


id: PBO:0067272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 350, pseudogene","termid":"PBO:0067272"}


id: PR:Q10252
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 4-hydroxybenzoate polyprenyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11048:SF2","PRO:DNx","OMA:SCHPO00452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxybenzoate polyprenyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.04c","secondary_identifiers":["UniProtKB:Q10252"],"synonyms":[{"name":"4-HB polyprenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"4-hydroxybenzoate decaprenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PHB:PPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PHB:polyprenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COQ2","type":"exact"},{"name":"p-hydroxybenzoate polyprenyl diphosphate transferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"para-hydroxybenzoate--polyprenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10252"}


id: FYPO:0005037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 5 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["GO:0071620","PomBase:mah","PMID:22144909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen starvation","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen deprivation","type":"exact"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 5 residues during nitrogen depletion","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005037"}


id: PR:Q9UUB8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NFU1 iron-sulfur cluster scaffold, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02733","PRO:DNx","PANTHER:PTHR11178:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NifU-like protein C1709.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.19c","secondary_identifiers":["UniProtKB:Q9UUB8"],"synonyms":[{"name":"Spom972h-NFU1","type":"exact"}],"termid":"PR:Q9UUB8"}


id: PR:O42979
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHO85 cyclin-like protein psl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.10","synonyms":[{"name":"Spom972h-psl1","type":"exact"}],"termid":"PR:O42979"}


id: MONDO:0018475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"PRKAR1B-related neurodegenerative dementia with intermediate filaments","secondary_identifiers":["GARD:21738","UMLS:C4751505","MEDGEN:1654800","Orphanet:412066"],"termid":"MONDO:0018475","xrefs":{"Monarch":{"xref_id":"0018475"}}}


id: MONDO:0006699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Presence or formation of gallstones in the common bile duct.","definition_xrefs":["MESH:D042883"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"excluded_subClassOf","term_name":"gallbladder disorder","termid":"MONDO:0005281"},{"relation_name":"is_a","term_name":"common bile duct disorder","termid":"MONDO:0002886"},{"relation_name":"is_a","term_name":"gallstones","termid":"MONDO:0005346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"choledocholithiasis","secondary_identifiers":["EFO:1000865","MedDRA:10049891","MEDGEN:148784","UMLS:C0701818","DOID:11755"],"termid":"MONDO:0006699","xrefs":{"Monarch":{"xref_id":"0006699"}}}


id: GO:0050146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleotide + a 2'-deoxynucleoside = a nucleoside + a 2'-deoxynucleoside 5'-monophosphate.","definition_xrefs":["MetaCyc:NUCLEOSIDE-PHOSPHOTRANSFERASE-RXN","EC:2.7.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nucleoside phosphotransferase activity","secondary_identifiers":["Reactome:R-HSA-9754916","RHEA:19961","Reactome:R-HSA-2162066"],"synonyms":[{"name":"nonspecific nucleoside phosphotransferase activity","type":"related"},{"name":"nucleotide:2'-nucleoside 5'-phosphotransferase activity","type":"related"},{"name":"nucleotide:3'-deoxynucleoside 5'-phosphotransferase activity","type":"related"},{"name":"nucleotide:nucleoside 5'-phosphotransferase activity","type":"related"}],"termid":"GO:0050146"}


id: FYPO:0004655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to cell division site","synonyms":[{"name":"increased protein localisation to cell division site","type":"exact"},{"name":"increased protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"increased protein localization to cell division site during vegetative growth","type":"exact"},{"name":"increased protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0004655"}


id: PBO:0044409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily F member 2, pseudogene","termid":"PBO:0044409"}


id: PBO:0113396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulator of 1,3-beta-glucan biosynthesis; interacts with the catalytic (Fks1p and Gsc2p) and regulatory subunits (Rho1p) of 1,3-beta-glucan synthase; has a negative genetic interaction with RHO1; localizes to the cell periphery during early G1, to the bud tip in late G1, to the bud at S/G2, to the periphery of the bud at metaphase and at the bud neck during telophase; periodically expressed during the cell cycle; protein abundance increases in response to DNA replication stress","termid":"PBO:0113396"}


id: MONDO:0016264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatitis caused by autoantibodies. Drugs, infections, and toxins may trigger the production of the autoantibodies against the liver parenchyma.","definition_xrefs":["NCIT:C27029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"autoimmune disorder of exocrine system","termid":"MONDO:0000586"},{"relation_name":"is_a","term_name":"autoimmune disorder of gastrointestinal tract","termid":"MONDO:0000588"},{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"autoimmune hepatitis","secondary_identifiers":["MEDGEN:1666753","NANDO:1200441","ICD10CM:K75.4","DOID:2048","MedDRA:10003827","NANDO:2100264","NORD:1897","Orphanet:2137","GARD:5871","MESH:D019693","EFO:0005676","NANDO:1200442","ICD9:571.42","UMLS:C4721555","icd11.foundation:1235727122","SCTID:408335007"],"synonyms":[{"name":"AIH","type":"related"},{"name":"autoimmune chronic active hepatitis","type":"narrow"},{"name":"autoimmune chronic hepatitis","type":"related"},{"name":"autoimmune hepatitis","type":"exact"},{"name":"autoimmune hepatitis with centrilobular necrosis","type":"narrow"},{"name":"autoimmune liver disease","type":"broad"},{"name":"chronic autoimmune hepatitis","type":"narrow"}],"termid":"MONDO:0016264","xrefs":{"Monarch":{"xref_id":"0016264"}}}


id: PBO:0060221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein 4","termid":"PBO:0060221"}


id: PBO:0034226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_immediately_upstream_of_sequence_of","termid":"PBO:0034226"}


id: PBO:0030473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_glutamine_level","termid":"PBO:0030473"}


id: PATO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Presence of long chain aliphatic lipids on the surface of an organism.","definition_xrefs":["PATOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"waxiness","termid":"PATO:0002381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waxy","termid":"PATO:0002384"}


id: GO:0071686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The elongated nucleus which forms during the rapid oscillatory movement at meiotic prophase; characterized in Schizosaccharomyces pombe.","definition_xrefs":["GOC:vw","PMID:15030757"],"gene_count":0,"genotype_count":0,"name":"obsolete horsetail nucleus (obsolete GO:0071686)","termid":"GO:0071686"}


id: PBO:0001429
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lap-Emerin-Man domain protein","termid":"PBO:0001429"}


id: MONDO:0037745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A soft tissue tumor of uncertain lineage characterized by the presence of neoplastic spindle-shaped to round cells in a fibromyxoid stroma. Metaplastic bone formation may or may not be present.","definition_xrefs":["NCIT:C66760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromyxoid tumor","secondary_identifiers":["UMLS:C0205766","MEDGEN:60023","ICDO:8811/0"],"synonyms":[{"name":"fibromyxoid neoplasm","type":"exact"},{"name":"fibromyxoid tumor","type":"exact"},{"name":"fibromyxoma","type":"exact"},{"name":"fibromyxoma, benign","type":"exact"}],"termid":"MONDO:0037745","xrefs":{"Monarch":{"xref_id":"0037745"}}}


id: PBO:0071796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p40 pseudogene 2","termid":"PBO:0071796"}


id: PBO:0065806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB2B, member RAS oncogene family","termid":"PBO:0065806"}


id: PBO:0048291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin receptor 3","termid":"PBO:0048291"}


id: MONDO:0044987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the face.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete face disorder (obsolete MONDO:0044987)","secondary_identifiers":["SCTID:118930001"],"synonyms":[{"name":"disease of face","type":"exact"},{"name":"disease or disorder of face","type":"exact"},{"name":"disorder of face","type":"exact"},{"name":"face disease","type":"exact"},{"name":"face disease or disorder","type":"exact"}],"termid":"MONDO:0044987","xrefs":{"Monarch":{"xref_id":"0044987"}}}


id: PBO:0069078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 325, pseudogene","termid":"PBO:0069078"}


id: GO:0102411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-3-glucoside + UDP-alpha-D-glucose(2-) = quercetin 3,4'-O-diglucoside + UDP(3-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin-3,4'-O-glucosyltransferase activity (obsolete GO:0102411)","termid":"GO:0102411"}


id: MONDO:0018263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A drug-related embryofetopathy that can occur when an embryo/fetus is exposed to carbamazepine and that is characterized by facial dysmorphism, with some similarities to that seen in fetal valproate syndrome (see this term), such as epicanthal folds, upward slanting palpebral fissures, short nose, micrognathia and malar hypoplasia, as well as nail dysplasia and major anomalies including cleft lip/palate, neural tube defects and cardiac anomalies. In utero exposure to carbamazepine, in combination with valproate, has been associated with significant developmental delay (particularly affecting verbal intelligence) and a high rate of congenital anomalies.","definition_xrefs":["Orphanet:370076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal carbamazepine syndrome","secondary_identifiers":["GARD:21595","MEDGEN:609479","SCTID:254249002","UMLS:C0432370","ICD9:760.8"],"termid":"MONDO:0018263","xrefs":{"Monarch":{"xref_id":"0018263"}}}


id: PBO:0084284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for ER to Golgi transport; localized to the Golgi, the ER, and COPII vesicles; interacts with Yip1p and Yif1p","termid":"PBO:0084284"}


id: GO:0000493
data:
  {"annotated_genes":["SJAG_03125","SJAG_03551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78449,82172],"is_not":false,"summary":null,"term":"GO:0000493"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and a box H/ACA snoRNA to form a box H/ACA small nucleolar ribonucleoprotein (snoRNP) complex.","definition_xrefs":["GOC:krc","PMID:12515383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small nucleolar ribonucleoprotein complex assembly","termid":"GO:0000491"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03125":null,"SJAG_03551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"box H/ACA snoRNP assembly","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"box H/ACA small nucleolar ribonucleoprotein complex assembly","type":"exact"}],"termid":"GO:0000493","terms_by_termid":{"GO:0000493":null}}


id: GO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by a carbon dioxide stimulus is received and converted to a molecular signal by the vasomotor center of the central nervous system.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbon dioxide","termid":"GO:0003031"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by ischemic conditions","termid":"GO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of carbon dioxide by vasomotor center","termid":"GO:0002013"}


id: FYPO:0002003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene. An RNA polymerase II proximal promoter is a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II.","definition_xrefs":["GO:0000978","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-stranded DNA binding","termid":"FYPO:0007543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000653"],"is_obsolete":false,"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding","synonyms":[{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding abolished","type":"exact"},{"name":"abolished transcription factor binding to promoter region","type":"related"}],"termid":"FYPO:0002003"}


id: MONDO:0001357
data:
  {"annotated_genes":["SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","definition":"Anemia caused by the reduction of hemoglobin in relation to the red cell volume. As a result, the red cells have an area of central pallor which is increased in size. The leading cause is iron deficiency.","definition_xrefs":["NCIT:C34380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hypochromic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:8065","SCTID:44452003","DOID:11759","HP:0001931","UMLS:C0002884"],"synonyms":[{"name":"anaemia hypochromic","type":"exact"},{"name":"anemia hypochromic","type":"exact"},{"name":"hypochromic anaemia (disease)","type":"exact"},{"name":"hypochromic anemia","type":"exact"},{"name":"hypochromic anemia (disease)","type":"exact"}],"termid":"MONDO:0001357","terms_by_termid":{"MONDO:0008787":null},"xrefs":{"Monarch":{"xref_id":"0001357"}}}


id: PBO:0027995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitotic_G1_phase","termid":"PBO:0027995"}


id: PBO:0003503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6,7-dimethyl-8-ribityllumazine synthase (predicted)","termid":"PBO:0003503"}


id: FYPO:0001603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal level of substance in vacuole","synonyms":[{"name":"normal level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"normal level of substance in vacuole during vegetative growth","type":"exact"},{"name":"normal vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001603"}


id: PBO:0036259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylformylglycinamidine synthase Ade3","termid":"PBO:0036259"}


id: PBO:0085366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosylpyrophosphate amidotransferase (PRPPAT); catalyzes first step of the 'de novo' purine nucleotide biosynthetic pathway; also known as amidophosphoribosyltransferase","termid":"PBO:0085366"}


id: MONDO:0013066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 3","secondary_identifiers":["GARD:15598","MEDGEN:483746","NANDO:1200405","OMIM:612965","DOID:0111772","UMLS:C3489793"],"synonyms":[{"name":"46,XY SEX reversal 3","type":"related"},{"name":"46,XY Sex reversal type 3","type":"exact"},{"name":"46,XY Sex reversal, partial or complete, Nr5A1-related","type":"related"},{"name":"46,XY gonadal dysgenesis, partial or complete, with or without adrenal failure","type":"related"},{"name":"46,XY sex reversal 3","type":"exact"},{"name":"46XY sex reversal 3","type":"exact"},{"name":"SRXY3","type":"related"},{"name":"Sex reversal, XY, with or without adrenal failure","type":"related"},{"name":"disorder of Sex development, 46,XY, Nr5A1-related","type":"related"}],"termid":"MONDO:0013066","xrefs":{"Monarch":{"xref_id":"0013066"}}}


id: GO:0050781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trichlorophenol + 2 H+ + 2 e- = 2,4-dichlorophenol + HCl.","definition_xrefs":["PMID:12697029","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ortho-trichlorophenol reductive dehalogenase activity","synonyms":[{"name":"2,4,6-TCP reductive dehalogenase activity","type":"exact"},{"name":"2,4,6-trichlorophenol reductive dehalogenase activity","type":"exact"}],"termid":"GO:0050781"}


id: MONDO:0956997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An IDH-mutant, and 1p/19q-codeleted oligodendroglioma that is characterized as grade 3 tumors associated with a more rapid growth. Grade 3 tumors appear to have abnormalities on chromosomes 9 or 10, along with unusual amounts of growth factors and proteins, which are thought to contribute to the more rapid growth of these gliomas.","definition_xrefs":["DOID:0081282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IDH-mutant and 1p/19q-codeleted oligodendroglioma","termid":"MONDO:0859592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oligodendroglioma, IDH-mutant and 1p/19q-codeleted, grade 3","termid":"MONDO:0956997","xrefs":{"Monarch":{"xref_id":"0956997"}}}


id: GO:2000650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sodium ion transmembrane transporter activity (obsolete GO:2000650)","synonyms":[{"name":"negative regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000650"}


id: MONDO:0001315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinical syndrome characterized by palpitation, shortness of breath, labored breathing, subjective complaints of effort and discomfort, all following slight physical exertion. Other symptoms may be dizziness, tremulousness, sweating, and insomnia. Neurocirculatory asthenia is most typically seen as a form of anxiety disorder.","definition_xrefs":["MESH:D009449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatoform disorder","termid":"MONDO:0003117"},{"relation_name":"is_a","term_name":"anxiety disorder","termid":"MONDO:0005618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurocirculatory asthenia","secondary_identifiers":["SCTID:191962000","UMLS:C1535893","ICD9:306.2","MEDGEN:283928","DOID:11569"],"synonyms":[{"name":"Da Costa's syndrome","type":"exact"},{"name":"Krishaber's disease","type":"exact"},{"name":"cardiovascular malfunction arising from mental factors","type":"exact"},{"name":"cardiovascular neurosis","type":"exact"}],"termid":"MONDO:0001315","xrefs":{"Monarch":{"xref_id":"0001315"}}}


id: MONDO:0011418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"dyslexia","termid":"MONDO:0005489"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia, susceptibility to, 3","secondary_identifiers":["UMLS:C1858662","MEDGEN:388113","OMIM:604254"],"synonyms":[{"name":"DYX3","type":"exact"},{"name":"dyslexia, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0011418","xrefs":{"Monarch":{"xref_id":"0011418"}}}


id: GO:0039507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host protein.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host molecular function (obsolete GO:0039507)","synonyms":[{"name":"down regulation by virus of host protein function","type":"exact"},{"name":"down-regulation by virus of host protein function","type":"exact"},{"name":"inhibition by virus of host protein function","type":"narrow"},{"name":"inhibition of host protein function","type":"narrow"},{"name":"negative regulation by virus of host molecular function","type":"exact"},{"name":"negative regulation by virus of host protein function","type":"exact"}],"termid":"GO:0039507"}


id: MONDO:0032739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 36","secondary_identifiers":["UMLS:C5193086","DOID:0111921","MEDGEN:1678385","OMIM:618420"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 36","type":"related"},{"name":"SPGF36","type":"related"}],"termid":"MONDO:0032739","xrefs":{"Monarch":{"xref_id":"0032739"}}}


id: MONDO:0043071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"aniridia","termid":"MONDO:0019172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Zazam Sheriff Phillips syndrome","secondary_identifiers":["MEDGEN:419768","MESH:C536723","UMLS:C2931300"],"synonyms":[{"name":"aniridia, ectopia lentis, abnormal upper incisors and intellectual disability","type":"related"},{"name":"aniridia, ectopia lentis, abnormal upper incisors and mental retardation","type":"related"},{"name":"aniridia, lens luxation, intellectual disability","type":"related"},{"name":"aniridia, lens luxation, mental retardation","type":"related"}],"termid":"MONDO:0043071","xrefs":{"Monarch":{"xref_id":"0043071"}}}


id: GO:0038053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with estrogen and transmitting the signal to the transcriptional machinery by binding to an RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. For example, estrogen-bound receptors can bind to transcription factor complexes to regulate transcription of genes whose promoters do not contain estrogen response elements.","definition_xrefs":["PMID:17615392","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, estrogen-activated RNA polymerase II transcription factor binding (obsolete GO:0038053)","synonyms":[{"name":"estrogen nuclear receptor activity","type":"broad"},{"name":"estrogen-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0038053"}


id: PBO:0116320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase delta subunit (central stalk) Atp16","termid":"PBO:0116320"}


id: PBO:0055497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2931","termid":"PBO:0055497"}


id: GO:0003183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the mitral valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"},{"relation_name":"part_of","term_name":"mitral valve development","termid":"GO:0003174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitral valve morphogenesis","termid":"GO:0003183"}


id: FYPO:0003488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated cell during cellular response to ionizing radiation (obsolete FYPO:0003488)","synonyms":[{"name":"elongated cell during cellular response to IR","type":"exact"},{"name":"elongated cell during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"elongated cell during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"elongated in response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003488"}


id: PBO:0059378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 3","termid":"PBO:0059378"}


id: MONDO:0017525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly of a triphalangeal thumb","termid":"MONDO:0008270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of a triphalangeal thumb, unilateral","secondary_identifiers":["icd11.foundation:71240015","Orphanet:295148"],"synonyms":[{"name":"preaxial polydactyly type 2, unilateral","type":"exact"},{"name":"unilateral PPD2","type":"exact"}],"termid":"MONDO:0017525","xrefs":{"Monarch":{"xref_id":"0017525"}}}


id: MONDO:0012050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"major depressive disorder","termid":"MONDO:0002009"},{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major depressive disorder 1","secondary_identifiers":["MEDGEN:325293","OMIM:608520","MESH:C563919","UMLS:C1837929"],"synonyms":[{"name":"MDD1","type":"exact"},{"name":"major depressive disorder 1","type":"exact"},{"name":"major depressive disorder type 1","type":"exact"},{"name":"unipolar depression 1","type":"related"}],"termid":"MONDO:0012050","xrefs":{"Monarch":{"xref_id":"0012050"}}}


id: GO:1903086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sinapate ester biosynthesis.","definition_xrefs":["PMID:11080161","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of sinapate ester biosynthetic process","termid":"GO:1903085"},{"relation_name":"negatively_regulates","term_name":"sinapate ester biosynthetic process","termid":"GO:0033525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of sinapate ester biosynthetic process","synonyms":[{"name":"down regulation of sinapate ester anabolism","type":"exact"},{"name":"down regulation of sinapate ester biosynthesis","type":"exact"},{"name":"down regulation of sinapate ester biosynthetic process","type":"exact"},{"name":"down regulation of sinapate ester formation","type":"exact"},{"name":"down regulation of sinapate ester synthesis","type":"exact"},{"name":"down-regulation of sinapate ester anabolism","type":"exact"},{"name":"down-regulation of sinapate ester biosynthesis","type":"exact"},{"name":"down-regulation of sinapate ester biosynthetic process","type":"exact"},{"name":"down-regulation of sinapate ester formation","type":"exact"},{"name":"down-regulation of sinapate ester synthesis","type":"exact"},{"name":"downregulation of sinapate ester anabolism","type":"exact"},{"name":"downregulation of sinapate ester biosynthesis","type":"exact"},{"name":"downregulation of sinapate ester biosynthetic process","type":"exact"},{"name":"downregulation of sinapate ester formation","type":"exact"},{"name":"downregulation of sinapate ester synthesis","type":"exact"},{"name":"inhibition of sinapate ester anabolism","type":"narrow"},{"name":"inhibition of sinapate ester biosynthesis","type":"narrow"},{"name":"inhibition of sinapate ester biosynthetic process","type":"narrow"},{"name":"inhibition of sinapate ester formation","type":"narrow"},{"name":"inhibition of sinapate ester synthesis","type":"narrow"},{"name":"negative regulation of sinapate ester anabolism","type":"exact"},{"name":"negative regulation of sinapate ester biosynthesis","type":"exact"},{"name":"negative regulation of sinapate ester formation","type":"exact"},{"name":"negative regulation of sinapate ester synthesis","type":"exact"}],"termid":"GO:1903086"}


id: GO:0047492
data:
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id: GO:0000785
data:
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id: PBO:0085217
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id: GO:1901436
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id: GO:0008820
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id: GO:0070076
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id: PBO:0089770
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id: PBO:0067382
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id: PBO:0029698
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id: GO:0016896
data:
  {"annotated_genes":["SJAG_02993","SJAG_00081","SJAG_01822","SJAG_02540","SJAG_00966","SJAG_04824","SJAG_01836","SJAG_04153","SJAG_01798","SJAG_00841","SJAG_04407","SJAG_04006","SJAG_03876","SJAG_06586","SJAG_04519","SJAG_04587","SJAG_00401","SJAG_04084","SJAG_04818","SJAG_03276","SJAG_04369","SJAG_03132","SJAG_03745","SJAG_02275"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81521,71688,91824,100841,72384,76370,81265,67854,63756,104005,105593,106339,107209,120340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[75275,79698,71749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[116431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[76022,109739,118612,80604,79252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[70121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exonuclease activity","termid":"GO:0004532"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00401":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_02275":null,"SJAG_02540":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03276":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04519":null,"SJAG_04587":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0004527","GO:0003824","GO:0140098","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"RNA exonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.13.-","Reactome:R-HSA-429860"],"synonyms":[{"name":"exoribonuclease activity, producing 5' phosphomonoesters","type":"exact"},{"name":"exoribonuclease activity, producing 5'-phosphomonoesters","type":"exact"}],"termid":"GO:0016896","terms_by_termid":{"GO:0000175":null,"GO:0004534":null,"GO:0004535":null,"GO:0008859":null,"GO:1990838":null}}


id: GO:0031582
data:
  {"annotated_genes":["SJAG_03997","SJAG_00247","SJAG_04855","SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101260,104194,117026],"is_not":false,"summary":null,"term":"GO:0031582"},{"annotations":[105148],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"}]},"cv_name":"biological_process","definition":"A process that impedes the progress of the DNA replication fork at natural replication fork pausing sites within the eukaryotic rDNA repeat spacer.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of rDNA","termid":"GO:0043007"},{"relation_name":"is_a","term_name":"replication fork arrest","termid":"GO:0043111"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"replication fork arrest at rDNA repeats","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"replication fork arrest at ribosomal DNA repeats","type":"exact"},{"name":"replication fork blocking at rDNA repeats","type":"exact"}],"termid":"GO:0031582","terms_by_termid":{"GO:0031582":null,"GO:1902681":null}}


id: GO:0030947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of vascular endothelial growth factor receptor signaling pathway","synonyms":[{"name":"regulation of VEGF receptor signaling pathway","type":"exact"},{"name":"regulation of VEGF receptor signalling pathway","type":"exact"},{"name":"regulation of vascular endothelial growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0030947"}


id: PBO:0087111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal stalk protein P1 alpha; involved in the interaction between translational elongation factors and the ribosome; free (non-ribosomal) P1 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; accumulation of P1 in the cytoplasm is regulated by phosphorylation and interaction with the P2 stalk component","termid":"PBO:0087111"}


id: PBO:0088145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088145"}


id: PBO:0038345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_active_in","termid":"PBO:0038345"}


id: GO:1901816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-zeacarotene.","definition_xrefs":["UniPathway:UPA00805","GOC:TermGenie","GOC:yaf","PMID:3710717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-zeacarotene metabolic process","synonyms":[{"name":"beta-zeacarotene metabolism","type":"exact"}],"termid":"GO:1901816"}


id: GO:0070902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in a mitochondrial tRNA molecule.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthesis","termid":"GO:0031119"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0140053","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tRNA pseudouridine synthesis","termid":"GO:0070902"}


id: GO:0035752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the pH of the lysosomal lumen, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:rph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lysosomal lumen pH","termid":"GO:0035751"},{"relation_name":"is_a","term_name":"intracellular pH elevation","termid":"GO:0051454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysosomal lumen pH elevation","synonyms":[{"name":"lysosome pH elevation","type":"exact"}],"termid":"GO:0035752"}


id: MONDO:0001333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Patau syndrome (obsolete MONDO:0001333)","termid":"MONDO:0001333","xrefs":{"Monarch":{"xref_id":"0001333"}}}


id: SO:0001650
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which does not cause a disruption of the translational reading frame.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_altering_variant","termid":"SO:0001818"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe_variant","synonyms":[{"name":"ANNOVAR:nonframeshift block substitution","type":"related"},{"name":"ANNOVAR:nonframeshift substitution","type":"related"},{"name":"VAAST:inframe_variant","type":"exact"},{"name":"cds-indel","type":"exact"},{"name":"inframe variant","type":"exact"}],"termid":"SO:0001650"}


id: GO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an animal in response to touch.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thigmotaxis","synonyms":[{"name":"stereotaxis","type":"exact"},{"name":"taxis in response to mechanical stimulus","type":"broad"},{"name":"taxis in response to touch stimulus","type":"exact"}],"termid":"GO:0001966"}


id: MONDO:0004758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized defect in the visual field bordered by an area of normal vision. This occurs with a variety of eye diseases (e.g., retinal diseases and glaucoma); optic nerve diseases, and other conditions.","definition_xrefs":["MESH:D012607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"scotoma","secondary_identifiers":["ICD9:368.45","HP:0000575","DOID:9335","UMLS:C0036454","ICD9:368.42","ICD9:368.44","MEDGEN:19902","ICD9:368.43"],"synonyms":[{"name":"blind spot area scotoma","type":"exact"},{"name":"enlarged angioscotoma","type":"exact"},{"name":"enlarged blind spot","type":"exact"},{"name":"enlarged paracaecal scotoma","type":"exact"},{"name":"generalised visual field contraction or constriction","type":"exact"},{"name":"generalized visual field contraction or constriction","type":"exact"},{"name":"scotoma","type":"exact"},{"name":"scotoma (disease)","type":"exact"},{"name":"scotoma of blind spot area","type":"exact"},{"name":"sector or arcuate visual field defects","type":"exact"}],"termid":"MONDO:0004758","xrefs":{"Monarch":{"xref_id":"0004758"}}}


id: GO:0034749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the Scribble protein (a cell polarity determinant) and the tumor suppressor protein adenomatous polyposis coli (APC); may be involved in the control of cell proliferation.","definition_xrefs":["PMID:16611247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Scrib-APC complex","synonyms":[{"name":"hScrib-APC complex","type":"narrow"}],"termid":"GO:0034749"}


id: GO:1902034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell proliferation.","definition_xrefs":["PMID:23403623","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell proliferation","termid":"GO:1902033"},{"relation_name":"is_a","term_name":"negative regulation of hemopoiesis","termid":"GO:1903707"},{"relation_name":"is_a","term_name":"negative regulation of stem cell proliferation","termid":"GO:2000647"},{"relation_name":"negatively_regulates","term_name":"hematopoietic stem cell proliferation","termid":"GO:0071425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic stem cell proliferation","synonyms":[{"name":"down regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"down regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"down-regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"down-regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"downregulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"downregulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"inhibition of hematopoietic stem cell proliferation","type":"narrow"},{"name":"inhibition of hemopoietic stem cell proliferation","type":"narrow"},{"name":"negative regulation of hemopoietic stem cell proliferation","type":"exact"}],"termid":"GO:1902034"}


id: MONDO:0006386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, serous adenocarcinoma that diffusely involves the pelvic peritoneum seen predominantly in elderly postmenopausal women. Exclusion of serous carcinoma arising from the ovary and fimbrial end of fallopian tube is required to diagnose the above entity.","definition_xrefs":["doi:10.4103/2278-0513.157944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal serous adenocarcinoma","termid":"MONDO:0003195"},{"relation_name":"is_a","term_name":"primary peritoneal carcinoma","termid":"MONDO:0015686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary peritoneal serous adenocarcinoma","secondary_identifiers":["UMLS:C1514429","EFO:1000494","NCIT:C40023","MEDGEN:269517"],"synonyms":[{"name":"primary peritoneal serous adenocarcinoma","type":"exact"}],"termid":"MONDO:0006386","xrefs":{"Monarch":{"xref_id":"0006386"}}}


id: GO:0033276
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that does not contain either a TATA-binding protein (TBP) or a TBP-like factor, but is composed of several TAFIIs and other proteins, including a histone acetyltransferase. This complex is able to nucleate transcription initiation by RNA polymerase II, can mediate transcriptional activation, and has histone acetyltransferase activity.","definition_xrefs":["PMID:10373431","PMID:9603525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"},{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"transcription factor TFTC complex","termid":"GO:0033276"}


id: MOD:01131
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dGuanosyl","termid":"MOD:01131"}


id: PBO:0046211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 4","termid":"PBO:0046211"}


id: MONDO:0013924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the BMP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta","termid":"MONDO:0019019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 13","secondary_identifiers":["GARD:15856","OMIM:614856","MEDGEN:766801","UMLS:C3553887","DOID:0110342"],"synonyms":[{"name":"BMP1 osteogenesis imperfecta","type":"exact"},{"name":"OI, type 13","type":"related"},{"name":"OI13","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in BMP1","type":"exact"},{"name":"osteogenesis imperfecta type XIII","type":"exact"},{"name":"osteogenesis imperfecta, type 13","type":"related"},{"name":"osteogenesis imperfecta, type XIII","type":"related"}],"termid":"MONDO:0013924","xrefs":{"Monarch":{"xref_id":"0013924"}}}


id: PBO:0055307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2734","termid":"PBO:0055307"}


id: PBO:0018224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med1","termid":"PBO:0018224"}


id: PBO:0064529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit G pseudogene 1","termid":"PBO:0064529"}


id: GO:0003209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cardiac atrium is generated and organized. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"cardiac atrium development","termid":"GO:0003230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac atrium morphogenesis","termid":"GO:0003209"}


id: MONDO:1010879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the CLN6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN6-related, dog","secondary_identifiers":["OMIA:001443-9615"],"synonyms":[{"name":"CLN6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 6, dog","type":"related"}],"termid":"MONDO:1010879","xrefs":{"Monarch":{"xref_id":"1010879"}}}


id: MOD:01114
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triphenylmethyl","synonyms":[{"name":"Trityl","type":"exact"},{"name":"Trt","type":"exact"}],"termid":"MOD:01114"}


id: GO:2000193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"regulation of fatty acid transport","termid":"GO:2000191"},{"relation_name":"positively_regulates","term_name":"fatty acid transport","termid":"GO:0015908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of fatty acid transport","termid":"GO:2000193"}


id: PBO:0064702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 38","termid":"PBO:0064702"}


id: PBO:0043467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNOT6L pseudogene 1","termid":"PBO:0043467"}


id: GO:0019253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthesis, dark reaction","termid":"GO:0019685"},{"relation_name":"part_of","term_name":"carbon fixation","termid":"GO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"reductive pentose-phosphate cycle","secondary_identifiers":["MetaCyc:CALVIN-PWY"],"synonyms":[{"name":"C3 photosynthesis","type":"narrow"},{"name":"Calvin cycle","type":"narrow"}],"termid":"GO:0019253"}


id: MOD:01539
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01539"}


id: PBO:0063962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase like 1","termid":"PBO:0063962"}


id: PBO:0040017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 6","termid":"PBO:0040017"}


id: PBO:0087146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding subunit of the TRAMP nuclear RNA surveillance complex; involved in nuclear RNA processing and degradation; involved in TRAMP complex assembly as a bridge between Mtr4p and Trf4p; stimulates the poly(A) polymerase activity of Pap2p in vitro; has 5 zinc knuckle motifs; AIR2 has a paralog, AIR1, that arose from the whole genome duplication; Air2p and Air1p have nonredundant roles in regulation of substrate specificity of the exosome","termid":"PBO:0087146"}


id: PBO:0061357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 17","termid":"PBO:0061357"}


id: GO:0019674
data:
  {"annotated_genes":["SJAG_03091","SJAG_02618","SJAG_03306","SJAG_01753","SJAG_02889","SJAG_00714","SJAG_04693","SJAG_02191","SJAG_00522","SJAG_02154","SJAG_03298","SJAG_01582","SJAG_01566","SJAG_01500","SJAG_03946"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58756,68131,70747],"is_not":false,"summary":null,"term":"GO:0019674"},{"annotations":[89673,113795,118562,98454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043490"},{"annotations":[76535,79445,115077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[72568,81889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[74167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[96989,96990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006735"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide adenine dinucleotide (NAD+), a coenzyme that interconverts with its reduced form, NADH, in many redox and catabolic reactions.","definition_xrefs":["PMID:28648096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00714":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_01753":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03091":null,"SJAG_03298":null,"SJAG_03306":null,"SJAG_03946":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"NAD+ metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-196807"],"synonyms":[{"name":"NAD (oxidized) metabolic process","type":"exact"},{"name":"NAD (oxidized) metabolism","type":"exact"},{"name":"NAD metabolic process","type":"exact"},{"name":"NAD metabolism","type":"exact"},{"name":"NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"oxidized NAD metabolic process","type":"exact"},{"name":"oxidized NAD metabolism","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:0019674","terms_by_termid":{"GO:0006735":null,"GO:0009435":null,"GO:0019674":null,"GO:0019677":null,"GO:0034355":null,"GO:0043490":null}}


id: MONDO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progeroid syndrome (obsolete MONDO:0000146)","termid":"MONDO:0000146","xrefs":{"Monarch":{"xref_id":"0000146"}}}


id: PBO:0084693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA-binding protein; involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation; ABF2 has a paralog, IXR1, that arose from the whole genome duplication; human homolog TFAM can complement yeast abf2 mutant, rescuing the loss-of-mitochondrial DNA phenotype","termid":"PBO:0084693"}


id: GO:0060778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the primary leaflet attains its shape. A primary leaflet is a leaflet that develops directly from the rachis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary leaflet morphogenesis","termid":"GO:0060778"}


id: GO:1904277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of wax biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:24692420","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"regulation of wax biosynthetic process","termid":"GO:1904276"},{"relation_name":"negatively_regulates","term_name":"wax biosynthetic process","termid":"GO:0010025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of wax biosynthetic process","synonyms":[{"name":"down regulation of wax anabolism","type":"exact"},{"name":"down regulation of wax biosynthesis","type":"exact"},{"name":"down regulation of wax biosynthetic process","type":"exact"},{"name":"down regulation of wax formation","type":"exact"},{"name":"down regulation of wax synthesis","type":"exact"},{"name":"down-regulation of wax anabolism","type":"exact"},{"name":"down-regulation of wax biosynthesis","type":"exact"},{"name":"down-regulation of wax biosynthetic process","type":"exact"},{"name":"down-regulation of wax formation","type":"exact"},{"name":"down-regulation of wax synthesis","type":"exact"},{"name":"downregulation of wax anabolism","type":"exact"},{"name":"downregulation of wax biosynthesis","type":"exact"},{"name":"downregulation of wax biosynthetic process","type":"exact"},{"name":"downregulation of wax formation","type":"exact"},{"name":"downregulation of wax synthesis","type":"exact"},{"name":"inhibition of wax anabolism","type":"narrow"},{"name":"inhibition of wax biosynthesis","type":"narrow"},{"name":"inhibition of wax biosynthetic process","type":"narrow"},{"name":"inhibition of wax formation","type":"narrow"},{"name":"inhibition of wax synthesis","type":"narrow"},{"name":"negative regulation of wax anabolism","type":"exact"},{"name":"negative regulation of wax biosynthesis","type":"exact"},{"name":"negative regulation of wax formation","type":"exact"},{"name":"negative regulation of wax synthesis","type":"exact"}],"termid":"GO:1904277"}


id: PBO:0066872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 172","termid":"PBO:0066872"}


id: PBO:0050450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U pseudogene 1","termid":"PBO:0050450"}


id: MONDO:0100359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with herpes simplex type 1.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes simplex infectious disease","termid":"MONDO:0004609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex type 1 infectious disease","termid":"MONDO:0100359","xrefs":{"Monarch":{"xref_id":"0100359"}}}


id: PBO:0086265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that stimulates strand exchange; stimulates strand exchange by stabilizing the binding of Rad51p to single-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; forms heterodimer with Rad55p","termid":"PBO:0086265"}


id: GO:0006624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protein processing that takes place in the vacuole. Most protein processing in the vacuole represents proteolytic cleavage of precursors to form active enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"vacuolar protein processing","synonyms":[{"name":"vacuolar protein maturation","type":"related"},{"name":"vacuolar proteolysis","type":"related"}],"termid":"GO:0006624"}


id: GO:0021512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that regulates the coordinated growth and differentiation that establishes the non-random anterior-posterior spatial arrangement of the spinal cord.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"spinal cord patterning","termid":"GO:0021511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord anterior/posterior patterning","synonyms":[{"name":"spinal cord anterior-posterior patterning","type":"exact"},{"name":"spinal cord rostrocaudal patterning","type":"related"}],"termid":"GO:0021512"}


id: SO:0005847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of a gene cassette, which is a mobile genetic element.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_cassette_member","termid":"SO:0005848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cassette_array_member","synonyms":[{"name":"cassette array member","type":"exact"}],"termid":"SO:0005847"}


id: MONDO:0016892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 10","termid":"MONDO:0016875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the short arm of chromosome 10","secondary_identifiers":["UMLS:C0795836","GARD:20814","Orphanet:261938","icd11.foundation:350543001","MEDGEN:162776"],"synonyms":[{"name":"partial deletion of chromosome 10p","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 10","type":"exact"},{"name":"partial monosomy of chromosome 10p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 10","type":"exact"}],"termid":"MONDO:0016892","xrefs":{"Monarch":{"xref_id":"0016892"}}}


id: PBO:0048226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest and DNA damage inducible gamma","termid":"PBO:0048226"}


id: GO:1903740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:25359770","GOC:rn"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidate phosphatase activity (obsolete GO:1903740)","synonyms":[{"name":"activation of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidate phosphatase activity","type":"narrow"},{"name":"activation of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"positive regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"upregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903740"}


id: PBO:0079838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-5 netrin receptor C","termid":"PBO:0079838"}


id: PBO:0005567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-conjugating enzyme Ubc12","termid":"PBO:0005567"}


id: GO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"positively_regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-1 production","secondary_identifiers":["GO:0045362","GO:0050716"],"synonyms":[{"name":"activation of interleukin-1 production","type":"narrow"},{"name":"positive regulation of IL-1 production","type":"exact"},{"name":"positive regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 secretion","type":"narrow"},{"name":"stimulation of interleukin-1 production","type":"narrow"},{"name":"up regulation of interleukin-1 production","type":"exact"},{"name":"up-regulation of interleukin-1 production","type":"exact"},{"name":"upregulation of interleukin-1 production","type":"exact"}],"termid":"GO:0032732"}


id: GO:0033288
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + hydroxyectoine(out/in) = ADP + phosphate + hydroxyectoine(in/out).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"ATPase-coupled monocarboxylic acid transmembrane transporter activity","termid":"GO:0033285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled hydroxyectoine transmembrane transporter activity","secondary_identifiers":["GO:0033287"],"synonyms":[{"name":"ATP-dependent hydroxyectoine transmembrane transporter activity","type":"exact"},{"name":"hydroxyectoine transmembrane transporter activity","type":"broad"},{"name":"hydroxyectoine-transporting ATPase activity","type":"exact"}],"termid":"GO:0033288"}


id: GO:0004445
data:
  {"annotated_genes":["SJAG_04545","SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052659"},{"annotations":[76773,75638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052658"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate.","definition_xrefs":["EC:3.1.3.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"1D-myo-inositol-1,4,5-trisphosphate 5-phosphohydrolase activity","type":"narrow"},{"name":"5PTase activity","type":"related"},{"name":"D-myo-inositol 1,4,5-triphosphate 5-phosphatase activity","type":"narrow"},{"name":"D-myo-inositol 1,4,5-trisphosphate 5-phosphatase activity","type":"narrow"},{"name":"D-myo-inositol(1,4,5)/(1,3,4,5)-polyphosphate 5-phosphatase activity","type":"related"},{"name":"Ins(1,4,5)P(3) 5-phosphatase activity","type":"narrow"},{"name":"Ins(1,4,5)P3 5-phosphatase activity","type":"narrow"},{"name":"Ins(1,4,5)P3/Ins(1,3,4,5)P4 5-phosphatase activity","type":"related"},{"name":"InsP(3)/Ins(1,3,4,5)P(4) 5-phosphatase activity","type":"narrow"},{"name":"InsP3/Ins(1,3,4,5)P4 5-phosphatase activity","type":"narrow"},{"name":"L-myo-inositol 1,4,5-trisphosphate-monoesterase activity","type":"broad"},{"name":"inosine triphosphatase activity","type":"related"},{"name":"inositol 1,4,5-trisphosphate phosphatase activity","type":"broad"},{"name":"inositol phosphate 5-phosphomonoesterase activity","type":"broad"},{"name":"inositol polyphosphate-5-phosphatase activity","type":"related"},{"name":"inositol triphosphate 5-phosphomonoesterase activity","type":"related"},{"name":"inositol trisphosphate phosphomonoesterase activity","type":"related"},{"name":"inositol-1,4,5-trisphosphate 5-phosphatase activity","type":"narrow"},{"name":"inositol-1,4,5-trisphosphate/1,3,4,5-tetrakisphosphate 5-phosphatase activity","type":"related"},{"name":"myo-inositol-1,4,5-trisphosphate 5-phosphatase activity","type":"narrow"},{"name":"type I inositol-polyphosphate phosphatase activity","type":"related"},{"name":"type II inositol polyphosphate 5-phosphatase activity","type":"related"},{"name":"type II inositol-1,4,5-trisphosphate 5-phosphatase activity","type":"narrow"}],"termid":"GO:0004445","terms_by_termid":{"GO:0052658":null,"GO:0052659":null}}


id: MONDO:0033672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Duane anomaly-myopathy-scoliosis syndrome is characterized by the association of bilateral Duane anomaly type 3, severe scoliosis of early onset, congenital myopathy with hypotonia without muscular weakness, delayed motor development, and short stature. It has been described in one pair of sibs. The Duane type 3 anomaly consists of eye abduction and adduction palsy, globe retraction and narrowing of the palpebral fissure. Muscular biopsy shows aspecific myopathy. Intellectual development is normal. The syndrome is most likely inherited in an autosomal recessive manner. It differs from the Crisfield-Dretakis-Sharpe syndrome, in which short stature and muscular features are absent. Surgery of the scoliosis is necessary. Functional prognosis depends on the severity of the visual handicap.","definition_xrefs":["Orphanet:50817"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Duane anomaly-myopathy-scoliosis syndrome","secondary_identifiers":["MEDGEN:928219","GARD:18842","UMLS:C4302550"],"termid":"MONDO:0033672","xrefs":{"Monarch":{"xref_id":"0033672"}}}


id: PBO:0017687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 heme lyase Cyt2 (predicted)","termid":"PBO:0017687"}


id: GO:1901195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of formation of translation preinitiation complex","termid":"GO:1901193"},{"relation_name":"positively_regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0065003","GO:0002181"],"is_obsolete":false,"name":"positive regulation of formation of translation preinitiation complex","synonyms":[{"name":"activation of formation of translation pre-initiation complex","type":"exact"},{"name":"activation of formation of translation preinitiation complex","type":"narrow"},{"name":"activation of translation preinitiation complex assembly","type":"exact"},{"name":"positive regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"positive regulation of translation preinitiation complex assembly","type":"exact"},{"name":"up regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"up regulation of formation of translation preinitiation complex","type":"exact"},{"name":"up regulation of translation preinitiation complex assembly","type":"exact"},{"name":"up-regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"up-regulation of formation of translation preinitiation complex","type":"exact"},{"name":"up-regulation of translation preinitiation complex assembly","type":"exact"},{"name":"upregulation of formation of translation pre-initiation complex","type":"exact"},{"name":"upregulation of formation of translation preinitiation complex","type":"exact"},{"name":"upregulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901195"}


id: PBO:0004648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChaC-like protein, predicted cation transport regulator","termid":"PBO:0004648"}


id: PBO:0085868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has weak similarity to E. coli GTP-binding protein gtp1; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085868"}


id: PBO:0113805
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peak copy number 100 at endocytic sites","termid":"PBO:0113805"}


id: MONDO:0800200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, type 2B4","secondary_identifiers":["MEDGEN:1682592","UMLS:C5193002"],"synonyms":[{"name":"DA2B4","type":"exact"}],"termid":"MONDO:0800200","xrefs":{"Monarch":{"xref_id":"0800200"}}}


id: PBO:0112865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombephosphoproteomics_unige_ch_fusion_gene","termid":"PBO:0112865"}


id: PBO:0079634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 5, Y-linked","termid":"PBO:0079634"}


id: GO:0004479
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80029],"is_not":false,"summary":null,"term":"GO:0004479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA.","definition_xrefs":["EC:2.1.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0140101","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methionyl-tRNA formyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:METHIONYL-TRNA-FORMYLTRANSFERASE-RXN","GO:0001718","GO:0070128","RHEA:24380","Reactome:R-HSA-5389841"],"synonyms":[{"name":"10-formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase activity","type":"related"},{"name":"N(10)-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"N-terminal peptidyl-methionine N-formylation","type":"related"},{"name":"N10-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"conversion of met-tRNAf to fmet-tRNA","type":"related"},{"name":"conversion of mitochondrial met-tRNAf to fmet-tRNA","type":"related"},{"name":"formylmethionyl-transfer ribonucleic synthetase activity","type":"related"},{"name":"methionyl ribonucleic formyltransferase activity","type":"related"},{"name":"methionyl-tRNA Met formyltransferase activity","type":"related"},{"name":"methionyl-tRNA transformylase activity","type":"related"},{"name":"methionyl-transfer RNA transformylase activity","type":"related"},{"name":"methionyl-transfer ribonucleate methyltransferase activity","type":"related"},{"name":"methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"mitochondrial N-terminal peptidyl-methionine N-formylation","type":"related"}],"termid":"GO:0004479","terms_by_termid":{"GO:0004479":null}}


id: MONDO:0006471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoid cystic carcinoma that arises from the trachea. It spreads to the submucosal tracheal tissue and to regional lymph nodes.","definition_xrefs":["NCIT:C6051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trachea carcinoma","termid":"MONDO:0003184"},{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"tracheal adenoid cystic carcinoma","secondary_identifiers":["UMLS:C0345945","EFO:1000598","DOID:4875","MEDGEN:91058","SCTID:254619006"],"synonyms":[{"name":"adenoid cystic carcinoma of the trachea","type":"exact"},{"name":"adenoid cystic carcinoma of trachea","type":"exact"},{"name":"trachea adenoid cystic carcinoma","type":"exact"},{"name":"tracheal adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0006471","xrefs":{"Monarch":{"xref_id":"0006471"}}}


id: GO:1990236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the proteasome core complex (AKA core particle (CP)) from the cytoplasm into the nucleus.","definition_xrefs":["GOC:rb","PMID:23982732","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"import into nucleus","termid":"GO:0051170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"proteasome core complex import into nucleus","termid":"GO:1990236"}


id: PBO:0061471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRBF2 pseudogene 6","termid":"PBO:0061471"}


id: PATO:0001346
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. pombe mating type determined by the mat1-Pc and mat1-Pi on the mat1 locus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe mating type","termid":"PATO:0001343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"h plus","synonyms":[{"name":"P","type":"exact"},{"name":"h+","type":"exact"}],"termid":"PATO:0001346"}


id: MONDO:1011724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency disease, non-human animal","secondary_identifiers":["OMIA:000550"],"termid":"MONDO:1011724","xrefs":{"Monarch":{"xref_id":"1011724"}}}


id: MONDO:0008641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited group of small vessel diseases comprised of cerebroretinal vasculopathy (CRV), hereditary vascular retinopathy (HRV) and hereditary endotheliopathy with retinopathy, nephropathy and stroke (HERNS); all exhibiting progressive visual impairment as well as variable cerebral dysfunction.","definition_xrefs":["Orphanet:247691"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete disease of glomerular basement membrane (obsolete MONDO:0019723)","termid":"MONDO:0019723"},{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"},{"relation_name":"is_a","term_name":"TREX1-related type 1 interferonopathy","termid":"MONDO:0700256"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal vasculopathy with cerebral leukoencephalopathy and systemic manifestations","secondary_identifiers":["MESH:C566007","NORD:1910","DOID:0111567","icd11.foundation:554838792","SCTID:720854004","GARD:1217","SCTID:721141004","OMIM:192315","MEDGEN:348124","UMLS:C1860518"],"synonyms":[{"name":"ADRVCL","type":"related"},{"name":"CRV","type":"related"},{"name":"HVR","type":"related"},{"name":"RVCL","type":"exact"},{"name":"RVCL-S","type":"exact"},{"name":"autosomal dominant retinal vasculopathy with cerebral leukodystrophy","type":"related"},{"name":"cerebroretinal vasculopathy","type":"related"},{"name":"cerebroretinal vasculopathy, hereditary","type":"related"},{"name":"grand Kaine fulling syndrome","type":"related"},{"name":"grand-Kaine-fulling syndrome","type":"related"},{"name":"hereditary vascular retinopathy","type":"exact"},{"name":"retinal vasculopathy and cerebral leukoencephalopathy","type":"exact"},{"name":"retinal vasculopathy with cerebral leukodystrophy","type":"related"},{"name":"retinopathy, vascular, with cerebral and renal involvement and Raynaud and migraine phenomena","type":"related"},{"name":"vasculopathy, retinal, with cerebral leukodystrophy","type":"related"},{"name":"vasculopathy, retinal, with cerebral leukoencephalopathy and systemic manifestations","type":"exact"}],"termid":"MONDO:0008641","xrefs":{"Monarch":{"xref_id":"0008641"}}}


id: GO:0031569
data:
  {"annotated_genes":["SJAG_04280","SJAG_04332","SJAG_03602","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96415,97731,100322,118008],"is_not":false,"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint prior to the G2/M transition of mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"},{"relation_name":"is_a","term_name":"mitotic cell size control checkpoint signaling","termid":"GO:0031567"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03602":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"mitotic G2 cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072453"],"synonyms":[{"name":"G2 cell size control checkpoint","type":"exact"},{"name":"G2/M transition size control checkpoint","type":"exact"},{"name":"mitotic G2 cell size control checkpoint","type":"related"},{"name":"mitotic cell cycle G2/M transition size control checkpoint","type":"exact"},{"name":"signal transduction involved in G2 cell size control checkpoint","type":"related"},{"name":"signal transduction involved in G2/M transition size control checkpoint","type":"related"},{"name":"signal transduction involved in mitotic cell cycle G2/M transition size control checkpoint","type":"related"}],"termid":"GO:0031569","terms_by_termid":{"GO:0031569":null}}


id: GO:0004526
data:
  {"annotated_genes":["SJAG_01623","SJAG_04916","SJAG_06613","SJAG_03796","SJAG_02553","SJAG_00306","SJAG_04582","SJAG_00955","SJAG_03234"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60961,64512,70156,72981,96588,98684,103974,106494,117311],"is_not":false,"summary":null,"term":"GO:0004526"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor.","definition_xrefs":["EC:3.1.26.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific ribonuclease activity","termid":"GO:0004549"},{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00955":null,"SJAG_01623":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0140098","GO:0140101","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ribonuclease P activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5696810","Wikipedia:RNase_P","MetaCyc:3.1.26.5-RXN"],"synonyms":[{"name":"RNase P","type":"exact"},{"name":"tRNA 5' leader endonuclease activity","type":"exact"}],"termid":"GO:0004526","terms_by_termid":{"GO:0004526":null}}


id: PBO:0068337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 103","termid":"PBO:0068337"}


id: MONDO:0011553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 4q31.","definition_xrefs":["DOID:0110484","PMID:11101839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 26","secondary_identifiers":["OMIM:605428","GARD:22599","MESH:C565329","UMLS:C1854275","MEDGEN:340185"],"synonyms":[{"name":"DFNB26","type":"narrow"},{"name":"autosomal recessive deafness 26","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 26","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 26","type":"narrow"},{"name":"deafness, autosomal recessive 26","type":"narrow"}],"termid":"MONDO:0011553","xrefs":{"Monarch":{"xref_id":"0011553"}}}


id: GO:1902128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-lariciresinol.","definition_xrefs":["PMID:15949826","GOC:TermGenie","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"(-)-lariciresinol metabolic process","termid":"GO:1902127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(-)-lariciresinol catabolic process","synonyms":[{"name":"(-)-lariciresinol breakdown","type":"exact"},{"name":"(-)-lariciresinol catabolism","type":"exact"},{"name":"(-)-lariciresinol degradation","type":"exact"}],"termid":"GO:1902128"}


id: MONDO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autonomic peripheral neuropathy (obsolete MONDO:0000604)","termid":"MONDO:0000604","xrefs":{"Monarch":{"xref_id":"0000604"}}}


id: PBO:0038987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor beta 1","termid":"PBO:0038987"}


id: MONDO:0020137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete frontotemporal degeneration with dementia (obsolete MONDO:0020137)","secondary_identifiers":["Orphanet:98535"],"termid":"MONDO:0020137","xrefs":{"Monarch":{"xref_id":"0020137"}}}


id: GO:1905217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an astaxanthin stimulus.","definition_xrefs":["PMID:22309505","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to astaxanthin","synonyms":[{"name":"response to (3S,3'S)-3,3'-dihydroxy-beta,beta-carotene-4,4'-dione","type":"exact"}],"termid":"GO:1905217"}


id: GO:0048171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers.","definition_xrefs":["PMID:11891290","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-term neuronal synaptic plasticity","termid":"GO:0048169"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of long-term neuronal synaptic plasticity","synonyms":[{"name":"down regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"down-regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"downregulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"inhibition of long-term neuronal synaptic plasticity","type":"narrow"}],"termid":"GO:0048171"}


id: MONDO:0014705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any craniosynostosis in which the cause of the disease is a mutation in the ZIC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated oxycephaly","termid":"MONDO:0018971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis 6","secondary_identifiers":["GARD:18048","OMIM:616602","UMLS:C4225269","MEDGEN:904675","Orphanet:672985"],"synonyms":[{"name":"CRS6","type":"related"},{"name":"ZIC1 craniosynostosis","type":"exact"},{"name":"craniosynostosis 6","type":"exact"},{"name":"craniosynostosis caused by mutation in ZIC1","type":"exact"},{"name":"craniosynostosis type 6","type":"exact"}],"termid":"MONDO:0014705","xrefs":{"Monarch":{"xref_id":"0014705"}}}


id: MOD:00045
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to pros-phospho-L-histidine (N-pi-phospho-L-histidine, 3'-phospho-L-histidine).","definition_xrefs":["RESID:AA0036","PubMed:5642389","PubMed:6692818","PubMed:7669763","PubMed:7803390","PubMed:1549615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated L-histidine","termid":"MOD:00890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"3'-phospho-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(3-phosphono-3H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(3-phosphono-3H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-phospho-L-histidine","type":"exact"},{"name":"ACT_SITE Pros-phosphohistidine intermediate","type":"exact"},{"name":"MOD_RES Pros-phosphohistidine","type":"exact"},{"name":"N(pi)-phosphohistidine","type":"exact"},{"name":"N3-phosphonohistidine","type":"exact"},{"name":"ND1-phosphonohistidine","type":"exact"},{"name":"NpPHis","type":"exact"},{"name":"Npi-phosphorylated L-histidine","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"histidine-1-phosphate","type":"related"},{"name":"histidine-N(delta)-phosphate","type":"exact"},{"name":"histidine-N3'-phosphate","type":"exact"},{"name":"pros-phosphohistidine","type":"exact"}],"termid":"MOD:00045"}


id: PBO:0073888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 5","termid":"PBO:0073888"}


id: FYPO:0007211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring assembly begins earlier than normal. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["PomBase:mah","PMID:15184401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0000631","FYPO:0004803"],"is_obsolete":false,"name":"premature actomyosin contractile ring assembly","synonyms":[{"name":"advanced actomyosin contractile ring assembly","type":"exact"},{"name":"premature actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"premature actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"premature actomyosin contractile ring formation","type":"related"},{"name":"premature contractile ring assembly","type":"exact"},{"name":"premature cytokinetic contractile ring assembly","type":"exact"},{"name":"premature mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"premature mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0007211"}


id: PBO:0073831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 7","termid":"PBO:0073831"}


id: _global:translates_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Inverse of translation _of.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translates_to","termid":"_global:translates_to"}


id: PBO:0080090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 51","termid":"PBO:0080090"}


id: MONDO:0016381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrichosis lanuginosa congenita is a rare congenital skin disease characterized by the presence of 3 to 5cm long lanugo-type hair on the entire body, with the exception of palms, soles, and mucous membranes.","definition_xrefs":["Orphanet:2222"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes hypertrichosis (obsolete MONDO:0020185)","termid":"MONDO:0020185"},{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hypertrichosis lanuginosa congenita","secondary_identifiers":["MEDGEN:66727","UMLS:C0235864","SCTID:201163007","MESH:C538389","OMIM:145700","GARD:2865","icd11.foundation:199539869"],"synonyms":[{"name":"congenital hypertrichosis lanuginosa","type":"related"},{"name":"hypertrichosis lanuginosa congenita","type":"exact"},{"name":"hypertrichosis lanuginosa universalis","type":"related"},{"name":"hypertrichosis universalis","type":"exact"}],"termid":"MONDO:0016381","xrefs":{"Monarch":{"xref_id":"0016381"}}}


id: GO:1900005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serine-type endopeptidase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endopeptidase activity","termid":"GO:0010950"},{"relation_name":"is_a","term_name":"regulation of serine-type endopeptidase activity","termid":"GO:1900003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serine-type endopeptidase activity","synonyms":[{"name":"positive regulation of blood coagulation factor activity","type":"related"},{"name":"up regulation of blood coagulation factor activity","type":"related"},{"name":"up regulation of serine-type endopeptidase activity","type":"related"}],"termid":"GO:1900005"}


id: GO:0033209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by tumor necrosis factor binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to tumor necrosis factor","termid":"GO:0071356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"tumor necrosis factor-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-5668541","Reactome:R-HSA-75893"],"synonyms":[{"name":"TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"adipocytokine signaling pathway","type":"related"},{"name":"tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"tumor necrosis factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0033209"}


id: MONDO:0008696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of acanthosis nigricans, insulin resistance, severe muscle cramps and acral hypertrophy.","definition_xrefs":["Orphanet:90301"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"acanthosis nigricans","termid":"MONDO:0007035"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acanthosis nigricans-insulin resistance-muscle cramps-acral enlargement syndrome","secondary_identifiers":["MESH:C536000","GARD:453","OMIM:200170","UMLS:C1860215","MEDGEN:348051"],"synonyms":[{"name":"acanthosis nigricans muscle cramps acral enlargement","type":"related"},{"name":"acanthosis nigricans with muscle cramps and acral enlargement","type":"related"},{"name":"familial insulin resistance with acanthosis nigricans, acral hypertrophy and muscle cramps","type":"related"}],"termid":"MONDO:0008696","xrefs":{"Monarch":{"xref_id":"0008696"}}}


id: PBO:0088513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lis1 homology and WD repeat protein","termid":"PBO:0088513"}


id: GO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-27p28 subunit (product of the IL27 gene) and an EBI3 subunit and is secreted into the extracellular space.","definition_xrefs":["GOC:add","PMID:19161428","PMID:15999093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"interleukin-27 complex","synonyms":[{"name":"EBI3","type":"narrow"},{"name":"IL-27 complex","type":"exact"},{"name":"IL27","type":"narrow"},{"name":"p28","type":"narrow"}],"termid":"GO:0070744"}


id: FYPO:0001726
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-cysteine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular sulfur level","termid":"FYPO:0001544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular cysteine level","synonyms":[{"name":"normal cellular L-cysteine level","type":"exact"},{"name":"normal cellular cysteine level during mitotic cell cycle","type":"related"},{"name":"normal cellular cysteine level during vegetative growth","type":"exact"},{"name":"normal level of cysteine in cell","type":"exact"}],"termid":"FYPO:0001726"}


id: MONDO:1010729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any leukocyte adhesion deficiency that occurs in cattle due to a mutation in the ITGB2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency, non-human animal","termid":"MONDO:1012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte adhesion deficiency, ITGB2-related, cattle","secondary_identifiers":["OMIA:000595-9913"],"synonyms":[{"name":"BLAD","type":"exact"},{"name":"bovine leukocyte adhesion deficiency","type":"exact"},{"name":"leukocyte adhesion deficiency type I, cattle","type":"related"}],"termid":"MONDO:1010729","xrefs":{"Monarch":{"xref_id":"1010729"}}}


id: GO:0004497
data:
  {"annotated_genes":["SJAG_03249","SJAG_03750","SJAG_02285","SJAG_03018","SJAG_04913","SJAG_05311","SJAG_00459","SJAG_04000","SJAG_00370","SJAG_04608","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59328],"is_not":false,"summary":null,"term":"GO:0004497"},{"annotations":[62964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008682"},{"annotations":[111252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160224"},{"annotations":[61187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106364"},{"annotations":[71609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000254"},{"annotations":[73357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019135"},{"annotations":[74122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080132"},{"annotations":[57687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004499"},{"annotations":[95979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031172"},{"annotations":[61191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016712"},{"annotations":[74292,93669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102772"},{"annotations":[79017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004506"},{"annotations":[90312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"}]},"cv_name":"molecular_function","definition":"Catalysis of the incorporation of one atom of molecular oxygen (O2) into the substrate and the reduction of the other atom of O2 to water.","definition_xrefs":["PMID:1444267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00459":null,"SJAG_02285":null,"SJAG_03018":null,"SJAG_03249":null,"SJAG_03750":null,"SJAG_04000":null,"SJAG_04032":null,"SJAG_04608":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"monooxygenase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9753285","Reactome:R-HSA-211924","Reactome:R-HSA-5663050","Reactome:R-HSA-211960","Reactome:R-HSA-212005","Reactome:R-HSA-211882","Reactome:R-HSA-76472","Reactome:R-HSA-9756180","Reactome:R-HSA-2161940","Reactome:R-HSA-5662692","Reactome:R-HSA-211988","Reactome:R-HSA-211904","Reactome:R-HSA-9915971","Reactome:R-HSA-76475","Reactome:R-HSA-211962","Reactome:R-HSA-2161814","Reactome:R-HSA-211919","Reactome:R-HSA-156526","Reactome:R-HSA-213175","Reactome:R-HSA-2161795","Reactome:R-HSA-211968","Reactome:R-HSA-211948","Reactome:R-HSA-5605147","Reactome:R-HSA-5602242","Reactome:R-HSA-9915997","Reactome:R-HSA-9018874","Reactome:R-HSA-211910","Reactome:R-HSA-76456","Reactome:R-HSA-9915993","Reactome:R-HSA-9027044","Reactome:R-HSA-217258","Reactome:R-HSA-5423647","Reactome:R-HSA-76373","Reactome:R-HSA-76397","Reactome:R-HSA-215526","Reactome:R-HSA-5423664","Reactome:R-HSA-5602295","Reactome:R-HSA-76466","Reactome:R-HSA-2162191","Reactome:R-HSA-211959","Reactome:R-HSA-2161890","Reactome:R-HSA-8865107","Reactome:R-HSA-211991","Reactome:R-HSA-143468","Reactome:R-HSA-9037761","Reactome:R-HSA-5602272","Reactome:R-HSA-9749986","Reactome:R-HSA-76434","Reactome:R-HSA-9756138","Reactome:R-HSA-9915992","Reactome:R-HSA-212004","Reactome:R-HSA-9027042","Reactome:R-HSA-9027043","Reactome:R-HSA-9750016","Reactome:R-HSA-76416","Reactome:R-HSA-5423672","Reactome:R-HSA-211929","Reactome:R-HSA-2161899","Reactome:R-HSA-76354","Reactome:R-HSA-9027302","Reactome:R-HSA-5662662","Reactome:R-HSA-9027321","Reactome:R-HSA-9756162","Reactome:R-HSA-5423678","Reactome:R-HSA-76426","Reactome:R-HSA-9756169","Reactome:R-HSA-76386"],"synonyms":[{"name":"hydroxylase activity","type":"related"},{"name":"mixed-function oxidase","type":"related"}],"termid":"GO:0004497","terms_by_termid":{"GO:0000254":null,"GO:0004497":null,"GO:0004499":null,"GO:0004506":null,"GO:0008398":null,"GO:0008682":null,"GO:0016712":null,"GO:0019135":null,"GO:0031172":null,"GO:0080132":null,"GO:0102772":null,"GO:0106364":null,"GO:0160224":null}}


id: GO:0034728
data:
  {"annotated_genes":["SJAG_04670","SJAG_04272","SJAG_03128","SJAG_04038","SJAG_00942","SJAG_00336","SJAG_02198","SJAG_02906","SJAG_01653","SJAG_02314","SJAG_03542","SJAG_03982","SJAG_04257","SJAG_02416","SJAG_00170","SJAG_00303"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59176,76585,113252,115283],"is_not":false,"summary":null,"term":"GO:0034728"},{"annotations":[75043,71628,109684,116541,80674,62959,74790,92968,98341,92966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006334"},{"annotations":[98977,91908,118910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of one or more nucleosomes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"is_a","term_name":"protein-DNA complex organization","termid":"GO:0071824"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00303":null,"SJAG_00336":null,"SJAG_00942":null,"SJAG_01653":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_02906":null,"SJAG_03128":null,"SJAG_03542":null,"SJAG_03982":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04670":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"nucleosome organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"nucleosome organisation","type":"exact"}],"termid":"GO:0034728","terms_by_termid":{"GO:0006334":null,"GO:0006337":null,"GO:0034728":null}}


id: MONDO:0032678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disorder of glutamine metabolism","termid":"MONDO:0017352"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"glutaminase deficiency","termid":"MONDO:0600001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 71","secondary_identifiers":["DOID:0112207","Orphanet:557064","MEDGEN:1680812","UMLS:C5193030","OMIM:618328","GARD:17994"],"synonyms":[{"name":"DEE71","type":"exact"},{"name":"EIEE71","type":"exact"},{"name":"Glutaminase Deficiency With Neonatal Epileptic Encephalopathy","type":"related"},{"name":"developmental and epileptic encephalopathy 71","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 71","type":"exact"},{"name":"neonatal epileptic encephalopathy due to glutaminase deficiency","type":"exact"}],"termid":"MONDO:0032678","xrefs":{"Monarch":{"xref_id":"0032678"}}}


id: GO:0045579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of B cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte differentiation","termid":"GO:0045621"},{"relation_name":"is_a","term_name":"positive regulation of B cell activation","termid":"GO:0050871"},{"relation_name":"positively_regulates","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell differentiation","synonyms":[{"name":"activation of B cell differentiation","type":"narrow"},{"name":"positive regulation of B cell development","type":"related"},{"name":"positive regulation of B lymphocyte differentiation","type":"exact"},{"name":"positive regulation of B-cell differentiation","type":"exact"},{"name":"positive regulation of B-lymphocyte differentiation","type":"exact"},{"name":"stimulation of B cell differentiation","type":"narrow"},{"name":"up regulation of B cell differentiation","type":"exact"},{"name":"up-regulation of B cell differentiation","type":"exact"},{"name":"upregulation of B cell differentiation","type":"exact"}],"termid":"GO:0045579"}


id: PBO:0086837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein predicted to have carbon-sulfur lyase activity; transcriptionally regulated by Upc2p via an upstream sterol response element; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and the cytoplasm; not an essential gene; YML082W has a paralog, STR2, that arose from the whole genome duplication","termid":"PBO:0086837"}


id: GO:0033598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mammary gland epithelial cells, resulting in the expansion of a cell population. Mammary gland epithelial cells make up the covering of surfaces of the mammary gland. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"mammary gland epithelium development","termid":"GO:0061180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland epithelial cell proliferation","termid":"GO:0033598"}


id: FYPO:0001972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal, and results in the formation of a septated cell. Nuclear division, contractile ring formation and constriction, and septum assembly are apparently normal, but the septum does not degrade. Additional rounds of nuclear division and cytokinesis may take place, resulting in the formation of a multiseptate cell.","definition_xrefs":["PMID:12654901","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis resulting in septated cell","synonyms":[{"name":"abnormal cell separation after cytokinesis resulting in septated cell during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis resulting in septated cell during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation resulting in septated cell","type":"exact"},{"name":"abnormal septum digestion after cytokinesis resulting in septated cell","type":"exact"},{"name":"boomerang shaped","type":"related"}],"termid":"FYPO:0001972"}


id: GO:0048089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental pigmentation","termid":"GO:0048070"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"female pigmentation","termid":"GO:0048095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female pigmentation","termid":"GO:0048089"}


id: PBO:0060699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA4 mitochondrial complex associated","termid":"PBO:0060699"}


id: GO:0035986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The assembly of chromatin into senescence-associated heterochromatin foci (SAHF), transcriptionally-silent heterochromatin structures present in senescent cells, containing the condensed chromatin of one chromosome, and enriched for histone modifications. Formation of these chromatin structures is thought to repress expression of proliferation-promoting genes.","definition_xrefs":["GOC:yaf","PMID:21248468","PMID:15621527"],"gene_count":0,"genotype_count":0,"name":"obsolete senescence-associated heterochromatin focus assembly (obsolete GO:0035986)","synonyms":[{"name":"SAHF formation","type":"exact"},{"name":"senescence-associated heterochromatin foci formation","type":"exact"},{"name":"senescence-associated heterochromatin focus formation","type":"exact"}],"termid":"GO:0035986"}


id: GO:0016119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carotenes, hydrocarbon carotenoids.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"carotene metabolic process","synonyms":[{"name":"carotene metabolism","type":"exact"}],"termid":"GO:0016119"}


id: FYECO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with uracil as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, uracil nitrogen source","termid":"FYECO:0000276"}


id: MONDO:0015155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spotted fever rickettsiosis (obsolete MONDO:0015155)","termid":"MONDO:0015155","xrefs":{"Monarch":{"xref_id":"0015155"}}}


id: PBO:0073257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 1","termid":"PBO:0073257"}


id: PR:Q9P7Y3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkr1 gene.","definition_xrefs":["UniProtKB:Q9P7Y3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase assembly factor pkr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.02","synonyms":[{"name":"Spom972h-pkr1","type":"exact"}],"termid":"PR:Q9P7Y3"}


id: GO:0010078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of root meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"},{"relation_name":"part_of","term_name":"root morphogenesis","termid":"GO:0010015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of root meristem identity","termid":"GO:0010078"}


id: PR:O74541
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C777.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.02","synonyms":[{"name":"Spom972h-SPCC777.02","type":"exact"}],"termid":"PR:O74541"}


id: GO:0050220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = prostaglandin E(2).","definition_xrefs":["EC:5.3.99.3","RHEA:12893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"prostaglandin-E synthase activity","secondary_identifiers":["KEGG_REACTION:R02265","Reactome:R-HSA-2161660","Reactome:R-HSA-265295","MetaCyc:PROSTAGLANDIN-E-SYNTHASE-RXN"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"related"},{"name":"PGE isomerase activity","type":"related"},{"name":"PGE2 isomerase activity","type":"related"},{"name":"PGH-PGE isomerase activity","type":"related"},{"name":"Prostaglandin-H(2) E-isomerase activity","type":"related"},{"name":"endoperoxide isomerase activity","type":"related"},{"name":"prostaglandin H-E isomerase activity","type":"related"},{"name":"prostaglandin R-prostaglandin E isomerase activity","type":"related"},{"name":"prostaglandin endoperoxide E isomerase activity","type":"related"},{"name":"prostaglandin endoperoxide E2 isomerase activity","type":"related"},{"name":"prostaglandin-H2 E-isomerase activity","type":"related"}],"termid":"GO:0050220"}


id: FYECO:0000285
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were cold shocked followed by recovery at a temperature range normal for standard pombe growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock and recovery at normal temperature","termid":"FYECO:0000285"}


id: PBO:0002739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ZNF277 ortholog","termid":"PBO:0002739"}


id: PBO:0043057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline phosphotransferase 1","termid":"PBO:0043057"}


id: MONDO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic meningitis","secondary_identifiers":["UMLS:C0854214","SCTID:445059005","ICD9:320.81","MEDGEN:678523","DOID:14559"],"synonyms":[{"name":"meningitis caused by anaerobic bacteria","type":"exact"},{"name":"meningitis due to anaerobic bacteria","type":"exact"}],"termid":"MONDO:0002000","xrefs":{"Monarch":{"xref_id":"0002000"}}}


id: PR:Q09764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24H6.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24H6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.11c","synonyms":[{"name":"Spom972h-SPAC24H6.11c","type":"exact"}],"termid":"PR:Q09764"}


id: PBO:0029739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level_during_nitrogen_starvation","termid":"PBO:0029739"}


id: PBO:0002544
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.30.-","termid":"PBO:0002544"}


id: MONDO:0017068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"upper thoracic spina bifida aperta","secondary_identifiers":["Orphanet:268740","icd11.foundation:772010291","GARD:20957"],"termid":"MONDO:0017068","xrefs":{"Monarch":{"xref_id":"0017068"}}}


id: MONDO:1010217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schwannomatosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"neurofibromatosis, non-human animal","termid":"MONDO:1011437"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schwannomatosis, non-human animal","secondary_identifiers":["OMIA:001963"],"termid":"MONDO:1010217","xrefs":{"Monarch":{"xref_id":"1010217"}}}


id: PBO:0031301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spherical_vegetative_cell","termid":"PBO:0031301"}


id: PBO:0068281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 2","termid":"PBO:0068281"}


id: PBO:0057142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 221","termid":"PBO:0057142"}


id: GO:0050273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-succinylglutathione + H2O = glutathione + H+ + succinate.","definition_xrefs":["EC:3.1.2.13","RHEA:16713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"S-succinylglutathione hydrolase activity","secondary_identifiers":["MetaCyc:S-SUCCINYLGLUTATHIONE-HYDROLASE-RXN","KEGG_REACTION:R00499"],"termid":"GO:0050273"}


id: GO:0102647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: sedoheptulose 7-phosphate + D-ribose 5-phosphate = D-glycero-D-altro-octulose 8-phosphate + D-erythrose 4-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete D-ribose 5-phosphate:D-sedoheptulose 7-phosphate transaldolase activity (obsolete GO:0102647)","termid":"GO:0102647"}


id: GO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Immune response taking place in the Peyer's patch, nodular lymphoid structures on the serosal surface of the small intestine.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response in gut-associated lymphoid tissue","termid":"GO:0002387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response in Peyer's patch","termid":"GO:0002388"}


id: MONDO:0014405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"STING-associated vasculopathy with onset in infancy (SAVI) is a rare, genetic autoinflammatory disorder, type I interferonopathy due to constitutive STING (STimulator of INterferon Genes) activation, characterized by neonatal or infantile onset systemic inflammation and small vessel vasculopathy resulting in severe skin, pulmonary and joint lesions. Patients present with intermittent low-grade fever, recurrent cough and failure to thrive, in association with progressive interstitial lung disease, polyarthritis and violaceous scaling lesions on fingers, toes, nose, cheeks, and ears (which are exacerbated by cold exposure) that often progress to chronic acral ulceration, necrosis and autoamputation.","definition_xrefs":["Orphanet:425120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STING-associated vasculopathy with onset in infancy","secondary_identifiers":["SCTID:711164003","UMLS:C4014722","DOID:0111457","MEDGEN:863159","GARD:12357","OMIM:615934","ICD9:279.8"],"synonyms":[{"name":"SAVI","type":"exact"},{"name":"STING-associated vasculopathy, infantile-onset","type":"related"}],"termid":"MONDO:0014405","xrefs":{"Monarch":{"xref_id":"0014405"}}}


id: PBO:0068987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 231, pseudogene","termid":"PBO:0068987"}


id: PBO:0059446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A19, pseudogene","termid":"PBO:0059446"}


id: GO:0021584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the pons. This process pertains to the initial formation of a structure from unspecified parts. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hindbrain formation","termid":"GO:0021576"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons formation","termid":"GO:0021584"}


id: PBO:0111496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex associated RNA-binding protein Rns1","termid":"PBO:0111496"}


id: MONDO:0016807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pure mitochondrial myopathy is a rare mitochondrial disease characterized by exclusive skeletal muscle involvement, without clinical evidence of other organ involvement, manifesting with progressive limb weakness, proximal limb muscle atrophy, and eye muscle anomalies (e.g. ocular motility restriction, ptosis). Patients may present with lactic acidosis, diffuse myalgia and overall fatigability (particularly during/after physical activities), dysphagia, and diminished deep tendon reflexes.","definition_xrefs":["Orphanet:254854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pure mitochondrial myopathy","secondary_identifiers":["GARD:20768","MEDGEN:1375079","SCTID:732245008","UMLS:C4517289","icd11.foundation:141365898"],"termid":"MONDO:0016807","xrefs":{"Monarch":{"xref_id":"0016807"}}}


id: PBO:0114432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFKFB3 antisense RNA 1","termid":"PBO:0114432"}


id: PBO:0110067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER or Golgi multispanning membrane VanZ-like family protein","termid":"PBO:0110067"}


id: MONDO:0004543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the testis and is characterized by the presence of immature glands.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular yolk sac tumor","termid":"MONDO:0003402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"enteric pattern testicular yolk sac tumor","secondary_identifiers":["NCIT:C39932","UMLS:C1515304","DOID:8362","MEDGEN:308261"],"synonyms":[{"name":"testicular yolk Sac tumor, enteric pattern","type":"exact"}],"termid":"MONDO:0004543","xrefs":{"Monarch":{"xref_id":"0004543"}}}


id: PR:O60145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03005","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.15","secondary_identifiers":["UniProtKB:O60145"],"synonyms":[{"name":"Spom972h-CDK10","type":"exact"}],"termid":"PR:O60145"}


id: PBO:0080195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 3","termid":"PBO:0080195"}


id: _global:negatively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of,_negative_effect","termid":"_global:causally_upstream_of,_negative_effect"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates","secondary_identifiers":["RO:0002212"],"termid":"_global:negatively_regulates"}


id: GO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromosome involved in sex determination.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"sex chromosome","termid":"GO:0000803"}


id: GO:0044647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An occluding cell-cell junction formed between the membranes of the apical end of an invading cell (e.g. a merozoite in Plasmodium) and a host target cell (e.g. erythrocyte for Plasmodium infection). The junction is a stable yet dynamic structure that moves around the symbiont cell during invasion, enclosing it in a vacuole surrounded by a membrane.","definition_xrefs":["PMID:21803641","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicellular tight junction","termid":"GO:0005923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host-symbiont bicellular tight junction","synonyms":[{"name":"host-parasite tight junction","type":"exact"},{"name":"host-pathogen tight junction","type":"exact"}],"termid":"GO:0044647"}


id: GO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of neuroepithelial cell differentiation. Neuroepithelial cell differentiation is the process in which epiblast cells acquire specialized features of neuroepithelial cells.","definition_xrefs":["GOC:dph","PMID:16678814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"regulation of timing of cell differentiation","termid":"GO:0048505"},{"relation_name":"negatively_regulates","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inhibition of neuroepithelial cell differentiation","synonyms":[{"name":"negative regulation of neural plate formation","type":"narrow"},{"name":"repression of premature neural plate formation","type":"narrow"}],"termid":"GO:0002085"}


id: PBO:0047228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 229 member B","termid":"PBO:0047228"}


id: MOD:00800
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-histidine residue, homocitric acid and a one-vanadium seven-iron nine-sulfur cluster to L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide.","definition_xrefs":["RESID:AA0393","PubMed:2345152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"vanadium containing modified residue","termid":"MOD:00772"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide","synonyms":[{"name":"CysHis-[V7Fe9S]","type":"exact"},{"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide carbide","type":"exact"},{"name":"nitrogenase iron-vanadium cofactor","type":"exact"}],"termid":"MOD:00800"}


id: MOD:00796
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to L-ornithine.","definition_xrefs":["PubMed:15489230","Unimod:372","DeltaMass:129","OMSSA:163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-ornithine (Arg)","synonyms":[{"name":"Arg->Orn","type":"related"},{"name":"Ornithine (from Arginine)","type":"exact"},{"name":"Ornithine from Arginine","type":"related"},{"name":"Ornithyl","type":"exact"},{"name":"arg2orn","type":"exact"}],"termid":"MOD:00796"}


id: PBO:0076209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 19","termid":"PBO:0076209"}


id: GO:1905567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport.","definition_xrefs":["GOC:TermGenie","PMID:22848640","GOC:nc","GO_REF:0000058","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport (obsolete GO:1905567)","synonyms":[{"name":"activation of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"narrow"},{"name":"positive regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"}],"termid":"GO:1905567"}


id: PR:Q10256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mud1 gene.","definition_xrefs":["UniProtKB:Q10256","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein mud1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.08","synonyms":[{"name":"DNA-damage-inducible protein DDI1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mud1","type":"exact"},{"name":"UBA domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10256"}


id: FYPO:0009066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amorolfine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to amorolfine","synonyms":[{"name":"resistance to amorolfine during mitotic cell cycle","type":"related"},{"name":"resistance to amorolfine during vegetative growth","type":"exact"},{"name":"resistant to amorolfine","type":"exact"}],"termid":"FYPO:0009066"}


id: GO:0030011
data:
  {"annotated_genes":["SJAG_03718","SJAG_01722","SJAG_00355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72146,73212,75083],"is_not":false,"summary":null,"term":"GO:0030011"}]},"cv_name":"biological_process","definition":"The maintenance of established anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_01722":null,"SJAG_03718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"maintenance of cell polarity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0030013","GO:0030469"],"termid":"GO:0030011","terms_by_termid":{"GO:0030011":null}}


id: PBO:0034086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-towards","termid":"PBO:0034086"}


id: GO:0160177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate which autophagosomes fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects).","definition_xrefs":["PMID:38360932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"positively_regulates","term_name":"autophagosome-lysosome fusion","termid":"GO:0061909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of autophagosome-lysosome fusion","termid":"GO:0160177"}


id: GO:0016768
data:
  {"annotated_genes":["SJAG_04481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104678],"is_not":false,"summary":null,"term":"GO:0016768"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosylmethioninamine + spermidine = 5'-methylthioadenosine + spermine.","definition_xrefs":["EC:2.5.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"spermine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SPERMINE-SYNTHASE-RXN","Reactome:R-HSA-351210","RHEA:19973"],"synonyms":[{"name":"S-adenosylmethioninamine:spermidine 3-aminopropyltransferase activity","type":"related"},{"name":"spermidine aminopropyltransferase activity","type":"related"},{"name":"spermine synthetase activity","type":"related"}],"termid":"GO:0016768","terms_by_termid":{"GO:0016768":null}}


id: PBO:0043028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 3","termid":"PBO:0043028"}


id: GO:0072153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a renal fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal interstitial fibroblast fate commitment","synonyms":[{"name":"kidney interstitial cell fate commitment","type":"exact"}],"termid":"GO:0072153"}


id: GO:0071102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to paxillin.","definition_xrefs":["PMID:12221126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha4-beta1 integrin-paxillin complex","synonyms":[{"name":"ITGA4-ITGB1-PXN complex","type":"narrow"}],"termid":"GO:0071102"}


id: PBO:0052962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 2","termid":"PBO:0052962"}


id: PBO:0113327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; added to genome annotation based on evolutionary, translation, and proteomics evidence","termid":"PBO:0113327"}


id: GO:0007558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of juvenile hormone secretion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"juvenile hormone secretion","termid":"GO:0045443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of juvenile hormone secretion","termid":"GO:0007558"}


id: PBO:0030010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substance_absent_from_cell","termid":"PBO:0030010"}


id: PBO:0070092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 6 pseudogene","termid":"PBO:0070092"}


id: FYPO:0001285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylethanolamine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphatidylethanolamine level","synonyms":[{"name":"decreased cellular PE level","type":"exact"},{"name":"decreased cellular phosphatidylethanolamine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylethanolamine level during vegetative growth","type":"exact"},{"name":"decreased phosphatidylethanolamine accumulation","type":"related"},{"name":"reduced cellular phosphatidylethanolamine level","type":"exact"}],"termid":"FYPO:0001285"}


id: PBO:0048913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member H","termid":"PBO:0048913"}


id: GO:1904228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glycogen synthase activity, transferring glucose-1-phosphate.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","GO_REF:0000059","PMID:17569761"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glycogen synthase activity, transferring glucose-1-phosphate (obsolete GO:1904228)","synonyms":[{"name":"activation of glycogen synthase activity, transferring glucose-1-phosphate","type":"narrow"},{"name":"up regulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"up-regulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"upregulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"}],"termid":"GO:1904228"}


id: GO:0004511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + tetrahydrobiopterin + O2 = 3,4-dihydroxy-L-phenylalanine + 4-alpha-hydroxytetrahydrobiopterin + H2O.","definition_xrefs":["EC:1.14.16.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tyrosine 3-monooxygenase activity","secondary_identifiers":["RHEA:18201","MetaCyc:TYROSINE-3-MONOOXYGENASE-RXN","Reactome:R-HSA-209823"],"synonyms":[{"name":"L-tyrosine hydroxylase activity","type":"related"},{"name":"L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"tyrosine 3-hydroxylase activity","type":"exact"},{"name":"tyrosine hydroxylase activity","type":"exact"}],"termid":"GO:0004511"}


id: GO:1905391
data:
  {"annotated_genes":["SJAG_02645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109912],"is_not":false,"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"Any regulation of protein localization to cell division site that is involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25411334","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site","termid":"GO:1901900"},{"relation_name":"part_of","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell division site involved in cell separation after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to cell division site involved in cell separation after cytokinesis","type":"exact"},{"name":"regulation of protein localisation to cell division site involved in cell separation following cytokinesis","type":"exact"},{"name":"regulation of protein localisation to cell division site involved in cytokinetic cell separation","type":"related"},{"name":"regulation of protein localisation to cell division site involved in mitotic cytokinetic cell separation","type":"exact"}],"termid":"GO:1905391","terms_by_termid":{"GO:1905391":null}}


id: MONDO:0016313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete renal cell carcinoma (obsolete MONDO:0016313)","termid":"MONDO:0016313","xrefs":{"Monarch":{"xref_id":"0016313"}}}


id: FYPO:0007637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromatin moves within the nucleus to a lower extent than normal.","definition_xrefs":["PMID:33434270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin mobility","synonyms":[{"name":"decreased chromatin mobility during mitotic cell cycle","type":"related"},{"name":"decreased chromatin mobility during vegetative growth","type":"exact"},{"name":"decreased chromatin motility","type":"exact"},{"name":"decreased chromatin movement","type":"exact"},{"name":"reduced chromatin mobility","type":"exact"}],"termid":"FYPO:0007637"}


id: PBO:0061301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural proliferation, differentiation and control 1","termid":"PBO:0061301"}


id: FYPO:0007883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cleavage-dependent termination of transcription by RNA polymerase II is abnormal. In cleavage-dependent termination, co-transcriptional secondary structure-dependent endonucleolytic cleavage triggers RNA polymerase II transcription termination; transcripts are not polyadenylated, and are subsequently rapidly degraded in the nucleus. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["PMID:34352089","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased termination of RNA polymerase II transcription","termid":"FYPO:0006613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cleavage-dependent termination of RNA polymerase II transcription","synonyms":[{"name":"decreased Pac1-dependent termination of RNA polymerase II transcription","type":"related"},{"name":"decreased cleavage-dependent RNA polymerase II transcription termination","type":"exact"},{"name":"decreased cleavage-dependent premature transcription termination","type":"narrow"},{"name":"decreased cleavage-dependent termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"decreased cleavage-dependent termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0007883"}


id: PBO:0084165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly-conserved N-terminally anchored AAA-ATPase; distributed in the mitochondrial outer membrane and peroxisomes; involved in mitochondrial protein sorting; functions as an extraction engine in local organelle surveillance to remove and initiate degradation of mistargeted proteins, ensuring fidelity of organelle-specific localization of tail-anchored proteins; contains an N-terminal transmembrane domain and C-terminal cytoplasmic ATPase domain","termid":"PBO:0084165"}


id: PBO:0062785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORAI calcium release-activated calcium modulator 3","termid":"PBO:0062785"}


id: PBO:0049007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein hormone subunit beta 5","termid":"PBO:0049007"}


id: PBO:0061829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-GlcNAcase","termid":"PBO:0061829"}


id: GO:0019120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid halide bond in substances containing halogen atoms in organic linkage.","definition_xrefs":["EC:3.8.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds","termid":"GO:0016824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}


id: MONDO:0007132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anonychia-ectrodactyly","secondary_identifiers":["MEDGEN:354849","MESH:C566277","UMLS:C1862843","OMIM:106900"],"synonyms":[{"name":"anonychia ectrodactyly","type":"related"},{"name":"anonychia-ectrodactyly","type":"exact"}],"termid":"MONDO:0007132","xrefs":{"Monarch":{"xref_id":"0007132"}}}


id: PBO:0042992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 5","termid":"PBO:0042992"}


id: MONDO:0006989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized collection of pus in the tissues that enclose the root of a tooth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periapical periodontitis","termid":"MONDO:0004508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppurative periapical periodontitis","secondary_identifiers":["EFO:1001202","MEDGEN:10652","MESH:D010482","NCIT:C34913","UMLS:C0031024","DOID:2562"],"synonyms":[{"name":"apical abscess","type":"exact"},{"name":"dentoalveolar abscess","type":"exact"},{"name":"periapical abscess","type":"exact"},{"name":"periapical dental abscess","type":"exact"},{"name":"suppurative apical periodontitis","type":"exact"}],"termid":"MONDO:0006989","xrefs":{"Monarch":{"xref_id":"0006989"}}}


id: MONDO:0017898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of mendelian susceptibility to mycobacterial diseases due to a partial deficiency.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency (obsolete MONDO:0017898)","secondary_identifiers":["Orphanet:319539"],"synonyms":[{"name":"autosomal recessive MSMD due to a partial deficiency","type":"exact"},{"name":"mendelian susceptibility to mycobacterial diseases due to a partial deficiency, autosomal recessive","type":"exact"}],"termid":"MONDO:0017898","xrefs":{"Monarch":{"xref_id":"0017898"}}}


id: PBO:0059166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPV17 mitochondrial inner membrane protein like","termid":"PBO:0059166"}


id: GO:0036288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ximelagatran stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ximelagatran","termid":"GO:0036288"}


id: GO:0002548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a monocyte in response to an external stimulus.","definition_xrefs":["PMID:11696603","GOC:add","PMID:15173832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte chemotaxis","termid":"GO:0002548"}


id: PBO:0039166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 9","termid":"PBO:0039166"}


id: FYPO:0007464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hypoxia is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during cellular response to hypoxia","synonyms":[{"name":"increased RNA accumulation during cellular response to hypoxia","type":"related"},{"name":"increased RNA level during cellular response to hyperoxic stress","type":"exact"},{"name":"increased RNA level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"increased RNA level during cellular response to increased oxygen tension","type":"exact"},{"name":"increased transcript level during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0007464"}


id: PBO:0071794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p40","termid":"PBO:0071794"}


id: PBO:0076168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 4","termid":"PBO:0076168"}


id: PBO:0046272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endomucin","termid":"PBO:0046272"}


id: PBO:0087833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiazole synthase; abundant protein involved in the formation of the thiazole moiety of thiamine during thiamine biosynthesis; acts more as a co-substrate rather than an enzyme by providing the sulphur source for thiazole formation; undergoes a single turnover only; required for mitochondrial genome stability in response to DNA damaging agents","termid":"PBO:0087833"}


id: GO:0050867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell activation","synonyms":[{"name":"activation of cell activation","type":"narrow"},{"name":"stimulation of cell activation","type":"narrow"},{"name":"up regulation of cell activation","type":"exact"},{"name":"up-regulation of cell activation","type":"exact"},{"name":"upregulation of cell activation","type":"exact"}],"termid":"GO:0050867"}


id: PBO:0050644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietic SH2 domain containing","termid":"PBO:0050644"}


id: GO:2000031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salicylic acid mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of salicylic acid mediated signaling pathway","synonyms":[{"name":"regulation of salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:2000031"}


id: PBO:0030879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_component_assembly_during_vegetative_growth","termid":"PBO:0030879"}


id: GO:0070493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by thrombin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:1672265","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"thrombin-activated receptor signaling pathway","synonyms":[{"name":"thrombin receptor signaling pathway","type":"exact"},{"name":"thrombin receptor signalling pathway","type":"exact"}],"termid":"GO:0070493"}


id: GO:0006223
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93830],"is_not":false,"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates uracil, 2,4-dioxopyrimidine, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase salvage","termid":"GO:0043100"},{"relation_name":"is_a","term_name":"uracil biosynthetic process","termid":"GO:0046107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"uracil salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006223","terms_by_termid":{"GO:0006223":null}}


id: PBO:0066012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanine-7 methyltransferase activating subunit","termid":"PBO:0066012"}


id: PBO:0036516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4","termid":"PBO:0036516"}


id: PBO:0000985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase (predicted)","termid":"PBO:0000985"}


id: MONDO:0044885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adipose tissue neoplasm of the tonsils.","definition_xrefs":["NCIT:C5989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of tonsil","termid":"MONDO:0021513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"tonsillar lipoma","secondary_identifiers":["MEDGEN:234431","UMLS:C1336764"],"synonyms":[{"name":"lipoma of the tonsil","type":"exact"},{"name":"lipoma of tonsil","type":"exact"},{"name":"tonsil lipoma","type":"exact"},{"name":"tonsillar lipoma","type":"exact"}],"termid":"MONDO:0044885","xrefs":{"Monarch":{"xref_id":"0044885"}}}


id: PBO:0079737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 2B","termid":"PBO:0079737"}


id: PBO:0070515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 14","termid":"PBO:0070515"}


id: PBO:0031815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_autophagy","termid":"PBO:0031815"}


id: MONDO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the bronchus","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"bronchial neoplasm","termid":"MONDO:0002807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bronchus cancer","secondary_identifiers":["ICD9:162.9","MEDGEN:730206","UMLS:C1322284","ICD9:162.8","DOID:1325","SCTID:363493006","NCIT:C156885"],"synonyms":[{"name":"bronchus cancer","type":"exact"},{"name":"cancer of bronchus","type":"exact"},{"name":"malignant bronchus neoplasm","type":"exact"},{"name":"malignant neoplasm of bronchus","type":"exact"},{"name":"malignant neoplasm of bronchus and lung","type":"narrow"},{"name":"malignant neoplasm of bronchus and lung, unspecified","type":"narrow"},{"name":"malignant neoplasm of bronchus or lung","type":"related"}],"termid":"MONDO:0001672","xrefs":{"Monarch":{"xref_id":"0001672"}}}


id: PBO:0012295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit Spt16","termid":"PBO:0012295"}


id: PR:O94247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-binding protein SMUBP-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10887:SF23","OMA:SCHPO04870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.07c","secondary_identifiers":["UniProtKB:O94247"],"synonyms":[{"name":"Spom972h-IGHMBP2","type":"exact"}],"termid":"PR:O94247"}


id: PBO:0040707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 12 pseudogene 1","termid":"PBO:0040707"}


id: PBO:0075309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5 pseudogene 1","termid":"PBO:0075309"}


id: GO:1903064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of reverse cholesterol transport.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:23931754","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"is_a","term_name":"regulation of reverse cholesterol transport","termid":"GO:1903062"},{"relation_name":"positively_regulates","term_name":"reverse cholesterol transport","termid":"GO:0043691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of reverse cholesterol transport","synonyms":[{"name":"activation of reverse cholesterol transport","type":"narrow"},{"name":"up regulation of reverse cholesterol transport","type":"exact"},{"name":"up-regulation of reverse cholesterol transport","type":"exact"},{"name":"upregulation of reverse cholesterol transport","type":"exact"}],"termid":"GO:1903064"}


id: PBO:0002699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small histone ubiquitination factor Shf1","termid":"PBO:0002699"}


id: MONDO:0054849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 29","secondary_identifiers":["MEDGEN:1648318","UMLS:C4748083","OMIM:618077","DOID:0112155"],"synonyms":[{"name":"IBD29","type":"related"},{"name":"inflammatory bowel disease 29","type":"exact"}],"termid":"MONDO:0054849","xrefs":{"Monarch":{"xref_id":"0054849"}}}


id: PBO:0073947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC20A1 divergent transcript","termid":"PBO:0073947"}


id: PBO:0073612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIAH2 antisense RNA 1","termid":"PBO:0073612"}


id: MONDO:0016081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coronary arterial fistulas are a connection between one or more of the coronary arteries and a cardiac chamber or great vessel.","definition_xrefs":["Orphanet:2041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary arterial fistulas","secondary_identifiers":["GARD:1533","MEDGEN:488822","UMLS:C0265898","NANDO:2200296","MedDRA:10069441"],"synonyms":[{"name":"Coronaro-cardiac fistula","type":"exact"},{"name":"coronary arterial malformations","type":"exact"}],"termid":"MONDO:0016081","xrefs":{"Monarch":{"xref_id":"0016081"}}}


id: GO:0004794
data:
  {"annotated_genes":["SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79276],"is_not":false,"summary":null,"term":"GO:0004794"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine = 2-oxobutanoate + NH4.","definition_xrefs":["EC:4.3.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"threonine deaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["UM-BBD_reactionID:r0433","MetaCyc:THREDEHYD-RXN","Reactome:R-HSA-9014627","RHEA:22108"],"synonyms":[{"name":"L-serine dehydratase activity","type":"related"},{"name":"L-threonine ammonia-lyase (2-oxobutanoate-forming)","type":"exact"},{"name":"L-threonine ammonia-lyase activity","type":"exact"},{"name":"L-threonine deaminase activity","type":"exact"},{"name":"L-threonine dehydratase activity","type":"exact"},{"name":"L-threonine hydro-lyase (deaminating) activity","type":"related"},{"name":"serine deaminase activity","type":"related"},{"name":"threonine ammonia-lyase activity","type":"broad"},{"name":"threonine dehydrase activity","type":"exact"},{"name":"threonine dehydratase activity","type":"broad"}],"termid":"GO:0004794","terms_by_termid":{"GO:0004794":null}}


id: FYPO:0003549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during one or both meiotic nuclear divisions. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization during meiosis","synonyms":[{"name":"abnormal cellular protein localisation during meiosis","type":"exact"},{"name":"abnormal cellular protein localization during meiosis","type":"exact"},{"name":"abnormal protein localisation during meiosis","type":"exact"},{"name":"abnormal protein localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003549"}


id: MONDO:0017830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe Canavan disease (CD) is a rapidly progressing neurodegenerative disorder characterized by leukodystrophy with macrocephaly, severe developmental delay and hypotonia.","definition_xrefs":["Orphanet:314911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Canavan disease","termid":"MONDO:0010079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"severe Canavan disease","secondary_identifiers":["MEDGEN:1826002","UMLS:C5575558","GARD:17437"],"synonyms":[{"name":"infantile Canavan disease","type":"exact"},{"name":"neonatal Canavan disease","type":"exact"}],"termid":"MONDO:0017830","xrefs":{"Monarch":{"xref_id":"0017830"}}}


id: PBO:0057736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1324","termid":"PBO:0057736"}


id: GO:0005457
data:
  {"annotated_genes":["SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95202],"is_not":false,"summary":null,"term":"GO:0005457"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a GDP-fucose from one side of a membrane to the other. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide-sugar transmembrane transporter activity","termid":"GO:0036080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"GDP-fucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-742345","Reactome:R-HSA-5653596"],"termid":"GO:0005457","terms_by_termid":{"GO:0005457":null}}


id: GO:0099047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense process that protects an organism from invading foreign RNA.","definition_xrefs":["GO:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clearance of foreign intracellular nucleic acids","termid":"GO:0099046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of foreign intracellular RNA","termid":"GO:0099047"}


id: PBO:0060300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 10","termid":"PBO:0060300"}


id: GO:0048662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of smooth muscle cell proliferation.","definition_xrefs":["CL:0000192","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell proliferation","termid":"GO:0048660"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell proliferation","synonyms":[{"name":"down regulation of smooth muscle cell proliferation","type":"exact"},{"name":"down-regulation of smooth muscle cell proliferation","type":"exact"},{"name":"downregulation of smooth muscle cell proliferation","type":"exact"},{"name":"inhibition of smooth muscle cell proliferation","type":"narrow"},{"name":"negative regulation of SMC proliferation","type":"exact"}],"termid":"GO:0048662"}


id: GO:1901252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of egress of virus within host cell.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular transport of viral material","synonyms":[{"name":"regulation of egress of virus within host cell","type":"related"},{"name":"regulation of movement of virus within host cell","type":"exact"},{"name":"regulation of viral egress","type":"exact"}],"termid":"GO:1901252"}


id: PR:Q4ZGE2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3D6.16 gene.","definition_xrefs":["UniProtKB:Q4ZGE2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3D6.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.16","synonyms":[{"name":"Spom972h-SPBC3D6.16","type":"exact"}],"termid":"PR:Q4ZGE2"}


id: PBO:0116224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein, human TAPT1 ortholog","termid":"PBO:0116224"}


id: PBO:0060872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member E","termid":"PBO:0060872"}


id: PBO:0073258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 2","termid":"PBO:0073258"}


id: GO:0021920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of neuronal precursors to association neurons in the dorsal spinal cord.","definition_xrefs":["GOC:cls","PMID:12593981","GOC:dph","GOC:dgh","GO_REF:0000021","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification (obsolete GO:0021920)","termid":"GO:0021920"}


id: PBO:0001339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF185 protein, mitochondrial","termid":"PBO:0001339"}


id: PR:P40373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01785","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.05c","secondary_identifiers":["UniProtKB:P40373"],"synonyms":[{"name":"ATP-PRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-PRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hisG","type":"exact"}],"termid":"PR:P40373"}


id: MONDO:1010803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly, non-human animal","termid":"MONDO:1010156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, rabbit","secondary_identifiers":["OMIA:000146-9986"],"termid":"MONDO:1010803","xrefs":{"Monarch":{"xref_id":"1010803"}}}


id: PBO:0113468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC1 and TORC2 involved in TOR signaling; TORC1 regulates nutrient responsive growth and TORC2 regulates plasma membrane (PM) homeostasis and cell-cycle dependent actin cytoskeleton polarization; negative regulator of Rtg1p/3p and Gln3p transcription factors and amino acid biosynthesis; binds to both Tor1p and Tor2p, regulating the integrity and kinase activity of TORC2; PM retention is dependent on Avo3p; WD-repeat protein","termid":"PBO:0113468"}


id: MONDO:0018779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypercontractile muscle stiffness syndrome (obsolete MONDO:0018779)","secondary_identifiers":["Orphanet:476403"],"termid":"MONDO:0018779","xrefs":{"Monarch":{"xref_id":"0018779"}}}


id: PBO:0071006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 8","termid":"PBO:0071006"}


id: GO:0042954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids, into, out of or within a cell, or between cells.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein transporter activity (obsolete GO:0042954)","termid":"GO:0042954"}


id: PATO:0001385
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing a non-integral multiple of the monoploid number, due to extra or missing chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Aneuploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ploidy","termid":"PATO:0001374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneuploid","termid":"PATO:0001385"}


id: GO:0015189
data:
  {"annotated_genes":["SJAG_03256","SJAG_03400","SJAG_04725","SJAG_02029","SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80941,99250,102269,104726,112002],"is_not":false,"summary":null,"term":"GO:0015189"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-lysine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005293"],"synonyms":[{"name":"L-lysine permease","type":"related"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"},{"name":"lysine permease activity","type":"related"}],"termid":"GO:0015189","terms_by_termid":{"GO:0015189":null}}


id: PBO:0051584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18 binding protein","termid":"PBO:0051584"}


id: PR:O13782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cpp1 gene.","definition_xrefs":["UniProtKB:O13782","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein farnesyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.04c","synonyms":[{"name":"CAAX farnesyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FTase-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cpp1","type":"exact"},{"name":"ras proteins prenyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13782"}


id: FYPO:0003541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to spindle pole body","termid":"FYPO:0001836"},{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole body","synonyms":[{"name":"normal protein localisation to meiotic spindle pole body","type":"exact"},{"name":"normal protein localization to meiotic SPB","type":"exact"}],"termid":"FYPO:0003541"}


id: PBO:0048088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 9","termid":"PBO:0048088"}


id: PBO:0066963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 265","termid":"PBO:0066963"}


id: PBO:0089802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane vitamin H transmembrane transporter Vht1","termid":"PBO:0089802"}


id: GO:0000456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Dimethylation of the N6 amino groups of two consecutive adenosine residues near the 3'-end of the SSU rRNA. This process has been conserved from bacteria to eukaryotes.","definition_xrefs":["GOC:tb","ISBN:1555811337","GOC:curators","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylation involved in SSU-rRNA maturation (obsolete GO:0000456)","termid":"GO:0000456"}


id: PBO:0039354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylmethionine decarboxylase 1 pseudogene 4","termid":"PBO:0039354"}


id: GO:1902921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(hydroxyvalerate).","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:21705209","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) biosynthetic process","termid":"GO:1901441"},{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) metabolic process","termid":"GO:1902920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyvalerate) biosynthetic process","synonyms":[{"name":"poly(hydroxyvalerate) anabolism","type":"exact"},{"name":"poly(hydroxyvalerate) biosynthesis","type":"exact"},{"name":"poly(hydroxyvalerate) formation","type":"exact"},{"name":"poly(hydroxyvalerate) synthesis","type":"exact"}],"termid":"GO:1902921"}


id: GO:0120511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl (2E,6E)-farnesoate + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + juvenile hormone III + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:23586995","PMID:38741075","RHEA:43728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methyl farnesoate epoxidase activity","secondary_identifiers":["MetaCyc:RXN-11621","EC:1.14.14.127"],"synonyms":[{"name":"CYP15A1 activity","type":"related"}],"termid":"GO:0120511"}


id: MONDO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"toxic epidermal necrolysis","termid":"MONDO:0019810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Stevens-Johnson syndrome/toxic epidermal necrolysis overlap syndrome","secondary_identifiers":["icd11.foundation:496418968","UMLS:C3661878","Orphanet:506784","GARD:22066","MEDGEN:783034"],"synonyms":[{"name":"SJS/TEN overlap syndrome","type":"exact"},{"name":"Stevens-Johnson/TEN overlap syndrome","type":"exact"},{"name":"Stevens-Johnson/toxic epidermal necrolysis overlap syndrome","type":"exact"}],"termid":"MONDO:0044739","xrefs":{"Monarch":{"xref_id":"0044739"}}}


id: PBO:0073829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 6","termid":"PBO:0073829"}


id: GO:0033326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of cerebrospinal fluid (CSF) from the choroid plexus of the lateral, third and fourth ventricles. The cerebrospinal fluid is a clear liquid that located within the ventricles, spinal canal, and subarachnoid spaces.","definition_xrefs":["PMID:10716451","GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cerebrospinal fluid secretion","synonyms":[{"name":"CSF secretion","type":"exact"}],"termid":"GO:0033326"}


id: MONDO:0001198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of thrombocytopenia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia","termid":"MONDO:0002049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired thrombocytopenia","secondary_identifiers":["SCTID:74576004","DOID:11126","MEDGEN:509570","ICD9:287.4","UMLS:C0154301","icd11.foundation:526155201"],"synonyms":[{"name":"acquired thrombocytopenia","type":"exact"},{"name":"secondary thrombocytopenia","type":"exact"}],"termid":"MONDO:0001198","xrefs":{"Monarch":{"xref_id":"0001198"}}}


id: GO:0000948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process via Ehrlich pathway","termid":"GO:0000955"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"}


id: PBO:0066429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like estrogen regulated growth inhibitor","termid":"PBO:0066429"}


id: GO:0060303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the number of nucleosomes in a given region of a chromosome.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nucleosome density (obsolete GO:0060303)","termid":"GO:0060303"}


id: PBO:0079567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated and SH3 domain containing B","termid":"PBO:0079567"}


id: PBO:0050056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, W (pseudogene)","termid":"PBO:0050056"}


id: PBO:0054505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1905","termid":"PBO:0054505"}


id: PBO:0005332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human Leydig cell tumor 10 kDa protein homolog","termid":"PBO:0005332"}


id: PBO:0110430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VTCN1 pseudogene 1","termid":"PBO:0110430"}


id: PBO:0056820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD12 antisense RNA 1","termid":"PBO:0056820"}


id: MONDO:0006285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from a pleomorphic adenoma in the major salivary glands. It usually originates in the parotid gland. Patients usually present with a history of a long-standing tumor mass which grew rapidly in the past few months. Patients with non-invasive or minimally invasive carcinoma have an excellent prognosis. In cases where there is invasion of the surrounding tissues, the clinical course is aggressive.","definition_xrefs":["NCIT:C5975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"major salivary gland carcinoma","termid":"MONDO:0006284"},{"relation_name":"is_a","term_name":"salivary gland carcinoma ex pleomorphic adenoma","termid":"MONDO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"major salivary gland carcinoma ex pleomorphic adenoma","secondary_identifiers":["EFO:1000345","MEDGEN:233655","UMLS:C1334550"],"synonyms":[{"name":"carcinoma ex pleomorphic adenoma of Major salivary gland","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma of the Major salivary gland","type":"exact"},{"name":"major salivary gland carcinoma ex pleomorphic adenoma","type":"exact"},{"name":"major salivary gland salivary gland carcinoma ex pleomorphic adenoma","type":"exact"}],"termid":"MONDO:0006285","xrefs":{"Monarch":{"xref_id":"0006285"}}}


id: MONDO:0007602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete favism, susceptibility to (obsolete MONDO:0007602)","secondary_identifiers":["OMIM:134700"],"synonyms":[{"name":"favism, susceptibility to","type":"exact"},{"name":"moved to {300908}","type":"related"}],"termid":"MONDO:0007602","xrefs":{"Monarch":{"xref_id":"0007602"}}}


id: MOD:00186
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes an L-tyrosine residue with 3',3'',5'-triiodo-L-thyronine.","definition_xrefs":["ChEBI:18258","Unimod:397","DeltaMass:0","RESID:AA0177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triiodinated residue","termid":"MOD:00502"},{"relation_name":"is_a","term_name":"iodinated tyrosine","termid":"MOD:00998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',3'',5'-triiodo-L-thyronine","synonyms":[{"name":"(S)-2-amino-3-[4-(4-hydroxy-3-iodophenoxy)-3,5-diiodophenyl]propanoic acid","type":"exact"},{"name":"3',3'',5'-triiodo-L-thyronine","type":"exact"},{"name":"3,3',5-triiodo-L-thyronine","type":"exact"},{"name":"3,5,3'-Triiodothyronine (from Tyrosine)","type":"exact"},{"name":"3,5,3'-triiodo-L-thyronine","type":"exact"},{"name":"4-(4-hydroxy-3-iodophenoxy)-3,5-diiodo-L-phenylalanine","type":"exact"},{"name":"I3Thy","type":"exact"},{"name":"MOD_RES Triiodothyronine","type":"exact"},{"name":"O-(4-hydroxy-3-iodophenyl)-3,5-diiodo-L-tyrosine","type":"exact"},{"name":"T3","type":"exact"},{"name":"Triiodothyronine","type":"related"},{"name":"liothyronine","type":"exact"},{"name":"triiodo","type":"related"}],"termid":"MOD:00186"}


id: GO:0060244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of cell proliferation in response to cell density.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"part_of","term_name":"contact inhibition","termid":"GO:0060242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in contact inhibition","termid":"GO:0060244"}


id: MONDO:0021574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 3","secondary_identifiers":["OMIM:617712","MEDGEN:1617317","UMLS:C4540205"],"synonyms":[{"name":"OOMD3","type":"exact"},{"name":"oocyte maturation defect 3","type":"exact"}],"termid":"MONDO:0021574","xrefs":{"Monarch":{"xref_id":"0021574"}}}


id: PBO:0045181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B2","termid":"PBO:0045181"}


id: PBO:0051868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISL LIM homeobox 1","termid":"PBO:0051868"}


id: PBO:0076692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCEAL8 pseudogene 1","termid":"PBO:0076692"}


id: PATO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having a spindle-like shape that is wide in the middle and tapers at both ends.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle-shaped","termid":"PATO:0001409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusiform","termid":"PATO:0002400"}


id: GO:0047648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methylhexanamide + H2O = hexanoate + methylammonium.","definition_xrefs":["RHEA:20081","EC:3.5.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"alkylamidase activity","secondary_identifiers":["KEGG_REACTION:R03620","MetaCyc:ALKYLAMIDASE-RXN"],"synonyms":[{"name":"N-methylhexanamide amidohydrolase activity","type":"related"}],"termid":"GO:0047648"}


id: PBO:0055126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2545","termid":"PBO:0055126"}


id: GO:0010824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of centrosome duplication. Centrosome duplication is the replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome cycle","termid":"GO:0046605"},{"relation_name":"regulates","term_name":"centrosome duplication","termid":"GO:0051298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of centrosome duplication","termid":"GO:0010824"}


id: PBO:0040866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMAL2 antisense RNA 1","termid":"PBO:0040866"}


id: GO:0009127
data:
  {"annotated_genes":["SJAG_00044","SJAG_01661","SJAG_01859","SJAG_04634","SJAG_02364","SJAG_01081","SJAG_03355","SJAG_01814","SJAG_04123","SJAG_03140","SJAG_02850","SJAG_04681","SJAG_00964","SJAG_01070","SJAG_06634","SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78775,80769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[66782,71679,73363,57122,65406,78550,60495,58263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[75717,57274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[63869,59782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[77427,103107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[77428,65925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[77429,110233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleoside monophosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate biosynthetic process","termid":"GO:0009124"},{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine nucleoside monophosphate anabolism","type":"exact"},{"name":"purine nucleoside monophosphate biosynthesis","type":"exact"},{"name":"purine nucleoside monophosphate formation","type":"exact"},{"name":"purine nucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009127","terms_by_termid":{"GO:0006177":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null}}


id: MONDO:1010680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in cheetah.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, cheetah","secondary_identifiers":["OMIA:000038-32536"],"termid":"MONDO:1010680","xrefs":{"Monarch":{"xref_id":"1010680"}}}


id: MONDO:0003180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A adenoid cystic carcinoma that involves the skin of body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"sweat gland carcinoma","termid":"MONDO:0005524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"cutaneous adenocystic carcinoma","secondary_identifiers":["DOID:4871","NCIT:C4471","SCTID:254711000","UMLS:C0346017","MEDGEN:91071"],"synonyms":[{"name":"adenoid cystic eccrine carcinoma of skin","type":"exact"},{"name":"adenoid cystic skin carcinoma","type":"exact"},{"name":"primary cutaneous adenocystic carcinoma","type":"exact"},{"name":"skin of body adenoid cystic carcinoma","type":"exact"},{"name":"adenoid cystic carcinoma of skin","type":"exact"},{"name":"adenoid cystic carcinoma of the skin","type":"exact"},{"name":"adenoid cystic cutaneous carcinoma","type":"exact"},{"name":"adenoid cystic eccrine carcinoma","type":"exact"},{"name":"adenoid cystic eccrine carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003180","xrefs":{"Monarch":{"xref_id":"0003180"}}}


id: GO:0043487
data:
  {"annotated_genes":["SJAG_03113","SJAG_01818","SJAG_00797","SJAG_02540","SJAG_00285","SJAG_04407","SJAG_03157","SJAG_05010","SJAG_00759","SJAG_00854","SJAG_00966","SJAG_04946","SJAG_04825","SJAG_03883","SJAG_03696","SJAG_03876","SJAG_04350","SJAG_01625","SJAG_01910","SJAG_01944","SJAG_04880","SJAG_02622","SJAG_02370","SJAG_01053","SJAG_01191","SJAG_03283","SJAG_01521","SJAG_04118","SJAG_05694","SJAG_02213","SJAG_04818","SJAG_04824","SJAG_05014","SJAG_02036","SJAG_00343","SJAG_00670","SJAG_00391","SJAG_03597","SJAG_04586","SJAG_01696","SJAG_02383","SJAG_04321","SJAG_04006","SJAG_04153","SJAG_16457","SJAG_03886","SJAG_03745","SJAG_02239","SJAG_03179","SJAG_00686","SJAG_04084","SJAG_02808","SJAG_02573","SJAG_05322"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[80524,92035,102001,80564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[113987,77588,79362,81430,58789,76187],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[120131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[91330,72388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[93529],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[120332,99135,107201,103998,117888,97797,94106,108416,106331,109411,117448,94938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[100035,81455,99948,72356,101834,117147,78405,60378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[118610,75458,72001,97390,81558,96199,94460,117663,80606,91631,79504,92630,94363,77268],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[93530],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[119241,67858,92631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[90241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043488"},{"annotations":[91645,92038,93380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000815"},{"annotations":[92483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that modulates the propensity of RNA molecules to degradation. Includes processes that both stabilize and destabilize RNAs.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"post-transcriptional regulation of gene expression","termid":"GO:0010608"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"regulates","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00670":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00797":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01696":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02622":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03283":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04586":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_04946":null,"SJAG_05010":null,"SJAG_05014":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of RNA stability","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0043487","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0043488":null,"GO:0048255":null,"GO:0060212":null,"GO:0061157":null,"GO:0061158":null,"GO:0070935":null,"GO:0071042":null,"GO:0090669":null,"GO:1990074":null,"GO:2000815":null}}


id: MONDO:0033900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare capillary malformation with associated anomalies (obsolete MONDO:0033900)","termid":"MONDO:0033900","xrefs":{"Monarch":{"xref_id":"0033900"}}}


id: PBO:0072064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 2","termid":"PBO:0072064"}


id: MOD:01971
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N2-ornithine.","definition_xrefs":["RESID:AA0613","PubMed:23434852","ChEBI:136763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl N2-ornithine","synonyms":[{"name":"(2S)-5-amino-2-([(4S)-4-amino-4-carboxybutanoyl]amino)pentanoic acid","type":"exact"},{"name":"(2S)-5-amino-2-[(4S)-4-amino-4-carboxybutanamido]pentanoic acid","type":"exact"},{"name":"4-amino-5-[(4-amino-1-carboxy-butyl)amino]-5-ketovaleric acid","type":"exact"},{"name":"4-amino-5-[(4-amino-1-carboxy-butyl)amino]-5-oxopentanoic acid","type":"exact"},{"name":"5-glutamyl N2-ornithine","type":"exact"},{"name":"MOD_RES 5-glutamyl N2-ornithine","type":"exact"},{"name":"N2-(L-isoglutamyl)-L-ornithine","type":"exact"},{"name":"N2-(gamma-glutamyl)ornithine","type":"exact"},{"name":"gamma-glutamylornithine","type":"exact"}],"termid":"MOD:01971"}


id: GO:0051566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanidin 3-glucoside + UDP-rhamnose = anthocyanidin 3-rutinoside + UDP.","definition_xrefs":["PMID:8130800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"anthocyanidin 3-glucoside rhamnosyltransferase activity","synonyms":[{"name":"3RT activity","type":"broad"},{"name":"anthocyanidin 3-glucoside-rhamnosyltransferase activity","type":"exact"}],"termid":"GO:0051566"}


id: MONDO:0013867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brown-Vialetto-van Laere syndrome in which the cause of the disease is a mutation in the SLC52A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin transporter deficiency","termid":"MONDO:0008891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Brown-Vialetto-van Laere syndrome 2","secondary_identifiers":["GARD:12861","HGNC:30224","DOID:0080786","OMIM:614707","MEDGEN:766452","NCIT:C183529","Orphanet:572550","UMLS:C3553538"],"synonyms":[{"name":"BVVLS2","type":"exact"},{"name":"Brown-Vialetto-Van Laere syndrome type 2","type":"exact"},{"name":"Brown-Vialetto-van Laere syndrome 2","type":"exact"},{"name":"Brown-Vialetto-van Laere syndrome caused by mutation in SLC52A2","type":"exact"},{"name":"SLC52A2 Brown-Vialetto-van Laere syndrome","type":"exact"}],"termid":"MONDO:0013867","xrefs":{"Monarch":{"xref_id":"0013867"}}}


id: PBO:0039237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-aminolevulinate synthase 2","termid":"PBO:0039237"}


id: GO:0044219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one host cell to that of an adjacent host cell.","definition_xrefs":["GOC:rph","PMID:16903353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell junction","termid":"GO:0044156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell plasmodesma","termid":"GO:0044219"}


id: GO:0072037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephron. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"}


id: PBO:0002599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 complex subunit (predicted)","termid":"PBO:0002599"}


id: PBO:0040444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8B5, pseudogene","termid":"PBO:0040444"}


id: MONDO:0008079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromatosis-pheochromocytoma-duodenal carcinoid syndrome","secondary_identifiers":["UMLS:C1834232","MEDGEN:331696","OMIM:162240","MESH:C563522"],"synonyms":[{"name":"Npdc syndrome","type":"related"},{"name":"duodenal carcinoid syndrome","type":"related"},{"name":"neurofibromatosis-pheochromocytoma-duodenal carcinoid syndrome","type":"exact"}],"termid":"MONDO:0008079","xrefs":{"Monarch":{"xref_id":"0008079"}}}


id: SO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contiguous cluster of translocations, usually the result of a single catastrophic event such as chromothripsis or chromoanasynthesis.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex_structural_alteration","termid":"SO:0001784"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_chromosomal_rearrangement","synonyms":[{"name":"complex chromosomal rearrangement","type":"exact"}],"termid":"SO:0002062"}


id: PBO:0002191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, shugoshin Sgo2","termid":"PBO:0002191"}


id: PBO:0064724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 60","termid":"PBO:0064724"}


id: GO:0010581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An process which modulate the frequency, rate or extent of starch biosynthesis, the chemical reactions and pathways resulting in the formation of starch.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"regulates","term_name":"starch biosynthetic process","termid":"GO:0019252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of starch biosynthetic process","termid":"GO:0010581"}


id: PBO:0040401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 2","termid":"PBO:0040401"}


id: SO:0000090
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from plastid sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"plastid_sequence","termid":"SO:0000740"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_gene","synonyms":[{"name":"plastid gene","type":"exact"}],"termid":"SO:0000090"}


id: PBO:0091779
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morphological and kinase-inhibitor super-sensitive","termid":"PBO:0091779"}


id: PBO:0042242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 5","termid":"PBO:0042242"}


id: GO:0140466
data:
  {"annotated_genes":["SJAG_02457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91117],"is_not":false,"summary":null,"term":"GO:0140466"}]},"cv_name":"biological_process","definition":"The directed movement of iron sulfur clusters from inside the mitochondrion into the cytosol by crossing the inner mitochondrial membrane.","definition_xrefs":["PMID:31040179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster transmembrane transport","termid":"GO:1902497"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"iron-sulfur cluster export from the mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140466","terms_by_termid":{"GO:0140466":null}}


id: MONDO:0008277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that arises from the stomach. This category includes neoplastic polyps (intestinal-type adenomatous polyps, gastric-type adenomas, and fundic gland polyps), and non-neoplastic polyps (hyperplastic polyps and hamartomatous polyps).","definition_xrefs":["NCIT:C3954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"stomach polyp","secondary_identifiers":["UMLS:C0236048","MEDGEN:68629","MESH:C562464","SCTID:87252009"],"synonyms":[{"name":"gastric polyp","type":"exact"},{"name":"gastric polyposa","type":"exact"},{"name":"gastric polyposis","type":"related"},{"name":"polyps of stomach","type":"exact"},{"name":"polyps of the stomach","type":"exact"}],"termid":"MONDO:0008277","xrefs":{"Monarch":{"xref_id":"0008277"}}}


id: PBO:0045475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal root ganglia homeobox","termid":"PBO:0045475"}


id: GO:0002896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of central B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of central tolerance induction","termid":"GO:0002647"},{"relation_name":"is_a","term_name":"negative regulation of B cell tolerance induction","termid":"GO:0002662"},{"relation_name":"is_a","term_name":"regulation of central B cell tolerance induction","termid":"GO:0002895"},{"relation_name":"negatively_regulates","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of central B cell tolerance induction","synonyms":[{"name":"down regulation of central B cell tolerance induction","type":"exact"},{"name":"down-regulation of central B cell tolerance induction","type":"exact"},{"name":"downregulation of central B cell tolerance induction","type":"exact"},{"name":"inhibition of central B cell tolerance induction","type":"narrow"}],"termid":"GO:0002896"}


id: MONDO:0024307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"prothrombin deficiency","secondary_identifiers":["MEDGEN:1651913","UMLS:C4722227"],"termid":"MONDO:0024307","xrefs":{"Monarch":{"xref_id":"0024307"}}}


id: MONDO:0012266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any preeclampsia in which the cause of the disease is a mutation in the STOX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preeclampsia","termid":"MONDO:0005081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preeclampsia/eclampsia 4","secondary_identifiers":["UMLS:C1836255","MEDGEN:322874","MESH:C563724","GARD:18392","OMIM:609404"],"synonyms":[{"name":"PEE4","type":"related"},{"name":"PREECLAMPSIA/eclampsia 4","type":"related"},{"name":"Preeclampsia/eclampsia type 4","type":"exact"},{"name":"STOX1 preeclampsia","type":"exact"},{"name":"preeclampsia caused by mutation in STOX1","type":"exact"},{"name":"preeclampsia/eclampsia 4","type":"exact"}],"termid":"MONDO:0012266","xrefs":{"Monarch":{"xref_id":"0012266"}}}


id: PBO:0055700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLP homolog, long-term synaptic facilitation factor","termid":"PBO:0055700"}


id: MONDO:0011373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"urinary tract infection","termid":"MONDO:0100338"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary tract infections, recurrent, susceptibility to","secondary_identifiers":["MEDGEN:350196","OMIM:603806","UMLS:C1863514"],"synonyms":[{"name":"urinary tract infections, recurrent, susceptibility to","type":"exact"}],"termid":"MONDO:0011373","xrefs":{"Monarch":{"xref_id":"0011373"}}}


id: MONDO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant soft tissue neoplasm that occurs primarily in the pancreas.","definition_xrefs":["NCIT:C5715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pancreatic neoplasm","termid":"MONDO:0009831"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreas sarcoma","secondary_identifiers":["UMLS:C1096346","DOID:1796","MEDGEN:202112"],"synonyms":[{"name":"pancreas sarcoma","type":"exact"},{"name":"pancreatic sarcoma","type":"exact"},{"name":"sarcoma of pancreas","type":"exact"},{"name":"sarcoma of the pancreas","type":"exact"}],"termid":"MONDO:0002117","xrefs":{"Monarch":{"xref_id":"0002117"}}}


id: MONDO:0850812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary immunodeficiency disease characterized by impaired function or reduced numbers of dendritic cells.","definition_xrefs":["DOID:0111963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"dendritic cell deficiency","secondary_identifiers":["UMLS:C4746814","MEDGEN:1656300"],"termid":"MONDO:0850812","xrefs":{"Monarch":{"xref_id":"0850812"}}}


id: MOD:00140
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phycocyanobilin.","definition_xrefs":["PubMed:3838747","PubMed:16644722","ChEBI:15617","DeltaMass:0","PubMed:7918400","PubMed:3208761","Unimod:387#C","RESID:AA0131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-phycocyanobilin-L-cysteine","synonyms":[{"name":"(2R,3R)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-18-ethyl-1,2,3,19,21,22,24-heptahydro-2,7,13,17-tetramethyl-1,19-dioxo-(21H,22H,24H)-bilin-8,12-dipropanoic acid","type":"exact"},{"name":"(2R,3R)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-18-ethyl-2,7,13,17-tetramethyl-1,2,3,19,21,22,24-heptahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"BINDING Phycocyanobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"PCB","type":"exact"},{"name":"Phycocyanobilin","type":"related"},{"name":"S-Phycocyanobilin (on Cysteine)","type":"exact"},{"name":"S-phycocyanobilin-L-cysteine","type":"exact"},{"name":"phycobilin cysteine","type":"exact"},{"name":"phycocyanobilin","type":"related"},{"name":"phycocyanobilin cysteine adduct","type":"exact"}],"termid":"MOD:00140"}


id: PBO:0029327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_during_mitotic_S_phase","termid":"PBO:0029327"}


id: PBO:0002445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7SL signal recognition particle component","termid":"PBO:0002445"}


id: PBO:0050216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 33","termid":"PBO:0050216"}


id: PBO:0109115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 9, His-X-His N1(pi)-histidine","termid":"PBO:0109115"}


id: MONDO:1011087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal dysplasia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal dysplasia, non-human animal","termid":"MONDO:1010268"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal dysplasia, dog","secondary_identifiers":["OMIA:001135-9615"],"termid":"MONDO:1011087","xrefs":{"Monarch":{"xref_id":"1011087"}}}


id: PBO:0088290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S26","termid":"PBO:0088290"}


id: GO:0007608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of smell","secondary_identifiers":["Wikipedia:Olfaction"],"synonyms":[{"name":"olfaction","type":"exact"},{"name":"scent perception","type":"exact"},{"name":"sense of smell","type":"exact"},{"name":"smell perception","type":"exact"}],"termid":"GO:0007608"}


id: PBO:0038580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of basal transcription 1 pseudogene 1","termid":"PBO:0038580"}


id: PR:P22193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02073","PANTHER:PTHR10870:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint control protein rad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.07","secondary_identifiers":["UniProtKB:P22193"],"synonyms":[{"name":"Spom972h-RAD1","type":"exact"}],"termid":"PR:P22193"}


id: PR:Q92365
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.05","synonyms":[{"name":"Spom972h-rpl3601","type":"exact"}],"termid":"PR:Q92365"}


id: MONDO:0006301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, well-circumscribed renal cortical neoplasm affecting females more often than males. Polycythemia has been reported in twelve-percent of patients.","definition_xrefs":["NCIT:C27253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal adenoma","termid":"MONDO:0002395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"metanephric adenoma","secondary_identifiers":["ICDO:8325/0","EFO:1000373","ICDO:8191/0","DOID:6404","MEDGEN:266093","UMLS:C1266045"],"synonyms":[{"name":"metanephric adenoma","type":"exact"},{"name":"metanephric adenoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006301","xrefs":{"Monarch":{"xref_id":"0006301"}}}


id: PATO:0002211
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved backward or inward.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/recurved"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurved","termid":"PATO:0002211"}


id: MONDO:0859375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with hypotonia, myopathy, and brain abnormalities","secondary_identifiers":["OMIM:620240","MEDGEN:1840906","UMLS:C5830270"],"termid":"MONDO:0859375","xrefs":{"Monarch":{"xref_id":"0859375"}}}


id: GO:0032170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane at the junction between the mother cell and a pseudohyphal projection; composed of septins as well as septin-associated proteins.","definition_xrefs":["GOC:krc","GOC:mah","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"pseudohyphal septin ring","termid":"GO:0032170"}


id: MONDO:0015498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"oromandibular-limb anomalies syndrome","secondary_identifiers":["GARD:19996","icd11.foundation:1868700139","MEDGEN:1842880","Orphanet:156215","UMLS:C5680663"],"termid":"MONDO:0015498","xrefs":{"Monarch":{"xref_id":"0015498"}}}


id: PBO:0077960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-1","termid":"PBO:0077960"}


id: PBO:0083213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF YRF1-1/YDR545W","termid":"PBO:0083213"}


id: PBO:0055138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2557","termid":"PBO:0055138"}


id: MOD:01296
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to monosodium L-glutamate.","definition_xrefs":["Unimod:30#E","PubMed:12216740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosodium salt","termid":"MOD:00423"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium L-glutamate","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"MSG","type":"exact"},{"name":"Na1Glu","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:01296"}


id: PR:O59700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs3 gene.","definition_xrefs":["UniProtKB:O59700","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.03c","synonyms":[{"name":"Spom972h-mfs3","type":"exact"}],"termid":"PR:O59700"}


id: PBO:0072501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 30","termid":"PBO:0072501"}


id: PBO:0086704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; may contribute to cell wall biosynthesis, mutants display zymolyase hypersensitivity","termid":"PBO:0086704"}


id: PBO:0079860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-119 lipid binding chaperone","termid":"PBO:0079860"}


id: PBO:0067123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 168, pseudogene","termid":"PBO:0067123"}


id: PR:O94702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endoplasmic reticulum metallopeptidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum metallopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.02c","secondary_identifiers":["UniProtKB:O94702"],"synonyms":[{"name":"FXNA-like protease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ERMP1","type":"exact"}],"termid":"PR:O94702"}


id: MONDO:0008567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland papillary carcinoma","termid":"MONDO:0005075"},{"relation_name":"is_a","term_name":"familial nonmedullary thyroid carcinoma","termid":"MONDO:0017896"},{"relation_name":"is_a","term_name":"NKX2-1 related choreoathetosis and congenital hypothyroidism with or without pulmonary dysfunction","termid":"MONDO:0100520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid cancer, nonmedullary, 1","secondary_identifiers":["OMIM:188550","MEDGEN:1648293","UMLS:C4721429"],"synonyms":[{"name":"NMTC1","type":"related"},{"name":"familial nonmedullary thyroid cancer, papillary","type":"related"},{"name":"nonmedullary thyroid carcinoma, papillary","type":"related"},{"name":"papillary carcinoma of thyroid","type":"related"},{"name":"thyroid cancer, nonmedullary, 1","type":"exact"},{"name":"thyroid cancer, nonmedullary, type 1","type":"exact"}],"termid":"MONDO:0008567","xrefs":{"Monarch":{"xref_id":"0008567"}}}


id: MONDO:0000621
data:
  {"annotated_genes":["SJAG_01013","SJAG_01748","SJAG_03905","SJAG_05979","SJAG_01349","SJAG_02527","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89193,89194,89040,89038,89039,89041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[89160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the immune system","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_02527":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"immune system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060083"],"synonyms":[{"name":"cancer of immune system","type":"exact"},{"name":"immune system cancer","type":"exact"},{"name":"malignant immune system neoplasm","type":"exact"},{"name":"malignant neoplasm of immune system","type":"exact"}],"termid":"MONDO:0000621","terms_by_termid":{"MONDO:0009693":null,"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0000621"}}}


id: MONDO:1012917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in pigs due to a mutation in the PSEN1 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, PSEN1-related, pig","secondary_identifiers":["OMIA:002493-9823"],"termid":"MONDO:1012917","xrefs":{"Monarch":{"xref_id":"1012917"}}}


id: PBO:0028891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_transcribed_regions_during_vegetative_growth","termid":"PBO:0028891"}


id: MONDO:0025453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic respiratory disease caused by the visna-maedi virus. It was formerly believed to be identical with jaagsiekte (pulmonary adenomatosis, ovine) but is now recognized as a separate entity.","definition_xrefs":["MESH:D011021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia, progressive interstitial, of sheep","synonyms":[{"name":"Maedi","type":"related"},{"name":"progressive interstitial pneumonia of sheep","type":"related"}],"termid":"MONDO:0025453","xrefs":{"Monarch":{"xref_id":"0025453"}}}


id: PBO:0010344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin regulatory subunit (calcineurin B)","termid":"PBO:0010344"}


id: PBO:0058347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4720","termid":"PBO:0058347"}


id: PBO:0030081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cell_tip","termid":"PBO:0030081"}


id: MONDO:0004637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the aryepiglottic fold.","direct_ancestors":[{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"},{"relation_name":"is_a","term_name":"hypopharynx cancer","termid":"MONDO:0005806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"aryepiglottic fold cancer","secondary_identifiers":["UMLS:C0153401","SCTID:187708004","ICD10CM:C13.1","DOID:8663","ICD9:148.2","MEDGEN:509278"],"synonyms":[{"name":"aryepiglottic fold cancer","type":"exact"},{"name":"cancer of aryepiglottic fold","type":"exact"},{"name":"malignant aryepiglottic fold neoplasm","type":"exact"},{"name":"malignant neoplasm of aryepiglottic fold","type":"exact"},{"name":"malignant neoplasm of hypopharyngeal aspect of aryepiglottic fold","type":"exact"},{"name":"malignant tumor aryepiglottic fold - hypopharyngeal aspect","type":"exact"},{"name":"malignant tumour aryepiglottic fold - hypopharyngeal aspect","type":"exact"}],"termid":"MONDO:0004637","xrefs":{"Monarch":{"xref_id":"0004637"}}}


id: PBO:0050897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate filament family orphan 2","termid":"PBO:0050897"}


id: GO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"negatively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine metabolic process","termid":"GO:0060410"}


id: MONDO:0000694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by depressions that recur annually at the same time each year, usually during the winter months. Other symptoms include anxiety, irritability, decreased energy, increased appetite (carbohydrate cravings), increased duration of sleep, and weight gain. sad (seasonal affective disorder) can be treated by daily exposure to bright artificial lights (phototherapy), during the season of recurrence.","definition_xrefs":["MESH:D016574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"depressive disorder","termid":"MONDO:0002050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seasonal affective disorder","secondary_identifiers":["ICD9:296.99","SCTID:247803002","DOID:0060167","UMLS:C0085159","MEDGEN:38984"],"synonyms":[{"name":"SADS","type":"broad"},{"name":"sad","type":"broad"},{"name":"seasonal affective disorder","type":"exact"},{"name":"winter depression","type":"exact"}],"termid":"MONDO:0000694","xrefs":{"Monarch":{"xref_id":"0000694"}}}


id: PBO:0053489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 466","termid":"PBO:0053489"}


id: FYECO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which NAD+ was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NAD+","termid":"FYECO:0000074"}


id: PBO:0075961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STARD3 N-terminal like","termid":"PBO:0075961"}


id: MONDO:0002919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the posterior cranial fossa.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior cranial fossa meningioma","secondary_identifiers":["MEDGEN:290609","DOID:4211","UMLS:C1565950","NCIT:C6775"],"synonyms":[{"name":"meningioma (disease) of posterior cranial fossa","type":"exact"},{"name":"meningioma of posterior cranial fossa","type":"exact"},{"name":"meningioma of the posterior cranial fossa","type":"exact"},{"name":"posterior cranial fossa meningioma (disease)","type":"exact"}],"termid":"MONDO:0002919","xrefs":{"Monarch":{"xref_id":"0002919"}}}


id: MONDO:0700222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease that occurs as a consequence of immunosuppression in a recipient of a hematopoietic stem cell transplant, or as a consequence of the transplantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease related to transplantation","termid":"MONDO:0700220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease related to hematopoietic stem cell transplant","termid":"MONDO:0700222","xrefs":{"Monarch":{"xref_id":"0700222"}}}


id: MONDO:0020782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic painless inflammation of the gums. It is characterized by erythema and edema of the gums and bleeding while brushing the teeth.","definition_xrefs":["NCIT:C34474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingivitis","termid":"MONDO:0002508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic gingivitis","secondary_identifiers":["ICD9:523.10","SCTID:72621003","UMLS:C0008684","MEDGEN:965","icd11.foundation:1542018172","ICD9:523.1"],"synonyms":[{"name":"Chronic Gingivitis","type":"related"},{"name":"Chronic gingivitis","type":"related"},{"name":"chronic gingivitis","type":"exact"}],"termid":"MONDO:0020782","xrefs":{"Monarch":{"xref_id":"0020782"}}}


id: PBO:0002454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MS ion channel protein 2 (predicted)","termid":"PBO:0002454"}


id: MONDO:0019544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cocaine intoxication","secondary_identifiers":["SCTID:27956007","Orphanet:90068","ICD9:292.89","icd11.foundation:1965837313"],"termid":"MONDO:0019544","xrefs":{"Monarch":{"xref_id":"0019544"}}}


id: PBO:0040356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 5","termid":"PBO:0040356"}


id: FYECO:0000166
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium chloride (NaCl) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NaCl","synonyms":[{"name":"sodium chloride added","type":"exact"}],"termid":"FYECO:0000166"}


id: PBO:0028184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_copper","termid":"PBO:0028184"}


id: GO:1905958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to alcohol.","definition_xrefs":["PMID:26434723","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to alcohol","termid":"GO:1901420"},{"relation_name":"is_a","term_name":"regulation of cellular response to alcohol","termid":"GO:1905957"},{"relation_name":"negatively_regulates","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to alcohol","synonyms":[{"name":"down regulation of cellular response to alcohol","type":"exact"},{"name":"down-regulation of cellular response to alcohol","type":"exact"},{"name":"downregulation of cellular response to alcohol","type":"exact"},{"name":"inhibition of cellular response to alcohol","type":"narrow"}],"termid":"GO:1905958"}


id: PBO:0056715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"menin 1","termid":"PBO:0056715"}


id: PR:O74867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.17c gene.","definition_xrefs":["UniProtKB:O74867","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.17c","synonyms":[{"name":"Spom972h-SPCC18.17c","type":"exact"}],"termid":"PR:O74867"}


id: PR:Q9P7J7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ada2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adapter 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.08c","synonyms":[{"name":"Spom972h-ada2","type":"exact"}],"termid":"PR:Q9P7J7"}


id: MONDO:0000170
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013783"}]},"cv_name":"mondo","definition":"A developmental disorder of the eye characterized by unilateral or bilateral microphthalmia associated with ocular coloboma.","definition_xrefs":["Orphanet:98938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"},{"relation_name":"is_a","term_name":"coloboma","termid":"MONDO:0001476"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:444071","GARD:3644","MESH:C537463","OMIMPS:300345","UMLS:C2931500"],"synonyms":[{"name":"MAC","type":"exact"},{"name":"MCOPCB1","type":"related"},{"name":"colobomatous microphthalmia","type":"exact"},{"name":"microphthalmia associated with colobomatous cyst","type":"related"},{"name":"microphthalmia with colobomatous cyst","type":"exact"},{"name":"microphthalmia-anophthalmia-coloboma syndrome","type":"exact"},{"name":"microphthalmos bilateral, colobomatous orbital cyst","type":"related"}],"termid":"MONDO:0000170","terms_by_termid":{"MONDO:0013783":null},"xrefs":{"Monarch":{"xref_id":"0000170"}}}


id: GO:0009063
data:
  {"annotated_genes":["SJAG_00674","SJAG_02901","SJAG_02235","SJAG_03398","SJAG_02734","SJAG_04842","SJAG_00495","SJAG_00714","SJAG_00937","SJAG_03434","SJAG_03743","SJAG_03861","SJAG_04145","SJAG_04827","SJAG_02496","SJAG_01903","SJAG_02450","SJAG_00944","SJAG_03293","SJAG_03641","SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75656,72935,73258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[82185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[80758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[89263,90255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"},{"annotations":[75953,98295,79846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[70214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[80201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[80199,115194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[72638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[115931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"},{"annotations":[81433,93566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[72014,79924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[73897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[74864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00674":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_00944":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02450":null,"SJAG_02496":null,"SJAG_02734":null,"SJAG_02901":null,"SJAG_03293":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03743":null,"SJAG_03861":null,"SJAG_04145":null,"SJAG_04827":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino acid breakdown","type":"exact"},{"name":"amino acid catabolism","type":"exact"},{"name":"amino acid degradation","type":"exact"},{"name":"cellular amino acid catabolic process","type":"exact"}],"termid":"GO:0009063","terms_by_termid":{"GO:0000949":null,"GO:0006533":null,"GO:0006538":null,"GO:0006567":null,"GO:0006574":null,"GO:0009450":null,"GO:0010121":null,"GO:0010133":null,"GO:0019450":null,"GO:0019464":null,"GO:0019478":null,"GO:0019544":null,"GO:0036088":null,"GO:0042853":null}}


id: FYPO:0005742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is decreased under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal invertase activity","termid":"FYPO:0005741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased invertase activity during glucose starvation","synonyms":[{"name":"decreased beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"decreased invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"decreased invertase activity during glucose depletion","type":"exact"},{"name":"decreased invertase activity during glucose deprivation","type":"exact"},{"name":"decreased invertase activity during glucose limitation","type":"related"},{"name":"reduced invertase activity during glucose starvation","type":"exact"}],"termid":"FYPO:0005742"}


id: GO:1902684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor localization to synapse.","definition_xrefs":["PMID:22252129","GO_REF:0000058","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"negatively_regulates","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor localization to synapse","synonyms":[{"name":"down regulation of receptor localisation to synapse","type":"exact"},{"name":"down regulation of receptor localization to synapse","type":"exact"},{"name":"down-regulation of receptor localisation to synapse","type":"exact"},{"name":"down-regulation of receptor localization to synapse","type":"exact"},{"name":"downregulation of receptor localisation to synapse","type":"exact"},{"name":"downregulation of receptor localization to synapse","type":"exact"},{"name":"inhibition of receptor localisation to synapse","type":"narrow"},{"name":"inhibition of receptor localization to synapse","type":"narrow"},{"name":"negative regulation of receptor localisation to synapse","type":"exact"}],"termid":"GO:1902684"}


id: MONDO:0004243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid sarcoma of the proximal type involving the vulva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal-type epithelioid sarcoma","termid":"MONDO:0004244"},{"relation_name":"is_a","term_name":"vulva sarcoma","termid":"MONDO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar proximal-type epithelioid sarcoma","secondary_identifiers":["NCIT:C40319","MEDGEN:276995","UMLS:C1520093","DOID:7491"],"termid":"MONDO:0004243","xrefs":{"Monarch":{"xref_id":"0004243"}}}


id: PBO:0062496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily C member 1 pseudogene","termid":"PBO:0062496"}


id: GO:1900304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of laminaritriose transport","termid":"GO:1900303"},{"relation_name":"negatively_regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of laminaritriose transport","synonyms":[{"name":"down regulation of laminaritriose transport","type":"exact"},{"name":"down-regulation of laminaritriose transport","type":"exact"},{"name":"downregulation of laminaritriose transport","type":"exact"},{"name":"inhibition of laminaritriose transport","type":"narrow"}],"termid":"GO:1900304"}


id: GO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process contributing to anergy in B cells, a state of functional inactivation which is part of B cell tolerance induction.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte anergy","termid":"GO:0002249"},{"relation_name":"is_a","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell anergy","synonyms":[{"name":"B lymphocyte anergy","type":"exact"},{"name":"B-cell anergy","type":"exact"},{"name":"B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002515"}


id: MONDO:0001570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete locked-in syndrome (obsolete MONDO:0001570)","termid":"MONDO:0001570","xrefs":{"Monarch":{"xref_id":"0001570"}}}


id: SO:0000909
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that has been predicted using sequence similarity to EST or cDNA data.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supported_by_sequence_similarity","termid":"SO:0000907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supported_by_EST_or_cDNA","synonyms":[{"name":"supported by EST or cDNA","type":"exact"}],"termid":"SO:0000909"}


id: PBO:0043199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase B pseudogene 1","termid":"PBO:0043199"}


id: PBO:0080405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS35 pseudogene 1","termid":"PBO:0080405"}


id: MOD:01638
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces a glycine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine removal","termid":"MOD:01638"}


id: PBO:0082871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortical ER protein; implicated in the membrane insertion of tail-anchored C-terminal single transmembrane domain proteins; may function in transport of glycosylphosphatidylinositol intermediates into the ER lumen; required for normal intracellular sterol distribution; human ARV1, required for normal cholesterol and bile acid homeostasis, can complement yeast arv1 null mutant; human variant causing early onset epileptic encephalopathy is unable to rescue the yeast null","termid":"PBO:0082871"}


id: GO:0003228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cardiac muscle of the atrium over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle tissue development","synonyms":[{"name":"atrial myocardium development","type":"exact"}],"termid":"GO:0003228"}


id: MONDO:0011004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by severe microcephaly, agyria, agenesis of the corpus callosum, cerebellar hypoplasia, facial dysmorphology and epiphyseal stippling of the metacarpal bones. It has been described in two brothers. The syndrome is transmitted as an autosomal recessive trait and may be an allelic variant of Neu-Laxova syndrome and Lissencephaly type III with cystic dilations of the cerebellum and fetal akinesia sequence.","definition_xrefs":["Orphanet:86822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly type 3","termid":"MONDO:0015148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly type 3-metacarpal bone dysplasia syndrome","secondary_identifiers":["GARD:16763","MEDGEN:371379","OMIM:601160","SCTID:718720007","MESH:C563383","UMLS:C1832678"],"synonyms":[{"name":"lissencephaly type 3 and bone dysplasia","type":"related"},{"name":"lissencephaly type III and bone dysplasia","type":"related"}],"termid":"MONDO:0011004","xrefs":{"Monarch":{"xref_id":"0011004"}}}


id: MONDO:0021443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the lymph node.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system organ benign neoplasm","termid":"MONDO:0000630"},{"relation_name":"is_a","term_name":"lymph node neoplasm","termid":"MONDO:0024339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"benign neoplasm of lymph node","secondary_identifiers":["ICD9:229.0","MEDGEN:57815","NCIT:C3636","SCTID:92197001","UMLS:C0154054","DOID:0080617"],"synonyms":[{"name":"benign lymph node neoplasm","type":"exact"},{"name":"benign lymph node tumor","type":"exact"},{"name":"benign lymph node tumour","type":"exact"},{"name":"benign neoplasm of the lymph node","type":"exact"},{"name":"benign tumor of lymph node","type":"exact"},{"name":"benign tumor of the lymph node","type":"exact"},{"name":"benign tumour of lymph node","type":"exact"},{"name":"benign tumour of the lymph node","type":"exact"},{"name":"lymph node benign neoplasm","type":"exact"}],"termid":"MONDO:0021443","xrefs":{"Monarch":{"xref_id":"0021443"}}}


id: PBO:0070404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP9 pseudogene","termid":"PBO:0070404"}


id: PBO:0082613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cohesion maintenance factor; involved in sister chromatid condensation and cohesion; colocalizes with cohesin on chromosomes; performs its cohesin maintenance function in pre-anaphase cells by protecting the integrity of the cohesion complex; also required during meiosis; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082613"}


id: MONDO:0009984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that is characterized by onset of symptoms in the fifth or sixth decade of life.","definition_xrefs":["DOID:0110421","PMID:1424244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"late-adult onset retinitis pigmentosa","secondary_identifiers":["GARD:15230","OMIM:268025","MEDGEN:340316","UMLS:C1849400","MESH:C564840","ICD10CM:H35.5"],"synonyms":[{"name":"retinitis pigmentosa, 'Senile'","type":"related"},{"name":"retinitis pigmentosa, late-ADULT onset","type":"related"},{"name":"senile retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0009984","xrefs":{"Monarch":{"xref_id":"0009984"}}}


id: GO:1901528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any hydrogen peroxide mediated signaling pathway that is involved in stomatal movement.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen peroxide mediated signaling pathway involved in stomatal movement (obsolete GO:1901528)","synonyms":[{"name":"H2O2 mediated signaling pathway involved in stomatal movement","type":"exact"},{"name":"hydrogen peroxide mediated signalling pathway involved in stomatal movement","type":"exact"}],"termid":"GO:1901528"}


id: GO:0106215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vesicle fustion with Golgi apparatus.","definition_xrefs":["GOC:se","PMID:26195667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106214"},{"relation_name":"negatively_regulates","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106215"}


id: SO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a proplastid such as an immature chloroplast.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proplastid_sequence","synonyms":[{"name":"proplastid sequence","type":"exact"}],"termid":"SO:0000748"}


id: SO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a hpRNA.","definition_xrefs":["PMID:18719707","PMID:18463630","PMID:25544562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hpRNA_gene","synonyms":[{"name":"Hairpin RNA gene","type":"exact"}],"termid":"SO:0002355"}


id: PBO:0055130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2549","termid":"PBO:0055130"}


id: GO:0055112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splitting or migration of one epithelial sheet into two involved in the process of deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"delamination involved in gastrulation with mouth forming second","termid":"GO:0055112"}


id: GO:0004565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides.","definition_xrefs":["EC:3.2.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"beta-galactosidase activity","secondary_identifiers":["Reactome:R-HSA-9840795","Reactome:R-HSA-1605624","Reactome:R-HSA-1630306","MetaCyc:3.2.1.23-RXN","Reactome:R-HSA-9036061","Reactome:R-HSA-2265534","Reactome:R-HSA-1793217","Reactome:R-HSA-1606312","Reactome:R-HSA-2090079"],"synonyms":[{"name":"beta-D-galactanase activity","type":"related"},{"name":"beta-D-galactoside galactohydrolase activity","type":"related"},{"name":"beta-D-lactosidase activity","type":"related"},{"name":"beta-lactosidase activity","type":"related"},{"name":"exo-(1->4)-beta-D-galactanase activity","type":"related"},{"name":"hydrolact","type":"related"}],"termid":"GO:0004565"}


id: PBO:0114321
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat region consensus DSESESSSEDSDSSSSSS ~7 copies","termid":"PBO:0114321"}


id: FYPO:0008119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by normal cell morphology (i.e. size, shape, and structure indistinguishable from wild type) when the cell is subject to phophate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell morphology","termid":"FYPO:0000672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal morphology during phosphate starvation","termid":"FYPO:0008119"}


id: PR:O13908
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C22A12.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.17c","synonyms":[{"name":"Spom972h-SPAC22A12.17c","type":"exact"}],"termid":"PR:O13908"}


id: GO:0160188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a sterol from one side of a membrane to the other according to the reaction: H+(out) + sterol(in) = H+(in) + sterol(out).","definition_xrefs":["PMID:31543266"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol:proton antiporter activity (obsolete GO:0160188)","termid":"GO:0160188"}


id: MONDO:0013118
data:
  {"annotated_genes":["SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87372],"is_not":false,"summary":null,"term":"MONDO:0013118"}]},"cv_name":"mondo","definition":"Nijmegen breakage syndrome-like disorder is a rare, genetic multiple congenital anomalies/dysmorphic syndrome characterized by growth retardation, short stature, developmental delay, intellectual disability, craniofacial dysmorphism (i.e. severe microcephaly, sloping forehead, prominent eyes, broad nasal ridge, hypoplastic nasal septum, epicanthal folds), spontaneous chromosomal instability, cellular hypersensitivity to ionizing radiation and radioresistant DNA synthesis, without severe infections, immunodeficiency or cancer predisposition. Additional reported features include mild spasticity, slight and nonprogressive ataxia, hyperopia, multiple pigmented nevi, widely spaced nipples, and clinodactyly.","definition_xrefs":["Orphanet:240760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"Nijmegen breakage syndrome-like disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:766753005","UMLS:C2751318","icd11.foundation:1014526672","MESH:C567767","MEDGEN:442700","NCIT:C153178","GARD:17184","OMIM:613078"],"synonyms":[{"name":"NBSLD","type":"exact"},{"name":"NBs-like disorder","type":"exact"},{"name":"Nijmegen breakage syndrome-like disorder","type":"exact"},{"name":"RAD50 deficiency","type":"exact"},{"name":"Rad50 deficiency","type":"related"},{"name":"microcephaly and chromosomal instability without immunodeficiency","type":"exact"},{"name":"microcephaly and spontaneous chromosome instability without immunodeficiency","type":"related"}],"termid":"MONDO:0013118","terms_by_termid":{"MONDO:0013118":null},"xrefs":{"Monarch":{"xref_id":"0013118"}}}


id: GO:0030227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with apolipoprotein E to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein E receptor activity (obsolete GO:0030227)","synonyms":[{"name":"ApoE receptor","type":"exact"},{"name":"apolipoprotein E receptor activity","type":"exact"}],"termid":"GO:0030227"}


id: PBO:0075667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 2","termid":"PBO:0075667"}


id: GO:0010266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B1 stimulus.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B1","synonyms":[{"name":"response to thiamin","type":"exact"},{"name":"response to thiamine","type":"exact"}],"termid":"GO:0010266"}


id: PBO:0085774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII vesicles; proposed to be involved in ER to Golgi transport; interacts with members of the Rab GTPase family and Yip1p; also interacts with Rtn1p","termid":"PBO:0085774"}


id: PBO:0048290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin receptor 2","termid":"PBO:0048290"}


id: PBO:0067919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 221","termid":"PBO:0067919"}


id: MONDO:1011082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, pig","secondary_identifiers":["OMIA:001033-9823"],"termid":"MONDO:1011082","xrefs":{"Monarch":{"xref_id":"1011082"}}}


id: GO:0042351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-L-fucose from GDP-D-mannose via GDP-4-dehydro-6-deoxy-D-mannose, requiring the functions of GDP-mannose 4,6-dehydratase (EC:4.2.1.47) and GDP-L-fucose synthase (EC:1.1.1.271).","definition_xrefs":["PMID:11030750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-mannose metabolic process","termid":"GO:0019673"},{"relation_name":"is_a","term_name":"GDP-L-fucose biosynthetic process","termid":"GO:0042350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"'de novo' GDP-L-fucose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-66"],"synonyms":[{"name":"'de novo' GDP-L-fucose anabolism","type":"exact"},{"name":"'de novo' GDP-L-fucose biosynthesis","type":"exact"},{"name":"'de novo' GDP-L-fucose formation","type":"exact"},{"name":"'de novo' GDP-L-fucose synthesis","type":"exact"},{"name":"GDP-L-fucose biosynthesis, de novo pathway","type":"exact"},{"name":"GDP-L-fucose biosynthetic process, de novo pathway","type":"exact"}],"termid":"GO:0042351"}


id: PBO:0056226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member E2","termid":"PBO:0056226"}


id: GO:0160205
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62155],"is_not":false,"summary":null,"term":"GO:0160205"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [ADP-thiazole synthase]-L-cysteine + glycine + NAD(+) = [ADP-thiazole synthase]-dehydroalanine + ADP-5-ethyl-4-methylthiazole-2-carboxylate + 2 H(+) + 3 H2O + nicotinamide.","definition_xrefs":["RHEA:55708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cysteine-dependent adenosine diphosphate thiazole synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.4.2.60"],"synonyms":[{"name":"ADP-thiazole synthase activity","type":"related"},{"name":"suicide thiamine thiazole synthase activity","type":"exact"}],"termid":"GO:0160205","terms_by_termid":{"GO:0160205":null}}


id: FYPO:0007598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at a site where silencing can normally be triggered by the ectopic tethering of a protein.","definition_xrefs":["PomBase:mah","PMID:23613586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished chromatin silencing at ectopic tethering site","synonyms":[{"name":"abolished chromatin silencing at ectopic tethering site during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at ectopic tethering site during vegetative growth","type":"exact"}],"termid":"FYPO:0007598"}


id: MONDO:0957873
data:
  {"annotated_genes":["SJAG_02471"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88355],"is_not":false,"summary":null,"term":"MONDO:0957873"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy with vanishing white matter","termid":"MONDO:0800448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy with vanishing white matter 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1830483","OMIM:620315","UMLS:C5779973","DOID:0070367"],"termid":"MONDO:0957873","terms_by_termid":{"MONDO:0957873":null},"xrefs":{"Monarch":{"xref_id":"0957873"}}}


id: PBO:0065480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 1","termid":"PBO:0065480"}


id: PBO:0076968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 2 like Y-linked","termid":"PBO:0076968"}


id: PBO:0044288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 51B","termid":"PBO:0044288"}


id: MONDO:1010419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narcolepsy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, non-human animal","termid":"MONDO:1010003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy, domestic cat","secondary_identifiers":["OMIA:000703-9685"],"termid":"MONDO:1010419","xrefs":{"Monarch":{"xref_id":"1010419"}}}


id: PBO:0083812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential RNA-binding G protein effector of mating response pathway; ligand-activated RNA-binding protein that delivers RNAs involved in polarization and perpetualizing mating signal to shmoo tip during pheromone signaling; Scp160p-mediated RNA trafficking essential for chemotropism and successful mating; mainly associated with nuclear envelope and ER, interacts in mRNA-dependent manner with translating ribosomes via multiple KH domains, similar to vertebrate vigilins","termid":"PBO:0083812"}


id: PBO:0055512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2946","termid":"PBO:0055512"}


id: GO:0090621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An anaphase promoting complex bound to the fizzy-related family APC activator FZR1/Cdh1/Srw1 that regulates mitotic exit by activating the APC/C to target mitotic cyclins for destruction during anaphase and telophase. Is also active during G1.","definition_xrefs":["PMID:10921876","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete APC-fizzy-related complex (obsolete GO:0090621)","synonyms":[{"name":"APC-Hct1/Cdh1 complex","type":"exact"},{"name":"APC-Srw1 complex","type":"exact"}],"termid":"GO:0090621"}


id: PBO:0074199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 9","termid":"PBO:0074199"}


id: PR:G2TRM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.17 gene.","definition_xrefs":["UniProtKB:G2TRM9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.17","synonyms":[{"name":"Spom972h-SPAC4H3.17","type":"exact"}],"termid":"PR:G2TRM9"}


id: PBO:0091166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial succinate dehydrogenase assembly factor, LYR family Sdh6","termid":"PBO:0091166"}


id: MOD:00840
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with an isocyanate compound.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocyanate reagent derivatized residue","termid":"MOD:00840"}


id: MONDO:0030506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 9","secondary_identifiers":["UMLS:C5562046","MEDGEN:1794256","OMIM:619665"],"synonyms":[{"name":"ODG9","type":"exact"}],"termid":"MONDO:0030506","xrefs":{"Monarch":{"xref_id":"0030506"}}}


id: PBO:0067597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 760, pseudogene","termid":"PBO:0067597"}


id: FYPO:0005392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the frequency of DNA recombination is normal (i.e. indistinguishable from wild type) during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal DNA recombination frequency during cellular response to ionizing radiation","synonyms":[{"name":"normal DNA recombination frequency during cellular response to IR","type":"exact"},{"name":"normal DNA recombination frequency during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"normal DNA recombination frequency during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005392"}


id: PBO:0027441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_minichromosome_loss_during_vegetative_growth","termid":"PBO:0027441"}


id: FYPO:0003653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription elongation from an RNA polymerase III promoter occurs to a normal (i.e. indistinguishable from wild type) extent.","definition_xrefs":["GO:0006385","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal transcription elongation from RNA polymerase III promoter during vegetative growth","synonyms":[{"name":"normal transcription elongation from RNA polymerase III promoter during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003653"}


id: PBO:0058451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5090","termid":"PBO:0058451"}


id: MONDO:0017609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal tubular dysgenesis is a rare disorder of the fetus characterized by absent or poorly developed proximal tubules of the kidneys, persistent oligohydramnios, leading to Potter sequence (facial dysmorphism with large and flat low-set ears, lung hypoplasia arthrogryposis and limb positioning defects), and skull ossification defects. It can be acquired during fetal development due to drugs taken by the mother or certain disorders (twin-twin transfusion syndrome, TTTS) or inherited in an autosomal recessive manner.","definition_xrefs":["Orphanet:3033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal tubular dysgenesis","secondary_identifiers":["GARD:379","UMLS:C0266313","icd11.foundation:191424358","MEDGEN:82738","SCTID:702397002"],"synonyms":[{"name":"primitive renal tubule syndrome","type":"exact"},{"name":"renotubular dysgenesis","type":"exact"}],"termid":"MONDO:0017609","xrefs":{"Monarch":{"xref_id":"0017609"}}}


id: PATO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being partially upright in position or posture.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erect","termid":"PATO:0000622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi erect","synonyms":[{"name":"semi upright","type":"exact"}],"termid":"PATO:0002260"}


id: PBO:0043415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide binding domain containing 1","termid":"PBO:0043415"}


id: PBO:0068143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 450","termid":"PBO:0068143"}


id: PBO:0091261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing, not reproduced","termid":"PBO:0091261"}


id: GO:0042631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of water.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water deprivation","termid":"GO:0009414"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cellular response to water stimulus","termid":"GO:0071462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to water deprivation","synonyms":[{"name":"cellular response to drought","type":"exact"}],"termid":"GO:0042631"}


id: PBO:0086666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR","termid":"PBO:0086666"}


id: MONDO:0012718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by severe hypotonia, lactic academia and congenital hyperammonaemia.","definition_xrefs":["Orphanet:137908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"hypotonia with lactic acidemia and hyperammonemia","secondary_identifiers":["DOID:0111473","GARD:16950","MEDGEN:435972","MESH:C567126","SCTID:724279004","OMIM:611719","UMLS:C2673642"],"synonyms":[{"name":"COXPD5","type":"exact"},{"name":"MRPS22 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation defect type 5","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 5","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MRPS22","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 5","type":"exact"}],"termid":"MONDO:0012718","xrefs":{"Monarch":{"xref_id":"0012718"}}}


id: MONDO:0018181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A blistering skin disorder caused by exfoliative toxins produced by Staphylococcus aureus infection. The toxins cause the formation of bullae and diffuse skin desquamation. The lesions may be localized or generalized, far away from the initial site of infection.","definition_xrefs":["NCIT:C85077"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"staphylococcus aureus infection","termid":"MONDO:0005545"},{"relation_name":"is_a","term_name":"staphylococcal toxemia","termid":"MONDO:0017592"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"staphylococcal scalded skin syndrome","secondary_identifiers":["Orphanet:36236","MESH:D013206","GARD:13158","SCTID:200946001","SCTID:277475006","DOID:9063","ICD10CM:L00","icd11.foundation:1554593739","EFO:0007473","MEDGEN:52484","NORD:1781","UMLS:C0038165","ICD9:695.81","MedDRA:10041929"],"synonyms":[{"name":"Ritter disease","type":"exact"},{"name":"Ritter's disease","type":"exact"},{"name":"SSSS","type":"exact"},{"name":"dermatitis exfoliativa neonatorum","type":"exact"},{"name":"generalised exfoliative disease","type":"exact"},{"name":"generalized exfoliative disease","type":"exact"},{"name":"pemphigus neonatorum","type":"exact"},{"name":"scalded skin syndrome","type":"exact"},{"name":"staphylococcal scalded skin syndrome","type":"exact"},{"name":"toxic epidermal necrolysis, subcorneal type","type":"exact"}],"termid":"MONDO:0018181","xrefs":{"Monarch":{"xref_id":"0018181"}}}


id: PBO:0058810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7852","termid":"PBO:0058810"}


id: MONDO:0017866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary valve stenosis","termid":"MONDO:0017865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subpulmonary stenosis","secondary_identifiers":["SCTID:448476001","UMLS:C3165028","GARD:5051","MEDGEN:757434","Orphanet:3190","icd11.foundation:1393194578"],"termid":"MONDO:0017866","xrefs":{"Monarch":{"xref_id":"0017866"}}}


id: GO:0010634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell migration.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell migration","termid":"GO:0010632"},{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"positively_regulates","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell migration","termid":"GO:0010634"}


id: PBO:0048815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 4","termid":"PBO:0048815"}


id: GO:2000282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular amino acid biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"amino acid biosynthetic process","termid":"GO:0008652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of amino acid biosynthetic process","synonyms":[{"name":"regulation of cellular amino acid anabolism","type":"exact"},{"name":"regulation of cellular amino acid biosynthesis","type":"exact"},{"name":"regulation of cellular amino acid biosynthetic process","type":"exact"},{"name":"regulation of cellular amino acid formation","type":"exact"},{"name":"regulation of cellular amino acid synthesis","type":"exact"}],"termid":"GO:2000282"}


id: PBO:0039308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 3, alpha-ketoglutarate dependent dioxygenase","termid":"PBO:0039308"}


id: SO:0000553
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The site on an RNA transcript to which will be added adenine residues by post-transcriptional polyadenylation. The boundary between the UTR and the polyA sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"},{"relation_name":"part_of","term_name":"mature_transcript","termid":"SO:0000233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyA_site","secondary_identifiers":["SO:0001430"],"synonyms":[{"name":"INSDC_feature:polyA_site","type":"exact"},{"name":"polyA cleavage site","type":"exact"},{"name":"polyA junction","type":"exact"},{"name":"polyA site","type":"exact"},{"name":"polyA_junction","type":"exact"},{"name":"polyadenylation site","type":"related"}],"termid":"SO:0000553"}


id: MONDO:0020224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare cataract.","gene_count":0,"genotype_count":0,"name":"obsolete rare cataract (obsolete MONDO:0020224)","secondary_identifiers":["Orphanet:98640"],"synonyms":[{"name":"rare cataract","type":"exact"},{"name":"rare cataract (disease)","type":"exact"}],"termid":"MONDO:0020224","xrefs":{"Monarch":{"xref_id":"0020224"}}}


id: GO:2000987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of behavioral fear response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"positive regulation of fear response","termid":"GO:1903367"},{"relation_name":"is_a","term_name":"regulation of behavioral fear response","termid":"GO:2000822"},{"relation_name":"positively_regulates","term_name":"behavioral fear response","termid":"GO:0001662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of behavioral fear response","synonyms":[{"name":"positive regulation of behavioural fear response","type":"exact"}],"termid":"GO:2000987"}


id: GO:0061412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of amino acids.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation (obsolete GO:0061412)","termid":"GO:0061412"}


id: FYPO:0008020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing leucine as the nitrogen source.","definition_xrefs":["PMID:7903653","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell population growth on leucine nitrogen source","synonyms":[{"name":"decreased growth on leucine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on leucine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with leucine nitrogen source","type":"narrow"},{"name":"reduced cell population growth on leucine nitrogen source","type":"exact"},{"name":"slow cell growth on leucine nitrogen source","type":"narrow"}],"termid":"FYPO:0008020"}


id: FYPO:0005284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to bleomycin. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to bleomycin (obsolete FYPO:0005284)","synonyms":[{"name":"cut during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to bleomycin during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to bleomycin","type":"exact"}],"termid":"FYPO:0005284"}


id: PBO:0079739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 6","termid":"PBO:0079739"}


id: PBO:0005703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-NF-X1 zinc finger","termid":"PBO:0005703"}


id: PBO:0065990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination activating 2","termid":"PBO:0065990"}


id: PBO:0066211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 4","termid":"PBO:0066211"}


id: PBO:0078974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 2-1","termid":"PBO:0078974"}


id: MONDO:0018429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14q24.1q24.3 microdeletion syndrome","secondary_identifiers":["Orphanet:401935","UMLS:C4750911","MEDGEN:1668571","GARD:21706"],"synonyms":[{"name":"Del(14)(q24.1q24.3)","type":"exact"},{"name":"monosomy 14q24.1q24.3","type":"exact"}],"termid":"MONDO:0018429","xrefs":{"Monarch":{"xref_id":"0018429"}}}


