# terms

id: PBO:0027504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_fluconazole","termid":"PBO:0027504"}


id: GO:0044828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism stops, prevents or reduces the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation by host of viral process","termid":"GO:0044793"},{"relation_name":"is_a","term_name":"modulation by host of viral genome replication","termid":"GO:0044827"},{"relation_name":"negatively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral genome replication","termid":"GO:0044828"}


id: GO:0120031
data:
  {"annotated_genes":["SJAG_02700","SJAG_01894","SJAG_03453","SJAG_02379","SJAG_00514","SJAG_04509","SJAG_01943","SJAG_02864","SJAG_02989","SJAG_01993","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100877,100794,116321,100182,94375,90092],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[95338,113347,91712,92695,89723],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Formation of a prolongation or process extending and that is bounded by plasma membrane, e.g. a cilium, lamellipodium, or axon.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02379":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"plasma membrane bounded cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eupodium","type":"narrow"}],"termid":"GO:0120031","terms_by_termid":{"GO:1902917":null,"GO:1904600":null}}


id: PBO:0055965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 78, pseudogene","termid":"PBO:0055965"}


id: PBO:0052451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 3 pseudogene 2","termid":"PBO:0052451"}


id: PBO:0068182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 489","termid":"PBO:0068182"}


id: PBO:0028344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0028344"}


id: PBO:0054120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1486","termid":"PBO:0054120"}


id: PBO:0085466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-mRNA splicing factor; facilitates the cooperative formation of U2/U6 helix II in association with stem II in the spliceosome, function may be regulated by Slu7p","termid":"PBO:0085466"}


id: PBO:0055144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2563","termid":"PBO:0055144"}


id: GO:1904183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of pyruvate dehydrogenase activity.","definition_xrefs":["GOC:dph","PMID:25525879","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pyruvate dehydrogenase activity (obsolete GO:1904183)","synonyms":[{"name":"down regulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"down regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"down regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"down-regulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"down-regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"down-regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"downregulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"downregulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"downregulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"inhibition of pyruvate dehydrogenase activity","type":"narrow"},{"name":"inhibition of pyruvic acid dehydrogenase activity","type":"narrow"},{"name":"inhibition of pyruvic dehydrogenase activity","type":"narrow"},{"name":"negative regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"negative regulation of pyruvic dehydrogenase activity","type":"exact"}],"termid":"GO:1904183"}


id: GO:0031455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycine betaine, N-trimethylglycine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine metabolic process","synonyms":[{"name":"N-trimethylglycine metabolic process","type":"exact"},{"name":"N-trimethylglycine metabolism","type":"exact"},{"name":"glycine betaine metabolism","type":"exact"}],"termid":"GO:0031455"}


id: GO:0006129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-disulfide reduction (obsolete GO:0006129)","synonyms":[{"name":"protein-disulfide reduction","type":"exact"},{"name":"protein-disulphide reduction","type":"exact"}],"termid":"GO:0006129"}


id: GO:0031156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sorocarp development. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","PMID:4332228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"sorocarp development","termid":"GO:0030587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sorocarp development","synonyms":[{"name":"regulation of fruiting body development","type":"broad"},{"name":"regulation of fruiting body formation","type":"broad"}],"termid":"GO:0031156"}


id: FYPO:0002141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) at a low temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0000257","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal cell population growth at low temperature","synonyms":[{"name":"normal growth at low temperature","type":"broad"},{"name":"normal vegetative cell population growth at low temperature","type":"exact"}],"termid":"FYPO:0002141"}


id: GO:0004831
data:
  {"annotated_genes":["SJAG_00243","SJAG_04473"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72528,80627],"is_not":false,"summary":null,"term":"GO:0004831"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + ATP + tRNA(Tyr) = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + 2 H+.","definition_xrefs":["RHEA:10220","EC:6.1.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00243":null,"SJAG_04473":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140101","GO:0016874","GO:0140098"],"is_obsolete":false,"name":"tyrosine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-380170","Reactome:R-HSA-379980","KEGG_REACTION:R02918","MetaCyc:TYROSINE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"L-tyrosine-tRNA(Tyr) ligase (AMP-forming) activity","type":"related"},{"name":"L-tyrosine-tRNATyr ligase (AMP-forming)","type":"related"},{"name":"L-tyrosine:tRNATyr ligase (AMP-forming)","type":"related"},{"name":"tyrosine tRNA synthetase activity","type":"related"},{"name":"tyrosine translase activity","type":"related"},{"name":"tyrosine-transfer RNA ligase activity","type":"related"},{"name":"tyrosine-transfer ribonucleate synthetase activity","type":"related"},{"name":"tyrosyl-tRNA ligase activity","type":"related"},{"name":"tyrosyl-tRNA synthetase activity","type":"exact"},{"name":"tyrosyl-transfer RNA synthetase activity","type":"related"},{"name":"tyrosyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"tyrosyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004831","terms_by_termid":{"GO:0004831":null}}


id: MONDO:0014628
data:
  {"annotated_genes":["SJAG_00233"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87070],"is_not":false,"summary":null,"term":"MONDO:0014628"}]},"cv_name":"mondo","definition":"Any bilateral striopallidodentate calcinosis in which the cause of the disease is a mutation in the XPR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:901404","OMIM:616413","UMLS:C4225335","GARD:16107"],"synonyms":[{"name":"IBGC6","type":"related"},{"name":"XPR1 bilateral striopallidodentate calcinosis","type":"exact"},{"name":"basal ganglia calcification, idiopathic, 6","type":"exact"},{"name":"basal ganglia calcification, idiopathic, type 6","type":"exact"},{"name":"bilateral striopallidodentate calcinosis caused by mutation in XPR1","type":"exact"}],"termid":"MONDO:0014628","terms_by_termid":{"MONDO:0014628":null},"xrefs":{"Monarch":{"xref_id":"0014628"}}}


id: MONDO:0100375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(15;17)(q24;q21). (A chromosomal translocation associated with creation of a fusion between the PML and RARA genes. It is seen in variants of acute promyelocytic leukemia.)","definition_xrefs":["NCIT:C27758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, t(15;17)(q24;q21)","secondary_identifiers":["NCIT:C36055"],"synonyms":[{"name":"AML, t(15;17)(q22;q12)","type":"exact"},{"name":"AML, t(15;17)(q22;q21)","type":"exact"},{"name":"AML, t(15;17)(q24;q21)","type":"exact"}],"termid":"MONDO:0100375","xrefs":{"Monarch":{"xref_id":"0100375"}}}


id: PBO:0087809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telobox-containing general regulatory factor; binds TTAGGG repeats within subtelomeric anti-silencing regions (STARs), blocking silent chromatin propagation; binds majority of snoRNA gene promoters, required for full snoRNA expression; caps DSB flanked by long T2AG3 repeats and blocks checkpoint activation","termid":"PBO:0087809"}


id: GO:0010071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of a meristem which will give rise to a primary or lateral root.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"embryonic meristem initiation","termid":"GO:0090421"},{"relation_name":"part_of","term_name":"root morphogenesis","termid":"GO:0010015"},{"relation_name":"part_of","term_name":"embryonic meristem development","termid":"GO:0048508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root meristem specification","termid":"GO:0010071"}


id: MONDO:0011939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spondyloenchondrodysplasia with immune dysregulation","secondary_identifiers":["ICD9:756.9","MESH:C564307","ICD9:759.89","MESH:C535782","MEDGEN:375009","GARD:4978","OMIM:271550","NANDO:2200744","OMIM:607944","SCTID:703523004","UMLS:C1842763","Orphanet:1855","Orphanet:50816","SCTID:254079002"],"synonyms":[{"name":"Roifman Immunoskeletal syndrome","type":"exact"},{"name":"SEM","type":"related"},{"name":"SPENCD","type":"exact"},{"name":"SPENCDI","type":"exact"},{"name":"Spondyloenchondrodysplasia with immune dysregulation","type":"exact"},{"name":"combined immunodeficiency with autoimmunity and spondylometaphyseal dysplasia","type":"exact"},{"name":"spondyloenchondrodysplasia","type":"exact"},{"name":"spondyloenchondrodysplasia with immune dysregulation","type":"exact"},{"name":"spondyloenchondromatosis","type":"exact"},{"name":"spondylometaphyseal dysplasia with combined immunodeficiency","type":"exact"},{"name":"spondylometaphyseal dysplasia with enchondromatous changes","type":"exact"}],"termid":"MONDO:0011939","xrefs":{"Monarch":{"xref_id":"0011939"}}}


id: PBO:0054411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1807","termid":"PBO:0054411"}


id: PBO:0029906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_dimethylation_at_centromere_outer_repeat","termid":"PBO:0029906"}


id: FYPO:0000619
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121385],"is_not":false,"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[121386],"is_not":false,"summary":null,"term":"FYPO:0000619"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in anaphase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":2,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"abnormal cell cycle arrest in mitotic anaphase","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04284"],"single_locus_genotype_uniquenames":["nup61delta"],"synonyms":[{"name":"abnormal cell cycle arrest in anaphase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase with condensed chromosomes","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in anaphase","type":"exact"},{"name":"mitotic cell cycle progression in late anaphase: arrested","type":"narrow"}],"termid":"FYPO:0000619","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: GO:0000702
data:
  {"annotated_genes":["SJAG_03724","SJAG_02261","SJAG_01119"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[98031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"},{"annotations":[75337,98032,76072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of oxidized bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"oxidized base lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000702","terms_by_termid":{"GO:0034039":null,"GO:0034042":null,"GO:0034043":null}}


id: PBO:0017745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1-type Uba5 (predicted)","termid":"PBO:0017745"}


id: GO:0034032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a purine nucleoside bisphosphate, a compound consisting of a purine base linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside bisphosphate metabolic process","synonyms":[{"name":"purine nucleoside bisphosphate metabolism","type":"exact"}],"termid":"GO:0034032"}


id: MONDO:0010111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Odontotrichomelic syndrome is characterized by malformations of all four extremities, hypoplastic nails, ear anomalies, hypotrichosis, abnormal dentition, hyperhidrosis and nasolacrimal duct obstruction. So far, it has been described in less than 10 patients. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"odontotrichomelic syndrome","secondary_identifiers":["OMIM:273400","GARD:2381","UMLS:C2930960","MESH:C535637","SCTID:239028001","MEDGEN:443944","icd11.foundation:1999951139"],"synonyms":[{"name":"Freire-Maia odontotrichomelic syndrome","type":"exact"},{"name":"Freire-Maia syndrome","type":"exact"},{"name":"odontotrichomelic hypohidrotic dysplasia","type":"exact"},{"name":"odontotrichomelic syndrome","type":"exact"},{"name":"tetramelic deficiencies, ectodermal dysplasia, deformed ears, and other abnormalities","type":"exact"}],"termid":"MONDO:0010111","xrefs":{"Monarch":{"xref_id":"0010111"}}}


id: GO:1900519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to pullulan.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to pullulan","termid":"GO:1900518"},{"relation_name":"negatively_regulates","term_name":"response to pullulan","termid":"GO:0044592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to pullulan","synonyms":[{"name":"down regulation of response to pullulan","type":"exact"},{"name":"down-regulation of response to pullulan","type":"exact"},{"name":"downregulation of response to pullulan","type":"exact"},{"name":"inhibition of response to pullulan","type":"narrow"}],"termid":"GO:1900519"}


id: MONDO:0014004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 4","secondary_identifiers":["OMIM:615007","MEDGEN:767235","UMLS:C3554321","GARD:15893"],"synonyms":[{"name":"IBGC4","type":"related"},{"name":"basal ganglia calcification, idiopathic, 4","type":"exact"},{"name":"basal ganglia calcification, idiopathic, type 4","type":"exact"}],"termid":"MONDO:0014004","xrefs":{"Monarch":{"xref_id":"0014004"}}}


id: GO:0017125
data:
  {"annotated_genes":["SJAG_03906"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72202],"is_not":false,"summary":null,"term":"GO:0017125"}]},"cv_name":"molecular_function","definition":"Catalysis of the insertion of a dCMP residue opposite a template abasic site in DNA.","definition_xrefs":["PMID:10535901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"deoxycytidyl transferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0019986","Reactome:R-HSA-110308"],"synonyms":[{"name":"deoxycytidyl transferase activity, template-dependent","type":"narrow"}],"termid":"GO:0017125","terms_by_termid":{"GO:0017125":null}}


id: MONDO:0015071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine neoplasm that involves the middle ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"neoplasm of middle ear","termid":"MONDO:0021366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle ear neuroendocrine tumor","secondary_identifiers":["MEDGEN:931137","SCTID:717918002","UMLS:C4305468","icd11.foundation:1437498002","GARD:19759","Orphanet:100084"],"synonyms":[{"name":"middle ear NET","type":"exact"},{"name":"middle ear neuroendocrine neoplasm","type":"exact"},{"name":"middle ear neuroendocrine tumor","type":"exact"},{"name":"middle ear neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"neuroendocrine neoplasm of middle ear","type":"exact"},{"name":"neuroendocrine tumor of middle ear","type":"exact"},{"name":"neuroendocrine tumour of middle ear","type":"exact"}],"termid":"MONDO:0015071","xrefs":{"Monarch":{"xref_id":"0015071"}}}


id: MONDO:0017304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Albinism affecting the eye in which pigment of the hair and skin is normal or only slightly diluted. The classic type is X-linked (Nettleship-Falls), but an autosomal recessive form also exists. Ocular abnormalities may include reduced pigmentation of the iris, nystagmus, photophobia, strabismus, and decreased visual acuity.","definition_xrefs":["MESH:D016117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of melanin metabolism","termid":"MONDO:0018134"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"ocular albinism","secondary_identifiers":["UMLS:C0078917","GARD:21124","MedDRA:10065276","HP:0001107","MEDGEN:38147","Orphanet:284804","NORD:1516","icd11.foundation:1147926040","ICD9:270.2","DOID:0050633","SCTID:26399002"],"synonyms":[{"name":"XLOA","type":"narrow"},{"name":"ocular albinism","type":"exact"},{"name":"ocular albinism (disease)","type":"exact"}],"termid":"MONDO:0017304","xrefs":{"Monarch":{"xref_id":"0017304"}}}


id: FYPO:0001750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of homocitrate synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}


id: PBO:0082689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes; HAT/Core module also contains Gcn5p, Ngg1p, and Ada2p; binds methylated histone H3K4; involved in transcriptional regulation through SAGA and TBP recruitment to target promoters and H3 acetylation","termid":"PBO:0082689"}


id: GO:0052514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the inflammatory response of a symbiont organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont inflammatory response (obsolete GO:0052514)","synonyms":[{"name":"positive regulation by organism of symbiont inflammatory response","type":"exact"}],"termid":"GO:0052514"}


id: PBO:0041491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 42","termid":"PBO:0041491"}


id: SO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"engineered_gene","termid":"SO:0000280"},{"relation_name":"is_a","term_name":"foreign_gene","termid":"SO:0000285"},{"relation_name":"is_a","term_name":"engineered_foreign_region","termid":"SO:0000805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_gene","synonyms":[{"name":"engineered foreign gene","type":"exact"}],"termid":"SO:0000281"}


id: MOD:01282
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:15541752","Unimod:206#H","PubMed:10825247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrolein addition +56","termid":"MOD:00557"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +56 - site H","synonyms":[{"name":"Acrolein addition +56","type":"related"},{"name":"Delta:H(4)C(3)O(1)","type":"related"}],"termid":"MOD:01282"}


id: PBO:0080937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY2 transcription factor","termid":"PBO:0080937"}


id: FYPO:0002262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated cell","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, elongated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated cell","type":"exact"}],"termid":"FYPO:0002262"}


id: GO:0047839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dATP + depurinated DNA = ribose triphosphate + DNA.","definition_xrefs":["EC:2.6.99.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"dATP(dGTP)-DNA purinetransferase activity","secondary_identifiers":["MetaCyc:DATPDGTP--DNA-PURINE-TRANSFERASE-RXN"],"synonyms":[{"name":"dATP(dGTP)--DNA purine transferase activity","type":"exact"},{"name":"dATP(dGTP):depurinated-DNA purine transferase activity","type":"related"}],"termid":"GO:0047839"}


id: PBO:0076391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACR3 antisense RNA 1","termid":"PBO:0076391"}


id: GO:0048696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of collateral sprouting in the absence of injury.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of collateral sprouting","termid":"GO:0048670"},{"relation_name":"regulates","term_name":"collateral sprouting in absence of injury","termid":"GO:0048669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collateral sprouting in absence of injury","termid":"GO:0048696"}


id: PBO:0038462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 2","termid":"PBO:0038462"}


id: PBO:0040447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10A (putative)","termid":"PBO:0040447"}


id: PATO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to rise or float in a fluid medium such as water or air.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"buoyancy","termid":"PATO:0001420"}


id: MONDO:0007541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometriosis, susceptibility to, 1","secondary_identifiers":["MEDGEN:338749","OMIM:131200","UMLS:C1851649"],"synonyms":[{"name":"ENDO1","type":"related"},{"name":"endometriosis, susceptibility to, 1","type":"exact"},{"name":"endometriosis, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0007541","xrefs":{"Monarch":{"xref_id":"0007541"}}}


id: FYPO:0007969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form mitotic spindle microtubules that are longer than normal, extend beyond the spindle pole body and are present transiently. The protruding spindle microtubules are surrounded by an extension of the nuclear envelope.","definition_xrefs":["PMID:26031557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle microtubules protruding beyond spindle pole body","termid":"FYPO:0003787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0005447","FYPO:0002403","FYPO:0000054","FYPO:0001320","FYPO:0000120"],"is_obsolete":false,"name":"short-lived long mitotic spindle microtubules protruding beyond spindle pole body","secondary_identifiers":["PomBase:mlr"],"termid":"FYPO:0007969"}


id: PBO:0040873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 1","termid":"PBO:0040873"}


id: GO:0009482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O.","definition_xrefs":["EC:1.9.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete ba3-type cytochrome c oxidase (obsolete GO:0009482)","synonyms":[{"name":"ba3-type cytochrome c oxidase","type":"exact"}],"termid":"GO:0009482"}


id: MONDO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"deficiency anemia","termid":"MONDO:0001639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"protein-deficiency anemia","secondary_identifiers":["SCTID:191156009","ICD10CM:D53.0","ICD9:281.4","MEDGEN:509568","UMLS:C0154290","DOID:13120"],"synonyms":[{"name":"anaemia due to protein deficiency","type":"exact"},{"name":"anemia due to protein deficiency","type":"exact"}],"termid":"MONDO:0001638","xrefs":{"Monarch":{"xref_id":"0001638"}}}


id: PBO:0065481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2","termid":"PBO:0065481"}


id: MONDO:1011093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypospadias that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias, non-human animal","termid":"MONDO:1010269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias, cattle","secondary_identifiers":["OMIA:001187-9913"],"termid":"MONDO:1011093","xrefs":{"Monarch":{"xref_id":"1011093"}}}


id: GO:0048077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of a pattern of pigment in the compound eye.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of eye pigmentation","termid":"GO:0048074"},{"relation_name":"is_a","term_name":"regulation of compound eye pigmentation","termid":"GO:0048076"},{"relation_name":"negatively_regulates","term_name":"compound eye pigmentation","termid":"GO:0048072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye pigmentation","synonyms":[{"name":"down regulation of eye pigmentation","type":"broad"},{"name":"down-regulation of eye pigmentation","type":"broad"},{"name":"downregulation of eye pigmentation","type":"broad"},{"name":"inhibition of eye pigmentation","type":"broad"},{"name":"negative regulation of eye pigmentation","type":"broad"}],"termid":"GO:0048077"}


id: GO:0075305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which the symbiont regulates the increase in its size or mass, or its progression from an initial condition to a later condition, on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of growth or development of symbiont on or near host (obsolete GO:0075305)","synonyms":[{"name":"modulation of growth or development of symbiont on or near host","type":"exact"},{"name":"modulation of growth or development of symbiont on or near host surface","type":"exact"}],"termid":"GO:0075305"}


id: MONDO:0004023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatoblastoma (obsolete MONDO:0004023)","termid":"MONDO:0004023","xrefs":{"Monarch":{"xref_id":"0004023"}}}


id: PATO:0001766
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a cell by virtue of its anisotropic intracellular organization.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001766 cellular polarity (obsolete PATO:0001766)","termid":"PATO:0001766"}


id: GO:0099126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex acting as ligand of the transforming growth factor beta receptor complex, typically a homodimer of any of the TFGbeta isoforms. The precursor of TGFbeta proteins is cleaved into mature TGFbeta and the latency-associated peptide (LAP), which remains non-covalently linked to mature TGFbeta rendering it inactive. TGFbeta is activated by dimerization and dissociation of the LAP.","definition_xrefs":["PMID:22943793","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transforming growth factor beta complex","synonyms":[{"name":"TGF-beta complex","type":"exact"},{"name":"TGF-beta dimer","type":"exact"},{"name":"TGFB complex","type":"exact"},{"name":"TGFB dimer","type":"exact"},{"name":"TGFbeta complex","type":"exact"},{"name":"TGFbeta dimer","type":"exact"}],"termid":"GO:0099126"}


id: PBO:0041964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 7","termid":"PBO:0041964"}


id: PBO:0066879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 179","termid":"PBO:0066879"}


id: PBO:0042215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L2 pseudogene 1","termid":"PBO:0042215"}


id: FYPO:0001158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular pH","synonyms":[{"name":"normal cellular pH during mitotic cell cycle","type":"related"},{"name":"normal cellular pH during vegetative growth","type":"exact"},{"name":"normal cellular pH level","type":"exact"}],"termid":"FYPO:0001158"}


id: PBO:0060135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 36","termid":"PBO:0060135"}


id: PBO:0048803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 3","termid":"PBO:0048803"}


id: GO:0042070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the oocyte nucleus in a particular position within the cell during the establishment and maintenance of the axes of the oocyte. An example of this process is found In Drosophila melanogaster.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of nucleus location","termid":"GO:0051658"},{"relation_name":"is_a","term_name":"oocyte nucleus localization involved in oocyte dorsal/ventral axis specification","termid":"GO:0051663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of oocyte nucleus location involved in oocyte dorsal/ventral axis specification","secondary_identifiers":["GO:0048127"],"synonyms":[{"name":"maintenance of oocyte nucleus localization during oocyte axis determination","type":"broad"},{"name":"maintenance of oocyte nucleus location involved in oocyte dorsal-ventral axis specification","type":"exact"},{"name":"maintenance of oocyte nucleus location involved in oocyte dorsal/ventral axis determination","type":"exact"},{"name":"maintenance of oocyte nucleus location involved in oocyte dorsoventral axis specification","type":"exact"},{"name":"maintenance of oocyte nucleus position during oocyte axis determination","type":"broad"},{"name":"oocyte axis determination, maintenance of oocyte nucleus localization","type":"broad"},{"name":"oocyte axis determination, maintenance of oocyte nucleus position","type":"broad"},{"name":"oocyte axis determination, oocyte nucleus anchoring","type":"broad"},{"name":"oocyte nucleus anchoring during oocyte axis determination","type":"broad"}],"termid":"GO:0042070"}


id: GO:0016227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-cysteine + 'activated' tRNA = L-serine + tRNA containing a thionucleotide.","definition_xrefs":["EC:2.8.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA sulfurtransferase activity (obsolete GO:0016227)","synonyms":[{"name":"L-cysteine:tRNA sulfurtransferase activity","type":"related"},{"name":"RNA sulfurtransferase activity","type":"related"},{"name":"ribonucleate sulfurtransferase activity","type":"related"},{"name":"tRNA sulfurtransferase activity","type":"exact"},{"name":"tRNA sulphurtransferase activity","type":"exact"},{"name":"transfer RNA sulfurtransferase activity","type":"related"},{"name":"transfer RNA thiolase activity","type":"related"},{"name":"transfer ribonucleate sulfurtransferase activity","type":"related"}],"termid":"GO:0016227"}


id: PBO:0082504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of i-AAA protease complex; complex is located in mitochondrial inner membrane; responsible for degradation of unfolded or misfolded mitochondrial gene products; serves as nonconventional translocation motor to pull PNPase into intermembrane space; also has role in intermembrane space protein folding; mutation causes elevated rate of mitochondrial turnover; human homolog YME1L1 can complement yeast null mutant","termid":"PBO:0082504"}


id: PATO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A weight which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"weight","termid":"PATO:0000128"},{"relation_name":"is_a","term_name":"decreased force","termid":"PATO:0002246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased weight","synonyms":[{"name":"light weight","type":"exact"},{"name":"low weight","type":"exact"}],"termid":"PATO:0000583"}


id: GO:0070054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Splicing of mRNA substrates via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0000394"},{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mRNA splicing, via endonucleolytic cleavage and ligation","secondary_identifiers":["GO:0061012"],"synonyms":[{"name":"cytosolic mRNA splicing","type":"related"}],"termid":"GO:0070054"}


id: PBO:0059655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 21","termid":"PBO:0059655"}


id: PATO:0000973
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's disposition to admit the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porosity","termid":"PATO:0000973"}


id: MONDO:0012070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant Charcot-Marie-Tooth disease type 2G (obsolete MONDO:0012070)","termid":"MONDO:0012070","xrefs":{"Monarch":{"xref_id":"0012070"}}}


id: FYPO:0001054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis when longer than wild type, and then septates to give rise to a cut phenotype. In a cut phenotype, a cell undergoes septation despite abnormal mitosis such that the septum physically divides the nucleus into two parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"has_part","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001320","FYPO:0000004","FYPO:0005447","FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0000005","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"cut, elongated cell","synonyms":[{"name":"cut following delayed onset of mitosis","type":"exact"},{"name":"cut with mitotic catastrophe, elongated cell","type":"related"},{"name":"cut, elongated cell during mitotic cell cycle","type":"related"},{"name":"cut, elongated cell during vegetative growth","type":"exact"},{"name":"cut, long cell","type":"exact"},{"name":"elongated cut cell","type":"exact"},{"name":"mitotic catastrophe with cut, elongated cell","type":"related"},{"name":"septation following abnormal nuclear division, long cell","type":"exact"}],"termid":"FYPO:0001054"}


id: FYPO:0000408
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121319,121320,121318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more cell cycle phases is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle phase","termid":"FYPO:0002735"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of cell cycle phase","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_03351","SJAG_03575"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle progression: decreased rate","type":"related"},{"name":"decreased rate of cell cycle progression","type":"related"},{"name":"prolonged cell cycle phase","type":"exact"},{"name":"reduced rate of cell cycle progression","type":"related"}],"termid":"FYPO:0000408","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: PBO:0027932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_glucose_starvation","termid":"PBO:0027932"}


id: PBO:0082668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cytosolic Fe-S protein assembly (CIA) machinery; contains an Fe-S cluster that receives electrons from NADPH via the action of Tah18p in an early step in the CIA pathway; ortholog of human Ciapin1; protein abundance increases in response to DNA replication stress; inviability of the null mutant is functionally complemented by human CIAPIN1","termid":"PBO:0082668"}


id: PBO:0027574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_morphology_during_mitosis","termid":"PBO:0027574"}


id: PBO:0072891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strawberry notch homolog 2","termid":"PBO:0072891"}


id: PBO:0061989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 11","termid":"PBO:0061989"}


id: MOD:00852
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with one (18)O.","definition_xrefs":["PubMed:8382902","Unimod:366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O labeled deamidated residue","termid":"MOD:00851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}


id: GO:0097281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to an immune complex. Immune complexes are clusters of antibodies bound to antigen, to which complement may also be fixed, and which may precipitate or remain in solution. Examples are the clumping of cells such as bacteria or red blood cells in the presence of an antibody, precipitation of a toxin after an antibody binds to it, and clumping of viral particles as a result of antibody binding to the virus.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex formation","synonyms":[{"name":"antibody-mediated agglutination","type":"exact"}],"termid":"GO:0097281"}


id: PBO:0088376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoenolpyruvate transmembrane transporter Pet2","termid":"PBO:0088376"}


id: PBO:0041687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin related polypeptide beta","termid":"PBO:0041687"}


id: GO:0120221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the planar beating pattern of ciliary movement pattern. Connection between the outer doublets and the central pair via the radial spokes constrains ciliary movement to the planar beating pattern. Cilia that lack this connection, such as those in the embryonic node or Kupfer's vesicle, display radial movement.","definition_xrefs":["PMID:26506310","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium movement","termid":"GO:0003352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of ciliary planar beating movement pattern","termid":"GO:0120221"}


id: PBO:0057040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 132","termid":"PBO:0057040"}


id: MONDO:0021281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cavernous hemangioma that involves the retina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cavernous hemangioma of face","termid":"MONDO:0003645"},{"relation_name":"is_a","term_name":"hemangioma of retina","termid":"MONDO:0021541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005570"],"is_obsolete":false,"name":"cavernous hemangioma of retina","secondary_identifiers":["MEDGEN:152678","SCTID:312937006","NCIT:C4921","UMLS:C0730304"],"synonyms":[{"name":"cavernous angioma of retina","type":"exact"},{"name":"cavernous angioma of the retina","type":"exact"},{"name":"cavernous hemangioma of the retina","type":"exact"},{"name":"retina cavernous angioma","type":"exact"},{"name":"retina cavernous hemangioma","type":"exact"},{"name":"retinal cavernous angioma","type":"exact"},{"name":"retinal cavernous hemangioma","type":"exact"}],"termid":"MONDO:0021281","xrefs":{"Monarch":{"xref_id":"0021281"}}}


id: PBO:0055570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3006","termid":"PBO:0055570"}


id: PBO:0056403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 1","termid":"PBO:0056403"}


id: PBO:0065177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROP paired-like homeobox 1","termid":"PBO:0065177"}


id: MONDO:0032751
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88960,88961],"is_not":false,"summary":null,"term":"MONDO:0032751"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Sheldon-hall syndrome","termid":"MONDO:0011128"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"arthrogryposis, distal, type 2B3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618436","DOID:0111602","MEDGEN:1676839","UMLS:C5193098"],"synonyms":[{"name":"DA2B3","type":"exact"},{"name":"arthrogryposis, distal, type 2B3","type":"exact"},{"name":"arthrogryposis, distal, type 2B3 (Sheldon-Hall)","type":"exact"},{"name":"distal arthrogryposis type 2B3 (Sheldon-Hall)","type":"exact"}],"termid":"MONDO:0032751","terms_by_termid":{"MONDO:0032751":null},"xrefs":{"Monarch":{"xref_id":"0032751"}}}


id: MONDO:0004239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of cervical squamous cell carcinoma characterized by the presence of keratin pearls. Intercellular bridges and cytoplasmic keratinization are usually present.","definition_xrefs":["NCIT:C40187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratinizing squamous cell carcinoma","termid":"MONDO:0005056"},{"relation_name":"is_a","term_name":"cervical squamous cell carcinoma","termid":"MONDO:0006143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical keratinizing squamous cell carcinoma","secondary_identifiers":["MEDGEN:309255","UMLS:C1517658","DOID:7483"],"synonyms":[{"name":"cervical keratinizing squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004239","xrefs":{"Monarch":{"xref_id":"0004239"}}}


id: GO:0141084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signal transduction pathway that starts with a ligand binding to a pattern recognition receptor (PRR), assembly of the inflammasome complex, leading to the activation of CASP1 and inducing an inflammatory response. In some cases, inflammasome-mediated signal transduction can lead to programmed cell death, such as pyroptosis.","definition_xrefs":["PMID:35883561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"},{"relation_name":"part_of","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"inflammasome-mediated signaling pathway","synonyms":[{"name":"inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141084"}


id: PBO:0078843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 5-1","termid":"PBO:0078843"}


id: PBO:0028250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cytokinesis","termid":"PBO:0028250"}


id: GO:0075106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont modulates the frequency, rate or extent of the host adenylate cyclase activity, which involves catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host adenylate cyclase activity (obsolete GO:0075106)","synonyms":[{"name":"Modulation by symbiont of host 3',5'-cyclic AMP synthetase activity","type":"exact"},{"name":"Modulation by symbiont of host ATP diphosphate-lyase (cyclizing ; 3',5'-cyclic-AMP-forming) activity","type":"exact"},{"name":"Modulation by symbiont of host ATP diphosphate-lyase (cyclizing) activity","type":"exact"},{"name":"Modulation by symbiont of host ATP pyrophosphate-lyase activity","type":"exact"},{"name":"Modulation by symbiont of host adenyl cyclase activity","type":"exact"},{"name":"Modulation by symbiont of host adenylyl cyclase activity","type":"exact"},{"name":"Modulation by symbiont of host adenylylcyclase activity","type":"exact"},{"name":"Modulation by symbiont of host cAMP generating peptide activity","type":"related"}],"termid":"GO:0075106"}


id: PBO:0072721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribitol xylosyltransferase 1","termid":"PBO:0072721"}


id: GO:0034492
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the hydrogenosome membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"hydrogenosome","termid":"GO:0042566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"hydrogenosome lumen","termid":"GO:0034492"}


id: PBO:0031731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiosis","termid":"PBO:0031731"}


id: PBO:0083598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; expression if heat-inducible; located in promoter region of essential CCT3 gene encoding a subunit of the cytosolic chaperonin Cct ring complex, overlaps ORF YJL016W","termid":"PBO:0083598"}


id: MONDO:0003103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign and malignant neoplasms arising from one or more of the cervical, thoracic, lumbar, sacral, or coccygeal nerve roots. The majority of these tumors are benign. Clinical manifestations may include pain, weakness and loss of sensation along the course of the involved nerve root. Large tumors may cause spinal cord compression.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve root neoplasm","secondary_identifiers":["MEDGEN:233753","UMLS:C1334946","NCIT:C5119","DOID:4698"],"synonyms":[{"name":"neoplasm of nerve Root","type":"exact"},{"name":"neoplasm of nerve root","type":"exact"},{"name":"neoplasm of the nerve Root","type":"exact"},{"name":"neoplasms, nerve Root","type":"exact"},{"name":"nerve Root neoplasms","type":"exact"},{"name":"nerve Root tumor","type":"exact"},{"name":"nerve Root tumors","type":"exact"},{"name":"nerve Root tumour","type":"exact"},{"name":"nerve Root tumours","type":"exact"},{"name":"nerve root neoplasm (disease)","type":"exact"},{"name":"nerve root tumor","type":"exact"},{"name":"nerve root tumour","type":"exact"},{"name":"tumor of nerve Root","type":"exact"},{"name":"tumor of nerve root","type":"exact"},{"name":"tumor of the nerve Root","type":"exact"},{"name":"tumour of nerve Root","type":"exact"},{"name":"tumour of nerve root","type":"exact"},{"name":"tumour of the nerve Root","type":"exact"}],"termid":"MONDO:0003103","xrefs":{"Monarch":{"xref_id":"0003103"}}}


id: GO:0045018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from the vacuole to the trans-Golgi network; this occurs in yeast via the prevacuolar/endosomal compartment.","definition_xrefs":["PMID:9700156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"retrograde transport, vacuole to Golgi","synonyms":[{"name":"retrograde transport from the vacuole","type":"exact"}],"termid":"GO:0045018"}


id: GO:0098920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by a lipid ligand.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling","termid":"GO:0098917"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by lipid","termid":"GO:0099541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by lipid","termid":"GO:0098920"}


id: PBO:0078034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 24","termid":"PBO:0078034"}


id: PBO:0054001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1326","termid":"PBO:0054001"}


id: PBO:0086551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YER135C is not an essential gene","termid":"PBO:0086551"}


id: GO:0044600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + protein = diphosphate + guanylyl-protein; mediates the addition of an guanylyl (guanosine 5'-monophosphate; GMP group) to specific residues of target proteins.","definition_xrefs":["GOC:sp","PMID:20651120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"protein guanylyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9765952"],"termid":"GO:0044600"}


id: GO:0106046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of glyoxal from a glycated guanine, to form glycolate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"guanine deglycation, glyoxal removal","termid":"GO:0106046"}


id: GO:2001054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process","termid":"GO:2001053"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell apoptotic process","synonyms":[{"name":"negative regulation of mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:2001054"}


id: PBO:0061990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily BH member 1 pseudogene","termid":"PBO:0061990"}


id: PBO:0109075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16 like (pseudogene)","termid":"PBO:0109075"}


id: PBO:0116799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differentiation and growth arrest related lncRNA","termid":"PBO:0116799"}


id: MONDO:0004397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma that arises from the posterior mediastinum. It is characterized by the presence of psammoma bodies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinal schwannoma","termid":"MONDO:0004398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign mediastinal psammomatous neurilemmoma","secondary_identifiers":["DOID:7921","MEDGEN:231937","NCIT:C6636","UMLS:C1332513"],"synonyms":[{"name":"benign mediastinal psammomatous schwannoma","type":"exact"},{"name":"benign psammomatous neurilemmoma of mediastinum","type":"exact"},{"name":"benign psammomatous neurilemmoma of the mediastinum","type":"exact"},{"name":"benign psammomatous schwannoma of mediastinum","type":"exact"},{"name":"benign psammomatous schwannoma of the mediastinum","type":"exact"}],"termid":"MONDO:0004397","xrefs":{"Monarch":{"xref_id":"0004397"}}}


id: GO:0075202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont penetration hypha formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"regulates","term_name":"penetration hypha formation","termid":"GO:0075201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of penetration hypha formation","synonyms":[{"name":"modulation of symbiont penetration hypha formation for entry into host","type":"exact"}],"termid":"GO:0075202"}


id: MONDO:0006085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lipoma with prominent vascularity. The vascular tissue is more abundant at the periphery of the tumor and contains fibrin thrombi. It occurs more frequently in younger individuals as a painful subcutaneous nodule, often on the arms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiolipoma","secondary_identifiers":["NCIT:C3733","MESH:D018206","MEDGEN:64621","SCTID:404057003","DOID:3616","ICDO:8861/0","EFO:1000085","UMLS:C0206632"],"synonyms":[{"name":"angiolipoma, benign","type":"exact"}],"termid":"MONDO:0006085","xrefs":{"Monarch":{"xref_id":"0006085"}}}


id: PBO:0072886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding kinase 1","termid":"PBO:0072886"}


id: MONDO:0004521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid sarcoma occurring in adults.","definition_xrefs":["NCIT:C7944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelioid sarcoma","termid":"MONDO:0017387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult epithelioid sarcoma","secondary_identifiers":["MEDGEN:124631","UMLS:C0279545","DOID:8282"],"synonyms":[{"name":"adult epithelioid sarcoma","type":"exact"},{"name":"epithelioid sarcoma","type":"broad"},{"name":"epithelioid sarcoma of adults","type":"exact"}],"termid":"MONDO:0004521","xrefs":{"Monarch":{"xref_id":"0004521"}}}


id: PBO:0072777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC3 domain containing 1","termid":"PBO:0072777"}


id: GO:0035392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The maintenance of chromatin in a transcriptionally silent state such as heterochromatin at the telomere.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of chromatin silencing at telomere (obsolete GO:0035392)","termid":"GO:0035392"}


id: GO:0046366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of allose, allo-hexose, an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete allose biosynthetic process (obsolete GO:0046366)","synonyms":[{"name":"allose anabolism","type":"exact"},{"name":"allose biosynthesis","type":"exact"},{"name":"allose formation","type":"exact"},{"name":"allose synthesis","type":"exact"}],"termid":"GO:0046366"}


id: MONDO:0003042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mesenchymal chondrosarcoma occurring in adults.","definition_xrefs":["NCIT:C27375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal chondrosarcoma","termid":"MONDO:0006853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult mesenchymal chondrosarcoma","secondary_identifiers":["DOID:4547","MEDGEN:272296","UMLS:C1332207"],"synonyms":[{"name":"adult mesenchymal chondrosarcoma","type":"exact"},{"name":"mesenchymal chondrosarcoma of adults","type":"exact"}],"termid":"MONDO:0003042","xrefs":{"Monarch":{"xref_id":"0003042"}}}


id: PBO:0071862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3A","termid":"PBO:0071862"}


id: PBO:0000600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Upf1","termid":"PBO:0000600"}


id: PBO:0048553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-fructose oxidoreductase domain containing 2","termid":"PBO:0048553"}


id: PBO:0073681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 3","termid":"PBO:0073681"}


id: MONDO:0009290
data:
  {"annotated_genes":["SJAG_02131","SJAG_03824"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87065,87066],"is_not":false,"summary":null,"term":"MONDO:0009290"}]},"cv_name":"mondo","definition":"Glycogen storage disease due to acid maltase deficiency (AMD) is an autosomal recessive trait leading to metabolic myopathy that affects cardiac and respiratory muscles in addition to skeletal muscle and other tissues. AMD represents a wide spectrum of clinical presentations caused by an accumulation of glycogen in lysosomes: Glycogen storage disease due to acid maltase deficiency, infantile onset, non-classic infantile onset and adult onset. Early onset forms are more severe and often fatal.","definition_xrefs":["Orphanet:365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"},{"relation_name":"is_a","term_name":"lysosomal glycogen storage disease","termid":"MONDO:0017738"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0037792","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1595","OMIM:232300","NCIT:C84734","NANDO:1200138","NANDO:2200569","GARD:5714","MEDGEN:5340","DOID:2752","MedDRA:10053185","NANDO:1200825","SCTID:274864009","UMLS:C0017921"],"synonyms":[{"name":"Aglucosidase alfa","type":"related"},{"name":"Alpha-1,4-glucosidase acid deficiency","type":"exact"},{"name":"Alpha-1,4-glucosidase deficiency","type":"related"},{"name":"Cardiomegalia Glycogenica diffusa","type":"related"},{"name":"GAA deficiency","type":"related"},{"name":"GAA glycogen storage disease","type":"exact"},{"name":"GSD 2","type":"related"},{"name":"GSD II","type":"related"},{"name":"GSD due to acid maltase deficiency","type":"exact"},{"name":"GSD type 2","type":"exact"},{"name":"GSD type II","type":"exact"},{"name":"GSD2","type":"related"},{"name":"Pompe Disease","type":"exact"},{"name":"Pompe disease","type":"exact"},{"name":"Pompe's disease","type":"exact"},{"name":"acid maltase deficiency","type":"exact"},{"name":"acid maltase deficiency disease","type":"related"},{"name":"deficiency of alpha-glucosidase","type":"related"},{"name":"deficiency of glucoamylase","type":"exact"},{"name":"deficiency of lysosomal alpha-glucosidase","type":"related"},{"name":"deficiency of maltase","type":"exact"},{"name":"generalised glycogenosis","type":"exact"},{"name":"generalized glycogenosis","type":"exact"},{"name":"glucosidase acid-1,4-alpha deficiency","type":"related"},{"name":"glycogen storage disease 2","type":"related"},{"name":"glycogen storage disease II","type":"exact"},{"name":"glycogen storage disease caused by mutation in GAA","type":"exact"},{"name":"glycogen storage disease due to acid maltase deficiency","type":"related"},{"name":"glycogen storage disease type 2","type":"exact"},{"name":"glycogen storage disease type II","type":"exact"},{"name":"glycogen storage disease, type II","type":"exact"},{"name":"glycogenosis due to acid maltase deficiency","type":"exact"},{"name":"glycogenosis type 2","type":"exact"},{"name":"glycogenosis type II","type":"exact"},{"name":"glycogenosis, generalized, Cardiac form","type":"related"},{"name":"glycogenosis, type 2","type":"exact"},{"name":"lysosomal alpha-1,4-glucosidase deficiency","type":"exact"}],"termid":"MONDO:0009290","terms_by_termid":{"MONDO:0009290":null},"xrefs":{"Monarch":{"xref_id":"0009290"}}}


id: GO:1902816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to microtubule.","definition_xrefs":["GOC:TermGenie","GOC:vw","PMID:23087209","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to microtubule","termid":"GO:0035372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to microtubule","synonyms":[{"name":"regulation of protein localisation to microtubule","type":"exact"}],"termid":"GO:1902816"}


id: PBO:0065251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20D","termid":"PBO:0065251"}


id: PR:Q9P792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nbr1 gene.","definition_xrefs":["UniProtKB:Q9P792","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZZ-type zinc finger-containing protein P35G2.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.11c","synonyms":[{"name":"Spom972h-nbr1","type":"exact"}],"termid":"PR:Q9P792"}


id: PBO:0029474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_volume_septated_spheroid_vegetative_cell","termid":"PBO:0029474"}


id: MONDO:0100068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SLC10A7 deficiency is characterized by compound heterozygous mutations in the SLC10A7 gene, a gene of unknown function in humans. It combines overlapping clinical phenotypes characterized by short stature, defective enamel formation (amelogenesis imperfecta), skeletal dysplasia, facial dysmorphism, moderate hearing impairment and mildly impaired intellectual developmen.","definition_xrefs":["PMID:29878199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"SLC10A7-congenital disorder of glycosylation","synonyms":[{"name":"SLC10A7 deficiency","type":"exact"},{"name":"SLC10A7-CDG","type":"exact"},{"name":"SLC10A7-congenital disorder of glycosylation","type":"exact"}],"termid":"MONDO:0100068","xrefs":{"Monarch":{"xref_id":"0100068"}}}


id: GO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 36 of histone H3.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K36 methylation (obsolete GO:0000414)","termid":"GO:0000414"}


id: FYPO:0006747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal, distal to the side of the nucleus near the old cell end.","definition_xrefs":["PMID:8876193","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric mitochondrial aggregation","termid":"FYPO:0003811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"asymmetric mitochondrial aggregation at old end","synonyms":[{"name":"asymmetric mitochondrial aggregation at old cell end","type":"exact"},{"name":"asymmetric mitochondrial aggregation at old cell tip","type":"exact"},{"name":"asymmetric mitochondrial aggregation at old end during mitotic cell cycle","type":"related"},{"name":"asymmetric mitochondrial aggregation at old end during vegetative growth","type":"exact"},{"name":"mitochondria localized to one cell end","type":"related"},{"name":"monopolar intracellular mitochondrion distribution","type":"related"},{"name":"monopolar intracellular mitochondrion localisation","type":"related"},{"name":"monopolar intracellular mitochondrion localization","type":"related"},{"name":"monopolar mitochondrial aggregation","type":"related"},{"name":"monopolar mitochondrion distribution","type":"related"}],"termid":"FYPO:0006747"}


id: GO:2001170
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"negative regulation of ATP metabolic process","termid":"GO:1903579"},{"relation_name":"is_a","term_name":"regulation of ATP biosynthetic process","termid":"GO:2001169"},{"relation_name":"negatively_regulates","term_name":"ATP biosynthetic process","termid":"GO:0006754"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"negative regulation of ATP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of ATP anabolism","type":"exact"},{"name":"negative regulation of ATP biosynthesis","type":"exact"},{"name":"negative regulation of ATP formation","type":"exact"},{"name":"negative regulation of ATP regeneration","type":"related"},{"name":"negative regulation of ATP synthesis","type":"exact"}],"termid":"GO:2001170","terms_by_termid":{"GO:1905707":null}}


id: GO:0004200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete signaling (initiator) caspase activity (obsolete GO:0004200)","synonyms":[{"name":"signaling (initiator) caspase activity","type":"exact"},{"name":"signalling (initiator) caspase activity","type":"exact"}],"termid":"GO:0004200"}


id: PBO:0065298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 2","termid":"PBO:0065298"}


id: GO:0031684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular events that generate a signal through the activation of G-protein subunits and recycling of these subunits.","definition_xrefs":["GOC:nln"],"gene_count":0,"genotype_count":0,"name":"obsolete heterotrimeric G-protein complex cycle (obsolete GO:0031684)","termid":"GO:0031684"}


id: PBO:0059526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded 12S rRNA","termid":"PBO:0059526"}


id: PBO:0069375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 635, pseudogene","termid":"PBO:0069375"}


id: GO:0005416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + cation(out) = amino acid(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"amino acid:monoatomic cation symporter activity","synonyms":[{"name":"amino acid:cation symporter activity","type":"broad"},{"name":"cation/amino acid symporter activity","type":"exact"},{"name":"cation:amino acid symporter activity","type":"exact"}],"termid":"GO:0005416"}


id: PBO:0027672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_spore_with_abnormal_shape","termid":"PBO:0027672"}


id: GO:0045548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine = NH4 + trans-cinnamate.","definition_xrefs":["RHEA:21384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"phenylalanine ammonia-lyase activity","secondary_identifiers":["EC:4.3.1.24"],"synonyms":[{"name":"L-phenylalanine ammonia-lyase activity","type":"related"},{"name":"PAL activity","type":"broad"},{"name":"phe ammonia-lyase activity","type":"related"},{"name":"phenylalanine ammonium-lyase activity","type":"related"},{"name":"phenylalanine deaminase activity","type":"related"}],"termid":"GO:0045548"}


id: MONDO:0100523
data:
  {"annotated_genes":["SJAG_01530","SJAG_04566"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88333,88334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008438"}]},"cv_name":"mondo","definition":"Heterozygous variants in SPAST have been reported in relation to pure spastic paraplegias (infantile, ascending), complicated or complex spastic paraplegia (with dementia, cerebellar ataxia, epilepsy, and/or peripheral neuropathy) and cerebral palsy. Age of symptom onset ranges from neonatal to advanced age with varying symptom severity,","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01530":null,"SJAG_04566":null},"genotype_count":0,"is_obsolete":false,"name":"SPAST-related motor disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100523","terms_by_termid":{"MONDO:0008438":null},"xrefs":{"Monarch":{"xref_id":"0100523"}}}


id: PBO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.20","termid":"PBO:0001916"}


id: GO:0061658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of URM1 from one protein to another via the reaction X-URM1 + Y = Y-URM1 + X, where both the X-URM1 and Y-URM1 linkages are thioester bonds between the C-terminal amino acid of URM1 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"URM1 transferase activity","termid":"GO:0042294"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0019787","GO:0016740","GO:0016746","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"URM1 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061658"}


id: MONDO:0011232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial or sporadic hemiplegic migraine in which the cause of the disease is a mutation in the ATP1A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemiplegic migraine","termid":"MONDO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine, familial hemiplegic, 2","secondary_identifiers":["MEDGEN:355962","OMIM:602481","UMLS:C1865322","DOID:0111182","GARD:10095"],"synonyms":[{"name":"ATP1A2 familial or sporadic hemiplegic migraine","type":"exact"},{"name":"FHM2","type":"related"},{"name":"Mhp2","type":"related"},{"name":"familial hemiplegic migraine type 2","type":"related"},{"name":"familial or sporadic hemiplegic migraine caused by mutation in ATP1A2","type":"exact"},{"name":"hemiplegic migraine, familial type 2","type":"related"},{"name":"migraine, familial basilar","type":"related"},{"name":"migraine, familial hemiplegic, 2","type":"exact"},{"name":"migraine, familial hemiplegic, type 2","type":"exact"}],"termid":"MONDO:0011232","xrefs":{"Monarch":{"xref_id":"0011232"}}}


id: MONDO:0015365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of hereditary sensory and autonomic neuropathy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant hereditary sensory and autonomic neuropathy (obsolete MONDO:0015365)","secondary_identifiers":["Orphanet:140474"],"synonyms":[{"name":"hereditary sensory and autonomic neuropathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0015365","xrefs":{"Monarch":{"xref_id":"0015365"}}}


id: PBO:0043263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 22","termid":"PBO:0043263"}


id: SO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence motif is a short (up to 20 amino acids) region of biological interest. Such motifs, although they are too short to constitute functional domains, share sequence similarities and are conserved in different proteins. They display a common function (protein-binding, subcellular location etc.).","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_motif","secondary_identifiers":["BS:00032"],"synonyms":[{"name":"motif","type":"broad"},{"name":"polypeptide motif","type":"exact"}],"termid":"SO:0001067"}


id: PBO:0077517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 232","termid":"PBO:0077517"}


id: GO:0010895
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95746],"is_not":false,"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ergosterol.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ergosterol biosynthetic process","termid":"GO:0032443"},{"relation_name":"is_a","term_name":"negative regulation of sterol biosynthetic process","termid":"GO:0106119"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"ergosterol biosynthetic process","termid":"GO:0006696"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010895","terms_by_termid":{"GO:0010895":null}}


id: PBO:0078599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 12, Y-linked","termid":"PBO:0078599"}


id: PBO:0116305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination factor eRF3; has a role in mRNA deadenylation and decay; altered protein conformation creates the [PSI(+)] prion, self-perpetuating amyloid fibrils that modify cellular fitness, alter translational fidelity by affecting reading frame selection, and result in a nonsense suppressor phenotype; forms reversible liquid condensates in response to both acidic and osmotic stress to promote survival; many stress-response genes are repressed in the presence of [PSI(+)]","termid":"PBO:0116305"}


id: GO:0140956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl79-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl79-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of up to three methyl group to the lysine residue at position 79 of the histone H3 protein, producing H3K79me3.","definition_xrefs":["PMID:15371351","RHEA:60328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K79 methyltransferase activity","termid":"GO:0031151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0140096","GO:0016740","GO:0008276","GO:0003824"],"is_obsolete":false,"name":"histone H3K79 trimethyltransferase activity","secondary_identifiers":["EC:2.1.1.360"],"synonyms":[{"name":"histone H3-K79 trimethylation","type":"broad"},{"name":"histone H3K79 trimethylase activity","type":"exact"},{"name":"histone H3K79 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K79 specific)","type":"exact"},{"name":"histone trimethylase activity (H3-K79 specific)","type":"exact"},{"name":"histone trimethyltransferase activity (H3-K79 specific)","type":"exact"},{"name":"histone-H3K79 trimethyltransferase activity","type":"exact"}],"termid":"GO:0140956"}


id: GO:0006840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of alpha-ketoglutarate and malate into, out of or within a mitochondrion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial alpha-ketoglutarate/malate transport (obsolete GO:0006840)","synonyms":[{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"exact"},{"name":"mitochondrial oxoglutarate/malate transport","type":"exact"}],"termid":"GO:0006840"}


id: GO:0141145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the formation of neutrophil extracellular traps by the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:34108482","PMID:30038902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host neutrophil extracellular trap formation","synonyms":[{"name":"symbiont-mediated perturbation of host neutrophil extracellular trap formation","type":"related"},{"name":"symbiont-mediated suppression of host neutrophil extracellular traps formation","type":"exact"}],"termid":"GO:0141145"}


id: MONDO:0011044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectrodactyly of lower limbs, congenital heart defect, and micrognathia","secondary_identifiers":["MESH:C563344","MEDGEN:318626","OMIM:601348","UMLS:C1832441"],"synonyms":[{"name":"ectrodactyly of lower limbs, congenital heart defect, and micrognathia","type":"exact"}],"termid":"MONDO:0011044","xrefs":{"Monarch":{"xref_id":"0011044"}}}


id: MONDO:0006704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conditions characterized by loss or dysfunction of myelin (see myelin sheath) in the brain, spinal cord, or optic nerves secondary to autoimmune mediated processes. This may take the form of a humoral or cellular immune response directed toward myelin or oligodendroglia associated autoantigens.","definition_xrefs":["MESH:D020278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"CNS demyelinating autoimmune disease","secondary_identifiers":["UMLS:C0751873","EFO:1000870","MEDGEN:199756"],"termid":"MONDO:0006704","xrefs":{"Monarch":{"xref_id":"0006704"}}}


id: PBO:0073923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 12","termid":"PBO:0073923"}


id: PBO:0076914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 beta","termid":"PBO:0076914"}


id: PBO:0073702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"src kinase associated phosphoprotein 2","termid":"PBO:0073702"}


id: FYPO:0003115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of L-methionine (R)-S-oxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to L-methionine (R)-S-oxide","synonyms":[{"name":"resistance to L-methionine (R)-S-oxide during mitotic cell cycle","type":"related"},{"name":"resistance to L-methionine (R)-S-oxide during vegetative growth","type":"exact"},{"name":"resistant to L-methionine (R)-S-oxide","type":"exact"}],"termid":"FYPO:0003115"}


id: MONDO:0005751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute, febrile, infectious disease generally occurring in epidemics. It is usually caused by coxsackieviruses B and sometimes by coxsackieviruses A; echoviruses; or other enteroviruses.","definition_xrefs":["MESH:D011000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidemic pleurodynia","secondary_identifiers":["DOID:10882","MEDGEN:19355","ICD10CM:B33.0","SCTID:83264000","UMLS:C0032238","ICD9:074.1"],"synonyms":[{"name":"Bamble disease","type":"exact"},{"name":"Bornholm disease","type":"exact"},{"name":"devil's grip","type":"exact"},{"name":"epidemic myalgia","type":"exact"},{"name":"epidemic pleurisy","type":"exact"},{"name":"epidemic, myositis","type":"exact"}],"termid":"MONDO:0005751","xrefs":{"Monarch":{"xref_id":"0005751"}}}


id: GO:0000909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a fruiting body organ over time, from its formation to the mature structure. The fruiting body is a spore bearing structure. In fungi, the sporocarp (also known as fruiting body) is a multicellular structure on which spore-producing structures, such as basidia or asci, are borne. The fruiting body is part of the sexual phase of a fungal life cycle, with the rest of the life cycle being characterized by vegetative mycelial growth. The sporocarp of a basidiomycete is known as a basidiocarp, while the fruiting body of an ascomycete is known as an ascocarp. A significant range of different shapes and morphologies is found in both basidiocarps and ascocarps; these features play an important role in the identification and taxonomy of fungi.","definition_xrefs":["GOC:clt","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocarp development","termid":"GO:0030584"},{"relation_name":"part_of","term_name":"sexual reproduction","termid":"GO:0019953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocarp development involved in sexual reproduction","synonyms":[{"name":"ascus development","type":"narrow"},{"name":"fruiting body development involved in sexual reproduction","type":"broad"},{"name":"fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"perfect stage fruiting body development","type":"narrow"}],"termid":"GO:0000909"}


id: PR:P0C8R3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi5 gene.","definition_xrefs":["UniProtKB:P0C8R3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-40S ribosomal protein S27b (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.10c","synonyms":[{"name":"Spom972h-ubi5","type":"exact"}],"termid":"PR:P0C8R3"}


id: PR:O74736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- png2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein png2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.11c","synonyms":[{"name":"ING1 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-png2","type":"exact"}],"termid":"PR:O74736"}


id: PBO:0078159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 37 (pseudogene)","termid":"PBO:0078159"}


id: MONDO:0021099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process characterized by the presence of multiple intraductal papillomas.","definition_xrefs":["NCIT:C7363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillomatosis","termid":"MONDO:0021098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal papillomatosis","secondary_identifiers":["UMLS:C0334377","ICDO:8505/0","MEDGEN:90774"],"synonyms":[{"name":"duct papillomatosis","type":"exact"},{"name":"intraductal papillomatosis","type":"exact"}],"termid":"MONDO:0021099","xrefs":{"Monarch":{"xref_id":"0021099"}}}


id: MOD:00423
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one sodium atom for one hydrogen atom.","definition_xrefs":["Unimod:30","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium containing modified residue","termid":"MOD:00747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium salt","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"Na1Res","type":"exact"},{"name":"Sodium","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:00423"}


id: GO:0043900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a multi-organism process, a process in which an organism has an effect on another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of multi-organism process (obsolete GO:0043900)","termid":"GO:0043900"}


id: PBO:0004423
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ace2 target genes","termid":"PBO:0004423"}


id: MOD:01704
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to dehydrobutyrine, by neutral loss of methyl sulfide.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"dehydrobutyrine","termid":"MOD:01703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrobutyrine (Met)","synonyms":[{"name":"dHAbu(Met)","type":"exact"}],"termid":"MOD:01704"}


id: MONDO:0018862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cat-scratch disease (obsolete MONDO:0018862)","termid":"MONDO:0018862","xrefs":{"Monarch":{"xref_id":"0018862"}}}


id: PBO:0040867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bMERB domain containing 1","termid":"PBO:0040867"}


id: GO:0019131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal tripeptide from a polypeptide; requires acid pH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tripeptidyl-peptidase I activity (obsolete GO:0019131)","synonyms":[{"name":"tripeptidyl aminopeptidase activity","type":"broad"},{"name":"tripeptidyl peptidase activity","type":"broad"},{"name":"tripeptidyl-peptidase I activity","type":"exact"}],"termid":"GO:0019131"}


id: GO:1902231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","PMID:15314165","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902229"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001244"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"activation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"activation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"narrow"},{"name":"positive regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"up regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"}],"termid":"GO:1902231"}


id: GO:0009951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the establishment of polarity along the dorsal/ventral axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"dorsal/ventral axis specification","termid":"GO:0009950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polarity specification of dorsal/ventral axis","synonyms":[{"name":"polarity specification of dorsal-ventral axis","type":"exact"},{"name":"polarity specification of dorsoventral axis","type":"exact"}],"termid":"GO:0009951"}


id: PBO:0043203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase, mitochondrial 1A","termid":"PBO:0043203"}


id: FYPO:0007182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule depolymerization, i.e. the removal of tubulin dimers from a cytoplasmic microtubule, occurs to a lesser extent than normal at the plus end of the microtubule at the cell tip. Normally, rapid depolymerization takes place when the growing plus end of the microtubule reaches the cell tip.","definition_xrefs":["PMID:31276301","GO:0070462","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell tip","synonyms":[{"name":"decreased cytoplasmic microtubule depolymerisation at plus end at cell tip","type":"exact"},{"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell end","type":"exact"},{"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell tip during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell tip during vegetative growth","type":"exact"},{"name":"decreased microtubule catastrophe at cell tip","type":"related"},{"name":"decreased microtubule plus end shrinkage at cell tip","type":"related"},{"name":"decreased plus-end specific microtubule depolymerization at cell tip","type":"exact"},{"name":"reduced cytoplasmic microtubule depolymerization at plus end at cell tip","type":"exact"}],"termid":"FYPO:0007182"}


id: MONDO:0007752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperheparinemia","secondary_identifiers":["UMLS:C3203346","OMIM:144050","MESH:C562723","ICD9:286.5","MEDGEN:469019","SCTID:79674009"],"synonyms":[{"name":"hyperheparinemia","type":"exact"}],"termid":"MONDO:0007752","xrefs":{"Monarch":{"xref_id":"0007752"}}}


id: PR:Q10322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase dma1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"E3 ubiquitin-protein ligase dma1","termid":"PR:000027845"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase dma1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.10c","secondary_identifiers":["UniProtKB:Q10322"],"synonyms":[{"name":"Spom972h-dma1","type":"exact"}],"termid":"PR:Q10322"}


id: MONDO:0800298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0005066","MONDO:0019053","MONDO:0006025"],"is_obsolete":false,"name":"peroxisome biogenesis disorder, complementation group 2","secondary_identifiers":["UMLS:C3550274","MEDGEN:763188"],"synonyms":[{"name":"CG2","type":"exact"}],"termid":"MONDO:0800298","xrefs":{"Monarch":{"xref_id":"0800298"}}}


id: PBO:0048752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 3","termid":"PBO:0048752"}


id: MONDO:0000608
data:
  {"annotated_genes":["SJAG_02208","SJAG_02330"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87960,87959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014891"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02208":null,"SJAG_02330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"familial juvenile hyperuricemic nephropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:162000","NANDO:2200139","DOID:0060062","SCTID:46785007","MEDGEN:75651","UMLS:C0268113","NANDO:2100014","MESH:C537696"],"synonyms":[{"name":"FJHN","type":"exact"},{"name":"familial juvenile gouty nephropathy","type":"exact"},{"name":"familial juvenile hyperuricemic nephropathy","type":"exact"},{"name":"familial nephropathy associated with hyperuricemia","type":"exact"},{"name":"familial nephropathy with gout","type":"exact"},{"name":"gouty nephropathy, familial","type":"related"},{"name":"gouty nephropathy, familial juvenile","type":"exact"},{"name":"juvenile gout","type":"exact"},{"name":"juvenile gouty nephropathy","type":"exact"},{"name":"nephropathy, familial, with gout","type":"exact"},{"name":"tubulointerstitial kidney disease","type":"exact"}],"termid":"MONDO:0000608","terms_by_termid":{"MONDO:0014891":null},"xrefs":{"Monarch":{"xref_id":"0000608"}}}


id: PBO:0039967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 10","termid":"PBO:0039967"}


id: GO:1904744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomeric DNA binding.","definition_xrefs":["GOC:BHF","GO_REF:0000059","GOC:BHF_telomere","GOC:TermGenie","GOC:nc","PMID:24415760"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomeric DNA binding (obsolete GO:1904744)","synonyms":[{"name":"activation of telomere binding","type":"narrow"},{"name":"activation of telomeric DNA binding","type":"narrow"},{"name":"activation of telomeric repeat binding","type":"narrow"},{"name":"positive regulation of telomere binding","type":"exact"},{"name":"positive regulation of telomeric repeat binding","type":"exact"},{"name":"up regulation of telomere binding","type":"exact"},{"name":"up regulation of telomeric DNA binding","type":"exact"},{"name":"up regulation of telomeric repeat binding","type":"exact"},{"name":"up-regulation of telomere binding","type":"exact"},{"name":"up-regulation of telomeric DNA binding","type":"exact"},{"name":"up-regulation of telomeric repeat binding","type":"exact"},{"name":"upregulation of telomere binding","type":"exact"},{"name":"upregulation of telomeric DNA binding","type":"exact"},{"name":"upregulation of telomeric repeat binding","type":"exact"}],"termid":"GO:1904744"}


id: GO:0018188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-proline to form trans-2,3-cis-3,4-dihydroxy-L-proline.","definition_xrefs":["RESID:AA0282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline hydroxylation","termid":"GO:0019511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline di-hydroxylation","termid":"GO:0018188"}


id: PBO:0109639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1F (pseudogene)","termid":"PBO:0109639"}


id: FYPO:0005304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through interphase of the mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of mitotic interphase","synonyms":[{"name":"decreased rate of mitotic interphase progression","type":"related"},{"name":"delayed mitotic interphase progression","type":"related"},{"name":"delayed mitotic interphase progression during vegetative growth","type":"related"},{"name":"increased duration of interphase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic interphase during vegetative growth","type":"exact"},{"name":"prolonged mitotic interphase","type":"exact"},{"name":"reduced rate of mitotic interphase progression","type":"related"}],"termid":"FYPO:0005304"}


id: PBO:0044949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 5","termid":"PBO:0044949"}


id: MONDO:0012682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary predisposition to infections in which the cause of the disease is a mutation in the TYK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 35","secondary_identifiers":["GARD:17514","DOID:0111989","Orphanet:331226","UMLS:C1969086","MEDGEN:409751","OMIM:611521","MESH:C566928"],"synonyms":[{"name":"HIES with atypical Mycobacteriosis, autosomal recessive","type":"exact"},{"name":"IMD35","type":"exact"},{"name":"TYK2 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"TYK2 deficiency","type":"exact"},{"name":"autosomal recessive hyper-IgE syndrome due to TYK2 deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in TYK2","type":"exact"},{"name":"hyper-IgE syndrome with atypical Mycobacteriosis, autosomal recessive","type":"exact"},{"name":"immunodeficiency 35","type":"exact"},{"name":"immunodeficiency type 35","type":"exact"},{"name":"susceptibility to infection due to TYK2 deficiency","type":"exact"},{"name":"tyrosine kinase 2 deficiency","type":"exact"}],"termid":"MONDO:0012682","xrefs":{"Monarch":{"xref_id":"0012682"}}}


id: PBO:0043481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canopy FGF signaling regulator 3","termid":"PBO:0043481"}


id: GO:0018541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-benzoquinone + H+ + NADPH = hydroquinone + NADP+.","definition_xrefs":["RHEA:23488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"p-benzoquinone reductase (NADPH) activity","secondary_identifiers":["KEGG_REACTION:R05244","MetaCyc:1.6.5.6-RXN","EC:1.6.5.6"],"synonyms":[{"name":"NADPH:p-benzoquinone oxidoreductase activity","type":"related"}],"termid":"GO:0018541"}


id: GO:0006518
data:
  {"annotated_genes":["SJAG_00469","SJAG_00792","SJAG_01004","SJAG_01430","SJAG_00181","SJAG_02599","SJAG_04031","SJAG_00988","SJAG_01088","SJAG_01351","SJAG_03494","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71595],"is_not":false,"summary":null,"term":"GO:0006518"},{"annotations":[59555,95976,107335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[110392,79232,57871,80555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[95922],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[79427,74419,116449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043171"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01004":null,"SJAG_01088":null,"SJAG_01351":null,"SJAG_01430":null,"SJAG_02599":null,"SJAG_03494":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-2980736"],"synonyms":[{"name":"peptide metabolism","type":"exact"}],"termid":"GO:0006518","terms_by_termid":{"GO:0006518":null,"GO:0006750":null,"GO:0031169":null,"GO:0043171":null,"GO:1905569":null}}


id: PBO:0043485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cannabinoid receptor interacting protein 1","termid":"PBO:0043485"}


id: GO:1905447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial ATP synthesis coupled electron transport.","definition_xrefs":["GOC:bc","GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:23707074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidative phosphorylation","termid":"GO:0090324"},{"relation_name":"is_a","term_name":"regulation of mitochondrial ATP synthesis coupled electron transport","termid":"GO:1905446"},{"relation_name":"negatively_regulates","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial ATP synthesis coupled electron transport","synonyms":[{"name":"down regulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"down-regulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"downregulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"inhibition of mitochondrial ATP synthesis coupled electron transport","type":"narrow"}],"termid":"GO:1905447"}


id: MONDO:0022071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carbon baby syndrome, also known as universal acquired melanosis, is a rare form of hyperpigmentation. The skin of affected infants progressively darkens over the first years of life in the absence of other symptoms. The cause of the condition is unknown.","definition_xrefs":["GARD:0001089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon baby syndrome","secondary_identifiers":["SCTID:238700008","UMLS:C0406419","MEDGEN:98349"],"synonyms":[{"name":"universal acquired melanosis","type":"related"}],"termid":"MONDO:0022071","xrefs":{"Monarch":{"xref_id":"0022071"}}}


id: PBO:0072627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-spondin 2","termid":"PBO:0072627"}


id: PBO:0077381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 121B","termid":"PBO:0077381"}


id: SO:0000978
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a guide_RNA that specifies the insertions and deletions of bases in the editing of a target mRNA.","definition_xrefs":["SO:jk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guide_RNA_region","termid":"SO:0000930"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"template_region","synonyms":[{"name":"information region","type":"exact"},{"name":"template region","type":"exact"}],"termid":"SO:0000978"}


id: GO:0051105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA ligation, the re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA ligation (obsolete GO:0051105)","termid":"GO:0051105"}


id: PBO:0002771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II, and III subunit Rpb10","termid":"PBO:0002771"}


id: MONDO:0003220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the gall bladder","direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder cancer","termid":"MONDO:0005411"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder carcinoma","secondary_identifiers":["DOID:4948","UMLS:C0235782","EFO:1001956","MEDGEN:116001","NCIT:C3844","SCTID:372140005"],"synonyms":[{"name":"Gall bladder carcinoma (adeno)","type":"exact"},{"name":"Gall bladder carcinoma (adenocarcinoma)","type":"exact"},{"name":"cancer of gallbladder","type":"exact"},{"name":"cancer of the gallbladder","type":"exact"},{"name":"carcinoma gallbladder","type":"exact"},{"name":"carcinoma of gall bladder","type":"exact"},{"name":"carcinoma of gallbladder","type":"exact"},{"name":"carcinoma of the gallbladder","type":"exact"},{"name":"gall bladder carcinoma","type":"exact"},{"name":"gallbladder cancer","type":"broad"},{"name":"gallbladder carcinoma","type":"exact"}],"termid":"MONDO:0003220","xrefs":{"Monarch":{"xref_id":"0003220"}}}


id: PBO:0012014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, coatamer related complex subunit Sea3 (predicted)","termid":"PBO:0012014"}


id: PBO:0087126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein; has similarity to mammalian heterogeneous nuclear RNP K protein, involved in the regulation of telomere position effect and telomere length; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087126"}


id: MONDO:0010350
data:
  {"annotated_genes":["SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88840],"is_not":false,"summary":null,"term":"MONDO:0010350"}]},"cv_name":"mondo","definition":"Any primary ovarian failure in which the cause of the disease is a mutation in the DIAPH2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 2A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:336902","MESH:C564498","OMIM:300511","UMLS:C1845293","DOID:0080858"],"synonyms":[{"name":"DIAPH2 primary ovarian failure","type":"exact"},{"name":"POF2A","type":"related"},{"name":"premature ovarian failure 2A","type":"exact"},{"name":"premature ovarian failure 2A, X-linked dominant","type":"exact"},{"name":"premature ovarian failure type 2A","type":"exact"},{"name":"primary ovarian failure caused by mutation in DIAPH2","type":"exact"}],"termid":"MONDO:0010350","terms_by_termid":{"MONDO:0010350":null},"xrefs":{"Monarch":{"xref_id":"0010350"}}}


id: PATO:0001824
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wetness quality inhering in a bearer by virtue of the bearer's not being covered by a liquid.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wetness","termid":"PATO:0001822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dry","termid":"PATO:0001824"}


id: GO:0060779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secondary leaflet attains its shape. A secondary leaflet develops by branching or division of a primary leaflet.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary leaflet morphogenesis","termid":"GO:0060779"}


id: PBO:0047547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 6","termid":"PBO:0047547"}


id: FYPO:0001697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a topoisomerase inhibitor. Cells stop growing (and may die) at a concentration of a topoisomerase inhibitor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to topoisomerase inhibitor","synonyms":[{"name":"hypersensitive to topoisomerase inhibitor","type":"exact"},{"name":"sensitive to topoisomerase inhibitor during mitotic cell cycle","type":"related"},{"name":"sensitive to topoisomerase inhibitor during vegetative growth","type":"exact"}],"termid":"FYPO:0001697"}


id: PBO:0031015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_vanadate","termid":"PBO:0031015"}


id: PBO:0063185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX homeobox interacting protein 1","termid":"PBO:0063185"}


id: PBO:0091686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAP2/UBAP2L","termid":"PBO:0091686"}


id: MONDO:0019051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal disease (obsolete MONDO:0019051)","termid":"MONDO:0019051","xrefs":{"Monarch":{"xref_id":"0019051"}}}


id: PBO:0063198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 29","termid":"PBO:0063198"}


id: PBO:0091388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome assembly protein Rrg9","termid":"PBO:0091388"}


id: PBO:0074898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 72","termid":"PBO:0074898"}


id: FYPO:0007056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of substances via vesicles from the Golgi to other parts of the cell is abnormal..","definition_xrefs":["GO:0006892","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal post-Golgi vesicle-mediated transport","synonyms":[{"name":"abnormal exit from TGN","type":"exact"},{"name":"abnormal post-Golgi transport","type":"exact"},{"name":"abnormal post-Golgi vesicle-mediated transport during mitotic cell cycle","type":"related"},{"name":"abnormal post-Golgi vesicle-mediated transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007056"}


id: GO:1901761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving oxytetracycline.","definition_xrefs":["PMID:8163168","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"oxytetracycline metabolic process","synonyms":[{"name":"oxytetracycline metabolism","type":"exact"}],"termid":"GO:1901761"}


id: GO:0097167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA translation with a regularity of approximately 24 hours.","definition_xrefs":["PMID:17264215","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"circadian regulation of translation","synonyms":[{"name":"regulation of mRNA translation in response to circadian clock","type":"exact"}],"termid":"GO:0097167"}


id: GO:2000672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of motor neuron apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"regulation of motor neuron apoptotic process","termid":"GO:2000671"},{"relation_name":"negatively_regulates","term_name":"motor neuron apoptotic process","termid":"GO:0097049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of motor neuron apoptotic process","synonyms":[{"name":"negative regulation of motoneuron apoptosis","type":"exact"},{"name":"negative regulation of motor neuron apoptosis","type":"narrow"}],"termid":"GO:2000672"}


id: PBO:0064784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1E","termid":"PBO:0064784"}


id: GO:0046116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete queuosine metabolic process (obsolete GO:0046116)","synonyms":[{"name":"queuosine metabolism","type":"exact"}],"termid":"GO:0046116"}


id: PBO:0113742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 5","termid":"PBO:0113742"}


id: PBO:0113476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIb of cytochrome c oxidase; cytochrome c oxidase is also known as respiratory Complex IV and is the terminal member of the mitochondrial inner membrane electron transport chain; required for assembly and activity of cytochrome c oxidase; phosphorylated; easily released from the intermembrane space, suggesting a loose association with Complex IV","termid":"PBO:0113476"}


id: PBO:0042350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD84 molecule","termid":"PBO:0042350"}


id: PBO:0028624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribonucleoprotein_complex_assembly","termid":"PBO:0028624"}


id: GO:0006075
data:
  {"annotated_genes":["SJAG_01290","SJAG_00218","SJAG_00876","SJAG_02222","SJAG_01255","SJAG_04666","SJAG_01787","SJAG_04483","SJAG_04771","SJAG_04668","SJAG_01288","SJAG_03705","SJAG_04462","SJAG_04659","SJAG_01835","SJAG_00610","SJAG_05285","SJAG_03587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[76296,77649,74777,117822,72820,93454,115153,108050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[94281,89341],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[107284,69407,94265,107859,120054,92617,119921],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan metabolic process","termid":"GO:0006074"},{"relation_name":"is_a","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"1,3-beta-D-glucan biosynthetic process","type":"exact"},{"name":"1,3-beta-glucan anabolism","type":"exact"},{"name":"1,3-beta-glucan biosynthesis","type":"exact"},{"name":"1,3-beta-glucan formation","type":"exact"},{"name":"1,3-beta-glucan synthesis","type":"exact"},{"name":"beta-1,3 glucan anabolism","type":"exact"},{"name":"beta-1,3 glucan biosynthesis","type":"exact"},{"name":"beta-1,3 glucan biosynthetic process","type":"exact"},{"name":"beta-1,3 glucan formation","type":"exact"},{"name":"beta-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0006075","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: MONDO:0002737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute transudative otitis media which involves bloody effusion.","definition_xrefs":["DOID:3696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute transudative otitis media","termid":"MONDO:0002738"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute sanguinous otitis media","secondary_identifiers":["MEDGEN:583100","ICD9:381.03","SCTID:77478005","UMLS:C0395865"],"termid":"MONDO:0002737","xrefs":{"Monarch":{"xref_id":"0002737"}}}


id: MONDO:0035349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized form of dystrophic epidermolysis bullosa characterized by blisters confined primarily to the hands and feet (acral form) or to the pretibial region (pretibial form). Nail dystrophy or loss is common and may be an isolated finding (nail only form). This disease can be inherited via autosomal dominant or autosomal recessive inheritance.","definition_xrefs":["Orphanet:595356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"localized dystrophic epidermolysis bullosa","secondary_identifiers":["GARD:22388","MEDGEN:634276","UMLS:C0474885"],"synonyms":[{"name":"localised DEB","type":"exact"},{"name":"localized DEB","type":"exact"}],"termid":"MONDO:0035349","xrefs":{"Monarch":{"xref_id":"0035349"}}}


id: GO:0008534
data:
  {"annotated_genes":["SJAG_03724","SJAG_01119","SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75337,76072,98032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme-substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site.","definition_xrefs":["PMID:11554296","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized base lesion DNA N-glycosylase activity","termid":"GO:0000702"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"oxidized purine nucleobase lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0003907","Reactome:R-HSA-110229","EC:3.2.2.23","MetaCyc:3.2.2.23-RXN","Reactome:R-HSA-110243","Reactome:R-HSA-110244"],"synonyms":[{"name":"2,6-diamino-4-hydroxy-5(N-methyl)formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"2,6-diamino-4-hydroxy-5N-formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"8-oxoguanine DNA glycosylase activity","type":"broad"},{"name":"DNA glycohydrolase [2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimide releasing]","type":"related"},{"name":"DNA glycosylase/AP-lyase activity","type":"broad"},{"name":"DNA glycosylase/beta-lyase activity","type":"broad"},{"name":"DNA-formamidopyrimidine glycosylase activity","type":"related"},{"name":"Fapy-DNA glycosylase activity","type":"related"},{"name":"Fpg protein","type":"related"},{"name":"bifunctional DNA glycosylase activity","type":"broad"},{"name":"deoxyribonucleate glycosidase activity","type":"related"},{"name":"formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"oxidized purine base lesion DNA N-glycosylase activity","type":"exact"},{"name":"purine-specific oxidized base lesion DNA N-glycosylase activity","type":"related"}],"termid":"GO:0008534","terms_by_termid":{"GO:0034039":null}}


id: PBO:0034267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_latent_homology_relationship_with","termid":"PBO:0034267"}


id: PBO:0051158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-38 (non-functional)","termid":"PBO:0051158"}


id: GO:0017057
data:
  {"annotated_genes":["SJAG_01824"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74833],"is_not":false,"summary":null,"term":"GO:0017057"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-O-phosphono-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate + H+.","definition_xrefs":["EC:3.1.1.31","RHEA:12556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"6-phosphogluconolactonase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02035","MetaCyc:6PGLUCONOLACT-RXN","Reactome:R-HSA-71296"],"synonyms":[{"name":"6-PGL","type":"related"},{"name":"6-phospho-D-glucono-1,5-lactone lactonohydrolase activity","type":"related"},{"name":"phosphogluconolactonase activity","type":"related"}],"termid":"GO:0017057","terms_by_termid":{"GO:0017057":null}}


id: FYPO:0001404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A colony morphology phenotype in which the outline of a colony growing on a solid surface is not symmetrical.","definition_xrefs":["PomBase:mah","PomBase:mp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal colony morphology","termid":"FYPO:0000150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"irregular colony morphology","synonyms":[{"name":"wavy-edged colony","type":"related"}],"termid":"FYPO:0001404"}


id: PBO:0002182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUR7 family protein (predicted)","termid":"PBO:0002182"}


id: MONDO:0021109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endophytic lesion in the urinary tract which shares several morphologic features with urothelial papilloma. This lesion may recur after complete excision. Transitional cell carcinomas may arise within inverted urothelial papillomas.","definition_xrefs":["NCIT:C6192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted transitional cell papilloma","termid":"MONDO:0003064"},{"relation_name":"is_a","term_name":"urothelial papilloma","termid":"MONDO:0004041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted urothelial papilloma","secondary_identifiers":["UMLS:C1334282","MEDGEN:233583","ONCOTREE:IUP"],"synonyms":[{"name":"IUP","type":"related"},{"name":"inverted papilloma of urinary tract","type":"exact"},{"name":"inverted urothelial papilloma","type":"exact"},{"name":"urinary tract inverted papilloma","type":"exact"},{"name":"urothelium inverted papilloma","type":"exact"}],"termid":"MONDO:0021109","xrefs":{"Monarch":{"xref_id":"0021109"}}}


id: GO:2000685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to X-ray.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to X-ray","termid":"GO:2000683"},{"relation_name":"positively_regulates","term_name":"cellular response to X-ray","termid":"GO:0071481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to X-ray","synonyms":[{"name":"positive regulation of cellular response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:2000685"}


id: GO:0046068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyclic GMP, guanosine 3',5'-phosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"cyclic purine nucleotide metabolic process","termid":"GO:0052652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cGMP metabolic process","synonyms":[{"name":"cGMP metabolism","type":"exact"}],"termid":"GO:0046068"}


id: GO:0008233
data:
  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id: MONDO:1011867
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal abiotrophy, non-human animal","secondary_identifiers":["OMIA:001164"],"termid":"MONDO:1011867","xrefs":{"Monarch":{"xref_id":"1011867"}}}


id: PBO:0027350
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id: FYPO:0001816
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoribosylamine-glycine ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal phosphoribosylamine-glycine ligase activity","synonyms":[{"name":"abnormal GAR synthetase activity","type":"exact"}],"termid":"FYPO:0001816"}


id: GO:1902072
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id: GO:0008990
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id: MONDO:0958188
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id: PBO:0042522
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 2","termid":"PBO:0042522"}


id: PBO:0076978
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylguanosine synthase 1","termid":"PBO:0076978"}


id: MONDO:0014176
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id: FYPO:0003895
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of rotenone than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to rotenone","synonyms":[{"name":"resistance to rotenone during mitotic cell cycle","type":"related"},{"name":"resistance to rotenone during vegetative growth","type":"exact"},{"name":"resistant to rotenone","type":"exact"}],"termid":"FYPO:0003895"}


id: GO:0001856
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id: PBO:0058882
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10398","termid":"PBO:0058882"}


id: MONDO:0018337
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete severe neonatal lactic acidosis due to NFS1-ISD11 complex deficiency (obsolete MONDO:0018337)","termid":"MONDO:0018337","xrefs":{"Monarch":{"xref_id":"0018337"}}}


id: PBO:0027895
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methyltransferase_activity_(H3-K4_specific)","termid":"PBO:0027895"}


id: GO:0097588
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility due to movement of bacterial- or archaeal-type flagella.","definition_xrefs":["GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium or flagellum-dependent cell motility","termid":"GO:0001539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"archaeal or bacterial-type flagellum-dependent cell motility","termid":"GO:0097588"}


id: PBO:0117393
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive intermediate imine deaminase A","termid":"PBO:0117393"}


id: GO:0106036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly or arrangement of constituent parts apicomedial cortex actomyosin.","definition_xrefs":["PMID:28263180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical actin cytoskeleton organization","termid":"GO:0030866"},{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"assembly of apicomedial cortex actomyosin","termid":"GO:0106036"}


id: PBO:0073735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 3","termid":"PBO:0073735"}


id: GO:0008024
data:
  {"annotated_genes":["SJAG_02057","SJAG_03061","SJAG_01149","SJAG_01213","SJAG_03967"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97680,112890,81289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[110841,110998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"}]},"cv_name":"cellular_component","definition":"A transcription elongation factor complex that facilitates the transition from abortive to productive elongation by phosphorylating the CTD domain of the large subunit of DNA-directed RNA polymerase II, holoenzyme. Contains a cyclin and a cyclin-dependent protein kinase catalytic subunit.","definition_xrefs":["PMID:16721054","PMID:7759473","PMID:19328067","GOC:bhm","PMID:10766736","PMID:17079683","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"},{"relation_name":"is_a","term_name":"nuclear cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0019908"},{"relation_name":"is_a","term_name":"carboxy-terminal domain protein kinase complex","termid":"GO:0032806"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_03061":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"cyclin/CDK positive transcription elongation factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive transcription elongation factor complex b","type":"related"}],"termid":"GO:0008024","terms_by_termid":{"GO:0070691":null,"GO:0070692":null}}


id: PBO:0074691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70","termid":"PBO:0074691"}


id: PBO:0071747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 3","termid":"PBO:0071747"}


id: GO:0070297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction via a phosphorelay signal transduction system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of phosphorelay signal transduction system","synonyms":[{"name":"regulation of histidyl-aspartyl phosphorelay","type":"exact"},{"name":"regulation of two-component signal transduction system","type":"exact"},{"name":"regulation of two-component signal transduction system (phosphorelay)","type":"narrow"}],"termid":"GO:0070297"}


id: PBO:0002838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4A (predicted)","termid":"PBO:0002838"}


id: GO:1900700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of o-orsellinic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of o-orsellinic acid biosynthetic process","termid":"GO:1900698"},{"relation_name":"positively_regulates","term_name":"o-orsellinic acid biosynthetic process","termid":"GO:1900584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of o-orsellinic acid biosynthetic process","synonyms":[{"name":"activation of o-orsellinic acid anabolism","type":"exact"},{"name":"activation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"activation of o-orsellinic acid biosynthetic process","type":"narrow"},{"name":"activation of o-orsellinic acid formation","type":"exact"},{"name":"activation of o-orsellinic acid synthesis","type":"exact"},{"name":"positive regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"positive regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"positive regulation of o-orsellinic acid formation","type":"exact"},{"name":"positive regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"up regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"up regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"up regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"up regulation of o-orsellinic acid formation","type":"exact"},{"name":"up regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"up-regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"up-regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"up-regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"up-regulation of o-orsellinic acid formation","type":"exact"},{"name":"up-regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"upregulation of o-orsellinic acid anabolism","type":"exact"},{"name":"upregulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"upregulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"upregulation of o-orsellinic acid formation","type":"exact"},{"name":"upregulation of o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900700"}


id: PBO:0058049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4270","termid":"PBO:0058049"}


id: MONDO:0007746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthostatic hypotensive disorder, Streeten type","secondary_identifiers":["MEDGEN:327101","MESH:C564174","OMIM:143850","UMLS:C1840438"],"synonyms":[{"name":"OHDS","type":"related"},{"name":"hyperbradykininism","type":"related"},{"name":"orthostatic hypotensive disorder","type":"related"},{"name":"orthostatic hypotensive disorder of Streeten","type":"exact"},{"name":"orthostatic hypotensive disorder, Streeten type","type":"exact"}],"termid":"MONDO:0007746","xrefs":{"Monarch":{"xref_id":"0007746"}}}


id: PBO:0050811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUS1 checkpoint clamp component B","termid":"PBO:0050811"}


id: PBO:0018201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-X homolog, FANCM-MHF complex subunit Mhf2","termid":"PBO:0018201"}


id: PBO:0060946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFIA antisense RNA 2","termid":"PBO:0060946"}


id: PBO:0068035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 340","termid":"PBO:0068035"}


id: PBO:0066973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 276","termid":"PBO:0066973"}


id: FYPO:0007636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 9 of histone H3 in one or more promoter regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at promoter during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at promoter during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation at promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0007636"}


id: PBO:0002466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin","termid":"PBO:0002466"}


id: PBO:0068954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 198, pseudogene","termid":"PBO:0068954"}


id: MONDO:0016265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endometrial stromal sarcoma (obsolete MONDO:0016265)","termid":"MONDO:0016265","xrefs":{"Monarch":{"xref_id":"0016265"}}}


id: PBO:0086013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0086013"}


id: GO:0031259
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a uropod.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"cell trailing edge membrane","termid":"GO:0031257"},{"relation_name":"part_of","term_name":"uropod","termid":"GO:0001931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"uropod membrane","synonyms":[{"name":"uropodium membrane","type":"exact"}],"termid":"GO:0031259"}


id: GO:0033902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 28S rRNA containing guanosine-adenosine pair + H2O = an [RNA fragment]-3'-adenosine-3'-phosphate + a 5'-a hydroxy-guanosine-3'-[RNA fragment].","definition_xrefs":["EC:4.6.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"rRNA endonuclease activity","secondary_identifiers":["MetaCyc:3.1.27.10-RXN"],"synonyms":[{"name":"alpha-sarcin","type":"related"}],"termid":"GO:0033902"}


id: GO:1900205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in metanephric nephron tubule development.","definition_xrefs":["PMID:17314325","GOC:TermGenie","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in metanephric nephron tubule development","synonyms":[{"name":"apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"type I programmed cell death of metanephric nephron tubule development","type":"narrow"}],"termid":"GO:1900205"}


id: GO:0006510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP-dependent proteolysis (obsolete GO:0006510)","synonyms":[{"name":"ATP-dependent peptidolysis","type":"exact"},{"name":"ATP-dependent proteolysis","type":"exact"}],"termid":"GO:0006510"}


id: PBO:0080466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle trafficking 1 pseudogene 2","termid":"PBO:0080466"}


id: PBO:0065467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 8 pseudogene 1","termid":"PBO:0065467"}


id: MONDO:0022754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cytogenetic abnormality that refers to the allelic loss of all or part of the short arm of chromosome 17.","definition_xrefs":["NCIT:C36499"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Smith-Magenis syndrome","termid":"MONDO:0008434"},{"relation_name":"is_a","term_name":"partial deletion of chromosome 17","termid":"MONDO:0016879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17p deletion","secondary_identifiers":["Orphanet:261965","icd11.foundation:527787991","MEDGEN:1842221","GARD:20817","MESH:C538045","UMLS:C5679671"],"synonyms":[{"name":"17p deletion","type":"related"},{"name":"17p monosomy","type":"related"},{"name":"17p- syndrome","type":"related"},{"name":"chromosome 17p deletion","type":"exact"},{"name":"chromosome 17p deletion syndrome","type":"related"},{"name":"del(17p)","type":"related"},{"name":"deletion 17p","type":"related"},{"name":"deletion 17p syndrome","type":"related"},{"name":"interstitial deletion 17p","type":"related"},{"name":"loss of chromosome 17p","type":"related"},{"name":"monosomy 17p","type":"related"},{"name":"partial deletion of chromosome 17p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 17","type":"exact"},{"name":"partial monosomy 17p","type":"related"},{"name":"partial monosomy of chromosome 17p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 17","type":"exact"},{"name":"partial monosomy of the short arm of chromosome type 17","type":"exact"}],"termid":"MONDO:0022754","xrefs":{"Monarch":{"xref_id":"0022754"}}}


id: MONDO:0006865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infectious process affecting the gums. It is characterized by the development of necrotic, ulcerated, and painful lesions with creation of pseudomembranes extending along the gingival margins.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingivitis","termid":"MONDO:0002508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotizing ulcerative gingivitis","secondary_identifiers":["MESH:D005892","SCTID:186963008","ICD9:101","MEDGEN:42219","UMLS:C0017575","NCIT:C34637","EFO:1001058","DOID:13924"],"synonyms":[{"name":"ANUG","type":"exact"},{"name":"Fusospirillary gingivitis","type":"related"},{"name":"Fusospirillosis","type":"related"},{"name":"Vincent angina","type":"exact"},{"name":"Vincent's angina","type":"exact"},{"name":"Vincent's angina - pharyngitis","type":"exact"},{"name":"Vincent's disease","type":"exact"},{"name":"Vincent's gingivitis","type":"related"},{"name":"Vincent's infection","type":"related"},{"name":"Vincent's infection, any site","type":"exact"},{"name":"Vincent's stomatitis","type":"related"},{"name":"acute membranous gingivitis","type":"related"},{"name":"acute necrotising ulcerative gingivitis","type":"exact"},{"name":"acute necrotising ulcerative gingivitis [ambiguous]","type":"exact"},{"name":"acute necrotising ulcerative gingivostomatitis","type":"exact"},{"name":"acute necrotising ulcerative gingivostomatitis [ambiguous]","type":"exact"},{"name":"acute necrotizing ulcerative gingivitis","type":"exact"},{"name":"acute necrotizing ulcerative gingivostomatitis","type":"exact"},{"name":"acute ulceromembranous gingivitis","type":"exact"},{"name":"angina - Vincents","type":"exact"},{"name":"early acute necrotising gingivitis","type":"exact"},{"name":"phagedenic gingivitis","type":"related"},{"name":"trench mouth","type":"exact"}],"termid":"MONDO:0006865","xrefs":{"Monarch":{"xref_id":"0006865"}}}


id: PBO:0083744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the outer kinetochore MIND complex; joins kinetochore subunits contacting DNA to those contacting microtubules; required for kinetochore bi-orientation and accurate chromosome segregation; complex consists of Mtw1p, Nnf1p, Nsl1p and Dsn1p; homologous to metazoan CENP-H proteins","termid":"PBO:0083744"}


id: PR:O59792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cif1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin-independence factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.01","synonyms":[{"name":"Spom972h-cif1","type":"exact"}],"termid":"PR:O59792"}


id: PBO:0051646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 1","termid":"PBO:0051646"}


id: GO:2000539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein geranylgeranylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein geranylgeranylation","termid":"GO:0018344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein geranylgeranylation","synonyms":[{"name":"regulation of C-terminal protein geranylgeranylation","type":"related"},{"name":"regulation of protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:2000539"}


id: GO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resumption of the mitotic cell division cycle by cells that were in a quiescent or other non-dividing state.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"re-entry into mitotic cell cycle","termid":"GO:0000320"}


id: MONDO:0014811
data:
  {"annotated_genes":["SJAG_02437"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87648],"is_not":false,"summary":null,"term":"MONDO:0014811"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder with motor features","termid":"MONDO:0100516"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02437":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"cerebellar atrophy, visual impairment, and psychomotor retardation;","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225172","OMIM:616875","DOID:0081276","MEDGEN:905041"],"synonyms":[{"name":"CAVIPMR","type":"related"},{"name":"cerebellar atrophy, visual impairment, and psychomotor retardation","type":"related"}],"termid":"MONDO:0014811","terms_by_termid":{"MONDO:0014811":null},"xrefs":{"Monarch":{"xref_id":"0014811"}}}


id: PBO:0090478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Enp2","termid":"PBO:0090478"}


id: PBO:0085206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer mitochondrial membrane GTPase, subunit of the ERMES complex; potential regulatory subunit of the ERMES complex that links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; cells lacking Gem1p contain collapsed, globular, or grape-like mitochondria; ortholog of metazoan Miro GTPases","termid":"PBO:0085206"}


id: PBO:0042582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion associated, oncogene regulated","termid":"PBO:0042582"}


id: MONDO:0013705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 19","secondary_identifiers":["UMLS:C3280541","GARD:22558","MEDGEN:482171","OMIM:614343"],"synonyms":[{"name":"MRT19","type":"exact"},{"name":"intellectual disability, autosomal recessive 19","type":"exact"},{"name":"mental retardation, autosomal recessive 19","type":"related"}],"termid":"MONDO:0013705","xrefs":{"Monarch":{"xref_id":"0013705"}}}


id: PR:O94267
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A FACT complex subunit SPT16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03804","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit spt16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.19","secondary_identifiers":["UniProtKB:O94267"],"synonyms":[{"name":"Spom972h-SUPT16H","type":"exact"},{"name":"facilitates chromatin transcription complex subunit spt16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94267"}


id: PR:O94537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ire1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.01","synonyms":[{"name":"Spom972h-ire1","type":"exact"}],"termid":"PR:O94537"}


id: PBO:0089529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA wobble uridine modification GTPase Mss1","termid":"PBO:0089529"}


id: GO:0010760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of macrophage chemotaxis. Macrophage chemotaxis is the movement of a macrophage in response to an external stimulus.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"regulation of macrophage chemotaxis","termid":"GO:0010758"},{"relation_name":"is_a","term_name":"negative regulation of macrophage migration","termid":"GO:1905522"},{"relation_name":"negatively_regulates","term_name":"macrophage chemotaxis","termid":"GO:0048246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage chemotaxis","termid":"GO:0010760"}


id: PBO:0050091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1","termid":"PBO:0050091"}


id: GO:0097044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 56 of the histone as a result of the detection of DNA damage within a cell.","definition_xrefs":["PMID:18344406","GOC:pr","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K56 acetylation in response to DNA damage (obsolete GO:0097044)","termid":"GO:0097044"}


id: GO:0043543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acyl group, any group or radical of the form RCO- where R is an organic group, to a protein amino acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein acylation","synonyms":[{"name":"protein amino acid acylation","type":"exact"}],"termid":"GO:0043543"}


id: PBO:0051660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internexin neuronal intermediate filament protein alpha","termid":"PBO:0051660"}


id: MONDO:0018819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fibular aplasia-tibial campomelia-oligosyndactyly syndrome (obsolete MONDO:0018819)","termid":"MONDO:0018819","xrefs":{"Monarch":{"xref_id":"0018819"}}}


id: PBO:0066778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 76","termid":"PBO:0066778"}


id: PBO:0050397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 2","termid":"PBO:0050397"}


id: MONDO:0971151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 122","secondary_identifiers":["OMIM:620869","MEDGEN:1860800","UMLS:C5935632"],"termid":"MONDO:0971151","xrefs":{"Monarch":{"xref_id":"0971151"}}}


id: PBO:0111829
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ domain","termid":"PBO:0111829"}


id: GO:1901898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:19708671","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of relaxation of muscle","termid":"GO:1901078"},{"relation_name":"is_a","term_name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"},{"relation_name":"negatively_regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of relaxation of cardiac muscle","synonyms":[{"name":"down regulation of relaxation of cardiac muscle","type":"exact"},{"name":"down-regulation of relaxation of cardiac muscle","type":"exact"},{"name":"downregulation of relaxation of cardiac muscle","type":"exact"},{"name":"inhibition of relaxation of cardiac muscle","type":"narrow"}],"termid":"GO:1901898"}


id: PBO:0091315
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae TEM1","termid":"PBO:0091315"}


id: PBO:0031396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_localization","termid":"PBO:0031396"}


id: MONDO:0006958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete SAPHO syndrome (obsolete MONDO:0006958)","termid":"MONDO:0006958","xrefs":{"Monarch":{"xref_id":"0006958"}}}


id: PBO:0080434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 18","termid":"PBO:0080434"}


id: PR:O94255
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nce103 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.05c","synonyms":[{"name":"Spom972h-nce103","type":"exact"},{"name":"carbonate dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94255"}


id: GO:0032219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of macromolecules forming part of a cell wall that contribute to cytogamy.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall macromolecule catabolic process","termid":"GO:0016998"},{"relation_name":"part_of","term_name":"cytogamy","termid":"GO:0000755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0000747"],"is_obsolete":false,"name":"cell wall macromolecule catabolic process involved in cytogamy","synonyms":[{"name":"cell wall macromolecule catabolic process during cytogamy","type":"related"}],"termid":"GO:0032219"}


id: PBO:0071473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 14","termid":"PBO:0071473"}


id: PBO:0074818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18A","termid":"PBO:0074818"}


id: FYPO:0003023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ethyl N-phenylcarbamate (EPC).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on EPC","synonyms":[{"name":"normal cell population growth in presence of EPC","type":"exact"},{"name":"normal cell population growth on EPC","type":"exact"},{"name":"normal cell population growth on ethyl N-phenylcarbamate","type":"exact"},{"name":"normal cellular response to EPC","type":"related"},{"name":"normal vegetative cell population growth on EPC","type":"exact"}],"termid":"FYPO:0003023"}


id: PBO:0001607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase/lipase (predicted)","termid":"PBO:0001607"}


id: MONDO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of any part of the urethra. It is characterized by decreased urinary stream and often other obstructive voiding symptoms.","definition_xrefs":["MESH:D014525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral obstruction","termid":"MONDO:0001556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral stricture","secondary_identifiers":["DOID:1829","HP:0012227","UMLS:C4551691","ICD9:598.8","NCIT:C79821","ICD9:598.9","icd11.foundation:611219038","SCTID:76618002","MEDGEN:1641821"],"synonyms":[{"name":"urethral stricture","type":"exact"},{"name":"urethral stricture (disease)","type":"exact"}],"termid":"MONDO:0002127","xrefs":{"Monarch":{"xref_id":"0002127"}}}


id: GO:0035477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of angioblast cell migration involved in selective angioblast sprouting.","definition_xrefs":["GOC:dgh","PMID:19815777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035477"}


id: PBO:0070753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 9","termid":"PBO:0070753"}


id: GO:0046242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete o-xylene biosynthetic process (obsolete GO:0046242)","synonyms":[{"name":"o-xylene anabolism","type":"exact"},{"name":"o-xylene biosynthesis","type":"exact"},{"name":"o-xylene biosynthetic process","type":"exact"},{"name":"o-xylene formation","type":"exact"},{"name":"o-xylene synthesis","type":"exact"},{"name":"ortho-xylene biosynthesis","type":"exact"},{"name":"ortho-xylene biosynthetic process","type":"exact"}],"termid":"GO:0046242"}


id: GO:0060325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the face are generated and organized. The face is the ventral division of the head.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"head morphogenesis","termid":"GO:0060323"},{"relation_name":"part_of","term_name":"face development","termid":"GO:0060324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"face morphogenesis","termid":"GO:0060325"}


id: PBO:0057058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR142 host genes","termid":"PBO:0057058"}


id: PBO:0113370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with NADP(H) oxidoreductase activity; transcription is regulated by Stb5p in response to NADPH depletion induced by diamide; promoter contains an Stb5p binding site and Stb5p binding is enriched at the promoter; negative regulator of nonselective autophagy; protein abundance increases in response to DNA replication stress","termid":"PBO:0113370"}


id: MONDO:0021034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of alopecia that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete hereditary alopecia (obsolete MONDO:0021034)","secondary_identifiers":["Orphanet:481771"],"synonyms":[{"name":"genetic alopecia","type":"exact"}],"termid":"MONDO:0021034","xrefs":{"Monarch":{"xref_id":"0021034"}}}


id: GO:0019057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts translation of mRNA into protein in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host translation","synonyms":[{"name":"host cell protein synthesis shutoff","type":"broad"},{"name":"modification by virus of host cell mRNA translation","type":"narrow"},{"name":"modulation by virus of host translation","type":"narrow"},{"name":"modulation of host translation by virus","type":"narrow"},{"name":"regulation of host mRNA translation","type":"exact"},{"name":"regulation of host translation","type":"exact"},{"name":"viral perturbation of host cell mRNA translation","type":"narrow"}],"termid":"GO:0019057"}


id: PBO:0090599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone Spt2","termid":"PBO:0090599"}


id: PBO:0005429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Snd1","termid":"PBO:0005429"}


id: GO:0044018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 36) = CoA + histone H3 N6-acetyl-L-lysine (position 36).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0034212","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H3K36 acetyltransferase activity","synonyms":[{"name":"histone H3-K36 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K36 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K36 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K36 specific)","type":"exact"}],"termid":"GO:0044018"}


id: GO:0016914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A gonadotrophic glycoprotein hormone secreted, in mammals, by the anterior pituitary gland; consists of alpha and beta subunits, the latter of which confers hormonal specificity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gonadotropin complex","termid":"GO:0061696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"follicle-stimulating hormone complex","synonyms":[{"name":"FSH complex","type":"exact"},{"name":"follicle stimulating hormone complex","type":"exact"}],"termid":"GO:0016914"}


id: GO:1903801
data:
  {"annotated_genes":["SJAG_05346","SJAG_03591","SJAG_03970","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89920],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[95192,93602,100775],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"The directed movement of L-leucine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:23895341","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-leucine transport","termid":"GO:0015820"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"L-leucine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0060356"],"synonyms":[{"name":"L-leucine import","type":"broad"},{"name":"L-leucine import into cell","type":"exact"},{"name":"L-leucine uptake","type":"narrow"},{"name":"leucine import","type":"broad"},{"name":"leucine uptake","type":"exact"}],"termid":"GO:1903801","terms_by_termid":{"GO:1905533":null,"GO:1905534":null}}


id: MONDO:0700187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition occurring in cats characterized by solitary or multiple cutaneous nodules and papules, which may metastasize late in the course of the disease. Lesions consist of poorly circumscribed histiocytic infiltrates of the superficial and deep dermis, with variable extension into the subcutis.","definition_xrefs":["NCIT:C176702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline progressive histiocytosis","termid":"MONDO:0700187","xrefs":{"Monarch":{"xref_id":"0700187"}}}


id: GO:2000920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucuronoarabinoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucuronoxylan catabolic process","termid":"GO:2000917"},{"relation_name":"is_a","term_name":"regulation of glucuronoarabinoxylan catabolic process","termid":"GO:2000918"},{"relation_name":"is_a","term_name":"positive regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000923"},{"relation_name":"positively_regulates","term_name":"glucuronoarabinoxylan catabolic process","termid":"GO:2000887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glucuronoarabinoxylan catabolic process","synonyms":[{"name":"positive regulation of glucuronoarabinoxylan catabolism","type":"exact"}],"termid":"GO:2000920"}


id: GO:0120320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The myosin-based contraction and retraction of a lateral pseudopodium.","definition_xrefs":["PMID:17623773","GOC:krc","GOC:pf","PMID:12953059","PMID:15483055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudopodium retraction","termid":"GO:0031270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral pseudopodium retraction","synonyms":[{"name":"lateral pseudopodium suppression","type":"related"}],"termid":"GO:0120320"}


id: GO:0030476
data:
  {"annotated_genes":["SJAG_00974","SJAG_04868","SJAG_03013","SJAG_01321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90044,90539,92091,93629],"is_not":false,"summary":null,"term":"GO:0030476"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an ascospore wall. During sporulation in Ascomycota, each ascospore nucleus becomes surrounded by a specialized spore wall, formed by deposition of spore wall components in the lumenal space between the outer and inner leaflets of the prospore membrane. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["PMID:14702385","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"spore wall assembly","termid":"GO:0042244"},{"relation_name":"is_a","term_name":"fungal-type cell wall assembly","termid":"GO:0071940"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore wall biogenesis","termid":"GO:0070591"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0030437","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"ascospore wall assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007152"],"synonyms":[{"name":"spore wall assembly","type":"broad"}],"termid":"GO:0030476","terms_by_termid":{"GO:0030476":null}}


id: GO:0018299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a Rieske 4Fe-4S iron-sulfur cluster via bis-L-cysteinyl bis-L-histidino diiron disulfide.","definition_xrefs":["RESID:AA0225"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into the Rieske iron-sulfur cluster via bis-L-cysteinyl bis-L-histidino diiron disulfide (obsolete GO:0018299)","synonyms":[{"name":"iron incorporation into the Rieske iron-sulphur cluster via bis-L-cysteinyl bis-L-histidino diiron disulphide","type":"exact"}],"termid":"GO:0018299"}


id: PBO:0066842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 142","termid":"PBO:0066842"}


id: PBO:0043357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clarin 3","termid":"PBO:0043357"}


id: PBO:0083352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene IES1/YFL013C","termid":"PBO:0083352"}


id: PBO:0086958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of phospholipase D (Spo14p); interacts with Spo14p and regulates its catalytic activity; capable of buffering the toxicity of C16:0 platelet activating factor, a lipid that accumulates intraneuronally in Alzheimer's patients","termid":"PBO:0086958"}


id: PBO:0027335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pre-replicative_complex_assembly","termid":"PBO:0027335"}


id: GO:0009155
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"deoxyribonucleotide catabolic process","termid":"GO:0009264"},{"relation_name":"is_a","term_name":"deoxyribose phosphate catabolic process","termid":"GO:0046386"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine deoxyribonucleotide breakdown","type":"exact"},{"name":"purine deoxyribonucleotide catabolism","type":"exact"},{"name":"purine deoxyribonucleotide degradation","type":"exact"}],"termid":"GO:0009155","terms_by_termid":{"GO:0035863":null}}


id: PBO:0043559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL5A1 antisense RNA 1","termid":"PBO:0043559"}


id: PBO:0040236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 6 beta","termid":"PBO:0040236"}


id: PBO:0063113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase 1","termid":"PBO:0063113"}


id: PBO:0071275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 9","termid":"PBO:0071275"}


id: MONDO:0022311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Crouzon syndrome","termid":"MONDO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"cote katsantoni syndrome","secondary_identifiers":["MESH:C536449","UMLS:C2931195","MEDGEN:419356","GARD:1554"],"synonyms":[{"name":"ectodermal dysplasia osteosclerosis","type":"related"}],"termid":"MONDO:0022311","xrefs":{"Monarch":{"xref_id":"0022311"}}}


id: PBO:0085104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein that negatively regulates pseudohyphal differentiation; plays a regulatory role in the cyclic AMP (cAMP)-dependent protein kinase (PKA) signal transduction pathway; relocalizes to the cytosol in response to hypoxia; SOK2 has a paralog, PHD1, that arose from the whole genome duplication","termid":"PBO:0085104"}


id: MONDO:0007383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stern-Lubinsky-Durrie syndrome is characterized by corneal epithelial changes (associated with photophobia and burning and watering of the eyes), diffuse palmoplantar hyperkeratosis, distal onycholysis, brachydactyly, short stature, dental problems, and premature birth. It has been described in seven individuals from three generations of one family. It is transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:3194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Stern-Lubinsky-Durrie syndrome","secondary_identifiers":["GARD:1531","OMIM:122440","icd11.foundation:1754695879","MESH:C537488","MEDGEN:342260","SCTID:723584003","UMLS:C1852542"],"synonyms":[{"name":"CORNEODERMATOOSSEOUS syndrome","type":"related"},{"name":"Cdo syndrome","type":"related"},{"name":"Stern Lubinsky Durrie syndrome","type":"related"},{"name":"corneal dystrophy epithelial and short stature","type":"related"},{"name":"corneal dystrophy, epithelial, with skin and skeletal changes","type":"related"},{"name":"corneo-dermato-osseous syndrome","type":"exact"}],"termid":"MONDO:0007383","xrefs":{"Monarch":{"xref_id":"0007383"}}}


id: PBO:0038506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 1","termid":"PBO:0038506"}


id: MONDO:1011696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatocytosis and gastrits, non-human animal","secondary_identifiers":["OMIA:001178"],"termid":"MONDO:1011696","xrefs":{"Monarch":{"xref_id":"1011696"}}}


id: GO:0150073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["GOC:aruk","PMID:26670206","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein-glutamine gamma-glutamyltransferase activity (obsolete GO:0150073)","termid":"GO:0150073"}


id: PBO:0060006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 26","termid":"PBO:0060006"}


id: MONDO:0032935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhizomelic limb shortening with dysmorphic features","secondary_identifiers":["UMLS:C5394173","OMIM:618821","MEDGEN:1720321"],"synonyms":[{"name":"RHIZOMELIC LIMB SHORTENING WITH DYSMORPHIC FEATURES","type":"related"},{"name":"RLSDF","type":"related"}],"termid":"MONDO:0032935","xrefs":{"Monarch":{"xref_id":"0032935"}}}


id: MONDO:0020251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare strabismus and restriction syndrome (obsolete MONDO:0020251)","secondary_identifiers":["Orphanet:98681"],"termid":"MONDO:0020251","xrefs":{"Monarch":{"xref_id":"0020251"}}}


id: MONDO:0021845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by a unilateral linear basal cell nevus, diffuse osteoma cutis, unilateral anodontia (missing teeth), and abnormal bone mineralization. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:2715453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"anodontia","termid":"MONDO:0008797"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aloi Tomasini Isaia syndrome","secondary_identifiers":["GARD:417","UMLS:C2931405","MEDGEN:419073","MESH:C537049"],"synonyms":[{"name":"basal cell nevus anodontia abnormal bone mineralization","type":"exact"},{"name":"basal cell nevus, anodontia, abnormal bone mineralization","type":"related"},{"name":"unilateral linear basal cell nevus associated with diffuse osteoma cutis, unilateral anodontia, and abnormal bone mineralization","type":"related"}],"termid":"MONDO:0021845","xrefs":{"Monarch":{"xref_id":"0021845"}}}


id: PBO:0018152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control Swt1 (predicted)","termid":"PBO:0018152"}


id: MONDO:0005005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.","definition_xrefs":["NCIT:C4033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"},{"relation_name":"is_a","term_name":"nonpapillary renal cell carcinoma","termid":"MONDO:0007763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"clear cell renal carcinoma","secondary_identifiers":["DOID:4467","EFO:0000349","ICD9:189.0","Orphanet:319276","GARD:9574","SCTID:254915003","UMLS:C0279702","MEDGEN:76018","ONCOTREE:CCRCC"],"synonyms":[{"name":"Grawitz tumor","type":"exact"},{"name":"Grawitz tumour","type":"exact"},{"name":"RCC, clear cell adenocarcinoma","type":"exact"},{"name":"clear cell adenocarcinoma of kidney","type":"exact"},{"name":"clear cell adenocarcinoma of the kidney","type":"exact"},{"name":"clear cell adenocarcinoma, kidney","type":"exact"},{"name":"clear cell carcinoma of kidney","type":"exact"},{"name":"clear cell carcinoma of the kidney","type":"exact"},{"name":"clear cell kidney carcinoma","type":"exact"},{"name":"clear cell renal cell cancer","type":"exact"},{"name":"clear cell renal cell carcinoma","type":"exact"},{"name":"clear-cell metastatic renal cell carcinoma","type":"related"},{"name":"conventional (clear cell) renal cell adenocarcinoma","type":"exact"},{"name":"conventional (clear cell) renal cell carcinoma","type":"exact"},{"name":"conventional renal cell carcinoma","type":"exact"},{"name":"hypernephroma","type":"related"},{"name":"kidney clear cell adenocarcinoma","type":"exact"},{"name":"kidney clear cell carcinoma","type":"exact"},{"name":"renal cell carcinoma, clear cell adenocarcinoma","type":"exact"},{"name":"renal clear cell adenocarcinoma","type":"exact"},{"name":"renal clear cell carcinoma","type":"exact"}],"termid":"MONDO:0005005","xrefs":{"Monarch":{"xref_id":"0005005"}}}


id: MONDO:0012208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratinopathic ichthyosis","termid":"MONDO:0017266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"congenital reticular ichthyosiform erythroderma","secondary_identifiers":["MESH:C563781","Orphanet:281190","icd11.foundation:565254051","UMLS:C3665704","GARD:17305","OMIM:609165","SCTID:703504006","MEDGEN:777141"],"synonyms":[{"name":"Aarau disease","type":"related"},{"name":"CRIE","type":"exact"},{"name":"IWC","type":"exact"},{"name":"erythroderma, ichthyosiform, congenital reticular","type":"related"},{"name":"erythrokeratoderma, reticular","type":"related"},{"name":"ichthyosis variegata","type":"exact"},{"name":"ichthyosis with confetti","type":"exact"}],"termid":"MONDO:0012208","xrefs":{"Monarch":{"xref_id":"0012208"}}}


id: FYPO:0007510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested at the mitotic G2/M phase transition in the absence of the mitotic DNA replication checkpoint. The previous S phase is completed, no replication intermediates can be observed, and cells do not undergo rereplication.","definition_xrefs":["PomBase:mah","PomBase:jh","PMID:17690116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition in absence of mitotic DNA replication checkpoint","synonyms":[{"name":"cell cycle arrest at G2/M phase transition in absence of mitotic DNA replication checkpoint during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest at mitotic G2/M phase transition in absence of mitotic DNA replication checkpoint during vegetative growth","type":"exact"},{"name":"mitotic cell cycle arrest at the G2/M transition with completed S phase","type":"related"}],"termid":"FYPO:0007510"}


id: PBO:0088491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin binding protein ortholog","termid":"PBO:0088491"}


id: GO:0031149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sorocarp stalk cell, any of the cellulose-covered cells that form the stalk of a sorocarp. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:mtg_sensu","PMID:4338436","GOC:mah","ISBN:0521583640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"sorocarp stalk development","termid":"GO:0031150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp stalk cell differentiation","synonyms":[{"name":"stalk cell differentiation","type":"exact"}],"termid":"GO:0031149"}


id: CHEBI:17568
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil","termid":"CHEBI:17568"}


id: PBO:0082038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-deoxyglucose-6-phosphate phosphatase; member of a family of low molecular weight phosphatases; confers 2-deoxyglucose resistance when overexpressed; DOG1 has a paralog, DOG2, that arose from a single-locus duplication; the last half of DOG1 and DOG2 are subject to gene conversions among S. cerevisiae, S. paradoxus, and S. mikatae","termid":"PBO:0082038"}


id: GO:0034543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-aminosalicylate + O2 = cis-4-amino-6-carboxy-2-oxo-hexa-3,5-dienoate.","definition_xrefs":["UM-BBD_reactionID:r0809"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-aminosalicylate dioxygenase activity (obsolete GO:0034543)","termid":"GO:0034543"}


id: MONDO:1011319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hematologic disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematologic disorder, non-human animal","termid":"MONDO:1011319","xrefs":{"Monarch":{"xref_id":"1011319"}}}


id: PBO:0070957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 12","termid":"PBO:0070957"}


id: PBO:0088173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xylitol dehydrogenase; involved in utilization of xylose as a carbon source; not present in S288C, but located in a 65kb insertion on the right arm of chromosome XV in many wine strains such as EC1118 and AWRI1631","termid":"PBO:0088173"}


id: PBO:0036390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human LCHN ortholog","termid":"PBO:0036390"}


id: PATO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conical quality inhering in a bearer by virtue of the bearer's resembling a cone, with the pointed end attached to an organism.","definition_xrefs":["wiktionary:http://en.wiktionary.org/wiki/obconical"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conical","termid":"PATO:0002021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obconical","termid":"PATO:0002347"}


id: GO:1990590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex consisting of ATF1 and ATF4 subunits that is capable of binding to cAMP response element (CRE) (consensus: 5'-GTGACGT[AC][AG]-3') of the GRP78 (HSPA5) promoter. Involved in the ER stress response pathway.","definition_xrefs":["PMID:12871976","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"ATF1-ATF4 transcription factor complex","termid":"GO:1990590"}


id: PBO:0031898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartate aminotransferase Maa1 (predicted)","termid":"PBO:0031898"}


id: MOD:00058
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine to N-acetyl-L-methionine.","definition_xrefs":["RESID:AA0049","PubMed:7944406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-methionine","synonyms":[{"name":"(2S)-2-acetamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-acetylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-acetylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-acetylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"AcMet","type":"exact"},{"name":"MOD_RES N-acetylmethionine","type":"exact"},{"name":"N-acetyl-L-methionine","type":"exact"},{"name":"N-acetylated L-methionine","type":"exact"},{"name":"acetylmethionine","type":"exact"},{"name":"methionamine","type":"exact"}],"termid":"MOD:00058"}


id: PATO:0000696
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000696 texture value (obsolete PATO:0000696)","termid":"PATO:0000696"}


id: GO:1904911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of RNA localization to telomere.","definition_xrefs":["GOC:BHF_telomere","GOC:rph","PMID:26586433","GOC:BHF","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of establishment of RNA localization to telomere","termid":"GO:1904910"},{"relation_name":"negatively_regulates","term_name":"establishment of RNA localization to telomere","termid":"GO:0097694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of RNA localization to telomere","synonyms":[{"name":"down regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"down regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"down-regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"down-regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"downregulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"downregulation of establishment of RNA localization to telomere","type":"exact"},{"name":"inhibition of establishment of RNA localisation to telomere","type":"narrow"},{"name":"inhibition of establishment of RNA localization to telomere","type":"narrow"},{"name":"negative regulation of establishment of RNA localisation to telomere","type":"exact"}],"termid":"GO:1904911"}


id: PBO:0064729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 65","termid":"PBO:0064729"}


id: GO:0061774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of sister chromatid cohesion by the topological unlinking of a cohesin ring to DNA.","definition_xrefs":["GOC:dph","PMID:26687354","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete cohesin unloading (obsolete GO:0061774)","synonyms":[{"name":"DNA exit from the cohesin ring","type":"exact"}],"termid":"GO:0061774"}


id: PBO:0034239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-target_participant_in","termid":"PBO:0034239"}


id: PBO:0038835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 1","termid":"PBO:0038835"}


id: MONDO:0003041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mesenchymal chondrosarcoma occurring in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"mesenchymal chondrosarcoma","termid":"MONDO:0006853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric mesenchymal chondrosarcoma","secondary_identifiers":["NCIT:C27374","MEDGEN:232063","UMLS:C1332982","DOID:4546"],"synonyms":[{"name":"childhood mesenchymal chondrosarcoma","type":"exact"},{"name":"mesenchymal chondrosarcoma","type":"broad"},{"name":"mesenchymal chondrosarcoma of childhood","type":"exact"},{"name":"pediatric mesenchymal chondrosarcoma","type":"exact"}],"termid":"MONDO:0003041","xrefs":{"Monarch":{"xref_id":"0003041"}}}


id: PBO:0055336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2764","termid":"PBO:0055336"}


id: GO:0032245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a purine nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of purine nucleoside transport","termid":"GO:0032245"}


id: PR:O13864
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An importin subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10527:SF1","PRO:DNx","OMA:SCHPO01479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit beta-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B1.03c","secondary_identifiers":["UniProtKB:O13864"],"synonyms":[{"name":"Spom972h-KPNB1","type":"exact"},{"name":"importin-95 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit beta-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin-95 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13864"}


id: PBO:0078712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-7","termid":"PBO:0078712"}


id: PATO:0000521
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000521 drug sensitivity value (obsolete PATO:0000521)","termid":"PATO:0000521"}


id: PBO:0031320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_pravastatin","termid":"PBO:0031320"}


id: PBO:0063704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycan recognition protein 3","termid":"PBO:0063704"}


id: FYPO:0007687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to nuclear exosome foci is normal (i.e. indistinguishable from wild type) during meiosis. Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle.","definition_xrefs":["PMID:33574613","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nuclear exosome focus during meiosis","synonyms":[{"name":"normal protein localisation to nuclear exosome focus during meiosis","type":"exact"},{"name":"normal protein localization to Mmi1 focus during meiosis","type":"exact"},{"name":"normal protein localization to Mmi1 nuclear focus during meiosis","type":"exact"},{"name":"normal protein localization to nuclear exosome foci during meiosis","type":"exact"},{"name":"normal protein localization to nuclear exosome focus during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007687"}


id: MONDO:0008714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrofacial dysostosis Rodriguez type is a multiple malformative syndrome in which mandibulofacial dysostosis and severe limb reduction defects are associated with complex malformations of different organs and systems especially the CNS, urogenital tract, heart, and lungs. The mandibulofacial defect, characterized by extremely severe microretrognathism and cleft palate, causes death by respiratory distress. Limb reduction is severe and includes shoulder and pelvis hypoplasia, phocomelia with humerus hypoplasia, absent radius and ulna, complete absence of long bones of the legs, and various hand anomalies, predominantly preaxial reduction (absent thumbs). Other features include CNS malformations (agenesis of corpus callosum and acqueductal stenosis), lung anomalies (absent lung lobulation), complex cardiac malformations, and unicornis uterus. These infants also show facial dysmorphism and ear anomalies. The condition is a rare with an autosomal recessive mode of inheritance. The prognosis is poor and this condition leads to death in utero or shortly after birth.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrofacial dysostosis Rodriguez type","secondary_identifiers":["MEDGEN:349730","MESH:C538183","Orphanet:1788","OMIM:201170","SCTID:720430002","DOID:0060383","GARD:496","UMLS:C1860119"],"synonyms":[{"name":"Rodriguez lethal acrofacial dysostosis syndrome","type":"related"},{"name":"acrofacial dysostosis syndrome of Rodriguez","type":"related"},{"name":"acrofacial dysostosis, Rodríguez type","type":"related"},{"name":"acrofacial dysostosis, syndrome of Rodriguez","type":"exact"}],"termid":"MONDO:0008714","xrefs":{"Monarch":{"xref_id":"0008714"}}}


id: GO:0031294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the B- or T cell receptor to augment B- or T cell activation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte costimulation","synonyms":[{"name":"lymphocyte co-stimulation","type":"exact"}],"termid":"GO:0031294"}


id: GO:0010505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency or rate of cell cycle arrest in response to nitrogen starvation.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cell cycle arrest in response to nitrogen starvation (obsolete GO:0010505)","termid":"GO:0010505"}


id: PBO:0003848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex gamma subunit Cct3","termid":"PBO:0003848"}


id: MONDO:0014792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone Paget disease","termid":"MONDO:0005382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paget disease of bone 6","secondary_identifiers":["DOID:0081369","MEDGEN:908743","OMIM:616833","UMLS:C4085250"],"synonyms":[{"name":"PDB6","type":"exact"},{"name":"Paget disease of bone 6","type":"exact"},{"name":"Paget disease of bone 6; PDB6","type":"exact"},{"name":"Paget disease of bone type 6","type":"exact"}],"termid":"MONDO:0014792","xrefs":{"Monarch":{"xref_id":"0014792"}}}


id: MONDO:0044745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic injuries to the brain, cranial nerves, spinal cord, autonomic nervous system, or neuromuscular system, including iatrogenic injuries induced by surgical procedures.","definition_xrefs":["MESH:D020196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nervous system injury","secondary_identifiers":["SCTID:128239009","EFO:0009490"],"synonyms":[{"name":"Injuries, craniocervical","type":"related"},{"name":"Injuries, nervous system","type":"related"},{"name":"craniocervical Injuries","type":"related"},{"name":"craniocervical injury","type":"related"},{"name":"injury of nervous system","type":"exact"},{"name":"injury, craniocervical","type":"related"},{"name":"injury, nervous system","type":"related"},{"name":"nervous system Injuries","type":"related"},{"name":"nervous system Traumas","type":"related"},{"name":"nervous system injury","type":"exact"},{"name":"nervous system trauma","type":"related"}],"termid":"MONDO:0044745","xrefs":{"Monarch":{"xref_id":"0044745"}}}


id: MONDO:0025510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granulomatous disease caused by the aquatic organism pythium insidiosum and occurring primarily in horses, cattle, dogs, cats, and fishes. It is classified into three forms: ocular, cutaneous, and arterial.","definition_xrefs":["MESH:D058968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease, non-human animal","termid":"MONDO:0700049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pythiosis, non-human animal","termid":"MONDO:0025510","xrefs":{"Monarch":{"xref_id":"0025510"}}}


id: PBO:0075036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-47","termid":"PBO:0075036"}


id: GO:0048876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of the internal steady state of the amount of a chemical at the level of the retina.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical homeostasis within retina (obsolete GO:0048876)","termid":"GO:0048876"}


id: MONDO:0012120
data:
  {"annotated_genes":["SJAG_03310"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88272],"is_not":false,"summary":null,"term":"MONDO:0012120"}]},"cv_name":"mondo","definition":"Pyruvate dehydrogenase phosphatase deficiency is a very rare subtype of pyruvate dehydrogenase deficiency (PDHD) characterized by lactic acidemia in the neonatal period.","definition_xrefs":["Orphanet:79246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency","termid":"MONDO:0019169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03310":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005244","MONDO:0004069"],"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9888","UMLS:C1837429","MEDGEN:332448","MESH:C536258","icd11.foundation:1709497558","OMIM:608782"],"synonyms":[{"name":"PDH phosphatase deficiency","type":"exact"},{"name":"PDHPD","type":"related"},{"name":"lactic acidemia with pyruvate dehydrogenase phosphatase deficiency","type":"related"},{"name":"pyruvate dehydrogenase phosphatase deficiency","type":"exact"}],"termid":"MONDO:0012120","terms_by_termid":{"MONDO:0012120":null},"xrefs":{"Monarch":{"xref_id":"0012120"}}}


id: PATO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to be reduced to smaller pieces with little effort.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Friability"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"friability","termid":"PATO:0002405"}


id: MONDO:0012986
data:
  {"annotated_genes":["SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87318],"is_not":false,"summary":null,"term":"MONDO:0012986"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral polymicrogyria","termid":"MONDO:0017091"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral parasagittal parieto-occipital polymicrogyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4013648","DOID:0080923","MESH:C567201","GARD:10785","MEDGEN:862085","OMIM:612691","Orphanet:208441","icd11.foundation:293410499"],"synonyms":[{"name":"BTOP","type":"related"},{"name":"polymicrogyria, bilateral temporooccipital","type":"related"}],"termid":"MONDO:0012986","terms_by_termid":{"MONDO:0012986":null},"xrefs":{"Monarch":{"xref_id":"0012986"}}}


id: GO:1990208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the RNA levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18703740","PMID:12182338"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of RNA levels in host (obsolete GO:1990208)","termid":"GO:1990208"}


id: PBO:0091039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit F","termid":"PBO:0091039"}


id: RO:0002588
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_organization_of","termid":"RO:0002592"},{"relation_name":"is_a","term_name":"results_in_formation_of","termid":"_global:results_in_formation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_assembly_of","termid":"RO:0002588"}


id: GO:0050929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the directed movement of a motile cell or organism towards a lower concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of negative chemotaxis","termid":"GO:0050924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of negative chemotaxis","termid":"GO:0050929"}


id: PBO:0075836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin receptor 4","termid":"PBO:0075836"}


id: GO:1903729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plasma membrane organization.","definition_xrefs":["PMID:24514900","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of plasma membrane organization","synonyms":[{"name":"regulation of plasma membrane organisation","type":"exact"},{"name":"regulation of plasma membrane organization and biogenesis","type":"related"}],"termid":"GO:1903729"}


id: GO:0045880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smoothened signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway","termid":"GO:0008589"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of smoothened signaling pathway","secondary_identifiers":["GO:0045878"],"synonyms":[{"name":"positive regulation of smoothened by patched","type":"related"},{"name":"stimulation of smoothened signaling pathway","type":"narrow"},{"name":"up regulation of smoothened signaling pathway","type":"exact"},{"name":"up-regulation of smoothened signaling pathway","type":"exact"},{"name":"upregulation of smoothened signaling pathway","type":"exact"},{"name":"positive regulation of smoothened receptor activity by patched","type":"related"},{"name":"positive regulation of smoothened signalling pathway","type":"exact"},{"name":"activation of smoothened signaling pathway","type":"narrow"},{"name":"positive regulation of hedgehog signaling pathway","type":"exact"},{"name":"positive regulation of hh signaling pathway","type":"exact"}],"termid":"GO:0045880"}


id: MONDO:0000158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of hip abnormalities commonly presenting in infancy involving the relationship between the femoral head and the acetabulum and that includes subluxation or dislocation at rest or upon provocation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"developmental dysplasia of the hip","secondary_identifiers":["EFO:1000648","OMIMPS:142700","MESH:D000082602","SCTID:52781008","UMLS:C4551649","DOID:0060930","ICD9:755.63","MEDGEN:1640560"],"synonyms":[{"name":"congenital acetabular dysplasia","type":"related"},{"name":"congenital dysplasia of the hip","type":"related"},{"name":"congenital hip dysplasia","type":"exact"},{"name":"dysplasia of acetabulum","type":"related"}],"termid":"MONDO:0000158","xrefs":{"Monarch":{"xref_id":"0000158"}}}


id: FYPO:0000819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of P-factor, the mating pheromone produced by mating type plus cells, released into the growth medium is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of pheromone in growth medium","termid":"FYPO:0000817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"increased concentration of P-factor in growth medium","synonyms":[{"name":"increased accumulation of P-factor in growth medium","type":"related"},{"name":"increased level of P-factor in growth medium","type":"exact"},{"name":"increased release of P-factor into growth medium","type":"related"}],"termid":"FYPO:0000819"}


id: MONDO:0007266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TNNT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 2","secondary_identifiers":["OMIM:115195","MESH:C566171","UMLS:C1861864","MEDGEN:349383","NCIT:C142892","DOID:0110308"],"synonyms":[{"name":"CMH2","type":"exact"},{"name":"TNNT2 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 2","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 2","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 2","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 2","type":"exact"},{"name":"familial hypertrophic cardiomyopathy type 2","type":"exact"},{"name":"hypertrophic cardiomyopathy 2","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in TNNT2","type":"exact"},{"name":"hypertrophic cardiomyopathy type 2","type":"exact"}],"termid":"MONDO:0007266","xrefs":{"Monarch":{"xref_id":"0007266"}}}


id: MONDO:0005872
data:
  {"annotated_genes":["SJAG_01671","SJAG_04755","SJAG_00260","SJAG_03677","SJAG_05313","SJAG_01895"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[88854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[89158,89159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the nervous system.","definition_xrefs":["NCIT:C4788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"nervous system neoplasm","termid":"MONDO:0021248"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_03677":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nervous system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3093","UMLS:C0497549","MEDGEN:99231","ICD9:192.9","ICD9:192","SCTID:372063002","ICD9:192.8","EFO:0007392","MESH:D009423"],"synonyms":[{"name":"cancer of nervous system","type":"exact"},{"name":"malignant neoplasm of nervous system","type":"exact"},{"name":"malignant neoplasm of the nervous system","type":"exact"},{"name":"malignant nervous system neoplasm","type":"exact"},{"name":"malignant nervous system tumor","type":"exact"},{"name":"malignant nervous system tumour","type":"exact"},{"name":"malignant tumor of nervous system","type":"exact"},{"name":"malignant tumor of the nervous system","type":"exact"},{"name":"malignant tumour of nervous system","type":"exact"},{"name":"malignant tumour of the nervous system","type":"exact"},{"name":"nervous system cancer","type":"exact"},{"name":"nervous system neoplasm","type":"broad"},{"name":"nervous system neoplasms, malignant","type":"exact"},{"name":"neural neoplasm","type":"broad"},{"name":"neural tumor","type":"broad"},{"name":"neural tumour","type":"broad"},{"name":"tumor of the nervous system","type":"broad"},{"name":"tumour of the nervous system","type":"broad"}],"termid":"MONDO:0005872","terms_by_termid":{"MONDO:0007273":null,"MONDO:0011121":null,"MONDO:0013224":null,"MONDO:0013602":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0005872"}}}


id: GO:0002844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peripheral tolerance induction","termid":"GO:0002659"},{"relation_name":"is_a","term_name":"negative regulation of immune response to tumor cell","termid":"GO:0002838"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to tumor cell","termid":"GO:0002843"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to tumor cell","termid":"GO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to tumor cell","synonyms":[{"name":"down regulation of tolerance induction to tumor cell","type":"exact"},{"name":"down-regulation of tolerance induction to tumor cell","type":"exact"},{"name":"downregulation of tolerance induction to tumor cell","type":"exact"},{"name":"inhibition of tolerance induction to tumor cell","type":"narrow"},{"name":"negative regulation of tolerance induction to tumour cell","type":"exact"}],"termid":"GO:0002844"}


id: GO:1905814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of motor neuron axon guidance.","definition_xrefs":["PMID:18434533","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"is_a","term_name":"regulation of motor neuron axon guidance","termid":"GO:1905812"},{"relation_name":"positively_regulates","term_name":"motor neuron axon guidance","termid":"GO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of motor neuron axon guidance","synonyms":[{"name":"activation of motoneuron axon guidance","type":"narrow"},{"name":"activation of motor axon guidance","type":"narrow"},{"name":"activation of motor axon pathfinding","type":"narrow"},{"name":"activation of motor neuron axon guidance","type":"narrow"},{"name":"positive regulation of motoneuron axon guidance","type":"exact"},{"name":"positive regulation of motor axon guidance","type":"exact"},{"name":"positive regulation of motor axon pathfinding","type":"exact"},{"name":"up regulation of motoneuron axon guidance","type":"exact"},{"name":"up regulation of motor axon guidance","type":"exact"},{"name":"up regulation of motor axon pathfinding","type":"exact"},{"name":"up regulation of motor neuron axon guidance","type":"exact"},{"name":"up-regulation of motoneuron axon guidance","type":"exact"},{"name":"up-regulation of motor axon guidance","type":"exact"},{"name":"up-regulation of motor axon pathfinding","type":"exact"},{"name":"up-regulation of motor neuron axon guidance","type":"exact"},{"name":"upregulation of motoneuron axon guidance","type":"exact"},{"name":"upregulation of motor axon guidance","type":"exact"},{"name":"upregulation of motor axon pathfinding","type":"exact"},{"name":"upregulation of motor neuron axon guidance","type":"exact"}],"termid":"GO:1905814"}


id: GO:0030400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A recruiting factor or adaptor molecule associated with the proteasome that activates degradation of specific proteasomal substrates and links them to the degradation machinery; it is not involved in ubiquitination; does not possess proteolytic activity.","definition_xrefs":["PMID:11500370"],"gene_count":0,"genotype_count":0,"name":"obsolete protease substrate recruitment factor activity (obsolete GO:0030400)","synonyms":[{"name":"protease substrate recruitment factor activity","type":"exact"}],"termid":"GO:0030400"}


id: PBO:0072144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 21","termid":"PBO:0072144"}


id: PBO:0079134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE domain containing 1","termid":"PBO:0079134"}


id: GO:0030017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"sarcomere","secondary_identifiers":["Wikipedia:Sarcomere"],"termid":"GO:0030017"}


id: FYPO:0002126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane during vegetative growth","synonyms":[{"name":"abolished protein localisation to plasma membrane during vegetative growth","type":"exact"},{"name":"abolished protein localization in plasma membrane during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell membrane during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane during mitotic cell cycle","type":"related"},{"name":"protein localization to plasma membrane abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002126"}


id: GO:0005785
data:
  {"annotated_genes":["SJAG_01558","SJAG_00360"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70548,96142],"is_not":false,"summary":null,"term":"GO:0005785"}]},"cv_name":"cellular_component","definition":"A transmembrane heterodimeric protein located in the membrane of the rough endoplasmic reticulum. Both subunits contain GTPase domains with which signal recognition particle interacts. In the presence of GTP and SRP receptor, SRP is released from the ribosome-nascent chain complex.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00360":null,"SJAG_01558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005789","GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"signal recognition particle receptor complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"SR complex","type":"exact"},{"name":"docking protein complex","type":"related"}],"termid":"GO:0005785","terms_by_termid":{"GO:0005785":null}}


id: PBO:0059363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18A","termid":"PBO:0059363"}


id: GO:0010572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"positively_regulates","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet activation","termid":"GO:0010572"}


id: GO:0060174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process pertaining to the initial formation of a limb bud from unspecified parts. This process begins with the formation of a local condensation of mesenchyme cells within the prospective limb field, and ends when a limb bud is recognizable.","definition_xrefs":["GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"limb morphogenesis","termid":"GO:0035108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb bud formation","synonyms":[{"name":"limb formation","type":"exact"},{"name":"limbbud formation","type":"exact"}],"termid":"GO:0060174"}


id: PBO:0090987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg2","termid":"PBO:0090987"}


id: PBO:0000552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L family cyclin (predicted)","termid":"PBO:0000552"}


id: SO:0000730
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gap in the sequence of known length. The unknown bases are filled in with N's.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap","synonyms":[{"name":"INSDC_feature:assembly_gap","type":"narrow"},{"name":"INSDC_feature:gap","type":"exact"}],"termid":"SO:0000730"}


id: PBO:0049152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1A","termid":"PBO:0049152"}


id: PBO:0047531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 5","termid":"PBO:0047531"}


id: PR:Q7Z9I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC409.08 gene.","definition_xrefs":["UniProtKB:Q7Z9I0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C409.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.08","synonyms":[{"name":"Spom972h-SPBC409.08","type":"exact"}],"termid":"PR:Q7Z9I0"}


id: PBO:0083261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 100% of YLR465C overlaps the uncharacterized ORF YLR464W and 86% of YLR465C overlaps the verified gene YRF1-4","termid":"PBO:0083261"}


id: PBO:0041399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C6orf47 antisense RNA 1","termid":"PBO:0041399"}


id: GO:0004194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Preferential cleavage: hydrophobic, preferably aromatic, residues in P1 and P1' positions. Cleaves Phe1-Val2, Gln4-His5, Glu13-Ala14, Ala14-Leu15, Leu15-Tyr16, Tyr16-Leu17, Gly23-Phe24, Phe24-Phe25 and Phe25-Tyr26 bonds in the B chain of insulin.","definition_xrefs":["EC:3.4.23.1"],"gene_count":0,"genotype_count":0,"name":"obsolete pepsin A activity (obsolete GO:0004194)","synonyms":[{"name":"P I","type":"related"},{"name":"P II","type":"related"},{"name":"elixir lactate of pepsin","type":"related"},{"name":"fundus-pepsin","type":"related"},{"name":"lactated pepsin","type":"related"},{"name":"lactated pepsin elixir","type":"related"},{"name":"pepsin A activity","type":"exact"},{"name":"pepsin D","type":"related"},{"name":"pepsin R","type":"related"},{"name":"pepsin activity","type":"broad"},{"name":"pepsin fortior","type":"related"}],"termid":"GO:0004194"}


id: MONDO:0003919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited metabolic disorder (obsolete MONDO:0003919)","termid":"MONDO:0003919","xrefs":{"Monarch":{"xref_id":"0003919"}}}


id: PBO:0063650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 7","termid":"PBO:0063650"}


id: PBO:0044206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 4","termid":"PBO:0044206"}


id: GO:0010938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of tubulin heterodimers from one or both ends of a cytoplasmic microtubule.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule depolymerization","termid":"GO:0007019"},{"relation_name":"is_a","term_name":"cytoplasmic microtubule organization","termid":"GO:0031122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"}


id: MONDO:0001318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"functional gastric disease","secondary_identifiers":["SCTID:150541000119104","ICD9:306.4","SCTID:386211005","MEDGEN:510176","ICD9:536.9","UMLS:C0156084","DOID:1159","ICD9:536.8"],"synonyms":[{"name":"disorder of function of stomach","type":"exact"},{"name":"disorder of gastric function","type":"exact"},{"name":"disorder of stomach function","type":"exact"},{"name":"functional gastric disorder","type":"exact"},{"name":"functional gastric disturbance","type":"related"}],"termid":"MONDO:0001318","xrefs":{"Monarch":{"xref_id":"0001318"}}}


id: GO:0033255
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses histone acetyltransferase activity and links histone acetylation to the assembly of transcriptionally silent chromatin. In vitro, the complex acetylates lysine 16 of histone H4 and lysine 14 of histone H3, although the latter may not be relevant in vivo. The complex contains a catalytic subunit and at least two other subunits; in Saccharomyces, the catalytic subunit is Sas2p and additional subunits are Sas4p and Sas5p.","definition_xrefs":["PMID:12626510","PMID:15788653","PMID:11731480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piccolo histone acetyltransferase complex","termid":"GO:0032777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SAS acetyltransferase complex","synonyms":[{"name":"SAS-I complex","type":"exact"}],"termid":"GO:0033255"}


id: PBO:0034668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_monopolar_protein_localization_to_cell_tip","termid":"PBO:0034668"}


id: GO:0140943
data:
  {"annotated_genes":["SJAG_01146"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119029],"is_not":false,"summary":null,"term":"GO:0140943"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl(20)-[histone H4] + 3 S-adenosyl-L-methionine = 3 H+ + N(6),N(6),N(6)-trimethyl-L-lysyl(20)-[histone H4] + 3 S-adenosyl-L-homocysteine. This reaction is the addition of three methyl groups to the lysine residue at position 20 of the histone H4 protein, producing histone H4K20me3.","definition_xrefs":["RHEA:64456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K20 methyltransferase activity","termid":"GO:0042799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0008276","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"histone H4K20 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.372"],"synonyms":[{"name":"histone H4K20 trimethylase activity","type":"exact"},{"name":"histone H4K20 trimethylation","type":"exact"},{"name":"histone lysine N-trimethyltransferase activity (H4-K20 specific)","type":"exact"}],"termid":"GO:0140943","terms_by_termid":{"GO:0140943":null}}


id: GO:0102999
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 2-hydroxylamino-4,6-dinitrotoluene = 2-hydroxylamino-4,6-dinitrotoluene-O-glucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:2-hydroxylamino-4,6-dinitrotoluene-O-glucosyltransferase activity (obsolete GO:0102999)","termid":"GO:0102999"}


id: GO:0170061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to and delivering nickel ions to a target protein.","definition_xrefs":["PMID:32133383","PMID:34530332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"nickel chaperone activity","synonyms":[{"name":"nickel carrier activity","type":"exact"}],"termid":"GO:0170061"}


id: GO:0099637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptors.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter receptor transport","termid":"GO:0099637"}


id: PBO:0076075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase receptor associated protein","termid":"PBO:0076075"}


id: GO:0060231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity, forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition","synonyms":[{"name":"epithelial cell differentiation from mesenchymal cell","type":"exact"},{"name":"mesenchymal-epithelial transition","type":"exact"}],"termid":"GO:0060231"}


id: GO:0102210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a rhamnogalacturonan type I = [rhamnogalacturonan I oligosaccharide]-alpha-L-rhamnose + 4-deoxy-4,5-unsaturated D-galactopyranosyluronate-[rhamnogalacturonan I oligosaccharide].","definition_xrefs":["GOC:pz","EC:4.2.2.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"rhamnogalacturonan endolyase activity","secondary_identifiers":["MetaCyc:RXN-12173"],"termid":"GO:0102210"}


id: PBO:0029830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_stubby_vegetative_cell_population_(obsolete_FYPO:0002407)","termid":"PBO:0029830"}


id: PBO:0080939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc activated ion channel pseudogene 1","termid":"PBO:0080939"}


id: GO:0044837
data:
  {"annotated_genes":["SJAG_01787","SJAG_00082","SJAG_02700","SJAG_00700","SJAG_00938","SJAG_00228","SJAG_02795","SJAG_00845","SJAG_03048","SJAG_03379","SJAG_01943","SJAG_01732","SJAG_04930","SJAG_01665","SJAG_00279","SJAG_04982","SJAG_04077","SJAG_04498","SJAG_02838","SJAG_03088","SJAG_03025","SJAG_02592","SJAG_01805","SJAG_02831","SJAG_01894","SJAG_03045","SJAG_04703","SJAG_02864","SJAG_02392","SJAG_00268","SJAG_04621","SJAG_04597","SJAG_03596","SJAG_02431","SJAG_01143","SJAG_03703","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107088],"is_not":false,"summary":null,"term":"GO:0044837"},{"annotations":[110092,99922,100180,91170],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[112777,113851,120494,121668,59919,100795,99544,114292,77356,90093,70621,76725,78105,97171,68532,74321,94403,104484,58748,99815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[79212],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[90094,100796,97172,99545,99925,58747,102841,114293,102610,104341],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[100169],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000432"},{"annotations":[92614,96236,97734,105618,112741,104284],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[91842,96278],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[95674,121662],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of an actomyosin contractile ring.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"cortical actin cytoskeleton organization","termid":"GO:0030866"},{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00845":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03088":null,"SJAG_03379":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"actomyosin contractile ring organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"cytokinesis, actomyosin contractile ring organization","type":"exact"}],"termid":"GO:0044837","terms_by_termid":{"GO:0044837":null,"GO:0071520":null,"GO:0120306":null,"GO:1902404":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: MONDO:0010682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myoclonic epilepsy, progressive, X-linked (obsolete MONDO:0010682)","secondary_identifiers":["OMIM:310370"],"synonyms":[{"name":"myoclonic epilepsy, progressive","type":"exact"}],"termid":"MONDO:0010682","xrefs":{"Monarch":{"xref_id":"0010682"}}}


id: PBO:0074765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 1C","termid":"PBO:0074765"}


id: PBO:0057666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1257","termid":"PBO:0057666"}


id: GO:0019763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the Fc region of an immunoglobulin protein and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0198547684","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"immunoglobulin receptor activity","secondary_identifiers":["GO:0016489"],"synonyms":[{"name":"FC receptor activity","type":"exact"}],"termid":"GO:0019763"}


id: GO:0106314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ammonium hydroxide + 3 NADP+ + H2O = nitrite + 3 NADPH + 3 H+.","definition_xrefs":["RHEA:24632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrite reductase [NAD(P)H] activity","termid":"GO:0008942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"nitrite reductase (NADPH) activity","termid":"GO:0106314"}


id: FYPO:0003953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which triglyceride biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal triglyceride biosynthetic process","synonyms":[{"name":"abnormal TAG biosynthetic process","type":"exact"},{"name":"abnormal triacylglycerol biosynthesis","type":"exact"},{"name":"abnormal triacylglycerol biosynthetic process","type":"exact"},{"name":"abnormal triglyceride biosynthesis","type":"exact"},{"name":"abnormal triglyceride biosynthetic process during mitotic cell cycle","type":"related"},{"name":"abnormal triglyceride biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0003953"}


id: GO:1901748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene D4.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene D4 metabolic process","synonyms":[{"name":"leukotriene D4 metabolism","type":"exact"}],"termid":"GO:1901748"}


id: GO:0071170
data:
  {"annotated_genes":["SJAG_00073","SJAG_00247","SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117027],"is_not":false,"summary":null,"term":"GO:0071170"},{"annotations":[104190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071946"},{"annotations":[95215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"A DNA replication termination process that takes place at a specific termination site.","definition_xrefs":["GOC:mah","PMID:12009298","PMID:18723894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication termination","termid":"GO:0006274"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"site-specific DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071170","terms_by_termid":{"GO:0071170":null,"GO:0071171":null,"GO:0071946":null}}


id: PBO:0017039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endonuclease, possibly DNA damage related (predicted)","termid":"PBO:0017039"}


id: MONDO:0009093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatoleukodystrophy is characterized by the association of a progressive leukodystrophy marked by generalized mental and motor impairment with the presence of thickened and wrinkled skin. It has been described in a Japanese brother and sister born to healthy parents. Both patients died in early childhood.","definition_xrefs":["Orphanet:1659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"dermatoleukodystrophy","secondary_identifiers":["MEDGEN:387794","GARD:1813","SCTID:733044009","UMLS:C1857314","MESH:C538220","OMIM:221790"],"synonyms":[{"name":"Dermatoleukodystrophy","type":"exact"}],"termid":"MONDO:0009093","xrefs":{"Monarch":{"xref_id":"0009093"}}}


id: PBO:0017692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm1 (predicted)","termid":"PBO:0017692"}


id: GO:1902040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of seed dormancy process.","definition_xrefs":["PMID:23378449","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of seed dormancy process","termid":"GO:2000033"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed dormancy process","synonyms":[{"name":"activation of seed dormancy","type":"related"},{"name":"activation of seed dormancy process","type":"narrow"},{"name":"positive regulation of seed dormancy","type":"related"},{"name":"up regulation of seed dormancy","type":"related"},{"name":"up regulation of seed dormancy process","type":"exact"},{"name":"up-regulation of seed dormancy","type":"related"},{"name":"up-regulation of seed dormancy process","type":"exact"},{"name":"upregulation of seed dormancy","type":"related"},{"name":"upregulation of seed dormancy process","type":"exact"}],"termid":"GO:1902040"}


id: GO:0106255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A hydroperoxy icosatetraenoate = a hydroxy epoxy icosatrienoate.","definition_xrefs":["RHEA:55560","PMID:12881489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroperoxy icosatetraenoate isomerase activity","secondary_identifiers":["EC:5.4.4.7"],"termid":"GO:0106255"}


id: PBO:0076471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF family member associated NFKB activator","termid":"PBO:0076471"}


id: PBO:0038416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within,_negative_effect","termid":"PBO:0038416"}


id: PR:P21696
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P21696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase [NAD(+)] 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.05","synonyms":[{"name":"GPD-C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPDH-C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpd1","type":"exact"}],"termid":"PR:P21696"}


id: GO:1901711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of homoserine biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of homoserine biosynthetic process","termid":"GO:1901710"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"homoserine biosynthetic process","termid":"GO:0009090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of homoserine biosynthetic process","synonyms":[{"name":"down regulation of homoserine anabolism","type":"exact"},{"name":"down regulation of homoserine biosynthesis","type":"exact"},{"name":"down regulation of homoserine biosynthetic process","type":"exact"},{"name":"down regulation of homoserine formation","type":"exact"},{"name":"down regulation of homoserine synthesis","type":"exact"},{"name":"down-regulation of homoserine anabolism","type":"exact"},{"name":"down-regulation of homoserine biosynthesis","type":"exact"},{"name":"down-regulation of homoserine biosynthetic process","type":"exact"},{"name":"down-regulation of homoserine formation","type":"exact"},{"name":"down-regulation of homoserine synthesis","type":"exact"},{"name":"downregulation of homoserine anabolism","type":"exact"},{"name":"downregulation of homoserine biosynthesis","type":"exact"},{"name":"downregulation of homoserine biosynthetic process","type":"exact"},{"name":"downregulation of homoserine formation","type":"exact"},{"name":"downregulation of homoserine synthesis","type":"exact"},{"name":"inhibition of homoserine anabolism","type":"exact"},{"name":"inhibition of homoserine biosynthesis","type":"exact"},{"name":"inhibition of homoserine biosynthetic process","type":"narrow"},{"name":"inhibition of homoserine formation","type":"exact"},{"name":"inhibition of homoserine synthesis","type":"exact"},{"name":"negative regulation of homoserine anabolism","type":"exact"},{"name":"negative regulation of homoserine biosynthesis","type":"exact"},{"name":"negative regulation of homoserine formation","type":"exact"},{"name":"negative regulation of homoserine synthesis","type":"exact"}],"termid":"GO:1901711"}


id: GO:0044538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a cell encompassing the cell cortex, the plasma membrane, and any external encapsulating structures of a host cell.","definition_xrefs":["GOC:jl","PMID:20463076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell periphery","termid":"GO:0044538"}


id: GO:0003011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within involuntary skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Involuntary skeletal muscle is skeletal muscle that is not under conscious control.","definition_xrefs":["GOC:mtg_cardio","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle contraction","termid":"GO:0003009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"involuntary skeletal muscle contraction","termid":"GO:0003011"}


id: PBO:0002875
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.4.1","termid":"PBO:0002875"}


id: PBO:0048252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin and GMAP prepropeptide","termid":"PBO:0048252"}


id: PBO:0017887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase kink, Knk1","termid":"PBO:0017887"}


id: PomGeneEx:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is present at the same level under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constant","termid":"PomGeneEx:0000007"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA level constant","synonyms":[{"name":"RNA expression constant","type":"exact"},{"name":"constant RNA level","type":"exact"}],"termid":"PomGeneEx:0000016"}


id: PBO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R52","termid":"PBO:0000298"}


id: GO:0046112
data:
  {"annotated_genes":["SJAG_01859","SJAG_03164","SJAG_02364","SJAG_00444","SJAG_04354","SJAG_00392","SJAG_01661","SJAG_00779","SJAG_01814","SJAG_03140","SJAG_00694","SJAG_00197","SJAG_00964","SJAG_05024","SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71732,75098,71490,73677,89615,57777,75837,73373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[72523,112337,119366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[75716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[116505,60493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[93830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_04354":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase anabolism","type":"exact"},{"name":"nucleobase biosynthesis","type":"exact"},{"name":"nucleobase formation","type":"exact"},{"name":"nucleobase synthesis","type":"exact"}],"termid":"GO:0046112","terms_by_termid":{"GO:0006168":null,"GO:0006207":null,"GO:0006223":null,"GO:0009113":null,"GO:0046084":null}}


id: GO:0007345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Formation and development of an embryo and its organized structures.","definition_xrefs":["ISBN:0140512888","GOC:ems","ISBN:0070524300"],"gene_count":0,"genotype_count":0,"name":"obsolete embryogenesis and morphogenesis (obsolete GO:0007345)","synonyms":[{"name":"embryogenesis and morphogenesis","type":"exact"}],"termid":"GO:0007345"}


id: PBO:0055281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2708","termid":"PBO:0055281"}


id: PBO:0002850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic serine-tRNA ligase Srs1 (predicted)","termid":"PBO:0002850"}


id: PBO:0067404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 513, pseudogene","termid":"PBO:0067404"}


id: GO:0050410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxododecanoate + H+ = 2-undecanone + CO2. Also decarboxylates other C14 to C16 oxo acids.","definition_xrefs":["RHEA:13385","EC:4.1.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-oxolaurate decarboxylase activity","secondary_identifiers":["MetaCyc:3-OXOLAURATE-DECARBOXYLASE-RXN","KEGG_REACTION:R03747"],"synonyms":[{"name":"3-oxododecanoate carboxy-lyase (2-undecanone-forming)","type":"related"},{"name":"3-oxododecanoate carboxy-lyase activity","type":"related"},{"name":"beta-ketoacyl decarboxylase activity","type":"related"},{"name":"beta-ketolaurate decarboxylase activity","type":"related"}],"termid":"GO:0050410"}


id: PBO:0069028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 273, pseudogene","termid":"PBO:0069028"}


id: PBO:0039058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 7","termid":"PBO:0039058"}


id: PBO:0029498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_elongated_vegetative_cell_population_(obsolete_FYPO:0002217)","termid":"PBO:0029498"}


id: GO:0044638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the positive regulation of complement activation via the classical pathway of the bitten/stung organism.","definition_xrefs":["PMID:20837040","GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of complement activation, classical pathway in another organism (obsolete GO:0044638)","synonyms":[{"name":"envenomation resulting in positive regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044638"}


id: GO:0019550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-glutamate into other compounds, including aspartate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"L-glutamate catabolic process","termid":"GO:0006538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-glutamate catabolic process to aspartate","secondary_identifiers":["MetaCyc:GLUTDEG-PWY"],"synonyms":[{"name":"glutamate breakdown to aspartate","type":"exact"},{"name":"glutamate degradation to aspartate","type":"exact"}],"termid":"GO:0019550"}


id: PATO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's magnitude of or the relationships between its repeated parts lack consistency.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular spatial pattern","termid":"PATO:0000330"}


id: MONDO:0012773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hunter-Macdonald syndrome","secondary_identifiers":["OMIM:611962","UMLS:C2677745","MEDGEN:383181","MESH:C567445"],"synonyms":[{"name":"Hunter-Macdonald syndrome","type":"exact"}],"termid":"MONDO:0012773","xrefs":{"Monarch":{"xref_id":"0012773"}}}


id: PBO:0004144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp16","termid":"PBO:0004144"}


id: GO:1904660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory perception of bitter taste.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:1716172","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of bitter taste","synonyms":[{"name":"regulation of bitter taste perception","type":"exact"}],"termid":"GO:1904660"}


id: PBO:0054130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1496","termid":"PBO:0054130"}


id: MONDO:1011950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondroma causing progressive posterior paresis, non-human animal","secondary_identifiers":["OMIA:000749"],"termid":"MONDO:1011950","xrefs":{"Monarch":{"xref_id":"1011950"}}}


id: PBO:0058349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4722","termid":"PBO:0058349"}


id: PBO:0073819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 20","termid":"PBO:0073819"}


id: MONDO:0005529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete methylmalonic aciduria and homocystinuria type cblG (obsolete MONDO:0005529)","termid":"MONDO:0005529","xrefs":{"Monarch":{"xref_id":"0005529"}}}


id: GO:0120507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the base-exchange of a guanine residue with queuine at the wobble position of the anticodon of tRNAs. The eukaryotic tRNA-guanine transglycosylase exists as a heterodimer of a catalytic subunit (QTRT1 in humans) and an accessory subunit (QTRT2 in humans), whereas the bacterial enzyme is homodimeric.","definition_xrefs":["PMID:38181786","PMID:20354154","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA-guanine transglycosylase complex","synonyms":[{"name":"TGT","type":"exact"},{"name":"queuine tRNA-ribosyltransferase complex","type":"exact"}],"termid":"GO:0120507"}


id: PBO:0001274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn4","termid":"PBO:0001274"}


id: PBO:0048407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated kinase 1A","termid":"PBO:0048407"}


id: GO:0046697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta.","definition_xrefs":["PMID:11133685","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"maternal placenta development","termid":"GO:0001893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"decidualization","secondary_identifiers":["Wikipedia:Decidualization"],"synonyms":[{"name":"decidual cell reaction","type":"exact"}],"termid":"GO:0046697"}


id: GO:0005460
data:
  {"annotated_genes":["SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77782],"is_not":false,"summary":null,"term":"GO:0005460"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucose from one side of a membrane to the other. UDP-glucose is a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"UDP-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005460","terms_by_termid":{"GO:0005460":null}}


id: PBO:0084713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane insertase; mediates the insertion of both mitochondrial- and nuclear-encoded proteins from the matrix into the inner membrane; also has a role in insertion of carrier proteins into the inner membrane; acts as a voltage-gated ion channel, activated by substrate peptides; interacts with mitochondrial ribosomes; conserved from bacteria to animals","termid":"PBO:0084713"}


id: GO:0140976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular processes and signaling pathways by which a cell responds to disruption of the integrity of its plasma membrane by another organism. Some toxins produced by other organisms can form pores in membranes, or affect the membrane permeability.","definition_xrefs":["PMID:21518219","PMID:17234446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host defense response against symbiont-mediated perturbation of plasma membrane integrity","synonyms":[{"name":"defense response against disruption of plasma membrane integrity","type":"exact"},{"name":"defense response against perturbation of plasma membrane integrity","type":"related"}],"termid":"GO:0140976"}


id: PBO:0086647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion","termid":"PBO:0086647"}


id: PBO:0084339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore protein; associated with the essential kinetochore proteins Nnf1p and Spc24p; phosphorylated by Clb5-Cdk1, Mps1p, Ipl1p and to a lesser extent by Clb2-Cdk1; localizes to the lower region of the Ndc80 complex during anaphase and regulates KMN activity by inhibiting the Mtw1 and Spc105 complexes from binding to the Ndc80 complex; similar to metazoan CENP-T","termid":"PBO:0084339"}


id: GO:0015279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A ligand-gated ion channel activity which transports calcium in response to emptying of intracellular calcium stores.","definition_xrefs":["GOC:dph","GOC:tb","PMID:15788710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel activity","termid":"GO:0005262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"store-operated calcium channel activity","secondary_identifiers":["Reactome:R-HSA-434798"],"termid":"GO:0015279"}


id: PBO:0061808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odr-4 GPCR localization factor homolog","termid":"PBO:0061808"}


id: MONDO:0005604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete plasma cell leukemia (obsolete MONDO:0005604)","termid":"MONDO:0005604","xrefs":{"Monarch":{"xref_id":"0005604"}}}


id: FYPO:0002848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T, when the cell population has been in stationary phase and is then placed in conditions that allow recovery.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped vegetative cell","termid":"FYPO:0007379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005568","FYPO:0000002","FYPO:0000004","FYPO:0005447","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"T-shaped cell during recovery from stationary phase","synonyms":[{"name":"T-shaped cell during recovery from stationary phase during mitotic cell cycle","type":"related"},{"name":"T-shaped cell during vegetative growth following stationary phase","type":"exact"}],"termid":"FYPO:0002848"}


id: MONDO:0012920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 6q25.","definition_xrefs":["DOID:0110758","MONDO:patterns/inherited_susceptibility","PMID:19073967"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 21","secondary_identifiers":["OMIM:612521","MESH:C567285","MEDGEN:436543","UMLS:C2675865"],"synonyms":[{"name":"IDDM21","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 21","type":"related"},{"name":"insulin-dependent diabetes mellitus 21","type":"exact"}],"termid":"MONDO:0012920","xrefs":{"Monarch":{"xref_id":"0012920"}}}


id: PBO:0038887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADCYAP receptor type I","termid":"PBO:0038887"}


id: PR:000027629
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated in RxxS motifs by Sid2 family kinases. UniProtKB:Q9P7H1-1, Ser-396/Ser-408/Ser-467/Ser-468/Ser-493/Ser-513, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:16085489","PMID:18951025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clp1/Phos(S396,S408,S467,S468,S493,S513)","pombase_gene_id":"SPAC1782.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: tyrosine-protein phosphatase Clp1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-CDC14/Phos:1","type":"exact"},{"name":"Spom-clp1/Phos:1","type":"exact"},{"name":"clip1p phosphorylated","type":"related"},{"name":"clp1/Phos(S396,S408,S467,S468,S493,S513)","type":"exact"},{"name":"flp1p phosphorylated","type":"related"},{"name":"tyrosine-protein phosphatase CDC14 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000027629"}


id: GO:0021791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the branchial arch mesenchyme is directed to a specific target site in the branchial arch mesenchyme in response to an attractive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph","PMID:14699587","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in branchial arch mesenchyme","termid":"GO:0021789"},{"relation_name":"is_a","term_name":"chemoattraction of branchiomotor axon","termid":"GO:0021792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of branchiomotor neuron axon in branchial arch mesenchyme","synonyms":[{"name":"positive chemotaxis of branchiomotor neuron axon in branchial arch mesenchyme","type":"exact"}],"termid":"GO:0021791"}


id: PBO:0082495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of 1,3-beta-glucan synthase; involved in formation of the inner layer of the spore wall; activity positively regulated by Rho1p and negatively by Smk1p; GSC2 has a paralog, FKS1, that arose from the whole genome duplication","termid":"PBO:0082495"}


id: SO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The first base to be translated into protein.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_start","synonyms":[{"name":"coding start","type":"exact"},{"name":"translation initiation site","type":"exact"},{"name":"translation start","type":"related"}],"termid":"SO:0000323"}


id: GO:0051664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which nuclear pores are transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear pore localization","secondary_identifiers":["GO:0031081"],"synonyms":[{"name":"establishment and maintenance of nuclear pore localization","type":"exact"},{"name":"nuclear pore distribution","type":"related"},{"name":"nuclear pore localisation","type":"exact"},{"name":"positioning of nuclear pores","type":"related"}],"termid":"GO:0051664"}


id: MONDO:0957263
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88396],"is_not":false,"summary":null,"term":"MONDO:0957263"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure syndrome, telomere-related, 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620367","UMLS:C5830496","MEDGEN:1841132"],"termid":"MONDO:0957263","terms_by_termid":{"MONDO:0957263":null},"xrefs":{"Monarch":{"xref_id":"0957263"}}}


id: MONDO:0800345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 17","secondary_identifiers":["MEDGEN:861997","UMLS:C4013560"],"synonyms":[{"name":"ATFB17","type":"exact"}],"termid":"MONDO:0800345","xrefs":{"Monarch":{"xref_id":"0800345"}}}


id: MONDO:1012928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in Rhesus monkey due to a mutation in the APP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, APP-related, Rhesus monkey","secondary_identifiers":["OMIA:002538-9544"],"termid":"MONDO:1012928","xrefs":{"Monarch":{"xref_id":"1012928"}}}


id: GO:0060464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a lung lobe from unspecified parts. This process begins with the specific processes that contribute to the appearance of the lobe and ends when the structural rudiment is recognizable. A lung lobe is a projection that extends from the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"lung lobe morphogenesis","termid":"GO:0060463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung lobe formation","termid":"GO:0060464"}


id: PBO:0068097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 404","termid":"PBO:0068097"}


id: PBO:0070383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rogdi atypical leucine zipper","termid":"PBO:0070383"}


id: SO:0000706
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 3' splice site of the acceptor primary transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_site","termid":"SO:0001420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_acceptor_site","synonyms":[{"name":"3' trans splice site","type":"related"},{"name":"trans splice acceptor site","type":"exact"}],"termid":"SO:0000706"}


id: PBO:0012587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of mRNA decapping Edc3","termid":"PBO:0012587"}


id: GO:1904088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epiboly involved in gastrulation with mouth forming second.","definition_xrefs":["GOC:TermGenie","PMID:24892953","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epiboly involved in gastrulation with mouth forming second","termid":"GO:1904086"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"epiboly involved in gastrulation with mouth forming second","termid":"GO:0055113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epiboly involved in gastrulation with mouth forming second","synonyms":[{"name":"activation of epiboly involved in gastrulation with mouth forming second","type":"narrow"},{"name":"up regulation of epiboly involved in gastrulation with mouth forming second","type":"exact"},{"name":"up-regulation of epiboly involved in gastrulation with mouth forming second","type":"exact"},{"name":"upregulation of epiboly involved in gastrulation with mouth forming second","type":"exact"}],"termid":"GO:1904088"}


id: PBO:0067030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 43, pseudogene","termid":"PBO:0067030"}


id: GO:0043462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate of an ATP-dependent activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ATP-dependent activity","synonyms":[{"name":"regulation of ATPase activity","type":"exact"},{"name":"regulation of adenosinetriphosphatase activity","type":"exact"}],"termid":"GO:0043462"}


id: PBO:0083512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF ERG7/YHR072W","termid":"PBO:0083512"}


id: MONDO:0012132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any colorectal cancer in which the cause of the disease is a mutation in the GALNT12 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 1","secondary_identifiers":["OMIM:608812","UMLS:C1837315","MEDGEN:324734"],"synonyms":[{"name":"CRCS1","type":"related"},{"name":"GALNT12 colorectal cancer","type":"exact"},{"name":"colorectal adenoma and cancer, susceptibility to","type":"related"},{"name":"colorectal cancer caused by mutation in GALNT12","type":"exact"},{"name":"colorectal cancer, susceptibility to, 1","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 9","type":"related"},{"name":"colorectal cancer, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to colorectal cancer 1","type":"related"}],"termid":"MONDO:0012132","xrefs":{"Monarch":{"xref_id":"0012132"}}}


id: GO:0009137
data:
  {"annotated_genes":["SJAG_03903","SJAG_04192","SJAG_04495","SJAG_04048","SJAG_02009","SJAG_00027","SJAG_00461","SJAG_02796","SJAG_01310","SJAG_00685","SJAG_02945","SJAG_05314","SJAG_03828","SJAG_06621","SJAG_04334","SJAG_02107","SJAG_00605","SJAG_03373","SJAG_02785","SJAG_02369","SJAG_06622","SJAG_02135","SJAG_03660","SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111366,107396,111363,111364,96400,74209,111361,111362,100159,111360,107395,107765,111365,118353,105304,105563,79634,99888,107394,107766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[90442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[74861,77929],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[71772],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleoside diphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate catabolic process","termid":"GO:0009134"},{"relation_name":"is_a","term_name":"purine nucleoside diphosphate metabolic process","termid":"GO:0009135"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside diphosphate breakdown","type":"exact"},{"name":"purine nucleoside diphosphate catabolism","type":"exact"},{"name":"purine nucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009137","terms_by_termid":{"GO:0006110":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: MONDO:0018988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iridocorneal endothelial (ICE) syndrome describes a group of progressive corneal proliferative endotheliopathies comprised of Chandler syndrome, Cogan-Reese syndrome and essential iris atrophy, affecting mainly young adult females and characterized by iris holes and atrophy, papillary distortion, anterior synechiae, corneal edema and often with secondary glaucoma and corneal decompensation as complications","definition_xrefs":["Orphanet:64734"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare acquired eye disease (obsolete MONDO:0015120)","termid":"MONDO:0015120"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glaucoma due to a proliferation and differentiation anomaly (obsolete MONDO:0020221)","termid":"MONDO:0020221"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iridocorneal endothelial syndrome","secondary_identifiers":["MedDRA:10053678","UMLS:C1096100","MEDGEN:242751","icd11.foundation:265074385","NCIT:C84792","SCTID:129623003","GARD:60","MESH:D057129"],"synonyms":[{"name":"ICE syndrome","type":"exact"}],"termid":"MONDO:0018988","xrefs":{"Monarch":{"xref_id":"0018988"}}}


id: PBO:0078797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 16-4","termid":"PBO:0078797"}


id: GO:0033767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4'-hydroxyacetophenone + H+ + NADPH + O2 = 4-hydroxyphenyl acetate + H2O + NADP+.","definition_xrefs":["EC:1.14.13.84","RHEA:22916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxyacetophenone monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R06892","UM-BBD_reactionID:r0756","MetaCyc:1.14.13.84-RXN"],"synonyms":[{"name":"(4-hydroxyphenyl)ethan-1-one,NADPH:oxygen oxidoreductase (ester-forming) activity","type":"exact"},{"name":"HAPMO","type":"related"}],"termid":"GO:0033767"}


id: PBO:0091635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm4","termid":"PBO:0091635"}


id: GO:0039542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the rate or extent of K63-linked ubiquitination of RIG-I (also known as DDX58), thereby suppressing RIG-I signal transduction. Lys63-linked ubiquitination of the N-terminal CARD domains of RIG-I is crucial for the cytosolic RIG-I signaling pathway to elicit host antiviral innate immunity.","definition_xrefs":["PMID:19454348","PMID:21890623"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host RIG-I K63-linked ubiquitination (obsolete GO:0039542)","synonyms":[{"name":"inhibition by virus of TRIM25-mediated ubiquitination of host RIG-I","type":"exact"},{"name":"inhibition by virus of host DDX58 K63-linked ubiquitination","type":"exact"},{"name":"inhibition by virus of host RIG-I activity by inhibition of RIG-I ubiquitination","type":"broad"}],"termid":"GO:0039542"}


id: PBO:0013478
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cut Eight supressing Kinase","termid":"PBO:0013478"}


id: PBO:0049485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1-8 pseudogene 1","termid":"PBO:0049485"}


id: MONDO:0019374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CAMOS syndrome is characterized by the association of a non-progressive congenital ataxia, severe intellectual deficit, optic atrophy and structural anomalies of the skin vessels. It has been described in five children from a large consanguineous Lebanese family. Short stature and microcephaly were also reported. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:83472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital cerebellar ataxia","termid":"MONDO:0020043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"CAMOS syndrome","secondary_identifiers":["MEDGEN:1387501","GARD:9977","UMLS:C4511633","SCTID:726031001","OMIM:606937"],"synonyms":[{"name":"CAMOS","type":"related"},{"name":"SCAR5","type":"exact"},{"name":"cerebellar ataxia with intellectual disability optic atrophy and skin abnormalities","type":"related"},{"name":"cerebellar ataxia with mental retardation optic atrophy and skin abnormalities","type":"related"},{"name":"cerebellar ataxia-intellectual disability-optic atrophy-skin abnormalities syndrome","type":"exact"},{"name":"spinocerebellar ataxia autosomal recessive 5","type":"related"}],"termid":"MONDO:0019374","xrefs":{"Monarch":{"xref_id":"0019374"}}}


id: GO:0022871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sorbose(out) = protein histidine + sorbose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["PMID:10613875","GOC:mtg_transport","RHEA:49296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003824","GO:0005215","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sorbose phosphotransferase system transporter activity","secondary_identifiers":["MetaCyc:RXN-15094","EC:2.7.1.206"],"synonyms":[{"name":"sorbose PTS transporter activity","type":"exact"}],"termid":"GO:0022871"}


id: GO:0075088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont G protein-coupled receptor signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont G protein-coupled receptor signal transduction (obsolete GO:0075088)","synonyms":[{"name":"positive regulation by host of symbiont G-protein coupled receptor protein signal transduction","type":"exact"}],"termid":"GO:0075088"}


id: GO:0015951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine ribonucleotide is synthesized from another purine ribonucleotide.","definition_xrefs":["ISBN:0306444747","ISBN:0471394831","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine nucleotide interconversion","termid":"GO:0015950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleotide interconversion","termid":"GO:0015951"}


id: MONDO:1010061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperaldosteronism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperaldosteronism, non-human animal","secondary_identifiers":["OMIA:001269"],"termid":"MONDO:1010061","xrefs":{"Monarch":{"xref_id":"1010061"}}}


id: MONDO:0007610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gingival fibromatosis - hypertrichosis syndrome is a rare autosomal dominant disorder characterized by a generalized enlargement of the gingiva occurring at birth or during childhood that is associated with generalized hypertrichosis developing at birth, during the first years of life, or at puberty and predominantly affecting the face, upper limbs, and midback.","definition_xrefs":["Orphanet:2026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gingival fibromatosis-hypertrichosis syndrome","secondary_identifiers":["MESH:C565016","UMLS:C1851120","GARD:2324","MEDGEN:342675","OMIM:135400","SCTID:716008002"],"synonyms":[{"name":"CGHT","type":"exact"},{"name":"HTC3","type":"related"},{"name":"chromosome 17Q24.2-q24.3 Duplication syndrome","type":"related"},{"name":"chromosome 17Q24.2-q24.3 deletion syndrome","type":"related"},{"name":"congenital generalised hypertrichosis terminalis","type":"exact"},{"name":"congenital generalized hypertrichosis terminalis","type":"exact"},{"name":"extreme hirsutism with gingival fibromatosis","type":"related"},{"name":"fibromatosis, gingival, with hypertrichosis","type":"related"},{"name":"gingival fibromatosis with hypertrichosis","type":"related"},{"name":"hereditary gingival fibromatosis with hypertrichosis","type":"related"},{"name":"hirsutism-congenital gingival hyperplasia syndrome","type":"exact"},{"name":"hypertrichosis terminalis, generalized, with gingival hyperplasia","type":"related"},{"name":"hypertrichosis terminalis, generalized, with or without gingival hyperplasia","type":"related"},{"name":"hypertrichosis with or without gingival hyperplasia","type":"exact"},{"name":"hypertrichosis, congenital generalized, with gingival hyperplasia","type":"exact"},{"name":"hypertrichosis, congenital generalized, with or without gingival hyperplasia","type":"related"},{"name":"microdeletion 17Q24.2-q24.3 syndrome","type":"related"},{"name":"microduplication 17Q24.2-q24.3 syndrome","type":"related"}],"termid":"MONDO:0007610","xrefs":{"Monarch":{"xref_id":"0007610"}}}


id: MONDO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spherocytosis (obsolete MONDO:0000094)","secondary_identifiers":["HP:0004444"],"synonyms":[{"name":"obsolete spherocytosis (disease)","type":"exact"},{"name":"spherocytosis","type":"exact"}],"termid":"MONDO:0000094","xrefs":{"Monarch":{"xref_id":"0000094"}}}


id: PBO:0045294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 46","termid":"PBO:0045294"}


id: MONDO:0003877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical adenoid basal carcinoma (obsolete MONDO:0003877)","termid":"MONDO:0003877","xrefs":{"Monarch":{"xref_id":"0003877"}}}


id: MONDO:0044843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dystonic disorder","termid":"MONDO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"torsion dystonia","secondary_identifiers":["SCTID:431034009","MEDGEN:3941","UMLS:C0013423"],"synonyms":[{"name":"torsion dystonia","type":"exact"}],"termid":"MONDO:0044843","xrefs":{"Monarch":{"xref_id":"0044843"}}}


id: PBO:0039937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 1A","termid":"PBO:0039937"}


id: MONDO:0011982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thyroid disease, susceptibility to","termid":"MONDO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thyroid disease, susceptibility to, 3","secondary_identifiers":["OMIM:608175","UMLS:C1842444","MEDGEN:374932"],"synonyms":[{"name":"AITD3","type":"related"},{"name":"autoimmune thyroid disease, susceptibility to, 3","type":"exact"},{"name":"autoimmune thyroid disease, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0011982","xrefs":{"Monarch":{"xref_id":"0011982"}}}


id: FYECO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which rapamycin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ rapamycin","synonyms":[{"name":"+ sirolimus","type":"exact"}],"termid":"FYECO:0000242"}


id: GO:0010821
data:
  {"annotated_genes":["SJAG_03957","SJAG_01212","SJAG_04203","SJAG_00855","SJAG_03887","SJAG_00304"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91658],"is_not":false,"summary":null,"term":"GO:0010821"},{"annotations":[118307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[108403,103962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[97627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"},{"annotations":[110847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a mitochondrion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00304":null,"SJAG_00855":null,"SJAG_01212":null,"SJAG_03887":null,"SJAG_03957":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"regulation of mitochondrion organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrion organisation","type":"exact"}],"termid":"GO:0010821","terms_by_termid":{"GO:0010637":null,"GO:0010821":null,"GO:0090141":null,"GO:0090258":null,"GO:0090297":null}}


id: PBO:0067976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 278","termid":"PBO:0067976"}


id: GO:0103075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(indol-3-yl)pyruvate + NADPH + O2 + H+ = indole-3-acetate + carbon dioxide + NADP + H2O.","definition_xrefs":["EC:1.14.13.168","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"indole-3-pyruvate monooxygenase activity","secondary_identifiers":["RHEA:34331","MetaCyc:RXNDQC-2"],"termid":"GO:0103075"}


id: GO:0032931
data:
  {"annotated_genes":["SJAG_01204"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74356],"is_not":false,"summary":null,"term":"GO:0032931"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 56) = CoA + histone H3 N6-acetyl-L-lysine (position 56).","definition_xrefs":["PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01204":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140096","GO:0034212","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"histone H3K56 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"histone H3-K56 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K56 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K56 specific)","type":"exact"}],"termid":"GO:0032931","terms_by_termid":{"GO:0032931":null}}


