# terms

id: GO:0060746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive behavior in which a parent cares for and rears offspring.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive behavior","termid":"GO:0019098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parental behavior","termid":"GO:0060746"}


id: PBO:0074816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 16","termid":"PBO:0074816"}


id: PBO:0091729
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi Five-dependent Recombination mediator","termid":"PBO:0091729"}


id: GO:0032055
data:
  {"annotated_genes":["SJAG_02592","SJAG_00690","SJAG_00169","SJAG_00786","SJAG_03869","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96233,71696,77025,111644,117620,101232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translation in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of translation in response to stress","type":"exact"},{"name":"down-regulation of translation in response to stress","type":"exact"},{"name":"downregulation of translation in response to stress","type":"exact"},{"name":"inhibition of translation in response to stress","type":"narrow"}],"termid":"GO:0032055","terms_by_termid":{"GO:1990625":null}}


id: PBO:0002678
data:
  {"annotated_genes":["SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"EC numbers":[{"annotations":[56271],"is_not":false,"summary":null,"term":"PBO:0002678"}]},"cv_name":"EC numbers","gene_count":1,"genes_by_uniquename":{"SJAG_MIT03":null},"genotype_count":0,"is_obsolete":false,"name":"1.10.2.2","termid":"PBO:0002678","terms_by_termid":{"PBO:0002678":null}}


id: FYPO:0000272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell fails to form a septum.","definition_xrefs":["PomBase:mah","PMID:9649519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"},{"relation_name":"is_a","term_name":"abolished cytokinesis","termid":"FYPO:0000417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"abolished septum assembly","synonyms":[{"name":"abolished division septum assembly","type":"exact"},{"name":"abolished septation","type":"broad"},{"name":"abolished septum assembly during mitotic cell cycle","type":"related"},{"name":"abolished septum formation","type":"exact"},{"name":"septum assembly abolished","type":"exact"},{"name":"septum assembly abolished during vegetative growth","type":"exact"},{"name":"septum formation: absent","type":"related"},{"name":"septum initiation defective","type":"related"}],"termid":"FYPO:0000272"}


id: GO:0006235
data:
  {"annotated_genes":["SJAG_04627","SJAG_04665","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70221,72800,94299],"is_not":false,"summary":null,"term":"GO:0006235"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dTTP, deoxyribosylthymine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009212"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dTTP metabolic process","termid":"GO:0046075"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dTTP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"dTTP anabolism","type":"exact"},{"name":"dTTP biosynthesis","type":"exact"},{"name":"dTTP formation","type":"exact"},{"name":"dTTP synthesis","type":"exact"}],"termid":"GO:0006235","terms_by_termid":{"GO:0006235":null}}


id: PBO:0116708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily H member 1 pseudogene (gene/pseudogene)","termid":"PBO:0116708"}


id: PBO:0070155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 69 pseudogene","termid":"PBO:0070155"}


id: PBO:0091828
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Increased Maximal permissive temperature for Pim1","termid":"PBO:0091828"}


id: PBO:0089758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp5","termid":"PBO:0089758"}


id: GO:0047458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-acetyl-L-serine + pyrazole = 3-(pyrazol-1-yl)-L-alanine + acetate + H+.","definition_xrefs":["RHEA:13117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"beta-pyrazolylalanine synthase activity","secondary_identifiers":["MetaCyc:2.5.1.51-RXN","KEGG_REACTION:R03134","EC:2.5.1.51"],"synonyms":[{"name":"3-O-acetyl-L-serine:pyrazole 1-(2-amino-2-carboxyethyl)transferase activity","type":"related"},{"name":"BPA-synthase activity","type":"related"},{"name":"O(3)-acetyl-L-serine acetate-lyase (adding pyrazole) activity","type":"related"},{"name":"O3-acetyl-L-serine acetate-lyase (adding pyrazole)","type":"related"},{"name":"O3-acetyl-L-serine:pyrazole 1-(2-amino-2-carboxyethyl)transferase activity","type":"related"},{"name":"beta-(1-pyrazolyl)alanine synthase activity","type":"related"},{"name":"beta-pyrazolealanine synthase activity","type":"related"},{"name":"beta-pyrazolylalanine synthase (acetylserine) activity","type":"exact"},{"name":"pyrazolealanine synthase activity","type":"related"},{"name":"pyrazolylalaninase activity","type":"related"}],"termid":"GO:0047458"}


id: MONDO:0017889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucinous tubular and spindle cell renal carcinoma (obsolete MONDO:0017889)","termid":"MONDO:0017889","xrefs":{"Monarch":{"xref_id":"0017889"}}}


id: GO:0015433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptide antigen(in) + ATP = peptide antigen(out) + ADP + phosphate.","definition_xrefs":["TC:3.A.1.209.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type peptide transporter activity","termid":"GO:0015440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type peptide antigen transporter activity","secondary_identifiers":["MetaCyc:3.6.3.43-RXN","Reactome:R-HSA-983144","RHEA:65972","EC:7.4.2.14","Reactome:R-HSA-1236949"],"synonyms":[{"name":"ATP-dependent peptide antigen transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled peptide antigen transmembrane transporter activity","type":"related"},{"name":"major histocompatibility peptide transporter activity","type":"exact"},{"name":"peptide antigen ABC transporter","type":"narrow"},{"name":"peptide antigen transporter activity","type":"broad"},{"name":"peptide antigen-transporting ATPase activity","type":"exact"}],"termid":"GO:0015433"}


id: MONDO:0016227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary episodic ataxia (EA) represents a group of neurological disorders characterized by recurrent episodes of ataxia and vertigo which may be progressive. Weakness, dystonia and ataxia are sometimes present in the interictal period. Seven types of EA have been described to date (EA type 1 to EA type 7), but most of the reported cases belong to EA1 and EA2.","definition_xrefs":["Orphanet:211062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary episodic ataxia","secondary_identifiers":["MEDGEN:314033","GARD:20457","OMIMPS:160120","icd11.foundation:423095680","DOID:963","SCTID:421455009","UMLS:C1720189"],"synonyms":[{"name":"Isaacs syndrome","type":"related"},{"name":"ea syndrome","type":"related"},{"name":"episodic ataxia","type":"exact"},{"name":"episodic ataxia syndrome","type":"related"}],"termid":"MONDO:0016227","xrefs":{"Monarch":{"xref_id":"0016227"}}}


id: GO:0033557
data:
  {"annotated_genes":["SJAG_05237","SJAG_05180"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61047,67761],"is_not":false,"summary":null,"term":"GO:0033557"}]},"cv_name":"cellular_component","definition":"A heterodimeric protein complex that possesses an endonuclease activity that specifically cleaves certain types of branched DNA structures; because such structures often form during the replication ribosomal DNA (rDNA) repeats, the complex plays a role in the maintenance of rDNA. The subunits are known as Slx1 and Slx 4 in budding and fission yeasts, and are conserved in eukaryotes.","definition_xrefs":["PMID:16467377","PMID:14528010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":2,"genes_by_uniquename":{"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Slx1-Slx4 complex","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0033557","terms_by_termid":{"GO:0033557":null}}


id: GO:1905459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","GO_REF:0000058","GOC:TermGenie","PMID:26493107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell apoptotic process","termid":"GO:0034391"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell apoptotic process","termid":"GO:1905288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"regulation of VSMC apoptosis","type":"narrow"},{"name":"regulation of VSMC apoptotic process","type":"exact"},{"name":"regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"regulation of vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905459"}


id: RO:0002427
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of causally upstream of or within","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"RO:0002501"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_downstream_of_or_within","termid":"RO:0002427"}


id: PBO:0052705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 6","termid":"PBO:0052705"}


id: GO:0032939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"part_of","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation in response to oxidative stress","synonyms":[{"name":"activation of translation in response to oxidative stress","type":"narrow"},{"name":"stimulation of translation in response to oxidative stress","type":"narrow"},{"name":"up regulation of translation in response to oxidative stress","type":"exact"},{"name":"up-regulation of translation in response to oxidative stress","type":"exact"},{"name":"upregulation of translation in response to oxidative stress","type":"exact"}],"termid":"GO:0032939"}


id: PBO:0067326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 417, pseudogene","termid":"PBO:0067326"}


id: PBO:0056366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 3","termid":"PBO:0056366"}


id: PBO:0049718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 4","termid":"PBO:0049718"}


id: PBO:0088177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zeta subunit of the coatomer complex (COPI); COPI coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER","termid":"PBO:0088177"}


id: MONDO:0017032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary interstitial lung disease in childhood and adulthood due to alveolar structure disorder (obsolete MONDO:0017032)","secondary_identifiers":["Orphanet:264930"],"synonyms":[{"name":"primary ILD in childhood and adulthood due to alveolar structure disorder","type":"exact"}],"termid":"MONDO:0017032","xrefs":{"Monarch":{"xref_id":"0017032"}}}


id: GO:0061521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a hepatic stellate cell.","definition_xrefs":["GOC:dph","PMID:9407545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic stellate cell differentiation","termid":"GO:0061521"}


id: MONDO:0009380
data:
  {"annotated_genes":["SJAG_05213","SJAG_01344","SJAG_03785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87140,87141,87142],"is_not":false,"summary":null,"term":"MONDO:0009380"}]},"cv_name":"mondo","definition":"Dubin-Johnson syndrome (DJS) is a benign, inherited liver disorder characterized clinically by chronic, predominantly conjugated, hyperbilirubinemia and histopathologically by black-brown pigment deposition in parenchymal liver cells.","definition_xrefs":["Orphanet:234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary hyperbilirubinemia","termid":"MONDO:0002408"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Dubin-Johnson syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:12308","MedDRA:10013800","MEDGEN:7181","NCIT:C34741","NORD:1063","SCTID:44553005","GARD:2793","icd11.foundation:1691610999","UMLS:C0022350","OMIM:237500","MESH:D007566"],"synonyms":[{"name":"DJS","type":"related"},{"name":"Dubin Johnson Syndrome","type":"exact"},{"name":"Dubin Johnson syndrome","type":"exact"},{"name":"Dubin-Johnson syndrome","type":"exact"},{"name":"Dubin-Sprinz disease","type":"exact"},{"name":"Sprinz-Nelson syndrome","type":"exact"},{"name":"chronic idiopathic jaundice","type":"exact"},{"name":"conjugated hyperbilirubinemia","type":"related"},{"name":"hyperbilirubinemia 2","type":"related"},{"name":"hyperbilirubinemia type 2","type":"exact"},{"name":"hyperbilirubinemia, Dubin-Johnson type","type":"related"}],"termid":"MONDO:0009380","terms_by_termid":{"MONDO:0009380":null},"xrefs":{"Monarch":{"xref_id":"0009380"}}}


id: MONDO:1010314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Van den Ende-Gupta syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita, non-human animal","termid":"MONDO:1011455"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Van den Ende-Gupta syndrome, non-human animal","secondary_identifiers":["OMIA:002016"],"termid":"MONDO:1010314","xrefs":{"Monarch":{"xref_id":"1010314"}}}


id: MONDO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral nerve lesion that involves the common fibular nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lesion of sciatic nerve","termid":"MONDO:0001543"},{"relation_name":"is_a","term_name":"mononeuritis of lower limb","termid":"MONDO:0004797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"common peroneal nerve lesion","secondary_identifiers":["MEDGEN:543054","SCTID:399107008","DOID:12527","ICD9:355.3","UMLS:C0270909"],"synonyms":[{"name":"common fibular nerve peripheral nerve lesion","type":"exact"},{"name":"peripheral nerve lesion of common fibular nerve","type":"exact"}],"termid":"MONDO:0001542","xrefs":{"Monarch":{"xref_id":"0001542"}}}


id: PBO:0061714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT midline carcinoma family member 1","termid":"PBO:0061714"}


id: GO:0031609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two inner rings of the cytosolic proteasome core complex.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, beta-subunit complex","termid":"GO:0019774"},{"relation_name":"part_of","term_name":"cytosolic proteasome core complex","termid":"GO:0031603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cytosolic proteasome core complex, beta-subunit complex","termid":"GO:0031609"}


id: PBO:0078364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 8-2","termid":"PBO:0078364"}


id: MONDO:0850231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A panniculitis that is characterized by sudden onset of painful, erythematous, subcutaneous nodules mainly localized to the pretibial areas. Lesions are usually bilateral and symmetrical, ranging from 1 to 5 cm in diameter.","definition_xrefs":["DOID:0080750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panniculitis","termid":"MONDO:0006591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythema nodosum","secondary_identifiers":["icd11.foundation:1628519266","MEDGEN:41858","UMLS:C0014743"],"termid":"MONDO:0850231","xrefs":{"Monarch":{"xref_id":"0850231"}}}


id: PBO:0089169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop4","termid":"PBO:0089169"}


id: PBO:0031764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_during_vegetative_growth","termid":"PBO:0031764"}


id: GO:0102442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + syringetin = 3,3',5'-O-trimethylmyricetin + H(+) + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"syringetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13920"],"termid":"GO:0102442"}


id: GO:1990662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a S100A9 dimer and capable of binding to toll-like receptor 4 (TLR4) and the receptor for advanced glycation end products (RAGE) initiating signal transduction through NF-kappa-B pathways. Transports arachidonic acid between the cytosol and the NADPH oxidase complex at the plasma membrane in neutrophils as part of an inflammatory signal cascade leading to an oxidative burst. Complexes with microtubules to increase cell motility.","definition_xrefs":["GOC:bhm","PMID:15642721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"S100A9 complex","synonyms":[{"name":"S100A9 homodimer","type":"exact"}],"termid":"GO:1990662"}


id: MONDO:0000885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cloacal exstrophy (obsolete MONDO:0000885)","termid":"MONDO:0000885","xrefs":{"Monarch":{"xref_id":"0000885"}}}


id: PBO:0087411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (17 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification, similar to histone H3","termid":"PBO:0087411"}


id: GO:0098630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering together of unicellular organisms in suspension form aggregates.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell aggregation","termid":"GO:0098743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aggregation of unicellular organisms","synonyms":[{"name":"aggregation of single cell organisms","type":"exact"}],"termid":"GO:0098630"}


id: PBO:0041008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BORCS8-MEF2B readthrough","termid":"PBO:0041008"}


id: PBO:0049096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 153","termid":"PBO:0049096"}


id: PBO:0051817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 2","termid":"PBO:0051817"}


id: MONDO:0002824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cardiomyopathy that is not due to abnormalities in heart muscle cells.","definition_xrefs":["Wikipedia:Cardiomyopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"extrinsic cardiomyopathy","secondary_identifiers":["SCTID:195029002","ICD9:425.8","UMLS:C1689817","MEDGEN:739084","DOID:3978"],"synonyms":[{"name":"secondary cardiomyopathy","type":"exact"}],"termid":"MONDO:0002824","xrefs":{"Monarch":{"xref_id":"0002824"}}}


id: GO:0000244
data:
  {"annotated_genes":["SJAG_03214","SJAG_00414","SJAG_02915","SJAG_00278","SJAG_04529","SJAG_04497","SJAG_01547","SJAG_00643"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64156,74354,77835,79450,107431,108500,114236,116387],"is_not":false,"summary":null,"term":"GO:0000244"}]},"cv_name":"biological_process","definition":"The formation of a tri-snRNP complex containing U4 and U6 (or U4atac and U6atac) snRNAs and U5 snRNAs and associated proteins. This includes reannealing of U4 and U6 (or U4atac and U6atac) snRNAs released from previous rounds of splicing to reform the U4/U6 snRNP (or U4atac/U6atac snRNP) as well as the subsequent association of the U5 snRNP with the U4/U6 snRNP (or U4atac/U6atac snRNP) to form a tri-snRNP that is ready to reassemble into another spliceosome complex.","definition_xrefs":["PMID:9452384","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP assembly","termid":"GO:0000387"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00278":null,"SJAG_00414":null,"SJAG_00643":null,"SJAG_01547":null,"SJAG_02915":null,"SJAG_03214":null,"SJAG_04497":null,"SJAG_04529":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"spliceosomal tri-snRNP complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000355","GO:0000351"],"synonyms":[{"name":"assembly of spliceosomal tri-snRNP","type":"exact"},{"name":"assembly of spliceosomal tri-snRNP U4/U6.U5","type":"narrow"},{"name":"assembly of spliceosomal tri-snRNP U4atac/U6atac.U5","type":"narrow"},{"name":"snRNP recycling","type":"broad"},{"name":"spliceosomal tri-snRNP U4/U6.U5 assembly","type":"narrow"},{"name":"spliceosomal tri-snRNP U4atac/U6atac.U5 assembly","type":"narrow"},{"name":"spliceosomal tri-snRNP assembly","type":"exact"}],"termid":"GO:0000244","terms_by_termid":{"GO:0000244":null}}


id: PBO:0027957
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pyridoxine:NADP_4-dehydrogenase_activity","termid":"PBO:0027957"}


id: MONDO:0012101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile open angle glaucoma","termid":"MONDO:0020367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 1, open angle, J","secondary_identifiers":["GARD:18228","MEDGEN:324818","MESH:C563874","OMIM:608695","UMLS:C1837528"],"synonyms":[{"name":"GLC1J","type":"exact"},{"name":"JOAG1J","type":"exact"},{"name":"JOAG2","type":"exact"},{"name":"glaucoma 1, open angle, J","type":"exact"},{"name":"glaucoma, primary open angle, juvenile-onset, 2","type":"related"}],"termid":"MONDO:0012101","xrefs":{"Monarch":{"xref_id":"0012101"}}}


id: GO:0009937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gibberellic acid mediated signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of gibberellic acid mediated signaling pathway","synonyms":[{"name":"regulation of gibberellic acid mediated signalling","type":"exact"}],"termid":"GO:0009937"}


id: GO:0070218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of sulfide ions within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfide ion homeostasis (obsolete GO:0070218)","synonyms":[{"name":"sulfide generation","type":"related"},{"name":"sulfide homeostasis","type":"exact"},{"name":"sulfide production","type":"related"},{"name":"sulphide generation","type":"related"},{"name":"sulphide homeostasis","type":"exact"},{"name":"sulphide ion homeostasis","type":"exact"},{"name":"sulphide production","type":"related"}],"termid":"GO:0070218"}


id: PBO:0065142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin releasing hormone","termid":"PBO:0065142"}


id: SO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An indel that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indel_artifact","synonyms":[{"name":"indel artifact","type":"exact"}],"termid":"SO:0002173"}


id: GO:0051514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of monopolar cell growth, polarized growth from one end of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of unidimensional cell growth","termid":"GO:0051511"},{"relation_name":"is_a","term_name":"regulation of monopolar cell growth","termid":"GO:0051513"},{"relation_name":"negatively_regulates","term_name":"monopolar cell growth","termid":"GO:0042814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monopolar cell growth","synonyms":[{"name":"down regulation of monopolar cell growth","type":"exact"},{"name":"down-regulation of monopolar cell growth","type":"exact"},{"name":"downregulation of monopolar cell growth","type":"exact"},{"name":"inhibition of monopolar cell growth","type":"narrow"}],"termid":"GO:0051514"}


id: GO:1903566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cilium.","definition_xrefs":["GOC:krc","PMID:22072986","GOC:TermGenie","GO_REF:0000058","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cilium","termid":"GO:1903564"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cilium","synonyms":[{"name":"activation of protein localization to cilium","type":"narrow"},{"name":"up regulation of protein localization to cilium","type":"exact"},{"name":"up-regulation of protein localization to cilium","type":"exact"},{"name":"upregulation of protein localization to cilium","type":"exact"}],"termid":"GO:1903566"}


id: MONDO:0016745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diffuse leptomeningeal melanocytosis is a rare tumor of meninges arising from leptomeningeal melanocytes, characterized by diffuse infiltration of the leptomeninges (pia mater and arachnoidea) anywhere in the central nervous system. Clinical features may include stillbirth, intracranial hypertension and hydrocephalus, seizure, ataxia, syringomyelia, cranial nerve palsy, intracranial hemorrhage, sphincter dysfunction and neuropsychiatric symptoms. Transformation into malignant melanoma of the central nervous system was reported. It may be associated with congenital nevi, as a part of neurocutaneous melanosis.","definition_xrefs":["Orphanet:252031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of meninges","termid":"MONDO:0016743"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse leptomeningeal melanocytosis","secondary_identifiers":["MEDGEN:1651380","UMLS:C4749348","GARD:20739"],"synonyms":[{"name":"DLM","type":"exact"},{"name":"leptomeningeal melanomatosis","type":"broad"}],"termid":"MONDO:0016745","xrefs":{"Monarch":{"xref_id":"0016745"}}}


id: PBO:0072174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 1","termid":"PBO:0072174"}


id: GO:0042001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotypes in a hermaphroditic organism's soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic sex determination","termid":"GO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hermaphrodite somatic sex determination","secondary_identifiers":["GO:0042002"],"termid":"GO:0042001"}


id: PR:P30776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A double-strand-break repair protein rad21 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12585:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin subunit rad21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.17c","secondary_identifiers":["UniProtKB:P30776"],"synonyms":[{"name":"SCC1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC338.17c","type":"related"},{"name":"Spom972h-RAD21","type":"exact"},{"name":"double-strand-break repair protein rad21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30776"}


id: GO:0000339
data:
  {"annotated_genes":["SJAG_00507","SJAG_01625","SJAG_01064","SJAG_04360","SJAG_01830","SJAG_05010","SJAG_03223"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72196],"is_not":false,"summary":null,"term":"GO:0000339"},{"annotations":[93414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098808"},{"annotations":[81429,101676,75994,66636,76584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000340"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine (m7G) group or derivative located at the 5' end of an RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01064":null,"SJAG_01625":null,"SJAG_01830":null,"SJAG_03223":null,"SJAG_04360":null,"SJAG_05010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA cap binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"binding to mRNA cap","type":"narrow"},{"name":"mRNA cap binding","type":"narrow"},{"name":"snRNA cap binding","type":"narrow"}],"termid":"GO:0000339","terms_by_termid":{"GO:0000339":null,"GO:0000340":null,"GO:0098808":null}}


id: FYPO:0001596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which amino acid import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal amino acid import","synonyms":[{"name":"normal amino acid import across plasma membrane","type":"exact"},{"name":"normal amino acid import during mitotic cell cycle","type":"related"},{"name":"normal amino acid import during vegetative growth","type":"exact"},{"name":"normal amino acid import into cell","type":"exact"},{"name":"normal amino acid uptake","type":"exact"}],"termid":"FYPO:0001596"}


id: MONDO:0018697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 1","termid":"MONDO:0016883"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1p35.2 microdeletion syndrome","secondary_identifiers":["GARD:21898","MEDGEN:1807819","Orphanet:456298","UMLS:C5679992"],"synonyms":[{"name":"Del(1)(p35.2)","type":"exact"},{"name":"deletion 1p35.2","type":"exact"},{"name":"monosomy 1p35.2","type":"exact"}],"termid":"MONDO:0018697","xrefs":{"Monarch":{"xref_id":"0018697"}}}


id: PBO:0031004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_dodecyl_sulfate","termid":"PBO:0031004"}


id: PBO:0004558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase family (predicted)","termid":"PBO:0004558"}


id: MONDO:1012487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"zinc deficiency-like syndrome, non-human animal","termid":"MONDO:1011758"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc deficiency-like syndrome, cattle","secondary_identifiers":["OMIA:001935-9913"],"termid":"MONDO:1012487","xrefs":{"Monarch":{"xref_id":"1012487"}}}


id: GO:0030973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a molybdate ion (MoO4 2-).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"molybdate ion binding","synonyms":[{"name":"MoO4 ion binding","type":"exact"}],"termid":"GO:0030973"}


id: PR:P53693
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rds1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P53693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rds1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.12","synonyms":[{"name":"Spom972h-rds1","type":"exact"}],"termid":"PR:P53693"}


id: GO:0015832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete holin (obsolete GO:0015832)","synonyms":[{"name":"holin","type":"exact"}],"termid":"GO:0015832"}


id: MONDO:0042964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of Machado-Joseph disease characterized by Parkinsonian symptoms that respond particularly well to levodopa treatment.","definition_xrefs":["Wikipedia:Machado–Joseph_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Machado-Joseph disease","termid":"MONDO:0007182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Machado-Joseph disease type 4","secondary_identifiers":["SCTID:91956006","MEDGEN:673233","UMLS:C0686352","ICD9:334.3"],"synonyms":[{"name":"azorean disease, type iv","type":"exact"}],"termid":"MONDO:0042964","xrefs":{"Monarch":{"xref_id":"0042964"}}}


id: PBO:0027737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_actomyosin_contractile_ring_during_mitotic_anaphase","termid":"PBO:0027737"}


id: PBO:0054724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2133","termid":"PBO:0054724"}


id: PBO:0046073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit M","termid":"PBO:0046073"}


id: GO:1904893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor signaling via STAT.","definition_xrefs":["GO_REF:0000058","GOC:rjd","GOC:TermGenie","PMID:24587195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via STAT","termid":"GO:1904892"},{"relation_name":"negatively_regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of receptor signaling pathway via STAT","synonyms":[{"name":"down regulation of STAT cascade","type":"exact"},{"name":"down regulation of STAT signalling pathway","type":"exact"},{"name":"down regulation of kinase activated-STAT cascade","type":"exact"},{"name":"down regulation of kinase-STAT cascade","type":"exact"},{"name":"down-regulation of STAT cascade","type":"exact"},{"name":"down-regulation of STAT signalling pathway","type":"exact"},{"name":"down-regulation of kinase activated-STAT cascade","type":"exact"},{"name":"down-regulation of kinase-STAT cascade","type":"exact"},{"name":"downregulation of STAT cascade","type":"exact"},{"name":"downregulation of STAT signalling pathway","type":"exact"},{"name":"downregulation of kinase activated-STAT cascade","type":"exact"},{"name":"downregulation of kinase-STAT cascade","type":"exact"},{"name":"inhibition of STAT cascade","type":"narrow"},{"name":"inhibition of STAT signalling pathway","type":"narrow"},{"name":"inhibition of kinase activated-STAT cascade","type":"narrow"},{"name":"inhibition of kinase-STAT cascade","type":"narrow"},{"name":"negative regulation of STAT signalling pathway","type":"exact"},{"name":"negative regulation of kinase activated-STAT cascade","type":"exact"},{"name":"negative regulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904893"}


id: PBO:0031315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_valproic_acid","termid":"PBO:0031315"}


id: GO:0007244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of mating pheromone signal, as described in Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade (mating sensu Saccharomyces) (obsolete GO:0007244)","synonyms":[{"name":"MAPKKK cascade (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007244"}


id: PBO:0066500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raftlin, lipid raft linker 1 pseudogene 1","termid":"PBO:0066500"}


id: GO:0070896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transposon integration, a process in which a transposable element is incorporated into another DNA molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposon integration (obsolete GO:0070896)","synonyms":[{"name":"activation of transposon integration","type":"narrow"},{"name":"stimulation of transposon integration","type":"narrow"},{"name":"up regulation of transposon integration","type":"exact"},{"name":"up-regulation of transposon integration","type":"exact"},{"name":"upregulation of transposon integration","type":"exact"}],"termid":"GO:0070896"}


id: GO:0090397
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant cell papilla that is part of a stigma papilla cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant cell papilla","termid":"GO:0090395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stigma papilla","termid":"GO:0090397"}


id: PBO:0041691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin receptor","termid":"PBO:0041691"}


id: GO:0015945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methanol, CH3-OH, a colorless, flammable, mobile, poisonous liquid, widely used as a solvent.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methanol metabolic process","synonyms":[{"name":"methanol metabolism","type":"exact"}],"termid":"GO:0015945"}


id: PBO:0072509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 38","termid":"PBO:0072509"}


id: PBO:0082001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 2","termid":"PBO:0082001"}


id: PBO:0089345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]-synthase condensing enzyme Cem1","termid":"PBO:0089345"}


id: FYPO:0003215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another is normal (i.e. indistinguishable from wild type) during a cellular response to hydrogen peroxide. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal protein-protein interaction during cellular response to hydrogen peroxide","synonyms":[{"name":"normal protein binding during cellular response to hydrogen peroxide","type":"exact"},{"name":"normal protein-protein interaction during cellular response to H2O2","type":"exact"}],"termid":"FYPO:0003215"}


id: PBO:0056361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 4","termid":"PBO:0056361"}


id: GO:0062211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The the regeneration process by which a damaged or lost root regrows or re-differentiates. This process may occur via de-differentiation and subsequent reprogramming of somatic cells or activation of existing undifferentiated (meristematic) cells to form a new root meristem and subsequently new root.","definition_xrefs":["PMID:27143753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root regeneration","termid":"GO:0062211"}


id: GO:0004243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal octapeptide as second stage of processing of some proteins imported in the mitochondrion.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial intermediate peptidase activity (obsolete GO:0004243)","synonyms":[{"name":"MIP","type":"broad"},{"name":"mitochondrial intermediate peptidase activity","type":"exact"},{"name":"mitochondrial intermediate precursor-processing proteinase activity","type":"related"}],"termid":"GO:0004243"}


id: PBO:0046127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4 gamma 1","termid":"PBO:0046127"}


id: PR:Q9P7N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 41 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12616:SF0","OMA:SCHPO00654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.05c","secondary_identifiers":["UniProtKB:Q9P7N3"],"synonyms":[{"name":"Spom972h-VPS41","type":"exact"}],"termid":"PR:Q9P7N3"}


id: FYPO:0004962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:12419251","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin at replication origin","synonyms":[{"name":"normal protein localisation to chromatin at replication origin","type":"exact"},{"name":"normal protein localization to chromatin at replication origin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at replication origin during vegetative growth","type":"exact"}],"termid":"FYPO:0004962"}


id: PBO:0012599
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAD16","termid":"PBO:0012599"}


id: PBO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-b (predicted)","termid":"PBO:0002372"}


id: PBO:0088665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA type, iron-sensing Fep1","termid":"PBO:0088665"}


id: GO:0043293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit protein complex involved in the signaling phase of the apoptotic process. In mammals it is typically composed of seven Apaf-1 subunits bound to cytochrome c and caspase-9. A similar complex to promote apoptosis is formed from homologous gene products in other eukaryotic organisms.","definition_xrefs":["PMID:15189137","GOC:mtg_apoptosis","PMID:12176339","PMID:11406413","PMID:10428850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"apoptosome","secondary_identifiers":["Wikipedia:Apoptosome"],"termid":"GO:0043293"}


id: FYPO:0005636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein from kinetochores to the spindle begins later than normal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:21920317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to spindle during meiosis I","termid":"FYPO:0005635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein localization from kinetochore to spindle during meiosis I","synonyms":[{"name":"delayed onset of protein localisation from kinetochore to spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization from kinetochore to meiosis I spindle","type":"exact"},{"name":"delayed onset of protein localization from kinetochore to meiotic spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization from kinetochore to spindle during first meiotic nuclear division","type":"exact"},{"name":"delayed onset of protein movement from kinetochore to spindle during meiosis I","type":"related"},{"name":"delayed protein localization from kinetochore to spindle during meiosis I","type":"exact"},{"name":"delayed protein localization to meiotic spindle from kinetochore during meiosis I","type":"exact"}],"termid":"FYPO:0005636"}


id: PBO:0045859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 49","termid":"PBO:0045859"}


id: GO:0007350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hierarchical steps resulting in the progressive subdivision of the anterior/posterior axis of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastoderm segmentation","termid":"GO:0007350"}


id: MONDO:0019170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyarteritis nodosa (PAN) is a rare, clinically heterogeneous, rheumatologic disease characterized by necrotizing inflammatory lesions affecting small- and medium-sized blood vessels. PAN most commonly affects skin, joints, peripheral nerves, the gut, and the kidney.","definition_xrefs":["Orphanet:767"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic inflammatory disease associated with an acquired peripheral neuropathy (obsolete MONDO:0016177)","termid":"MONDO:0016177"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarteritis nodosa","secondary_identifiers":["DOID:9810","MESH:D010488","GARD:7360","NORD:1588","SCTID:155441006","ICD10CM:M30.0","MedDRA:10036024","icd11.foundation:1419332129","NANDO:1200261","NANDO:2200425","UMLS:C0031036","ICD9:446.0","NCIT:C26847","MEDGEN:14681"],"synonyms":[{"name":"Küssmaul-Maier disease","type":"exact"},{"name":"PAN","type":"exact"},{"name":"classic polyarteritis nodosa","type":"exact"},{"name":"classical polyarteritis nodosa","type":"exact"},{"name":"panarteritis nodosa","type":"exact"},{"name":"periarteritis","type":"related"},{"name":"periarteritis nodosa","type":"exact"},{"name":"polyarteritis","type":"related"},{"name":"polyarteritis nodosa","type":"exact"}],"termid":"MONDO:0019170","xrefs":{"Monarch":{"xref_id":"0019170"}}}


id: PBO:0045402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 4","termid":"PBO:0045402"}


id: SO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["SO:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_acetylation_site","synonyms":[{"name":"H3K27 acetylation site","type":"exact"},{"name":"H3K27ac","type":"exact"}],"termid":"SO:0002049"}


id: PBO:0055282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2709","termid":"PBO:0055282"}


id: GO:0035886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a vascular smooth muscle cell.","definition_xrefs":["GOC:sl","PMID:16151017","PMID:18267954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell differentiation","synonyms":[{"name":"VSMC differentiation","type":"exact"},{"name":"vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:0035886"}


id: PBO:0074227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 46 member 1","termid":"PBO:0074227"}


id: PBO:0048353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 64","termid":"PBO:0048353"}


id: PBO:0072497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 26","termid":"PBO:0072497"}


id: GO:0003291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structure of an atrial septum intermedium is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum morphogenesis","termid":"GO:0060413"},{"relation_name":"part_of","term_name":"atrial septum intermedium development","termid":"GO:0003286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum intermedium morphogenesis","termid":"GO:0003291"}


id: SO:0001232
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified RNA base in which thymine is bound to the ribose ring.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribothymidine","termid":"SO:0001232"}


id: MONDO:0010765
data:
  {"annotated_genes":["SJAG_03077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"}]},"cv_name":"mondo","definition":"46,XY complete gonadal dysgenesis (46,XY CGD) is a disorder of sex development (DSD) associated with anomalies in gonadal development that result in the presence of female external and internal genitalia despite the 46,XY karyotype.","definition_xrefs":["Orphanet:242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic lymphedema (obsolete MONDO:0019520)","termid":"MONDO:0019520"},{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY complete gonadal dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1750","NCIT:C120198","SCTID:95218005","DOID:14448","MEDGEN:445380","MESH:D006061","UMLS:C2936694","GARD:5068","OMIMPS:400044"],"synonyms":[{"name":"46 XY gonadal dysgenesis","type":"exact"},{"name":"46, XY CGD","type":"exact"},{"name":"46, XY complete gonadal dysgenesis","type":"exact"},{"name":"46, XY pure gonadal dysgenesis","type":"exact"},{"name":"46,XY CGD","type":"exact"},{"name":"46,XY SEX reversal","type":"exact"},{"name":"46,XY gonadal dysgenesis","type":"exact"},{"name":"46,XY pure gonadal dysgenesis","type":"exact"},{"name":"Swyer syndrome","type":"exact"},{"name":"gonadal dysgenesis, XY female type","type":"related"},{"name":"pure gonadal dysgenesis 46,XY","type":"exact"},{"name":"sex-reversing locus on X","type":"related"},{"name":"sex-reversing locus on X, formerly","type":"related"},{"name":"testis-determining Factor, X-chromosomal","type":"related"}],"termid":"MONDO:0010765","terms_by_termid":{"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0010765"}}}


id: FYPO:0002259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which L-leucine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal leucine import","synonyms":[{"name":"normal L-leucine import","type":"narrow"},{"name":"normal L-leucine import across plasma membrane","type":"exact"},{"name":"normal leucine import during mitotic cell cycle","type":"related"},{"name":"normal leucine import during vegetative growth","type":"exact"},{"name":"normal leucine import into cell","type":"exact"},{"name":"normal leucine uptake","type":"exact"}],"termid":"FYPO:0002259"}


id: PBO:0068802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 39, pseudogene","termid":"PBO:0068802"}


id: PBO:0057321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519a-2","termid":"PBO:0057321"}


id: MONDO:0004295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising in the lung due to exposure to asbestos.","definition_xrefs":["NCIT:C27925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"asbestos-related lung carcinoma","secondary_identifiers":["MEDGEN:231080","UMLS:C1332337","DOID:7596"],"synonyms":[{"name":"asbestos-related lung cancer","type":"exact"},{"name":"asbestos-related lung carcinoma","type":"exact"}],"termid":"MONDO:0004295","xrefs":{"Monarch":{"xref_id":"0004295"}}}


id: GO:0045833
data:
  {"annotated_genes":["SJAG_01906","SJAG_02380","SJAG_00053","SJAG_03170","SJAG_03940","SJAG_02104","SJAG_01187","SJAG_03130"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59709,92256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[95746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[72608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[117484,113354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[114736,111702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"negatively_regulates","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01187":null,"SJAG_01906":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_03130":null,"SJAG_03170":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"down regulation of lipid metabolic process","type":"exact"},{"name":"down-regulation of lipid metabolic process","type":"exact"},{"name":"downregulation of lipid metabolic process","type":"exact"},{"name":"inhibition of lipid metabolic process","type":"narrow"},{"name":"negative regulation of lipid metabolism","type":"exact"}],"termid":"GO:0045833","terms_by_termid":{"GO:0010895":null,"GO:0045717":null,"GO:0071072":null,"GO:1902647":null,"GO:2001211":null}}


id: GO:0098831
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region below the presynaptic membrane, characterized by electron-dense material, a specialized cytoskeletal matrix and accumulated (associated) synaptic vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"presynaptic active zone cytoplasmic component","synonyms":[{"name":"cortex of presynaptic active zone","type":"exact"},{"name":"presynaptic zone cortex","type":"exact"}],"termid":"GO:0098831"}


id: MONDO:0003115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the subglottic area.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of subglottis","termid":"MONDO:0021530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subglottic hemangioma","secondary_identifiers":["UMLS:C1336518","MEDGEN:234907","NCIT:C6026","DOID:472"],"synonyms":[{"name":"angioma of subglottis","type":"exact"},{"name":"angioma of the subglottis","type":"exact"},{"name":"hemangioma of subglottis","type":"exact"},{"name":"hemangioma of the subglottis","type":"exact"},{"name":"subglottic angioma","type":"exact"},{"name":"subglottic hemangioma","type":"exact"},{"name":"subglottis angioma","type":"exact"},{"name":"subglottis hemangioma","type":"exact"}],"termid":"MONDO:0003115","xrefs":{"Monarch":{"xref_id":"0003115"}}}


id: PBO:0036367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in clearing protein aggregates (predicted)","termid":"PBO:0036367"}


id: PBO:0047361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 15","termid":"PBO:0047361"}


id: GO:0008087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which calcium ions may cross a cell membrane in response to changes in membrane potential generated in response to a light stimulus.","definition_xrefs":["GOC:mah","PMID:9223679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel complex","termid":"GO:0005891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"light-activated voltage-gated calcium channel complex","synonyms":[{"name":"light-activated voltage gated calcium channel complex","type":"exact"},{"name":"light-activated voltage-dependent calcium channel complex","type":"exact"},{"name":"light-activated voltage-sensitive calcium channel complex","type":"exact"}],"termid":"GO:0008087"}


id: PBO:0053058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAS1 like ribosome biogenesis factor","termid":"PBO:0053058"}


id: PBO:0111874
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter family","termid":"PBO:0111874"}


id: GO:0010198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synergid cells undergo degeneration and death in response to penetration by the pollen tube. It is an active process that involves a dramatic decrease in cell volume, collapse of the vacuoles, and complete disintegration of the plasma membrane and most organelles.","definition_xrefs":["PMID:12215516","GOC:isa_complete","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synergid death","secondary_identifiers":["GO:0048470"],"synonyms":[{"name":"synergid cell death","type":"exact"},{"name":"synergid degeneration","type":"exact"}],"termid":"GO:0010198"}


id: MONDO:0002786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a diencephalon.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supratentorial cancer","termid":"MONDO:0002071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"diencephalic cancer","secondary_identifiers":["MEDGEN:233659","UMLS:C1334576","DOID:3843","NCIT:C5126"],"synonyms":[{"name":"cancer of diencephalon","type":"exact"},{"name":"diencephalic neoplasm","type":"related"},{"name":"diencephalon cancer","type":"exact"},{"name":"malignant diencephalic neoplasm","type":"exact"},{"name":"malignant diencephalic neoplasms","type":"exact"},{"name":"malignant diencephalic tumor","type":"exact"},{"name":"malignant diencephalic tumour","type":"exact"},{"name":"malignant diencephalon neoplasm","type":"exact"},{"name":"malignant neoplasm of diencephalon","type":"exact"},{"name":"tumor of diencephalon","type":"exact"},{"name":"tumour of diencephalon","type":"exact"}],"termid":"MONDO:0002786","xrefs":{"Monarch":{"xref_id":"0002786"}}}


id: PBO:0083040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta subunit of the oligosaccharyl transferase glycoprotein complex; complex is required for N-linked glycosylation of proteins in the endoplasmic reticulum","termid":"PBO:0083040"}


id: PBO:0090743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, Human BICC1 ortholog","termid":"PBO:0090743"}


id: MONDO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease or trauma involving a single peripheral nerve in isolation, or out of proportion to evidence of diffuse peripheral nerve dysfunction. Mononeuropathy multiplex refers to a condition characterized by multiple isolated nerve injuries. Mononeuropathies may result from a wide variety of causes, including ischemia; traumatic injury; compression; connective tissue diseases; cumulative trauma disorders; and other conditions.","definition_xrefs":["MESH:D020422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"mononeuropathy","secondary_identifiers":["UMLS:C0494491","EFO:0009558","DOID:1188","MEDGEN:99214","SCTID:128189008","icd11.foundation:1866592137"],"termid":"MONDO:0001397","xrefs":{"Monarch":{"xref_id":"0001397"}}}


id: MONDO:1010642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor XII deficiency that occurs in common bottlenose dolphin.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor XII deficiency, non-human animal","termid":"MONDO:1010074"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor XII deficiency, common bottlenose dolphin","secondary_identifiers":["OMIA:000364-9739"],"termid":"MONDO:1010642","xrefs":{"Monarch":{"xref_id":"1010642"}}}


id: GO:0060167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the adenosine receptor signaling pathway. The adenosine receptor pathway is the series of molecular signals generated as a consequence of an adenosine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled adenosine receptor signaling pathway","termid":"GO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of adenosine receptor signaling pathway","synonyms":[{"name":"regulation of adenosine receptor signalling pathway","type":"exact"}],"termid":"GO:0060167"}


id: GO:0019786
data:
  {"annotated_genes":["SJAG_01283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78808],"is_not":false,"summary":null,"term":"GO:0019786"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-C-terminal L-amino acid-glycyl-phosphatidylethanolamide + H2O = [protein]-C-terminal L-amino acid-glycine + a 1,2-diacyl-sn-glycero-3-phosphoethanolamine. An example of this reaction is the removal of ATG8 from membranes to which it is covalently linked to a phosphatidylethanolamid via its terminal glycine residue.","definition_xrefs":["PMID:22240591","PMID:22652539","PMID:28330855","PMID:2882172","PMID:28901328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"protein-phosphatidylethanolamide deconjugating activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"APG8-PE hydrolase","type":"related"},{"name":"APG8-specific protease activity","type":"narrow"},{"name":"ATG8-PE deconjugation activity","type":"narrow"},{"name":"ATG8-PE hydrolase activity","type":"narrow"},{"name":"Atg8-specific peptidase activity","type":"narrow"},{"name":"Atg8-specific protease activity","type":"exact"}],"termid":"GO:0019786","terms_by_termid":{"GO:0019786":null}}


id: MONDO:0700255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraneoplastic syndrome that involves the renal system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"},{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic renal syndrome","termid":"MONDO:0700255","xrefs":{"Monarch":{"xref_id":"0700255"}}}


id: GO:0071626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of biting and mashing food with the teeth prior to swallowing.","definition_xrefs":["GOC:gvg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mastication","synonyms":[{"name":"chewing","type":"exact"}],"termid":"GO:0071626"}


id: PBO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II heavy chain Myo3","termid":"PBO:0001606"}


id: PBO:0039674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 4 subunit sigma 1","termid":"PBO:0039674"}


id: FYPO:0000660
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate and other catalytic properties of a specified catalytic activity are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity phenotype","termid":"FYPO:0000654"},{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal catalytic activity","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"termid":"FYPO:0000660","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: GO:0060059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the retina is generated and organized in a camera-type eye during the embryonic life stage.","definition_xrefs":["GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic retina morphogenesis in camera-type eye","termid":"GO:0060059"}


id: FYPO:0006462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal at the silent mating-type cassette during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:19965387","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at silent mating-type cassette during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at silent mating-type cassette during first meiotic nuclear division","type":"exact"},{"name":"increased histone H2A phosphorylation at silent mating-type region during meiosis I","type":"exact"}],"termid":"FYPO:0006462"}


id: PR:O74899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC576.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C576.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.17c","synonyms":[{"name":"Spom972h-SPCC576.17c","type":"exact"}],"termid":"PR:O74899"}


id: GO:0002876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a chronic inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chronic inflammatory response","termid":"GO:0002678"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response to antigenic stimulus","termid":"GO:0002863"},{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response to antigenic stimulus","termid":"GO:0002874"},{"relation_name":"positively_regulates","term_name":"chronic inflammatory response to antigenic stimulus","termid":"GO:0002439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chronic inflammatory response to antigenic stimulus","synonyms":[{"name":"activation of chronic inflammatory response to antigenic stimulus","type":"narrow"},{"name":"stimulation of chronic inflammatory response to antigenic stimulus","type":"narrow"},{"name":"up regulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"up-regulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"upregulation of chronic inflammatory response to antigenic stimulus","type":"exact"}],"termid":"GO:0002876"}


id: GO:0106142
data:
  {"annotated_genes":["SJAG_03713"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100295],"is_not":false,"summary":null,"term":"GO:0106142"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine(645) in 25S rRNA = S-adenosyl-L-homocysteine + N(1)-methyladenine(645) in 25S rRNA.","definition_xrefs":["EC:2.1.1.287","PMID:23180764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140098","GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"rRNA (adenine-N1-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:43792"],"synonyms":[{"name":"25S rRNA (adenine(645)-N(1))-methyltransferase","type":"related"},{"name":"25S rRNA m(1)A(645) methyltransferase","type":"related"}],"termid":"GO:0106142","terms_by_termid":{"GO:0106142":null}}


id: PBO:0072183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 10","termid":"PBO:0072183"}


id: SO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_artifact","synonyms":[{"name":"insertion artifact","type":"exact"}],"termid":"SO:0002175"}


id: GO:0071696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an ectodermal placode over time from its initial formation until its mature state. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal placode development","termid":"GO:0071696"}


id: GO:0015218
data:
  {"annotated_genes":["SJAG_00154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81004],"is_not":false,"summary":null,"term":"GO:0015218"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a pyrimidine nucleotide, any compound consisting of a pyrimidine nucleoside esterified with (ortho)phosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"pyrimidine nucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0015218","terms_by_termid":{"GO:0015218":null}}


id: MONDO:0011023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary mixed polyposis syndrome (HMPS) describes an autosomal dominantly inherited large-bowel disease characterized by the presence of a mixture of hyperplastic, atypical juvenile and adenomatous polyps that are associated with an increased risk of developing colorectal cancer if left untreated.","definition_xrefs":["Orphanet:157794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hereditary mixed polyposis syndrome","secondary_identifiers":["GARD:16981","OMIMPS:601228","MEDGEN:1672870","DOID:0111684","icd11.foundation:219068911","MESH:C563365","UMLS:C5192681"],"synonyms":[{"name":"HMPS","type":"exact"},{"name":"hereditary mixed polyposis syndrome","type":"exact"}],"termid":"MONDO:0011023","xrefs":{"Monarch":{"xref_id":"0011023"}}}


id: GO:0009989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition that involves the interaction of the cell with the extracellular matrix.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-matrix recognition","termid":"GO:0009989"}


id: GO:0047417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-carbamoyl-D-amino acid = CO2 + NH3 + D-amino acid.","definition_xrefs":["EC:3.5.1.77","MetaCyc:3.5.1.77-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"N-carbamoyl-D-amino acid hydrolase activity","secondary_identifiers":["RHEA:11000"],"synonyms":[{"name":"N-carbamoyl-D-amino acid amidohydrolase activity","type":"related"}],"termid":"GO:0047417"}


id: GO:0006228
data:
  {"annotated_genes":["SJAG_02887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65613],"is_not":false,"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009209"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"UTP metabolic process","termid":"GO:0046051"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UTP biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"UTP anabolism","type":"exact"},{"name":"UTP biosynthesis","type":"exact"},{"name":"UTP formation","type":"exact"},{"name":"UTP synthesis","type":"exact"}],"termid":"GO:0006228","terms_by_termid":{"GO:0006228":null}}


id: FYPO:0000706
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific molecular function is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal molecular function","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"termid":"FYPO:0000706","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: PBO:0038861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with dual PH domains 1","termid":"PBO:0038861"}


id: MONDO:0042963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by an abnormal spleen position due to loss, weakness, or malformation of one or more of the ligaments that hold the spleen in its normal position in the left upper abdomen. It may present as a birth defect or follow injuries or pregnancy. Signs and symptoms include abdominal discomfort and splenomegaly.","definition_xrefs":["NCIT:C85224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splenic disorder","termid":"MONDO:0002332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"wandering spleen","secondary_identifiers":["GARD:328","MEDGEN:75782","MESH:D050805","NORD:1836","UMLS:C0272414","SCTID:191384005"],"synonyms":[{"name":"Ptoses, splenic","type":"related"},{"name":"Splenoptoses","type":"related"},{"name":"displaced spleen","type":"related"},{"name":"displaced spleens","type":"related"},{"name":"drifting spleen","type":"related"},{"name":"drifting spleens","type":"related"},{"name":"floating spleen","type":"related"},{"name":"floating spleens","type":"related"},{"name":"ptosis, splenic","type":"related"},{"name":"spleen, displaced","type":"related"},{"name":"spleen, drifting","type":"related"},{"name":"spleen, floating","type":"related"},{"name":"spleen, wandering","type":"related"},{"name":"spleens, displaced","type":"related"},{"name":"spleens, drifting","type":"related"},{"name":"spleens, floating","type":"related"},{"name":"spleens, wandering","type":"related"},{"name":"splenic Ptoses","type":"related"},{"name":"splenic ptosis","type":"related"},{"name":"splenoptosis","type":"related"},{"name":"wandering spleen","type":"exact"},{"name":"wandering spleens","type":"related"}],"termid":"MONDO:0042963","xrefs":{"Monarch":{"xref_id":"0042963"}}}


id: MONDO:0008612
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88963],"is_not":false,"summary":null,"term":"MONDO:0008612"}]},"cv_name":"mondo","definition":"Tuberous sclerosis mapped to chromosome 9q34 (TSC1 gene).","definition_xrefs":["NCIT:C75122"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete tuberous sclerosis complex (obsolete MONDO:0019341)","termid":"MONDO:0019341"},{"relation_name":"is_a","term_name":"tuberous sclerosis","termid":"MONDO:0001734"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"tuberous sclerosis 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:191100","UMLS:C1854465","MEDGEN:344288","MESH:C565346","DOID:0080324","GARD:15121"],"synonyms":[{"name":"TSC1","type":"related"},{"name":"TSC1 tuberous sclerosis","type":"exact"},{"name":"tuberose sclerosis","type":"related"},{"name":"tuberous sclerosis 1","type":"exact"},{"name":"tuberous sclerosis Complex","type":"related"},{"name":"tuberous sclerosis caused by mutation in TSC1","type":"exact"},{"name":"tuberous sclerosis type 1","type":"exact"},{"name":"tuberous sclerosis, type 1","type":"related"},{"name":"tuberous sclerosis-1","type":"exact"}],"termid":"MONDO:0008612","terms_by_termid":{"MONDO:0008612":null},"xrefs":{"Monarch":{"xref_id":"0008612"}}}


id: GO:1904874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomerase RNA localization to Cajal body.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:25467444","GO_REF:0000058","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of telomerase RNA localization to Cajal body","termid":"GO:1904872"},{"relation_name":"positively_regulates","term_name":"telomerase RNA localization to Cajal body","termid":"GO:0090671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomerase RNA localization to Cajal body","synonyms":[{"name":"activation of telomerase RNA localization to Cajal body","type":"narrow"},{"name":"up regulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"up-regulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"upregulation of telomerase RNA localization to Cajal body","type":"exact"}],"termid":"GO:1904874"}


id: PATO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the state of bearer's mechanical, physical, and biochemical processes.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physiological state","termid":"PATO:0001912"}


id: MOD:00881
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 465 megerd with 199. Remap to MOD:00552 DiMethyl-CH2D.","definition_xrefs":["PubMed:9252331","Unimod:465"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00881 N-reductive amination-D (obsolete MOD:00881)","termid":"MOD:00881"}


id: PBO:0046365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 2","termid":"PBO:0046365"}


id: MONDO:0017408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare disorder that appears after the first year and a half of life in previously healthy children. It is characterized by rapid-onset weight gain, hypothalamic dysfunction, breathing abnormalities, and autonomic system dysregulation. The hypothalamic dysfunction manifestations include inability to maintain normal water balance, high prolactin levels, low thyroid, low cortisol, and early or late puberty. The breathing abnormalities include sleep apnea and alveolar hypoventilation, requiring ventilation support. The autonomic system dysregulation includes eye abnormalities, intestinal abnormalities, temperature dysregulation, and low heart rhythm. This disorder requires early recognition because it may lead to cardiorespiratory arrest. Up to 40% of the patients develop tumors of neural crest origin.","definition_xrefs":["NCIT:C121944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rapid-onset childhood obesity-hypothalamic dysfunction-hypoventilation-autonomic dysregulation syndrome","secondary_identifiers":["Orphanet:293987","UMLS:C4751121","MEDGEN:1670711","NORD:1648","GARD:10407"],"synonyms":[{"name":"ROHHAD","type":"exact"},{"name":"ROHHAD syndrome","type":"exact"},{"name":"ROHHADNET","type":"exact"},{"name":"Rapid-onset Obesity with Hypothalamic Dysfunction, Hypoventilation, and Autonomic Dysregulation","type":"exact"},{"name":"rapid-onset childhood obesity-hypothalamic dysfunction-hypoventilation-autonomic dysregulation-neural tumors syndrome","type":"exact"},{"name":"rapid-onset childhood obesity-hypothalamic dysfunction-hypoventilation-autonomic dysregulation-neural tumours syndrome","type":"exact"},{"name":"rapid-onset obesity with hypothalamic dysfunction, hypoventilation and autonomic dysregulation","type":"related"},{"name":"rapid-onset obesity with hypothalamic dysfunction, hypoventilation, and autonomic dysregulation","type":"exact"},{"name":"rapid-onset obesity with hypothalamic dysfunction, hypoventilation, and autonomic dysregulation syndrome","type":"exact"}],"termid":"MONDO:0017408","xrefs":{"Monarch":{"xref_id":"0017408"}}}


id: MONDO:1010508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebral amyloid angiopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy, non-human animal","termid":"MONDO:1010028"},{"relation_name":"is_a","term_name":"amyloidosis, dog","termid":"MONDO:1011467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral amyloid angiopathy, dog","secondary_identifiers":["OMIA:002138-9615"],"termid":"MONDO:1010508","xrefs":{"Monarch":{"xref_id":"1010508"}}}


id: PBO:0042847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 54","termid":"PBO:0042847"}


id: PBO:0087456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a Golgi mannosyltransferase complex; this complex also contains Anp1p, Mnn9p, Mnn10p, and Hoc1p, and mediates elongation of the polysaccharide mannan backbone; has homology to Mnn10p","termid":"PBO:0087456"}


id: PBO:0076856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TET2 antisense RNA 1","termid":"PBO:0076856"}


id: GO:0047239
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxymandelonitrile + UDP-D-glucose = H+ + taxiphyllin + UDP.","definition_xrefs":["EC:2.4.1.178","RHEA:15961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxymandelonitrile glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.178-RXN","KEGG_REACTION:R02709"],"synonyms":[{"name":"UDP-glucose:4-hydroxymandelonitrile glucosyltransferase activity","type":"related"},{"name":"UDPglucose:4-hydroxymandelonitrile glucosyltransferase activity","type":"related"},{"name":"cyanohydrin glucosyltransferase activity","type":"related"}],"termid":"GO:0047239"}


id: GO:0061650
data:
  {"annotated_genes":["SJAG_05022","SJAG_01679","SJAG_01018","SJAG_02918","SJAG_05340","SJAG_00604","SJAG_04857","SJAG_02082","SJAG_00208","SJAG_00300","SJAG_00293","SJAG_00855","SJAG_04612","SJAG_01251","SJAG_04573","SJAG_01561","SJAG_00931"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061651"},{"annotations":[80656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141046"},{"annotations":[120425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061654"},{"annotations":[77464,106411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061656"},{"annotations":[90004,76134,89626,73076,89844,118793,79804,66389,75195,104181,116272,79320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061631"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of a ubiquitin-like protein (ULP) from one protein to another molecule, usually another protein, via the reaction X-SCP + Y = Y-SCP + X, where both the X-SCP and Y-SCP linkages are thioester bonds between the C-terminal amino acid of SCP and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00293":null,"SJAG_00300":null,"SJAG_00604":null,"SJAG_00855":null,"SJAG_00931":null,"SJAG_01018":null,"SJAG_01251":null,"SJAG_01561":null,"SJAG_01679":null,"SJAG_02082":null,"SJAG_02918":null,"SJAG_04573":null,"SJAG_04612":null,"SJAG_04857":null,"SJAG_05022":null,"SJAG_05340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016746","GO:0019787","GO:0016740"],"is_obsolete":false,"name":"ubiquitin-like protein conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"E2","type":"broad"},{"name":"small conjugating protein conjugating enzyme activity","type":"exact"}],"termid":"GO:0061650","terms_by_termid":{"GO:0061631":null,"GO:0061651":null,"GO:0061654":null,"GO:0061656":null,"GO:0141046":null}}


id: PBO:0075518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member A","termid":"PBO:0075518"}


id: PBO:0047709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin like 3","termid":"PBO:0047709"}


id: PBO:0071911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 50","termid":"PBO:0071911"}


id: PBO:0091320
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate KM, ATP KM 1.9 mM","termid":"PBO:0091320"}


id: PBO:0083554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene ECM1/YAL059W","termid":"PBO:0083554"}


id: PBO:0031207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_actin_cortical_patch_localization","termid":"PBO:0031207"}


id: GO:0032820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell proliferation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation","termid":"GO:0032817"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"natural killer cell proliferation involved in immune response","termid":"GO:0002324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell proliferation involved in immune response","synonyms":[{"name":"regulation of NK cell proliferation during immune response","type":"related"},{"name":"regulation of natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0032820"}


id: GO:0097262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eoxin C4 = eoxin D4 + 5-L-glutamyl amino acid.","definition_xrefs":["PMID:18184802","PMID:18647347","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"eoxin D4 synthase activity","secondary_identifiers":["Reactome:R-HSA-2161945"],"termid":"GO:0097262"}


id: GO:0072415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about the assembly, orientation or integrity of the spindle is received and converted into a molecular signal, contributing to a spindle checkpoint.","definition_xrefs":["GOC:mah","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in spindle checkpoint (obsolete GO:0072415)","synonyms":[{"name":"sensing involved in spindle checkpoint","type":"related"},{"name":"spindle checkpoint sensor mechanism","type":"related"},{"name":"spindle checkpoint sensor process","type":"related"}],"termid":"GO:0072415"}


id: PBO:0056351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP7 antisense RNA 1","termid":"PBO:0056351"}


id: PBO:0067277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 356, pseudogene","termid":"PBO:0067277"}


id: PBO:0046553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 7","termid":"PBO:0046553"}


id: PBO:0024482
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STaurosporine Supersensitive","termid":"PBO:0024482"}


id: GO:0120047
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100324],"is_not":false,"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to a medial cortical node.","definition_xrefs":["PMID:19474789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to medial cortex","termid":"GO:0106012"},{"relation_name":"is_a","term_name":"regulation of protein localization to medial cortical node","termid":"GO:0120046"},{"relation_name":"positively_regulates","term_name":"protein localization to medial cortical node","termid":"GO:1902577"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120047","terms_by_termid":{"GO:0120047":null}}


id: PBO:0069284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 540, pseudogene","termid":"PBO:0069284"}


id: PBO:0066470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rieske Fe-S domain containing","termid":"PBO:0066470"}


id: PBO:0040463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP13A4 antisense RNA 1","termid":"PBO:0040463"}


id: FYPO:0003063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cytoskeleton morphology","termid":"FYPO:0003063"}


id: PBO:0048562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated olfactory signaling regulator","termid":"PBO:0048562"}


id: GO:0016504
data:
  {"annotated_genes":["SJAG_02625","SJAG_00837","SJAG_05252","SJAG_00591","SJAG_04484","SJAG_04211"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72586,77076,78722,80865],"is_not":false,"summary":null,"term":"GO:0016504"},{"annotations":[79955,76027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061133"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a peptidase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"peptidase regulator activity","termid":"GO:0061134"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02625":null,"SJAG_04211":null,"SJAG_04484":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"peptidase activator activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-168865"],"synonyms":[{"name":"protease activator activity","type":"narrow"}],"termid":"GO:0016504","terms_by_termid":{"GO:0016504":null,"GO:0061133":null}}


id: PBO:0067076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 107, pseudogene","termid":"PBO:0067076"}


id: PBO:0018076
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DCP1A","termid":"PBO:0018076"}


id: GO:1900396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of kojic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kojic acid biosynthetic process","termid":"GO:1900394"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"kojic acid biosynthetic process","termid":"GO:2001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of kojic acid biosynthetic process","synonyms":[{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"activation of C6H6O4 anabolism","type":"related"},{"name":"activation of C6H6O4 biosynthesis","type":"related"},{"name":"activation of C6H6O4 biosynthetic process","type":"related"},{"name":"activation of C6H6O4 formation","type":"related"},{"name":"activation of C6H6O4 synthesis","type":"related"},{"name":"activation of kojic acid anabolism","type":"exact"},{"name":"activation of kojic acid biosynthesis","type":"exact"},{"name":"activation of kojic acid biosynthetic process","type":"narrow"},{"name":"activation of kojic acid formation","type":"exact"},{"name":"activation of kojic acid synthesis","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"positive regulation of C6H6O4 anabolism","type":"related"},{"name":"positive regulation of C6H6O4 biosynthesis","type":"related"},{"name":"positive regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"positive regulation of C6H6O4 formation","type":"related"},{"name":"positive regulation of C6H6O4 synthesis","type":"related"},{"name":"positive regulation of kojic acid anabolism","type":"exact"},{"name":"positive regulation of kojic acid biosynthesis","type":"exact"},{"name":"positive regulation of kojic acid formation","type":"exact"},{"name":"positive regulation of kojic acid synthesis","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"up regulation of C6H6O4 anabolism","type":"related"},{"name":"up regulation of C6H6O4 biosynthesis","type":"related"},{"name":"up regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"up regulation of C6H6O4 formation","type":"related"},{"name":"up regulation of C6H6O4 synthesis","type":"related"},{"name":"up regulation of kojic acid anabolism","type":"exact"},{"name":"up regulation of kojic acid biosynthesis","type":"exact"},{"name":"up regulation of kojic acid biosynthetic process","type":"exact"},{"name":"up regulation of kojic acid formation","type":"exact"},{"name":"up regulation of kojic acid synthesis","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"up-regulation of C6H6O4 anabolism","type":"related"},{"name":"up-regulation of C6H6O4 biosynthesis","type":"related"},{"name":"up-regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"up-regulation of C6H6O4 formation","type":"related"},{"name":"up-regulation of C6H6O4 synthesis","type":"related"},{"name":"up-regulation of kojic acid anabolism","type":"exact"},{"name":"up-regulation of kojic acid biosynthesis","type":"exact"},{"name":"up-regulation of kojic acid biosynthetic process","type":"exact"},{"name":"up-regulation of kojic acid formation","type":"exact"},{"name":"up-regulation of kojic acid synthesis","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"upregulation of C6H6O4 anabolism","type":"related"},{"name":"upregulation of C6H6O4 biosynthesis","type":"related"},{"name":"upregulation of C6H6O4 biosynthetic process","type":"related"},{"name":"upregulation of C6H6O4 formation","type":"related"},{"name":"upregulation of C6H6O4 synthesis","type":"related"},{"name":"upregulation of kojic acid anabolism","type":"exact"},{"name":"upregulation of kojic acid biosynthesis","type":"exact"},{"name":"upregulation of kojic acid biosynthetic process","type":"exact"},{"name":"upregulation of kojic acid formation","type":"exact"},{"name":"upregulation of kojic acid synthesis","type":"exact"}],"termid":"GO:1900396"}


id: PBO:0072570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase catalytic subunit M1","termid":"PBO:0072570"}


id: PBO:0058358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4731","termid":"PBO:0058358"}


id: PBO:0029249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_filaments_present_in_increased_numbers","termid":"PBO:0029249"}


id: MONDO:0022623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK4 linked melanoma","termid":"MONDO:0022623","xrefs":{"Monarch":{"xref_id":"0022623"}}}


id: GO:0031736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR11 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CCR11 chemokine receptor binding","synonyms":[{"name":"CCR11 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031736"}


id: PBO:0040494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AU RNA binding methylglutaconyl-CoA hydratase","termid":"PBO:0040494"}


id: PBO:0045923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 15, pseudogene","termid":"PBO:0045923"}


id: MONDO:0006793
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"Disease of the glandular, anterior portion of the pituitary (pituitary gland, anterior) resulting in hypersecretion of adenohypophyseal hormones such as growth hormone; prolactin; thyrotropin; luteinizing hormone; follicle stimulating hormone ; and adrenocorticotropic hormone. Hyperpituitarism usually is caused by a functional adenoma.","definition_xrefs":["MESH:D006964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior pituitary gland disorder","termid":"MONDO:0024468"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"hyperpituitarism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1000973","DOID:2444","ICD9:253.1","MEDGEN:43783","SCTID:10649000","UMLS:C0020506","MedDRA:10020716"],"termid":"MONDO:0006793","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0006793"}}}


id: PR:O94468
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mag2 gene.","definition_xrefs":["UniProtKB:O94468","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.11","synonyms":[{"name":"3-methyladenine DNA glycosidase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"3MEA DNA glycosylase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mag2","type":"exact"}],"termid":"PR:O94468"}


id: FYPO:0001035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is thicker than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall thickness during vegetative growth","termid":"FYPO:0006745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002946","FYPO:0001985"],"is_obsolete":false,"name":"increased cell wall thickness during vegetative growth","synonyms":[{"name":"increased cell wall thickness during mitotic cell cycle","type":"related"},{"name":"thickened cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0001035"}


id: FYPO:0000548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of protein modification processes is longer than normal. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of protein modification during vegetative growth","synonyms":[{"name":"increased duration of protein modification during mitotic cell cycle","type":"related"},{"name":"increased duration of protein/peptide modification during vegetative growth","type":"exact"},{"name":"prolonged protein modification during vegetative growth","type":"exact"},{"name":"protein/peptide modification: increased duration","type":"related"}],"termid":"FYPO:0000548"}


id: PBO:0070729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10","termid":"PBO:0070729"}


id: GO:0008405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-11,12-epoxyeicosatrienoic acid.","definition_xrefs":["PMID:10681399","RHEA:51480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate epoxygenase activity","termid":"GO:0008392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"arachidonate 11,12-epoxygenase activity","synonyms":[{"name":"arachidonic acid 11,12-epoxygenase activity","type":"exact"},{"name":"cytochrome P450 CYP2C38","type":"narrow"}],"termid":"GO:0008405"}


id: PBO:0076902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 56, pseudogene","termid":"PBO:0076902"}


id: PBO:0078350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 16-1","termid":"PBO:0078350"}


id: PBO:0007824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide methionine sulfoxide reductase Mxr1 (predicted)","termid":"PBO:0007824"}


id: GO:0170016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together an endosome and an ER membrane either via membrane lipid binding or by interacting with an endosome protein, to establish and facilitate organelle exchange.","definition_xrefs":["PMID:33124732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum-organelle membrane tether activity","termid":"GO:0170009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"endoplasmic reticulum-endosome tether activity","termid":"GO:0170016"}


id: GO:0015296
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion(out) + cation(out) = anion(in) + cation(in).","definition_xrefs":["TC:2.A.1.14.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"monoatomic anion:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"anion:cation symporter activity","type":"broad"}],"termid":"GO:0015296","terms_by_termid":{"GO:0015379":null}}


id: FYPO:0001042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division","synonyms":[{"name":"inviable following spore germination, single or double cell division","type":"exact"},{"name":"inviable germinated spore, single or double cell division","type":"exact"},{"name":"lethal after spore germination, single or double cell division","type":"exact"}],"termid":"FYPO:0001042"}


id: MONDO:0020983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease-related laceration or tearing of tissues of the heart, including the free-wall MYOCARDIUM; HEART SEPTUM; PAPILLARY MUSCLES; CHORDAE TENDINEAE; and any of the HEART VALVES. Pathological rupture usually results from myocardial infarction (HEART RUPTURE, POST-INFARCTION).","definition_xrefs":["MESH:D006341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"myocardial rupture","secondary_identifiers":["MEDGEN:6750","UMLS:C0018813"],"synonyms":[{"name":"Cardiac Free Wall Rupture","type":"related"},{"name":"Cardiac Rupture","type":"related"},{"name":"Cardiac Ruptures","type":"related"},{"name":"Free Wall Rupture, Heart","type":"related"},{"name":"Heart Rupture","type":"related"},{"name":"Heart Ruptures","type":"related"},{"name":"Myocardial Rupture","type":"related"},{"name":"Rupture of heart","type":"related"},{"name":"Ventricular Free Wall Rupture","type":"related"}],"termid":"MONDO:0020983","xrefs":{"Monarch":{"xref_id":"0020983"}}}


id: PBO:0065986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1M pseudogene","termid":"PBO:0065986"}


id: PBO:0063361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 1","termid":"PBO:0063361"}


id: GO:0051715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The killing by an organism of a cell in another organism by means of the rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["GOC:ai","PMID:22484288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytolysis","termid":"GO:0019835"},{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytolysis in another organism","secondary_identifiers":["GO:0001901","GO:0044649"],"synonyms":[{"name":"cytolysis in other organism","type":"exact"},{"name":"cytolysis of cells of another organism","type":"exact"},{"name":"envenomation resulting in cytolysis in another organism","type":"narrow"},{"name":"envenomation resulting in cytolysis in other organism","type":"narrow"}],"termid":"GO:0051715"}


id: GO:0052222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052222)","synonyms":[{"name":"negative aerotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative aerotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052222"}


id: PBO:0053647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 698","termid":"PBO:0053647"}


id: PBO:0016528
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RECombination","termid":"PBO:0016528"}


id: GO:1900846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of naphtho-gamma-pyrone biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of naphtho-gamma-pyrone biosynthetic process","synonyms":[{"name":"regulation of naphtho-gamma-pyrone anabolism","type":"exact"},{"name":"regulation of naphtho-gamma-pyrone biosynthesis","type":"exact"},{"name":"regulation of naphtho-gamma-pyrone formation","type":"exact"},{"name":"regulation of naphtho-gamma-pyrone synthesis","type":"exact"},{"name":"regulation of naphtho-gamma-pyrones anabolism","type":"related"},{"name":"regulation of naphtho-gamma-pyrones biosynthesis","type":"related"},{"name":"regulation of naphtho-gamma-pyrones biosynthetic process","type":"related"},{"name":"regulation of naphtho-gamma-pyrones formation","type":"related"},{"name":"regulation of naphtho-gamma-pyrones synthesis","type":"related"}],"termid":"GO:1900846"}


id: MONDO:0013329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"17q23.1-q23.2 microduplication is a newly described cause of familial isolated clubfoot.","definition_xrefs":["Orphanet:238578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial clubfoot with or without associated lower limb anomalies","termid":"MONDO:0016046"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 17","termid":"MONDO:0016967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial clubfoot due to 17q23.1q23.2 microduplication","secondary_identifiers":["GARD:17177","MEDGEN:462230","UMLS:C3150880","OMIM:613618"],"synonyms":[{"name":"chromosome 17q23.1-q23.2 DUPLICATION syndrome","type":"related"},{"name":"hereditary clubfoot due to 17q23.1-q23.2 microduplication","type":"exact"}],"termid":"MONDO:0013329","xrefs":{"Monarch":{"xref_id":"0013329"}}}


id: MONDO:1010693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, sheep","secondary_identifiers":["OMIA:000038-9940"],"termid":"MONDO:1010693","xrefs":{"Monarch":{"xref_id":"1010693"}}}


id: PBO:0036134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036134"}


id: PBO:0086050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function reputedly involved in spore wall assembly","termid":"PBO:0086050"}


id: PBO:0079717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 4","termid":"PBO:0079717"}


id: GO:1902742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in anatomical structure development.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie","GO_REF:0000060","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"},{"relation_name":"part_of","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in development","synonyms":[{"name":"activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"apoptosis involved in anatomical structure development","type":"narrow"},{"name":"apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"apoptotic process involved in anatomical structure development","type":"exact"},{"name":"apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"type I programmed cell death involved in development of an anatomical structure","type":"narrow"}],"termid":"GO:1902742"}


id: PBO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein","termid":"PBO:0000081"}


id: PBO:0028074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_cut","termid":"PBO:0028074"}


id: GO:0071111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclic di-3',5'-guanylate + H2O = 5'-phosphoguanylyl(3'->5')guanosine + H+.","definition_xrefs":["EC:3.1.4.52","RHEA:24902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"cyclic-guanylate-specific phosphodiesterase activity","secondary_identifiers":["MetaCyc:RXN0-4181","KEGG_REACTION:R08991"],"synonyms":[{"name":"PDEA1","type":"related"},{"name":"VieA","type":"related"},{"name":"c-di-GMP phosphodiesterase activity","type":"related"},{"name":"c-di-GMP-specific phosphodiesterase activity","type":"related"},{"name":"cyclic bis(3->5')diguanylate phosphodiesterase activity","type":"related"},{"name":"phosphodiesterase A1 activity","type":"related"}],"termid":"GO:0071111"}


id: PBO:0056332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 13","termid":"PBO:0056332"}


id: PBO:0003293
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Srb9","termid":"PBO:0003293"}


id: MONDO:0004274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast carcinoma characterized by the presence of a mesenchymal cellular component. The mesenchymal cellular component ranges from cartilaginous and osseous, to purely sarcomatous.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaplastic breast carcinoma","termid":"MONDO:0006043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mixed epithelial/mesenchymal metaplastic breast carcinoma","secondary_identifiers":["MEDGEN:307769","NCIT:C40364","UMLS:C1513365","DOID:7541","ONCOTREE:MMBC"],"synonyms":[{"name":"breast carcinosarcoma","type":"exact"},{"name":"mixed type metaplastic breast cancer","type":"related"}],"termid":"MONDO:0004274","xrefs":{"Monarch":{"xref_id":"0004274"}}}


id: GO:0009466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class I cytochrome c (obsolete GO:0009466)","synonyms":[{"name":"class I cytochrome c","type":"exact"}],"termid":"GO:0009466"}


id: PBO:0066096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS protein activator like 1","termid":"PBO:0066096"}


id: MONDO:1012455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular melanosis, non-human animal","termid":"MONDO:1011996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ocular melanosis, dog","secondary_identifiers":["OMIA:001804-9615"],"termid":"MONDO:1012455","xrefs":{"Monarch":{"xref_id":"1012455"}}}


id: GO:0051279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sequestering of calcium ion","termid":"GO:0051282"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of release of sequestered calcium ion into cytosol","synonyms":[{"name":"regulation of calcium ion (Ca2+) mobilization","type":"exact"},{"name":"regulation of calcium mobilization","type":"exact"},{"name":"regulation of cytoplasmic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"regulation of cytoplasmic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"regulation of release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"regulation of release of stored calcium ion (Ca2+)","type":"broad"},{"name":"regulation of release of stored calcium ion (Ca2+) into cytoplasm","type":"exact"},{"name":"regulation of release of stored calcium ion (Ca2+) into cytosol","type":"exact"}],"termid":"GO:0051279"}


id: GO:0070546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an amino group from L-phenylalanine to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete L-phenylalanine transaminase activity (obsolete GO:0070546)","synonyms":[{"name":"L-phenylalanine aminotransferase activity","type":"exact"}],"termid":"GO:0070546"}


id: PBO:0044954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 1","termid":"PBO:0044954"}


id: GO:0000834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate = ADP + 5,6-bisdiphosphoinositol-1D-myo-inositol (1,2,3,4)tetrakisphosphate.","definition_xrefs":["GOC:elh","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol pentakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"5-diphosphoinositol pentakisphosphate 6-kinase activity","synonyms":[{"name":"inositol heptakisphosphate 6-kinase activity","type":"broad"}],"termid":"GO:0000834"}


id: PBO:0063709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 3","termid":"PBO:0063709"}


id: PBO:0003347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI domain","termid":"PBO:0003347"}


id: GO:0005381
data:
  {"annotated_genes":["SJAG_04737","SJAG_04867","SJAG_04675","SJAG_02968","SJAG_04260","SJAG_02473"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67544,115204,115786],"is_not":false,"summary":null,"term":"GO:0005381"},{"annotations":[72024,105719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015093"},{"annotations":[94311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061840"}]},"cv_name":"molecular_function","definition":"Enables the transfer of iron (Fe) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02473":null,"SJAG_02968":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04737":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"iron ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-435349","Reactome:R-HSA-5655733","GO:0005382","Reactome:R-HSA-5623558","GO:0016033","Reactome:R-HSA-904830","GO:0097689","Reactome:R-HSA-917936"],"synonyms":[{"name":"iron cation channel activity","type":"exact"},{"name":"iron channel activity","type":"exact"},{"name":"iron transporter activity","type":"exact"},{"name":"multicopper ferroxidase iron transport mediator activity","type":"related"},{"name":"transmembrane iron ion permease activity","type":"exact"},{"name":"transmembrane iron permease activity","type":"exact"},{"name":"zinc, iron permease activity","type":"related"}],"termid":"GO:0005381","terms_by_termid":{"GO:0005381":null,"GO:0015093":null,"GO:0061840":null}}


id: GO:0030946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate. This reaction requires metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004721","GO:0003824","GO:0140096","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"protein tyrosine phosphatase activity, metal-dependent","termid":"GO:0030946"}


id: PBO:0004991
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.11.1.6","termid":"PBO:0004991"}


id: MONDO:0005275
data:
  {"annotated_genes":["SJAG_00566","SJAG_03453","SJAG_03855","SJAG_01159","SJAG_03689","SJAG_00169","SJAG_05979","SJAG_00229","SJAG_00570","SJAG_03626","SJAG_04114","SJAG_02206","SJAG_03125","SJAG_02805","SJAG_02194","SJAG_01836"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010926"},{"annotations":[86902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[88638,89170,88639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[88036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[88184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"},{"annotations":[88397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957261"},{"annotations":[88396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957263"},{"annotations":[88165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957294"},{"annotations":[87996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013878"},{"annotations":[87127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014612"},{"annotations":[88959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030690"},{"annotations":[88903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009329"},{"annotations":[88882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100215"},{"annotations":[87698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100220"},{"annotations":[87674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014206"}]},"cv_name":"mondo","definition":"A disease involving the lung.","direct_ancestors":[{"relation_name":"is_a","term_name":"lower respiratory tract disorder","termid":"MONDO:0000270"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00229":null,"SJAG_00566":null,"SJAG_00570":null,"SJAG_01159":null,"SJAG_01836":null,"SJAG_02194":null,"SJAG_02206":null,"SJAG_02805":null,"SJAG_03125":null,"SJAG_03453":null,"SJAG_03626":null,"SJAG_03689":null,"SJAG_03855":null,"SJAG_04114":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"lung disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:850","MESH:D008171","SCTID:19829001","NCIT:C3198","UMLS:C0024115","EFO:0003818","MEDGEN:7399","ICD9:518.89"],"synonyms":[{"name":"disease of lung","type":"exact"},{"name":"disease or disorder of lung","type":"exact"},{"name":"disorder of lung","type":"exact"},{"name":"lung disease","type":"exact"},{"name":"lung disease or disorder","type":"exact"},{"name":"lung disorder","type":"exact"},{"name":"lung disorders","type":"exact"},{"name":"pulmonary disease","type":"exact"},{"name":"pulmonary diseases","type":"exact"},{"name":"pulmonary disorder","type":"exact"},{"name":"pulmonary disorders","type":"exact"}],"termid":"MONDO:0005275","terms_by_termid":{"MONDO:0008903":null,"MONDO:0009329":null,"MONDO:0010926":null,"MONDO:0011014":null,"MONDO:0011871":null,"MONDO:0013878":null,"MONDO:0014206":null,"MONDO:0014612":null,"MONDO:0030690":null,"MONDO:0100215":null,"MONDO:0100220":null,"MONDO:0800029":null,"MONDO:0957261":null,"MONDO:0957263":null,"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0005275"}}}


id: PR:O74913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.02c gene.","definition_xrefs":["UniProtKB:O74913","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C757.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.02c","synonyms":[{"name":"Spom972h-SPCC757.02c","type":"exact"}],"termid":"PR:O74913"}


id: PBO:0076497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonyl-tRNA synthetase 3","termid":"PBO:0076497"}


id: FYPO:0002329
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing pravastatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on pravastatin","synonyms":[{"name":"normal cell population growth in presence of pravastatin","type":"exact"},{"name":"normal cell population growth on pravastatin","type":"exact"},{"name":"normal cellular response to pravastatin","type":"related"},{"name":"normal vegetative cell population growth on pravastatin","type":"exact"}],"termid":"FYPO:0002329"}


id: MONDO:0001349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dental caries","termid":"MONDO:0005276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontoclasia","secondary_identifiers":["SCTID:196305005","DOID:11736","UMLS:C0341004","MEDGEN:574111","icd11.foundation:43527109","ICD9:521.05"],"termid":"MONDO:0001349","xrefs":{"Monarch":{"xref_id":"0001349"}}}


id: GO:0044105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xylitol + NAD+ = L-xylulose + NADH + H+.","definition_xrefs":["RHEA:68100","PMID:14736891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-xylulose reductase (NADH) activity","secondary_identifiers":["MetaCyc:RXN-11825"],"termid":"GO:0044105"}


id: PBO:0053279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B5","termid":"PBO:0053279"}


id: GO:0009907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light photoperiod stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm.","definition_xrefs":["GOC:go_curators","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"},{"relation_name":"is_a","term_name":"response to red light","termid":"GO:0010114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to photoperiod, red light","termid":"GO:0009907"}


id: GO:1904863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of beta-catenin-TCF complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"beta-catenin-TCF complex assembly","termid":"GO:1904837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of beta-catenin-TCF complex assembly","synonyms":[{"name":"regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904863"}


id: PBO:0058288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4663","termid":"PBO:0058288"}


id: MOD:01791
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal phosphohistidine residue to phosphohistidine immonium ion.","definition_xrefs":["PubMed:20847263","PubMed:18688235","PubMed:17690871"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"phosphorylated L-histidine","termid":"MOD:00890"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphohistidine immonium ion","synonyms":[{"name":"2-(1H-imidazolyl)ethaniminium","type":"exact"}],"termid":"MOD:01791"}


id: MONDO:0018160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited malignant tumor that originates in the nuclear layer of the retina. A predisposition to retinoblastoma has been associated with 13q14 cytogenetic abnormalities. Patients with the inherited form appear to be at increased risk for secondary nonocular malignancies such as osteosarcoma, malignant fibrous histiocytoma, and fibrosarcoma.","definition_xrefs":["NCIT:C8495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"hereditary retinoblastoma","secondary_identifiers":["MEDGEN:155869","OMIM:180200","UMLS:C0751483","GARD:17544","Orphanet:357027","DOID:4648"],"synonyms":[{"name":"RB1","type":"exact"},{"name":"familial retinoblastoma","type":"exact"},{"name":"hereditary retinoblastoma","type":"exact"},{"name":"retinoblastoma, autosomal dominant, somatic mutation","type":"exact"},{"name":"retinoblastoma, trilateral, autosomal dominant, somatic mutation","type":"exact"}],"termid":"MONDO:0018160","xrefs":{"Monarch":{"xref_id":"0018160"}}}


id: GO:0004359
data:
  {"annotated_genes":["SJAG_02618","SJAG_00964","SJAG_03775","SJAG_00392","SJAG_00691"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65349,79443,80173,95285,113066],"is_not":false,"summary":null,"term":"GO:0004359"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH4+.","definition_xrefs":["RHEA:15889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00691":null,"SJAG_00964":null,"SJAG_02618":null,"SJAG_03775":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glutaminase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70609","EC:3.5.1.2"],"synonyms":[{"name":"L-glutaminase activity","type":"related"},{"name":"L-glutamine amidohydrolase activity","type":"related"},{"name":"glutaminase I","type":"related"},{"name":"glutamine aminohydrolase activity","type":"related"}],"termid":"GO:0004359","terms_by_termid":{"GO:0004359":null}}


id: MONDO:0017992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"autoinflammatory syndrome with pyogenic bacterial infection and amylopectinosis","secondary_identifiers":["MEDGEN:1720168","Orphanet:329173","GARD:17494","UMLS:C5394674"],"termid":"MONDO:0017992","xrefs":{"Monarch":{"xref_id":"0017992"}}}


id: MONDO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic cancerous tumor arising from the ovary.","definition_xrefs":["NCIT:C3843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian cyst","termid":"MONDO:0003282"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant ovarian cyst","secondary_identifiers":["UMLS:C0235770","DOID:2145","MEDGEN:116000"],"synonyms":[{"name":"malignant ovarian cyst","type":"exact"},{"name":"malignant ovarian cyst (disease)","type":"exact"},{"name":"ovarian cyst (disease), malignant","type":"exact"}],"termid":"MONDO:0002224","xrefs":{"Monarch":{"xref_id":"0002224"}}}


id: MONDO:0100188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypoalphalipoproteinemia that is has its basis in the disruption of ApoA-I and ApoC-III.","definition_xrefs":["MONDO:patterns/inborn_metabolic_disrupts","PMID:20616715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoalphalipoproteinemia","termid":"MONDO:0017773"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"combined ApoA-I and ApoC-III deficiency","termid":"MONDO:0100188","xrefs":{"Monarch":{"xref_id":"0100188"}}}


id: GO:0160073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Casparian strip, a region of plant cell wall specialised to act as a seal to prevent back leakage of secreted material.","definition_xrefs":["PMID:28104889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"plant-type cell wall assembly","termid":"GO:0071668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Casparian strip assembly","synonyms":[{"name":"Casparian strip formation","type":"exact"}],"termid":"GO:0160073"}


id: PBO:0053189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptin receptor overlapping transcript","termid":"PBO:0053189"}


id: GO:0048296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"regulation of isotype switching to IgA isotypes","synonyms":[{"name":"regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"regulation of class switching to IgA isotypes","type":"exact"},{"name":"regulation of isotype switch recombination to IgA isotypes","type":"exact"}],"termid":"GO:0048296"}


id: PBO:0089053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb3","termid":"PBO:0089053"}


id: GO:2000497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000495"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000497"}


id: GO:0002738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of plasmacytoid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dendritic cell cytokine production","termid":"GO:0002732"},{"relation_name":"is_a","term_name":"regulation of plasmacytoid dendritic cell cytokine production","termid":"GO:0002736"},{"relation_name":"positively_regulates","term_name":"plasmacytoid dendritic cell cytokine production","termid":"GO:0002373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of plasmacytoid dendritic cell cytokine production","synonyms":[{"name":"activation of plasmacytoid dendritic cell cytokine production","type":"narrow"},{"name":"stimulation of plasmacytoid dendritic cell cytokine production","type":"narrow"},{"name":"up regulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"up-regulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"upregulation of plasmacytoid dendritic cell cytokine production","type":"exact"}],"termid":"GO:0002738"}


id: PBO:0091042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Cmp7","termid":"PBO:0091042"}


id: GO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a vacuolar membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of vacuolar membrane (obsolete GO:0000306)","synonyms":[{"name":"extrinsic to vacuolar membrane","type":"exact"}],"termid":"GO:0000306"}


id: PBO:0047486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 1 pseudogene 2","termid":"PBO:0047486"}


id: GO:0007186
data:
  {"annotated_genes":["SJAG_02233","SJAG_02027","SJAG_02444","SJAG_04026","SJAG_02311","SJAG_03081","SJAG_02481","SJAG_01345","SJAG_01754","SJAG_00574","SJAG_04312","SJAG_01254","SJAG_02426","SJAG_00472","SJAG_01699","SJAG_00266","SJAG_01245","SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58177,62875,64559,74132],"is_not":false,"summary":null,"term":"GO:0007186"},{"annotations":[108794,108444,107847,110979,118568,96092,111490,117535,103764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010619"},{"annotations":[102347,93946,94612,109926,118384],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to its receptor, in which the activated receptor promotes the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, and ends with regulation of a downstream cellular process. The pathway can start from the plasma membrane, Golgi or nuclear membrane.","definition_xrefs":["GOC:bf","Wikipedia:G_protein-coupled_receptor","PMID:24568158","GOC:mah","PMID:16902576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01345":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_01978":null,"SJAG_02027":null,"SJAG_02233":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-373076","Reactome:R-HSA-388396","GO:0038042"],"synonyms":[{"name":"G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"G-protein coupled receptor signaling pathway via GPCR dimer","type":"narrow"},{"name":"G-protein coupled receptor signalling pathway","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"GPCR signaling pathway","type":"exact"},{"name":"GPCR signalling pathway","type":"exact"},{"name":"dimeric G-protein coupled receptor signaling pathway","type":"narrow"},{"name":"dimeric G-protein coupled receptor signalling pathway","type":"narrow"}],"termid":"GO:0007186","terms_by_termid":{"GO:0007186":null,"GO:0010619":null,"GO:0110034":null}}


id: PBO:0000573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup45","termid":"PBO:0000573"}


id: PBO:0071972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase like 1","termid":"PBO:0071972"}


id: PBO:0077266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 8B","termid":"PBO:0077266"}


id: PBO:0073277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 11","termid":"PBO:0073277"}


id: GO:0097334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a perphenazine stimulus. Perphenazine is a phenothiazine derivative having a chloro substituent at the 2-position and a 3-[4-(2-hydroxyethyl)piperazin-1-yl]propyl group at the N-10 position.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to perphenazine","termid":"GO:0097334"}


id: MONDO:1012093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephropathy, non-human animal","termid":"MONDO:1011905"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomerulonephropathy, dog","secondary_identifiers":["OMIA:000414-9615"],"termid":"MONDO:1012093","xrefs":{"Monarch":{"xref_id":"1012093"}}}


id: GO:0032139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a dinucleotide insertion or deletion.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA insertion or deletion binding","termid":"GO:0032135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dinucleotide insertion or deletion binding","synonyms":[{"name":"dinucleotide insertion binding","type":"narrow"}],"termid":"GO:0032139"}


id: GO:0102501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannonate + NADP = NADPH + H+ + D-fructuronate.","definition_xrefs":["PMID:22925190","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-fructuronate reductase activity","secondary_identifiers":["MetaCyc:RXN-14368"],"termid":"GO:0102501"}


id: PBO:0048573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin","termid":"PBO:0048573"}


id: PBO:0036176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_mitosis","termid":"PBO:0036176"}


id: GO:0020025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Singlet microtubule that lie underneath the inner membrane pellicle complex and emanate from the basal ring of the conoid.","definition_xrefs":["PMID:24800253","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"subpellicular microtubule","termid":"GO:0020025"}


id: GO:0060091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonmotile primary cilium that is found at the apical surface of auditory receptor cells. The kinocilium is surrounded by actin-based stereocilia.","definition_xrefs":["GOC:dph","PMID:15882574","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"is_a","term_name":"9+2 non-motile cilium","termid":"GO:0097732"},{"relation_name":"part_of","term_name":"stereocilium bundle","termid":"GO:0032421"},{"relation_name":"part_of","term_name":"organelle","termid":"GO:0043226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"kinocilium","secondary_identifiers":["Wikipedia:Kinocilium"],"termid":"GO:0060091"}


id: FYPO:0000452
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abnormal protein localization to chromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to chromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000452","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: MONDO:0859341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 15","secondary_identifiers":["OMIM:620177","UMLS:C5774279","MEDGEN:1824052","DOID:0060968"],"termid":"MONDO:0859341","xrefs":{"Monarch":{"xref_id":"0859341"}}}


id: GO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of B cell antigen processing and presentation","termid":"GO:0002622"},{"relation_name":"positively_regulates","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell antigen processing and presentation","synonyms":[{"name":"activation of B cell antigen processing and presentation","type":"narrow"},{"name":"positive regulation of B lymphocyte antigen processing and presentation","type":"exact"},{"name":"positive regulation of B-cell antigen processing and presentation","type":"exact"},{"name":"positive regulation of B-lymphocyte antigen processing and presentation","type":"exact"},{"name":"stimulation of B cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of B cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of B cell antigen processing and presentation","type":"exact"},{"name":"upregulation of B cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002624"}


id: FYPO:0002486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic strand displacement is decreased. Meiotic strand displacement is the part of meiotic recombination in which the broken 3' single-strand DNA molecule that formed heteroduplex DNA with its complement in an intact duplex DNA is rejected.","definition_xrefs":["GO:0000714","PomBase:mah","PMID:22723423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased meiotic strand displacement","synonyms":[{"name":"decreased D-loop unwinding","type":"related"},{"name":"decreased meiotic D-loop dissociation","type":"exact"},{"name":"decreased meiotic D-loop processing","type":"related"},{"name":"reduced meiotic strand displacement","type":"exact"}],"termid":"FYPO:0002486"}


id: GO:0032673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-4 production.","definition_xrefs":["GOC:mah","PMID:29778524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-4 production","termid":"GO:0032633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-4 production","secondary_identifiers":["GO:0150133","GO:0045402"],"synonyms":[{"name":"regulation of IL-4 production","type":"exact"},{"name":"regulation of interleukin-4 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-4 secretion","type":"narrow"}],"termid":"GO:0032673"}


id: PBO:0026916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribosome_biogenesis","termid":"PBO:0026916"}


id: FYPO:0007482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during the first meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"decreased protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during meiosis I","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during meiosis I","type":"exact"}],"termid":"FYPO:0007482"}


id: PBO:0069161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 413, pseudogene","termid":"PBO:0069161"}


id: PBO:0062558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 5","termid":"PBO:0062558"}


id: PBO:0112979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease; role in preventing L-A mycovirus pathogenesis","termid":"PBO:0112979"}


id: PBO:0047744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 8","termid":"PBO:0047744"}


id: PBO:0089013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L14","termid":"PBO:0089013"}


id: GO:1901415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole biosynthetic process from glycine and succinyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","termid":"GO:1901413"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole biosynthetic process from glycine and succinyl-CoA","termid":"GO:0033527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0033013","GO:0044281","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","synonyms":[{"name":"activation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"activation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"activation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"narrow"},{"name":"activation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"activation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"positive regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"positive regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"positive regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"positive regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"}],"termid":"GO:1901415"}


id: GO:0062194
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99159],"is_not":false,"summary":null,"term":"GO:0062194"}]},"cv_name":"cellular_component","definition":"A microtubule minus end that is part of a cytoplasmic microtubule.","definition_xrefs":["PMID:18061564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule minus-end","termid":"GO:0036449"},{"relation_name":"part_of","term_name":"cytoplasmic microtubule","termid":"GO:0005881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic microtubule minus-end","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062194","terms_by_termid":{"GO:0062194":null}}


id: GO:0042766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of nucleosomes along a DNA fragment.","definition_xrefs":["PMID:12006495"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosome mobilization (obsolete GO:0042766)","synonyms":[{"name":"nucleosome sliding","type":"exact"}],"termid":"GO:0042766"}


id: GO:0051507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + a beta-sitosterol = UDP + O-glucosyl-beta-sitosterol.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-sitosterol UDP-glucosyltransferase activity (obsolete GO:0051507)","termid":"GO:0051507"}


id: PR:Q9UUJ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga9 gene.","definition_xrefs":["UniProtKB:Q9UUJ3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.16","synonyms":[{"name":"Spom972h-rga9","type":"exact"}],"termid":"PR:Q9UUJ3"}


id: GO:0009697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid metabolic process","termid":"GO:0009696"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"salicylic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-981"],"synonyms":[{"name":"salicylate biosynthetic process","type":"exact"},{"name":"salicylic acid anabolism","type":"exact"},{"name":"salicylic acid biosynthesis","type":"exact"},{"name":"salicylic acid formation","type":"exact"},{"name":"salicylic acid synthesis","type":"exact"}],"termid":"GO:0009697"}


id: PBO:0076000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saitohin","termid":"PBO:0076000"}


id: GO:2000479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cAMP-dependent protein kinase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cAMP-dependent protein kinase activity","synonyms":[{"name":"regulation of 3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of 3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of AMPK","type":"related"},{"name":"regulation of ATP:protein phosphotransferase (cAMP-dependent) activity","type":"exact"},{"name":"regulation of PKA","type":"related"},{"name":"regulation of PKA C","type":"related"},{"name":"regulation of STK22","type":"related"},{"name":"regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"regulation of cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"regulation of cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of protein kinase A activity","type":"related"}],"termid":"GO:2000479"}


id: PBO:0116953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1 inhibitor, Ecl1","termid":"PBO:0116953"}


id: PBO:0069599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 876, pseudogene","termid":"PBO:0069599"}


id: GO:0099526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals that conveys information from the presynapse to the nucleus via cytoskeletal transport of a protein from a presynapse to the component to the nucleus where it affects biochemical processes that occur in the nucleus (e.g DNA transcription, mRNA splicing, or DNA/histone modifications).","definition_xrefs":["GOC:dos","PMID:24317321","PMID:25652077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic signal transduction","termid":"GO:0098928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"presynapse to nucleus signaling pathway","synonyms":[{"name":"presynaptic signaling to nucleus","type":"exact"}],"termid":"GO:0099526"}


id: MONDO:0033280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome 16","secondary_identifiers":["DOID:0080272","MEDGEN:1622427","UMLS:C4540453","OMIM:617783"],"synonyms":[{"name":"NPHS16","type":"related"},{"name":"nephrotic syndrome 16","type":"exact"},{"name":"nephrotic syndrome, type 16","type":"exact"}],"termid":"MONDO:0033280","xrefs":{"Monarch":{"xref_id":"0033280"}}}


id: FYPO:0004366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic nuclear division results in the connection of both sister kinetochores to microtubules from the same spindle pole.","definition_xrefs":["PMID:17426725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000337"],"is_obsolete":false,"name":"syntelic kinetochore attachment during mitosis","synonyms":[{"name":"syntelic attachment of spindle microtubules to kinetochore during mitosis","type":"exact"},{"name":"syntelic kinetochore attachment during mitotic M phase","type":"related"},{"name":"syntelic kinetochore attachment during mitotic nuclear division","type":"exact"},{"name":"syntelic kinetochore attachment during vegetative growth","type":"exact"}],"termid":"FYPO:0004366"}


id: GO:0006544
data:
  {"annotated_genes":["SJAG_02450","SJAG_03914","SJAG_01766","SJAG_02901","SJAG_03641","SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[73848,75109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[79846,98295,75953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycine, aminoethanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01766":null,"SJAG_02450":null,"SJAG_02901":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_03914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glycine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycine metabolism","type":"exact"}],"termid":"GO:0006544","terms_by_termid":{"GO:0006545":null,"GO:0019264":null,"GO:0019464":null}}


id: GO:0098671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface that does not mediate or trigger entry into the host cell. This binding is typically reversible and enhances significantly infectivity by concentrating the virus in the vicinity of its entry receptors, or bringing it to an organ in which its target cells are located.","definition_xrefs":["VZ:3943","PMID:18351291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion receptor-mediated virion attachment to host cell","synonyms":[{"name":"viral attachment to host adhesion receptor","type":"exact"}],"termid":"GO:0098671"}


id: PBO:0042654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 3","termid":"PBO:0042654"}


id: PBO:0081271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 35","termid":"PBO:0081271"}


id: PBO:0062100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 50 pseudogene","termid":"PBO:0062100"}


id: GO:0035648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fluctuation in mating behavior that occurs over an approximately 24 hour cycle.","definition_xrefs":["PMID:17276917","GOC:bf","GOC:dos","PMID:11470898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"},{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian mating behavior","synonyms":[{"name":"circadian mating behaviour","type":"exact"},{"name":"circadian mating rhythm","type":"exact"}],"termid":"GO:0035648"}


id: MONDO:0024500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine neoplasm that involves the duodenum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neuroendocrine neoplasm","termid":"MONDO:0018510"},{"relation_name":"is_a","term_name":"tumor of duodenum","termid":"MONDO:0021375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal neuroendocrine neoplasm","secondary_identifiers":["MEDGEN:1800031","UMLS:C5568608"],"synonyms":[{"name":"duodenum NET","type":"exact"},{"name":"duodenum neuroendocrine neoplasm","type":"exact"},{"name":"duodenum neuroendocrine tumor","type":"exact"},{"name":"duodenum neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"duodenum neuroendocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of duodenum","type":"exact"}],"termid":"MONDO:0024500","xrefs":{"Monarch":{"xref_id":"0024500"}}}


id: GO:0032692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"negatively_regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-1 production","secondary_identifiers":["GO:0045361","GO:0050711"],"synonyms":[{"name":"down regulation of interleukin-1 production","type":"exact"},{"name":"down-regulation of interleukin-1 production","type":"exact"},{"name":"downregulation of interleukin-1 production","type":"exact"},{"name":"inhibition of interleukin-1 production","type":"narrow"},{"name":"negative regulation of IL-1 production","type":"exact"},{"name":"negative regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-1 secretion","type":"narrow"}],"termid":"GO:0032692"}


id: GO:0009662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an etioplast. An etioplast is a plastid arrested in the development of chloroplasts from proplastids due to absence of light or low light conditions.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"etioplast organization","synonyms":[{"name":"etioplast organisation","type":"exact"},{"name":"etioplast organization and biogenesis","type":"related"}],"termid":"GO:0009662"}


id: PBO:0042435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 42","termid":"PBO:0042435"}


id: PBO:0026888
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_segregation_with_lagging_chromosomes_and_decreased_rate_of_mitotic_spindle_elongation","termid":"PBO:0026888"}


id: PBO:0089296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine phosphoribosyltransferase (APRT) Apt1","termid":"PBO:0089296"}


id: MOD:01448
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-3,3-dihydroxyoalanine.","definition_xrefs":["RESID:AA0492","PubMed:17558559","PubMed:11435113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3,3-dihydroxyoalanine","synonyms":[{"name":"(S)-2-amino-3,3-dihydroxypropanoic acid","type":"exact"},{"name":"2-(dihydroxymethyl)glycine","type":"exact"},{"name":"3,3-dihydroxy-L-alanine","type":"exact"},{"name":"3,3-dihydroxyalanine","type":"exact"},{"name":"3-hydroxy-L-serine","type":"exact"},{"name":"3-oxoalanine hydrate","type":"exact"},{"name":"C(alpha)-formylglycine hydrate","type":"related"}],"termid":"MOD:01448"}


id: GO:0048873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of cells within a population of cells in a tissue.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"},{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}


id: GO:2001247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylcholine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"positive regulation of phosphatidylcholine metabolic process","termid":"GO:0150173"},{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine biosynthetic process","termid":"GO:2001245"},{"relation_name":"positively_regulates","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidylcholine biosynthetic process","synonyms":[{"name":"positive regulation of phosphatidylcholine anabolism","type":"exact"},{"name":"positive regulation of phosphatidylcholine biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidylcholine formation","type":"exact"},{"name":"positive regulation of phosphatidylcholine synthesis","type":"exact"}],"termid":"GO:2001247"}


id: GO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + H2O + NAD+ = pyruvate + NH3 + NADH + H+.","definition_xrefs":["EC:1.4.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"alanine dehydrogenase activity","secondary_identifiers":["MetaCyc:ALANINE-DEHYDROGENASE-RXN","RHEA:18405"],"synonyms":[{"name":"AlaDH","type":"related"},{"name":"L-alanine dehydrogenase activity","type":"related"},{"name":"L-alanine:NAD+ oxidoreductase (deaminating)","type":"related"},{"name":"NAD-dependent alanine dehydrogenase activity","type":"related"},{"name":"NAD-linked alanine dehydrogenase activity","type":"related"},{"name":"NADH-dependent alanine dehydrogenase activity","type":"related"},{"name":"alanine oxidoreductase activity","type":"related"},{"name":"alpha-alanine dehydrogenase activity","type":"related"}],"termid":"GO:0000286"}


id: FYPO:0005822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NEDD8-specific protease activity (deneddylase activity) is decreased under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased peptidase activity","termid":"FYPO:0000668"},{"relation_name":"is_a","term_name":"abnormal NEDD8-specific protease activity","termid":"FYPO:0005821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased NEDD8-specific protease activity","synonyms":[{"name":"decreased deneddylase activity","type":"exact"},{"name":"reduced NEDD8-specific protease activity","type":"exact"}],"termid":"FYPO:0005822"}


id: GO:0050597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + taxa-4(20),11-dien-5alpha-yl acetate = 10beta-hydroxytaxa-4(20),11-dien-5alpha-yl acetate + H2O + NADP+.","definition_xrefs":["RHEA:15241","EC:1.14.14.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"taxane 10-beta-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R06309","MetaCyc:1.14.13.76-RXN"],"synonyms":[{"name":"5-alpha-taxadienol-10-beta-hydroxylase activity","type":"related"},{"name":"taxa-4(20),11-dien-5alpha-yl acetate,NADPH:oxygen oxidoreductase (10beta-hydroxylating)","type":"related"},{"name":"taxane 10b-hydroxylase activity","type":"exact"},{"name":"taxane 10beta-hydroxylase activity","type":"related"}],"termid":"GO:0050597"}


id: PBO:0043245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 5","termid":"PBO:0043245"}


id: GO:0014885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an injury stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of wounding","termid":"GO:0014822"},{"relation_name":"is_a","term_name":"response to injury involved in regulation of muscle adaptation","termid":"GO:0014876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of injury involved in regulation of muscle adaptation","synonyms":[{"name":"detection of injury involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014885"}


id: PR:Q9Y704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.04","synonyms":[{"name":"Spom972h-mok14","type":"exact"}],"termid":"PR:Q9Y704"}


id: PBO:0076686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 4","termid":"PBO:0076686"}


id: PBO:0012584
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens CDK1","termid":"PBO:0012584"}


id: MONDO:0008469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary bone dysplasia disorder characterized by congenital hypotrichosis associated with rhizomelic short stature (more pronounced in upper limbs than lower limbs), limited hip abduction and mild genu varum. Flared and irregular metaphyses, delayed and irregular epiphiseal ossification and pear-shaped vertebral bodies are characteristic radiologic findings.","definition_xrefs":["Orphanet:168443"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia-hypotrichosis syndrome","secondary_identifiers":["MESH:C535783","GARD:10101","MEDGEN:357120","OMIM:183849","UMLS:C1866728"],"synonyms":[{"name":"Whyte Petersen McAlister syndrome","type":"related"},{"name":"Whyte syndrome","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with hypotrichosis","type":"related"}],"termid":"MONDO:0008469","xrefs":{"Monarch":{"xref_id":"0008469"}}}


id: MONDO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy in collagen vascular disease","secondary_identifiers":["ICD9:357.1","UMLS:C0154759","ICD9:357.4","DOID:13649","MEDGEN:509648","SCTID:193177003"],"termid":"MONDO:0001765","xrefs":{"Monarch":{"xref_id":"0001765"}}}


id: GO:0043942
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042174"},{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"negatively_regulates","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043942","terms_by_termid":{"GO:0075297":null}}


id: PBO:0070889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 21","termid":"PBO:0070889"}


id: GO:2000095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"regulates","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway, planar cell polarity pathway","synonyms":[{"name":"regulation of PCP pathway","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of Wnt-JNK signaling pathway","type":"related"},{"name":"regulation of Wnt-PCP signaling pathway","type":"related"},{"name":"regulation of Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of non-canonical Wnt signaling pathway","type":"related"}],"termid":"GO:2000095"}


id: GO:0031418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"L-ascorbic acid binding","synonyms":[{"name":"L-ascorbate binding","type":"exact"},{"name":"vitamin C binding","type":"exact"}],"termid":"GO:0031418"}


id: MONDO:0011129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"open-angle glaucoma","termid":"MONDO:0005338"},{"relation_name":"is_a","term_name":"congenital glaucoma","termid":"MONDO:0020366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma type 1C","secondary_identifiers":["GARD:2484","MEDGEN:356544","OMIM:601682","UMLS:C1866483"],"synonyms":[{"name":"GLC1C","type":"related"},{"name":"glaucoma 1, primary open angle, C","type":"related"},{"name":"glaucoma 1C, primary open angle","type":"exact"}],"termid":"MONDO:0011129","xrefs":{"Monarch":{"xref_id":"0011129"}}}


id: GO:0018530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-6-hydroxynicotine + H2O + O2 = 6-hydroxypseudooxynicotine + H2O2.","definition_xrefs":["EC:1.5.3.6","RHEA:10012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(R)-6-hydroxynicotine oxidase activity","secondary_identifiers":["UM-BBD_reactionID:r0477","MetaCyc:R-6-HYDROXYNICOTINE-OXIDASE-RXN","KEGG_REACTION:R07170"],"synonyms":[{"name":"(R)-6-hydroxynicotine:oxygen oxidoreductase activity","type":"related"},{"name":"6-hydroxy-D-nicotine oxidase activity","type":"exact"},{"name":"D-6-hydroxynicotine oxidase activity","type":"related"}],"termid":"GO:0018530"}


id: PBO:0049806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1 pseudogene 1","termid":"PBO:0049806"}


id: GO:0140715
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme complex that catalyzes the ligation of serine to tRNA(Ser), forming L-seryl-tRNA(Ser).","definition_xrefs":["PMID:30943413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"serine-tRNA ligase complex","termid":"GO:0140715"}


id: MONDO:0042498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"excluded_subClassOf","term_name":"ichthyosis","termid":"MONDO:0019269"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ruzicka-Goerz-Anton syndrome","secondary_identifiers":["MESH:C537192","UMLS:C2931438","MEDGEN:444055"],"synonyms":[{"name":"Ruzicka Goerz Anton syndrome","type":"exact"},{"name":"ichthyosis congenita, neurosensory deafness, oligophrenia, dental aplasia, brachydactyly, clinodactyly, accessory cervical ribs and thyroid carcinoma","type":"related"},{"name":"ichthyosis deafness intellectual disability skeletal anomalies","type":"related"},{"name":"ichthyosis deafness mental retardation skeletal anomalies","type":"related"}],"termid":"MONDO:0042498","xrefs":{"Monarch":{"xref_id":"0042498"}}}


id: PBO:0063803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase regulatory subunit alpha 2","termid":"PBO:0063803"}


id: MONDO:0014210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive syndromic intellectual disability","termid":"MONDO:0100598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability-hypotonia-spasticity-sleep disorder syndrome","secondary_identifiers":["UMLS:C3809672","OMIM:615493","DOID:0081202","Orphanet:356996","GARD:17541","MEDGEN:816002"],"synonyms":[{"name":"MRT37","type":"related"},{"name":"intellectual disability, autosomal recessive 37","type":"related"},{"name":"intellectual disability, autosomal recessive type 37","type":"exact"},{"name":"mental retardation, autosomal recessive 37","type":"related"},{"name":"mental retardation, autosomal recessive type 37","type":"exact"},{"name":"mental retardation, autosomal recessive, 37","type":"exact"}],"termid":"MONDO:0014210","xrefs":{"Monarch":{"xref_id":"0014210"}}}


id: GO:1990294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The phosphorylation of a peptidyl-threonine to form peptidyl-O-phospho-L-threonine on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["PMID:19357077"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-threonine trans-autophosphorylation (obsolete GO:1990294)","termid":"GO:1990294"}


id: GO:0018086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["RESID:AA0191"],"gene_count":0,"genotype_count":0,"name":"obsolete alanine racemization (obsolete GO:0018086)","synonyms":[{"name":"alanine racemization","type":"exact"}],"termid":"GO:0018086"}


id: PBO:0053530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 528","termid":"PBO:0053530"}


id: FYPO:0005464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to one or both cell tip(s), but then remains there for a longer or shorter time than normal.","definition_xrefs":["PomBase:mah","PMID:12894167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal maintenance of protein location at cell tip during vegetative growth","synonyms":[{"name":"abnormal maintenance of protein localization at cell tip during vegetative growth","type":"exact"},{"name":"abnormal maintenance of protein location at cell end during vegetative growth","type":"exact"},{"name":"abnormal maintenance of protein location at cell tip during mitotic cell cycle","type":"related"},{"name":"unstable protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"unstable protein localization to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005464"}


id: GO:0047823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + D-glutamine = gamma-D-glutamyl-D-glutamate + NH4+. Can also transfer additional glutamyl residues to a peptide, extending the polypeptide chain.","definition_xrefs":["EC:2.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"D-glutamyltransferase activity","secondary_identifiers":["RHEA:35623","MetaCyc:D-GLUTAMYLTRANSFERASE-RXN"],"synonyms":[{"name":"D-gamma-glutamyl transpeptidase activity","type":"related"},{"name":"D-glutamyl transpeptidase activity","type":"related"},{"name":"glutamine:D-glutamyl-peptide 5-glutamyltransferase activity","type":"related"}],"termid":"GO:0047823"}


id: PBO:0072345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 31","termid":"PBO:0072345"}


id: PBO:0071170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 10","termid":"PBO:0071170"}


id: PBO:0038335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activity_directly_regulates_activity_of","termid":"PBO:0038335"}


id: PBO:0043879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein like 2","termid":"PBO:0043879"}


id: PBO:0027657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027657"}


id: FYPO:0003349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase B is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["GO:1990023","PomBase:mah","GO:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during anaphase B","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during anaphase B","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during anaphase B during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during anaphase B during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0003349"}


id: PBO:0091408
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Rad57 independently of Swi5","termid":"PBO:0091408"}


id: GO:0035319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of a prehair in the approximately 10 hour period following its emergence from an epidermal cell in an imaginal disc-derived wing. Prehair elongation is guided and/or driven by the polymerization of actin filaments and the orderly crosslinking of filaments into bundles.","definition_xrefs":["GOC:mtg_sensu","PMID:11832234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing hair elongation","synonyms":[{"name":"wing hair elongation","type":"exact"},{"name":"wing prehair extension","type":"related"}],"termid":"GO:0035319"}


id: GO:0015350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of methotrexate, 4-amino-10-methylformic acid from one side of a membrane to the other. Methotrexate is a folic acid analogue and a potent competitive inhibitor of dihydrofolate reductase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"methotrexate transmembrane transporter activity","synonyms":[{"name":"methotrexate transporter activity","type":"related"}],"termid":"GO:0015350"}


id: FYPO:0000505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of necrotic cell death is increased. Necrotic cell death is morphologically characterized by a gain in cell volume (oncosis), swelling of organelles, plasma membrane rupture and subsequent loss of intracellular contents.","definition_xrefs":["PomBase:mah","GO:0070265"],"gene_count":0,"genotype_count":0,"name":"obsolete increased necrotic cell death (obsolete FYPO:0000505)","synonyms":[{"name":"necrotic cell death: increased","type":"related"}],"termid":"FYPO:0000505"}


id: PR:Q10485
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pex19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17C9.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.14","synonyms":[{"name":"Spom972h-pex19","type":"exact"}],"termid":"PR:Q10485"}


id: GO:0140604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the coenzyme mycofactocin, a variably glycosylated small molecule electron pair carrier derived from the C-terminal valine-tyrosine dipeptide of the ribosomally translated precursor peptide MftA.","definition_xrefs":["PMID:33014324","PMID:30778644","PMID:21223593","PMID:30183269","PMID:31381312","PMID:27312813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mycofactocin biosynthetic process","termid":"GO:0140604"}


id: PBO:0059405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33 pseudogene 2","termid":"PBO:0059405"}


id: PBO:0043850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 like","termid":"PBO:0043850"}


id: PBO:0068058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 363","termid":"PBO:0068058"}


id: GO:0046301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-N-isopropylacetanilide biosynthetic process (obsolete GO:0046301)","synonyms":[{"name":"2-chloro-N-isopropylacetanilide anabolism","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthesis","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthetic process","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide formation","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide synthesis","type":"exact"}],"termid":"GO:0046301"}


id: GO:0071310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to organic substance (obsolete GO:0071310)","termid":"GO:0071310"}


id: PBO:0002988
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.5","termid":"PBO:0002988"}


id: MONDO:0002724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heterogeneous group of disorders characterized by the abnormal growth and accumulation of mast cells in one or more organ systems. Recent data suggest that most variants of mast cell neoplasms are clonal disorders. (WHO, 2001)","definition_xrefs":["NCIT:C9295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid neoplasm","termid":"MONDO:0005170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"mast cell neoplasm","secondary_identifiers":["SCTID:414653009","MEDGEN:83178","DOID:3664","UMLS:C0334664","EFO:0009000","ICD9:238.79"],"synonyms":[{"name":"Mast cell proliferative disease","type":"exact"},{"name":"Mast cell tumor","type":"exact"},{"name":"Mast cell tumour","type":"exact"},{"name":"mast cell neoplasm","type":"exact"},{"name":"mast cell tumor","type":"exact"},{"name":"mast cell tumour","type":"exact"},{"name":"neoplasm of Mast cells","type":"exact"},{"name":"neoplasm of the Mast cells","type":"exact"},{"name":"tumor of Mast cells","type":"exact"},{"name":"tumor of the Mast cells","type":"exact"},{"name":"tumour of Mast cells","type":"exact"},{"name":"tumour of the Mast cells","type":"exact"}],"termid":"MONDO:0002724","xrefs":{"Monarch":{"xref_id":"0002724"}}}


id: FYECO:0000456
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which pyrogallol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ pyrogallol","termid":"FYECO:0000456"}


id: GO:1903378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidative stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron apoptotic process","termid":"GO:0043525"},{"relation_name":"is_a","term_name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902177"},{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903376"},{"relation_name":"positively_regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0036480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"activation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"activation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"positive regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"positive regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"up regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up-regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"up-regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"upregulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"upregulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1903378"}


id: PBO:0002668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb9","termid":"PBO:0002668"}


id: GO:0032942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,2,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["MetaCyc:RXN-7182","PMID:16107538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-1,4,5,6-tetrakisphosphate 2-kinase activity","synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 2-kinase activity","type":"broad"},{"name":"inositol tetrakisphosphate 2-kinase activity","type":"broad"},{"name":"inositol-tetrakisphosphate 2-kinase activity","type":"broad"}],"termid":"GO:0032942"}


id: GO:0062176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA metabolic process that results in the disassembly of R-loops. R-loops are three-stranded nucleic acid structures consisitng of an RNA:DNA heteroduplex and a looped-out non-template strand. Aberrant formation and persistence of R-loops block transcription elongation and cause DNA damage. Mechanisms that resolve R-loops are essential for genome stability.","definition_xrefs":["PMID:28790157","PMID:33986538","PMID:27252122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"R-loop processing","synonyms":[{"name":"R-loop disassembly","type":"exact"}],"termid":"GO:0062176"}


id: PBO:0056539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mast cell expressed membrane protein 1","termid":"PBO:0056539"}


id: PBO:0057479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 598","termid":"PBO:0057479"}


id: FYPO:0004704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in increased numbers","termid":"FYPO:0004538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0002399","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"interphase microtubules present in increased numbers","synonyms":[{"name":"cytoplasmic microtubules present in greater numbers","type":"exact"},{"name":"cytoplasmic microtubules present in increased numbers during mitotic interphase","type":"exact"},{"name":"increased level of interphase MTs","type":"exact"},{"name":"interphase cytoplasmic microtubules present in increased numbers","type":"exact"},{"name":"interphase microtubules present in increased numbers during mitotic cell cycle","type":"related"},{"name":"interphase microtubules present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004704"}


id: PBO:0086939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase-activating protein; regulates endocytosis via inactivation of Vps21p at endosomes and vacuole fusion via inactivation of Ypt7p at vacuoles; also acts on Ypt52p and Sec4p; localizes to plasma membrane, sites of polarized growth; relocalizes from bud neck to cytoplasm upon DNA replication stress; similar to TBC-domain Tre2 oncogene; MSB3 has a paralog, MSB4, that arose from the whole genome duplication; human homolog USP6NL can complement yeast msb3 msb4 double null","termid":"PBO:0086939"}


id: MONDO:0018867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete maple syrup urine disease (obsolete MONDO:0018867)","termid":"MONDO:0018867","xrefs":{"Monarch":{"xref_id":"0018867"}}}


id: GO:0000287
data:
  {"annotated_genes":["SJAG_02734","SJAG_00044","SJAG_03096","SJAG_01648","SJAG_00669","SJAG_00402","SJAG_02369","SJAG_00502","SJAG_04972","SJAG_04882","SJAG_01209","SJAG_00134","SJAG_00381","SJAG_04747","SJAG_02679","SJAG_00461","SJAG_01351","SJAG_03811","SJAG_03813","SJAG_03743","SJAG_01731","SJAG_06022","SJAG_04233","SJAG_03180","SJAG_02796","SJAG_04362","SJAG_00231","SJAG_03562","SJAG_02206","SJAG_01875","SJAG_00074","SJAG_05200","SJAG_04579","SJAG_00706","SJAG_02370","SJAG_03626","SJAG_04842","SJAG_00353","SJAG_00853","SJAG_01254","SJAG_04449","SJAG_05209","SJAG_03723","SJAG_05010","SJAG_01945","SJAG_02247","SJAG_04865","SJAG_04970","SJAG_01955","SJAG_01404","SJAG_02897","SJAG_03985","SJAG_03276","SJAG_02763","SJAG_02107","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56991,57069,57151,57799,57870,58251,58599,58723,58836,59283,59605,60481,61128,61282,61537,61786,61862,62401,62425,62443,63336,63386,63672,63714,64086,64390,65388,65526,66204,66797,66814,67395,67729,68815,69082,69297,69511,69871,70233,70427,72742,79460,81305,81718,90536,92160,93315,93412,93533,99096,101750,103019,104858,105681,107854,112114],"is_not":false,"summary":null,"term":"GO:0000287"}]},"cv_name":"molecular_function","definition":"Binding to a magnesium (Mg) ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00074":null,"SJAG_00134":null,"SJAG_00231":null,"SJAG_00353":null,"SJAG_00381":null,"SJAG_00402":null,"SJAG_00461":null,"SJAG_00502":null,"SJAG_00669":null,"SJAG_00706":null,"SJAG_00853":null,"SJAG_01209":null,"SJAG_01254":null,"SJAG_01351":null,"SJAG_01404":null,"SJAG_01648":null,"SJAG_01731":null,"SJAG_01875":null,"SJAG_01945":null,"SJAG_01955":null,"SJAG_02107":null,"SJAG_02206":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02370":null,"SJAG_02679":null,"SJAG_02734":null,"SJAG_02763":null,"SJAG_02796":null,"SJAG_02897":null,"SJAG_03096":null,"SJAG_03180":null,"SJAG_03276":null,"SJAG_03562":null,"SJAG_03626":null,"SJAG_03723":null,"SJAG_03743":null,"SJAG_03811":null,"SJAG_03813":null,"SJAG_03985":null,"SJAG_04233":null,"SJAG_04362":null,"SJAG_04449":null,"SJAG_04487":null,"SJAG_04579":null,"SJAG_04747":null,"SJAG_04842":null,"SJAG_04865":null,"SJAG_04882":null,"SJAG_04970":null,"SJAG_04972":null,"SJAG_05010":null,"SJAG_05200":null,"SJAG_05209":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"magnesium ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"Mg binding","type":"exact"},{"name":"magnesium binding","type":"exact"}],"termid":"GO:0000287","terms_by_termid":{"GO:0000287":null}}


id: MONDO:0016851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome X","secondary_identifiers":["GARD:20783","Orphanet:261519","icd11.foundation:573923144","UMLS:C5191056","MEDGEN:1673747"],"synonyms":[{"name":"UPD(X)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type X","type":"exact"}],"termid":"MONDO:0016851","xrefs":{"Monarch":{"xref_id":"0016851"}}}


id: PBO:0041938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 6","termid":"PBO:0041938"}


id: GO:1901857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular respiration.","definition_xrefs":["GOC:yaf","PMID:23150719","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"positively_regulates","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of cellular respiration","synonyms":[{"name":"activation of cellular respiration","type":"narrow"},{"name":"activation of oxidative metabolic process","type":"exact"},{"name":"activation of oxidative metabolism","type":"exact"},{"name":"activation of respiration","type":"broad"},{"name":"positive regulation of oxidative metabolic process","type":"exact"},{"name":"positive regulation of oxidative metabolism","type":"exact"},{"name":"positive regulation of respiration","type":"broad"},{"name":"up regulation of cellular respiration","type":"exact"},{"name":"up regulation of oxidative metabolic process","type":"exact"},{"name":"up regulation of oxidative metabolism","type":"exact"},{"name":"up regulation of respiration","type":"broad"},{"name":"up-regulation of cellular respiration","type":"exact"},{"name":"up-regulation of oxidative metabolic process","type":"exact"},{"name":"up-regulation of oxidative metabolism","type":"exact"},{"name":"up-regulation of respiration","type":"broad"},{"name":"upregulation of cellular respiration","type":"exact"},{"name":"upregulation of oxidative metabolic process","type":"exact"},{"name":"upregulation of oxidative metabolism","type":"exact"},{"name":"upregulation of respiration","type":"broad"}],"termid":"GO:1901857"}


id: GO:0099043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a macromolecular complex during clathrin-dependent endocytosis that connects the assembling clathrin coat to the proteins and/or lipoproteins to be transported in an endocytic vesicle. This complex includes a receptor and an adaptor protein that links the receptor to the clathrin coat.","definition_xrefs":["GOC:lb","GOC:dos","PMID:21779028","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle cargo loading","termid":"GO:0035652"},{"relation_name":"part_of","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"cargo loading involved in clathrin-dependent endocytosis","termid":"GO:0099043"}


id: GO:1905683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of a peroxisome into its constituent components.","definition_xrefs":["GOC:autophagy","GO_REF:0000079","GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome disassembly (obsolete GO:1905683)","termid":"GO:1905683"}


id: PBO:0055597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3033","termid":"PBO:0055597"}


id: GO:0035181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Digging into the substrate by non-feeding larvae in search for food-free sites suitable for pupation.","definition_xrefs":["PMID:12848927","PMID:12848939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval locomotory behavior","termid":"GO:0008345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval burrowing behavior","synonyms":[{"name":"larval burrowing behaviour","type":"exact"}],"termid":"GO:0035181"}


id: MONDO:0008268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly-myopia syndrome is an exceedingly rare autosomal dominant developmental anomaly reported in 1986 in nine individuals among four generations of the same family. The syndrome is characterized clinically by four-limb postaxial polydactyly and progressive myopia. There have been no further descriptions in the literature since 1986.","definition_xrefs":["Orphanet:2917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly-myopia syndrome","secondary_identifiers":["ICD9:625.4","OMIM:174310","MEDGEN:357424","UMLS:C1868117","MESH:C536331","SCTID:82639001","GARD:4413"],"synonyms":[{"name":"Czeizel Brooser syndrome","type":"related"},{"name":"Czeizel-Brooser syndrome","type":"exact"},{"name":"PMS","type":"related"},{"name":"polydactyly myopia syndrome","type":"related"},{"name":"polydactyly, postaxial, with progressive myopia","type":"related"},{"name":"polydactyly-myopia syndrome","type":"exact"},{"name":"postaxial polydactyly with progressive myopia","type":"related"},{"name":"postaxial polydactyly-progressive myopia syndrome","type":"related"}],"termid":"MONDO:0008268","xrefs":{"Monarch":{"xref_id":"0008268"}}}


id: MONDO:0003502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare squamous cell carcinoma that arises from the ureter.","definition_xrefs":["NCIT:C6154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"ureter carcinoma","termid":"MONDO:0006481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ureter squamous cell carcinoma","secondary_identifiers":["DOID:5539","UMLS:C1336879","MEDGEN:237032"],"synonyms":[{"name":"epidermoid carcinoma of the ureter","type":"exact"},{"name":"epidermoid carcinoma of ureter","type":"exact"},{"name":"squamous cell carcinoma of the ureter","type":"exact"},{"name":"squamous cell carcinoma of ureter","type":"exact"},{"name":"ureter epidermoid carcinoma","type":"exact"},{"name":"ureter squamous cell carcinoma","type":"exact"},{"name":"ureteral epidermoid carcinoma","type":"exact"},{"name":"ureteral squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003502","xrefs":{"Monarch":{"xref_id":"0003502"}}}


id: PBO:0066907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 208","termid":"PBO:0066907"}


id: PBO:0043220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin binding box of aftiphilin containing 1","termid":"PBO:0043220"}


id: PBO:0063936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIMREG pseudogene 1","termid":"PBO:0063936"}


id: MONDO:0005746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by the nematode Enterobius vermicularis; it is characterized predominantly by perianal pruritus.","definition_xrefs":["NCIT:C128396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enterobiasis","secondary_identifiers":["MESH:D017229","MEDGEN:88540","UMLS:C0086227","ICD9:127.4","SCTID:266162007","DOID:7457","icd11.foundation:580098307","ICD10CM:B80","EFO:0007254"],"synonyms":[{"name":"Enterobius vermicularis caused disease or disorder","type":"exact"},{"name":"Enterobius vermicularis disease or disorder","type":"exact"},{"name":"Enterobius vermicularis infection","type":"related"},{"name":"Enterobius vermicularis infectious disease","type":"exact"},{"name":"Oxyuris vermicularis infection","type":"exact"},{"name":"oxyuriasis","type":"related"},{"name":"pinworm infection","type":"related"},{"name":"threadworm infection","type":"exact"}],"termid":"MONDO:0005746","xrefs":{"Monarch":{"xref_id":"0005746"}}}


id: PBO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease MRP complex subunit (predicted)","termid":"PBO:0002288"}


id: MONDO:0016711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A histological variant of medulloblastoma, an embryonic malignancy, often located in one of the cerebellar hemispheres, occurring most frequently in adults and manifesting with symptoms such as vomiting and headache.","definition_xrefs":["Orphanet:251863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoplastic/nodular medulloblastoma","secondary_identifiers":["ICDO:9471/3","MEDGEN:148272","NCIT:C4956","UMLS:C0751291","GARD:17215","ONCOTREE:DMBL"],"synonyms":[{"name":"Desmoplastic medulloblastoma","type":"exact"},{"name":"desmoplastic medulloblastoma","type":"exact"},{"name":"desmoplastic nodular medulloblastoma","type":"exact"},{"name":"desmoplastic/nodular medulloblastoma","type":"exact"}],"termid":"MONDO:0016711","xrefs":{"Monarch":{"xref_id":"0016711"}}}


id: PBO:0075016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-27","termid":"PBO:0075016"}


id: PBO:0041231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 53","termid":"PBO:0041231"}


id: GO:1905269
data:
  {"annotated_genes":["SJAG_02592","SJAG_02342","SJAG_00142","SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[93037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[93038,96240,112317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chromatin organization.","definition_xrefs":["GOC:vw","GOC:TermGenie","PMID:654321","GO_REF:0000058","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"positive regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0045799","GO:1903310"],"synonyms":[{"name":"activation of chromatin assembly or disassembly","type":"narrow"},{"name":"activation of chromatin organisation","type":"narrow"},{"name":"activation of chromatin organization","type":"narrow"},{"name":"activation of establishment or maintenance of chromatin architecture","type":"narrow"},{"name":"positive regulation of chromatin assembly or disassembly","type":"related"},{"name":"positive regulation of chromatin assembly/disassembly","type":"related"},{"name":"positive regulation of chromatin modification","type":"related"},{"name":"positive regulation of chromatin organisation","type":"exact"},{"name":"positive regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"stimulation of chromatin assembly or disassembly","type":"narrow"},{"name":"up regulation of chromatin assembly or disassembly","type":"related"},{"name":"up regulation of chromatin organisation","type":"exact"},{"name":"up regulation of chromatin organization","type":"exact"},{"name":"up regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"up-regulation of chromatin assembly or disassembly","type":"related"},{"name":"up-regulation of chromatin organisation","type":"exact"},{"name":"up-regulation of chromatin organization","type":"exact"},{"name":"up-regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"upregulation of chromatin assembly or disassembly","type":"exact"},{"name":"upregulation of chromatin organisation","type":"exact"},{"name":"upregulation of chromatin organization","type":"exact"},{"name":"upregulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1905269","terms_by_termid":{"GO:0031453":null,"GO:0090053":null,"GO:0090055":null}}


id: GO:1902768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoprenoid via 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["PMID:23746261","GO_REF:0000092","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isoprenoid biosynthetic process via 1-deoxy-D-xylulose 5-phosphate","synonyms":[{"name":"isoprenoid anabolism via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid biosynthesis via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid formation via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid synthesis via 1-deoxy-D-xylulose 5-phosphate","type":"exact"}],"termid":"GO:1902768"}


id: MONDO:0018633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"20q11.2 microdeletion syndrome is a rare, genetic, syndromic intellectual disability characterized by psychomotor delay, hypotonia, feeding difficulties, failure to thrive, anomalies of the hands and feet (clinodactyly, camptodactyly, brachydactyly, feet malposition), and craniofacial dysmorphism. Associated prenatal growth retardation, and gastrointestinal, heart and eye anomalies have been reported.","definition_xrefs":["Orphanet:444051"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 20","termid":"MONDO:0016918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20q11.2 microdeletion syndrome","secondary_identifiers":["UMLS:C5680063","MEDGEN:1810637","GARD:21859"],"synonyms":[{"name":"Del(20)(q11.2)","type":"exact"},{"name":"monosomy 20q11","type":"exact"}],"termid":"MONDO:0018633","xrefs":{"Monarch":{"xref_id":"0018633"}}}


id: PBO:0000127
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Srb9","termid":"PBO:0000127"}


id: PBO:0053580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 603","termid":"PBO:0053580"}


id: FYPO:0000567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"decreased duration of septum assembly","synonyms":[{"name":"decreased division septum formation involved in mitotic cytokinesis","type":"related"},{"name":"decreased duration of division septum assembly","type":"exact"},{"name":"decreased duration of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"decreased duration of septation","type":"broad"},{"name":"decreased duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"decreased duration of septum assembly during vegetative growth","type":"exact"},{"name":"decreased septation","type":"related"},{"name":"decreased septum formation","type":"related"},{"name":"reduced duration of septum assembly","type":"exact"},{"name":"septum formation: decreased","type":"broad"}],"termid":"FYPO:0000567"}


id: PBO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"present at telomere ends","termid":"PBO:0000053"}


id: PBO:0059774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature T cell proliferation 1","termid":"PBO:0059774"}


id: PBO:0053565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 578","termid":"PBO:0053565"}


id: MONDO:1010994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Olivopontocerebellar atrophy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olivopontocerebellar atrophy, non-human animal","termid":"MONDO:1010234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olivopontocerebellar atrophy, domestic cat","secondary_identifiers":["OMIA:000740-9685"],"termid":"MONDO:1010994","xrefs":{"Monarch":{"xref_id":"1010994"}}}


id: PBO:0054190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1565","termid":"PBO:0054190"}


id: GO:0047620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acylglycerol = ADP + acyl-sn-glycerol 3-phosphate.","definition_xrefs":["MetaCyc:ACYLGLYCEROL-KINASE-RXN","EC:2.7.1.94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"acylglycerol kinase activity","secondary_identifiers":["Reactome:R-HSA-5696074","RHEA:19293"],"synonyms":[{"name":"ATP:acylglycerol 3-phosphotransferase activity","type":"related"},{"name":"MGK","type":"related"},{"name":"monoacylglycerol kinase (phosphorylating)","type":"related"},{"name":"monoacylglycerol kinase activity","type":"related"},{"name":"monoglyceride kinase activity","type":"related"},{"name":"monoglyceride phosphokinase activity","type":"related"},{"name":"sn-2-monoacylglycerol kinase activity","type":"related"}],"termid":"GO:0047620"}


id: FYPO:0004319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}


id: PBO:0043466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 6 like","termid":"PBO:0043466"}


id: MONDO:0000632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the uterine corpus or the cervix. Representative examples include leiomyoma, adenomyoma, and endocervical polyp.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign female reproductive system neoplasm","termid":"MONDO:0000624"},{"relation_name":"is_a","term_name":"tumor of uterus","termid":"MONDO:0021353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine benign neoplasm","secondary_identifiers":["DOID:0060095","ICD9:219.8","ICD9:219.9","NCIT:C3609","SCTID:92470003","MEDGEN:57809","UMLS:C0153999"],"synonyms":[{"name":"Uterous neoplasms, benign","type":"exact"},{"name":"Uterous tumors, benign","type":"exact"},{"name":"benign neoplasm of the uterus","type":"exact"},{"name":"benign neoplasm of uterus","type":"exact"},{"name":"benign tumor of the uterus","type":"exact"},{"name":"benign tumor of uterus","type":"exact"},{"name":"benign tumour of the uterus","type":"exact"},{"name":"benign tumour of uterus","type":"exact"},{"name":"benign uterine neoplasm","type":"exact"},{"name":"benign uterine neoplasms","type":"exact"},{"name":"benign uterine tumor","type":"exact"},{"name":"benign uterine tumors","type":"exact"},{"name":"benign uterine tumour","type":"exact"},{"name":"benign uterine tumours","type":"exact"},{"name":"benign uterus neoplasm","type":"exact"},{"name":"benign uterus neoplasms","type":"exact"},{"name":"benign uterus tumor","type":"exact"},{"name":"benign uterus tumors","type":"exact"},{"name":"benign uterus tumour","type":"exact"},{"name":"benign uterus tumours","type":"exact"},{"name":"uterine neoplasms, benign","type":"exact"},{"name":"uterine tumors, benign","type":"exact"},{"name":"uterus benign neoplasm","type":"exact"}],"termid":"MONDO:0000632","xrefs":{"Monarch":{"xref_id":"0000632"}}}


id: MONDO:0013004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotonia, seizures, and precocious puberty","secondary_identifiers":["OMIM:612777","MEDGEN:411248","MESH:C567566","UMLS:C2748586"],"synonyms":[{"name":"hypotonia, seizures, and precocious puberty","type":"exact"}],"termid":"MONDO:0013004","xrefs":{"Monarch":{"xref_id":"0013004"}}}


id: MONDO:0003199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the anus","direct_ancestors":[{"relation_name":"is_a","term_name":"anus cancer","termid":"MONDO:0001879"},{"relation_name":"is_a","term_name":"rectal carcinoma","termid":"MONDO:0044937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anal carcinoma","secondary_identifiers":["DOID:4908","MEDGEN:76006","NCIT:C9291","UMLS:C0279637","SCTID:448315008"],"synonyms":[{"name":"Ca anus","type":"broad"},{"name":"anal cancer","type":"broad"},{"name":"anal carcinoma","type":"exact"},{"name":"anus carcinoma","type":"exact"},{"name":"cancer of anus","type":"broad"},{"name":"cancer of the anus","type":"broad"},{"name":"carcinoma of anus","type":"exact"},{"name":"carcinoma of the anus","type":"exact"}],"termid":"MONDO:0003199","xrefs":{"Monarch":{"xref_id":"0003199"}}}


id: PBO:0047410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 48","termid":"PBO:0047410"}


id: PBO:0061876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 1","termid":"PBO:0061876"}


id: GO:1901551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell development.","definition_xrefs":["PMID:19470579","GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of endothelial cell differentiation","termid":"GO:0045602"},{"relation_name":"is_a","term_name":"regulation of endothelial cell development","termid":"GO:1901550"},{"relation_name":"negatively_regulates","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell development","synonyms":[{"name":"down regulation of endothelial cell development","type":"exact"},{"name":"down-regulation of endothelial cell development","type":"exact"},{"name":"downregulation of endothelial cell development","type":"exact"},{"name":"inhibition of endothelial cell development","type":"narrow"}],"termid":"GO:1901551"}


id: PR:O74432
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Golgi to ER traffic protein 4 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi to ER traffic protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.12c","secondary_identifiers":["UniProtKB:O74432"],"synonyms":[{"name":"Spom972h-GET4","type":"exact"}],"termid":"PR:O74432"}


id: PBO:0017715
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF9","termid":"PBO:0017715"}


id: PBO:0078741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 2 homolog B","termid":"PBO:0078741"}


id: PBO:0082199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoin permease; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0082199"}


id: PBO:0083647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongin A; F-box protein that forms a heterodimer with Elc1p and is required for ubiquitin-dependent degradation of the RNA Polymerase II subunit Rpo21p; subunit of the Elongin-Cullin-Socs (ECS) ligase complex","termid":"PBO:0083647"}


id: PBO:0065360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1 pseudogene 1","termid":"PBO:0065360"}


id: GO:2001303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"lipoxin biosynthetic process","termid":"GO:2001301"},{"relation_name":"is_a","term_name":"lipoxin A4 metabolic process","termid":"GO:2001302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"lipoxin A4 biosynthetic process","synonyms":[{"name":"LXA4 anabolism","type":"exact"},{"name":"LXA4 biosynthesis","type":"exact"},{"name":"LXA4 biosynthetic process","type":"exact"},{"name":"LXA4 formation","type":"exact"},{"name":"LXA4 synthesis","type":"exact"},{"name":"lipoxin A4 anabolism","type":"exact"},{"name":"lipoxin A4 biosynthesis","type":"exact"},{"name":"lipoxin A4 formation","type":"exact"},{"name":"lipoxin A4 synthesis","type":"exact"}],"termid":"GO:2001303"}


id: PATO:0001137
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001137 ig g concentration (obsolete PATO:0001137)","termid":"PATO:0001137"}


id: MONDO:0013373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the PSEN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1V","secondary_identifiers":["DOID:0110427","OMIM:613697","UMLS:C3150958","MESH:C566856","MEDGEN:462308","GARD:15690"],"synonyms":[{"name":"CMD1V","type":"exact"},{"name":"PSEN2 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1V","type":"related"},{"name":"cardiomyopathy, dilated, type 1V","type":"exact"},{"name":"dilated cardiomyopathy type 1V","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in PSEN2","type":"exact"}],"termid":"MONDO:0013373","xrefs":{"Monarch":{"xref_id":"0013373"}}}


id: MONDO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ischemic bone disease (obsolete MONDO:0000835)","termid":"MONDO:0000835","xrefs":{"Monarch":{"xref_id":"0000835"}}}


id: PBO:0086705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mCherry fusion protein localizes to the cytosol","termid":"PBO:0086705"}


id: PBO:0075142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPB2 pseudogene 1","termid":"PBO:0075142"}


id: GO:0140964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of auxin within a cell.","definition_xrefs":["PMID:22314799","PMID:19506555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular auxin homeostasis","synonyms":[{"name":"auxin homeostasis","type":"broad"},{"name":"cellular auxin homeostasis","type":"exact"}],"termid":"GO:0140964"}


id: PR:Q10223
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.01","synonyms":[{"name":"Spom972h-pof14","type":"exact"}],"termid":"PR:Q10223"}


id: GO:1900088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inositol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22307851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"inositol biosynthetic process","termid":"GO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of inositol biosynthetic process","synonyms":[{"name":"regulation of inositol anabolism","type":"exact"},{"name":"regulation of inositol biosynthesis","type":"exact"},{"name":"regulation of inositol formation","type":"exact"},{"name":"regulation of inositol synthesis","type":"exact"},{"name":"regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"regulation of vitamin Bh biosynthetic process","type":"exact"}],"termid":"GO:1900088"}


id: PBO:0039783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 10","termid":"PBO:0039783"}


id: MONDO:0015304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arachnoiditis (ARC) is a chronic inflammation of the arachnoid layer of the meninges, of which adhesive arachnoiditis is the most severe form, characterized by debilitating, intractable neurogenic back and limb pain and a range of other neurological problems.","definition_xrefs":["Orphanet:137817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious meningitis","termid":"MONDO:0004796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachnoiditis","secondary_identifiers":["icd11.foundation:414817254","MESH:D001100","NORD:800","SCTID:13980006","DOID:12156","MedDRA:10003074","NCIT:C37913","GARD:5839","UMLS:C0003708","MEDGEN:8175"],"synonyms":[{"name":"adhesive arachnoiditis","type":"exact"},{"name":"arachnoid mater inflammation","type":"exact"},{"name":"chronic arachnoiditis","type":"exact"},{"name":"inflammation of arachnoid mater","type":"exact"}],"termid":"MONDO:0015304","xrefs":{"Monarch":{"xref_id":"0015304"}}}


id: PBO:0083628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase targeting centromere-binding protein Cse4p; mediates polyubiquitination and degradation of histone H3 variant Cse4p; ubiquitination of Cse4p may be antagonized by Scm3p; interacts with the FACT complex preventing mislocalization of Cse4p to euchromatin independent of Slx5p; formyl-methionine/N-recognin component of N-end rule pathway mediating destruction of formylated cytosolic proteins elevated in response to starvation or stationary phase entry","termid":"PBO:0083628"}


id: PBO:0084806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; MLO1 is not an essential gene","termid":"PBO:0084806"}


id: GO:1905089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of type 2 mitophagy.","definition_xrefs":["PMID:26942284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitophagy","termid":"GO:1901524"},{"relation_name":"regulates","term_name":"type 2 mitophagy","termid":"GO:0061734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"regulation of type 2 mitophagy","synonyms":[{"name":"regulation of PRKN-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"regulation of Park2-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"}],"termid":"GO:1905089"}


id: PBO:0039006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALF transcription elongation factor 2","termid":"PBO:0039006"}


id: PBO:0082469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calmodulin-binding actin-associated protein; roles in endocytic membrane tabulation and constriction, and exocytosis; N-BAR domain protein that interacts with Rvs161p to regulate actin cytoskeleton, endocytosis, and viability following starvation or osmotic stress; recruited to bud tips by Gyl1p and Gyp5p during polarized growth; homolog of mammalian amphiphysin; necessary for efficient trafficking of CoQ6 to mitochondria","termid":"PBO:0082469"}


id: PBO:0028564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_intergenic_meiotic_recombination","termid":"PBO:0028564"}


id: MONDO:0006869
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007681"}]},"cv_name":"mondo","definition":"Goiter characterized by discrete tissue mass(es) that may or may not produce thyroid hormones.","definition_xrefs":["NCIT:C131437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"is_obsolete":false,"name":"nodular goiter","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10018495","MEDGEN:42271","UMLS:C0018023","EFO:1001062","SCTID:419153005","HP:0005994","MESH:D006044","DOID:13197"],"synonyms":[{"name":"goiter, nodular","type":"exact"},{"name":"nodular goiter","type":"exact"},{"name":"nodular goiter (disease)","type":"exact"},{"name":"nodular goitre (disease)","type":"exact"},{"name":"nodular goitre NOS","type":"related"}],"termid":"MONDO:0006869","terms_by_termid":{"MONDO:0007681":null},"xrefs":{"Monarch":{"xref_id":"0006869"}}}


id: GO:0001406
data:
  {"annotated_genes":["SJAG_05325","SJAG_03644","SJAG_00232"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104517,104518,104519],"is_not":false,"summary":null,"term":"GO:0001406"}]},"cv_name":"molecular_function","definition":"Enables the transfer of glycerophosphodiesters from one side of a membrane to the other. Glycerophosphodiesters are small molecules composed of glycerol-3-phosphate and an alcohol, for example, glycerophosphoinositol.","definition_xrefs":["GOC:mcc","PMID:12912892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_03644":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glycerophosphodiester transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001406","terms_by_termid":{"GO:0001406":null}}


id: MONDO:0020065
data:
  {"annotated_genes":["SJAG_04840","SJAG_03900"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030676"},{"annotations":[87682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010747"}]},"cv_name":"mondo","definition":"A dystonia that is combined with another movement disorder (e.g., myoclonus, parkinsonism).","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03900":null,"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"combined dystonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842879","GARD:19432","Orphanet:98203","UMLS:C5680244"],"synonyms":[{"name":"dystonia-plus syndrome","type":"exact"}],"termid":"MONDO:0020065","terms_by_termid":{"MONDO:0010747":null,"MONDO:0030676":null},"xrefs":{"Monarch":{"xref_id":"0020065"}}}


id: GO:0043031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of macrophage activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of macrophage activation","termid":"GO:0043030"},{"relation_name":"negatively_regulates","term_name":"macrophage activation","termid":"GO:0042116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage activation","synonyms":[{"name":"down regulation of macrophage activation","type":"exact"},{"name":"down-regulation of macrophage activation","type":"exact"},{"name":"downregulation of macrophage activation","type":"exact"},{"name":"inhibition of macrophage activation","type":"narrow"},{"name":"negative regulation of macrophage polarization","type":"exact"}],"termid":"GO:0043031"}


id: MONDO:1012193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thalamic-cerebellar neuropathy, non-human animal","termid":"MONDO:1011854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thalamic-cerebellar neuropathy, sheep","secondary_identifiers":["OMIA:000723-9940"],"termid":"MONDO:1012193","xrefs":{"Monarch":{"xref_id":"1012193"}}}


id: SO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A purine-rich sequence in the group I introns which determines the locations of the splice sites in group I intron splicing and has catalytic activity.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"},{"relation_name":"part_of","term_name":"group_I_intron","termid":"SO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_guide_sequence","synonyms":[{"name":"IGS","type":"exact"},{"name":"internal guide sequence","type":"exact"}],"termid":"SO:0001016"}


id: PBO:0083960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General splicing factor; required for stable U2 snRNP binding to primary transcripts; essential for the first step of splicing; component of the pre-catalytic spliceosome complex containing Cef1p; similar to S. pombe Cwf24p","termid":"PBO:0083960"}


id: PBO:0056136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and CTNNBIP1 domain containing","termid":"PBO:0056136"}


id: GO:0099187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures and their associated proteins in the presynaptic cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"part_of","term_name":"presynapse organization","termid":"GO:0099172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"presynaptic cytoskeleton organization","termid":"GO:0099187"}


id: GO:0141134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont subverts a signal transduction pathway in the host organism by binding to and enhancing the activation of the receptor of the pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:10221874","PMID:18563600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host signal transduction pathway via agonism of host cell surface receptor","synonyms":[{"name":"symbiont-mediated perturbation of host signal transduction pathway via antagonism of host cell surface receptor","type":"broad"}],"termid":"GO:0141134"}


id: FYPO:0007618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of protein from the nucleus begins later than normal. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein export from nucleus during vegetative growth","termid":"FYPO:0000345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein export from nucleus","synonyms":[{"name":"delayed onset of protein export from nucleus during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein export from nucleus during vegetative growth","type":"exact"},{"name":"delayed protein export from nucleus","type":"exact"}],"termid":"FYPO:0007618"}


id: PBO:0043716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 4","termid":"PBO:0043716"}


id: MONDO:0044337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm characterized by the presence of atypical mesenchymal-stromal cells. Representative examples include endometrial stromal sarcoma and prostate stromal sarcoma.","definition_xrefs":["NCIT:C6926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"stromal sarcoma","secondary_identifiers":["UMLS:C1370723","MEDGEN:235091","ICDO:8935/3"],"synonyms":[{"name":"stromal sarcoma","type":"exact"},{"name":"stromal sarcoma, malignant","type":"exact"},{"name":"stromal tumor, malignant","type":"exact"}],"termid":"MONDO:0044337","xrefs":{"Monarch":{"xref_id":"0044337"}}}


id: GO:0052686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: perillic acid + CoA-SH + ATP = H2O + AMP + diphosphate + perillyl-CoA.","definition_xrefs":["PMID:24952578","KEGG_REACTION:R06368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"perillic acid-CoA ligase (AMP-forming) activity","synonyms":[{"name":"perillic acid:CoA ligase (AMP-forming) activity","type":"exact"},{"name":"perillyl-CoA synthetase activity","type":"broad"}],"termid":"GO:0052686"}


id: PBO:0046071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 2","termid":"PBO:0046071"}


id: FYPO:0005707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the equatorial microtubule organizing center (eMTOC) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"},{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to eMTOC","synonyms":[{"name":"normal protein localisation to eMTOC","type":"exact"},{"name":"normal protein localization to eMTOC during mitotic cell cycle","type":"related"},{"name":"normal protein localization to eMTOC during vegetative growth","type":"exact"},{"name":"normal protein localization to equatorial microtubule organizing center","type":"exact"}],"termid":"FYPO:0005707"}


id: GO:0075241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zoospore formation, a process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zoospore formation","termid":"GO:0075240"},{"relation_name":"is_a","term_name":"positive regulation of sporangiospore formation","termid":"GO:0075287"},{"relation_name":"positively_regulates","term_name":"zoospore formation","termid":"GO:0075239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zoospore formation","termid":"GO:0075241"}


id: GO:0061034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the olfactory bulb mitral cell layer over time from its initial formation until its mature state. The mitral cell layer is composed of pyramidal neurons whose cell bodies are located between the granule cell layer and the plexiform layer.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"olfactory bulb development","termid":"GO:0021772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb mitral cell layer development","termid":"GO:0061034"}


id: MONDO:0020453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Partial pulmonary venous return (PAPVR) is a form of congenital pulmonary venous return where one or a few of the pulmonary veins drain into the right atrium or one of its tributaries instead of the left atrium. Some patients can be asymptomatic while others can manifest with non-specific signs such as frequent respiratory infections, fatigue and exertional dyspnea.","definition_xrefs":["Orphanet:99124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary venous return anomaly","termid":"MONDO:0017705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital partial pulmonary venous return anomaly","secondary_identifiers":["SCTID:68237008","MEDGEN:450995","NCIT:C99004","UMLS:C0158634","icd11.foundation:1041585584","NANDO:2200272","GARD:19665"],"synonyms":[{"name":"Partial anomalous pulmonary Venous connection","type":"exact"},{"name":"Partial anomalous pulmonary Venous return","type":"exact"}],"termid":"MONDO:0020453","xrefs":{"Monarch":{"xref_id":"0020453"}}}


id: PBO:0066078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 6","termid":"PBO:0066078"}


id: GO:1990881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of DNA damage.","definition_xrefs":["PMID:26150418"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to DNA damage (obsolete GO:1990881)","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"}],"termid":"GO:1990881"}


id: MONDO:0005691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by viruses of the genus cardiovirus, family picornaviridae.","definition_xrefs":["MESH:D018188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Picornaviridae infectious disease","termid":"MONDO:0005914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiovirus infectious disease","secondary_identifiers":["EFO:0007194","MEDGEN:60193","UMLS:C0206617"],"synonyms":[{"name":"Cardiovirus infection","type":"related"},{"name":"infection, Cardiovirus","type":"related"},{"name":"infections, Cardiovirus","type":"related"}],"termid":"MONDO:0005691","xrefs":{"Monarch":{"xref_id":"0005691"}}}


id: MONDO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonspecific term referring to impaired vision. Major subcategories include stimulus deprivation-induced amblyopia and toxic amblyopia. Stimulus deprivation-induced amblyopia is a developmental disorder of the visual cortex. A discrepancy between visual information received by the visual cortex from each eye results in abnormal cortical development. strabismus and refractive errors may cause this condition. Toxic amblyopia is a disorder of the optic nerve which is associated with alcoholism, tobacco smoking, and other toxins and as an adverse effect of the use of some medications.","definition_xrefs":["MESH:D000550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amblyopia","termid":"MONDO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppression amblyopia","secondary_identifiers":["ICD9:368.01","MEDGEN:152911","SCTID:35600002","DOID:10375","UMLS:C0750903"],"synonyms":[{"name":"strabismic amblyopia","type":"exact"}],"termid":"MONDO:0001019","xrefs":{"Monarch":{"xref_id":"0001019"}}}


id: PBO:0060490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nanos C2HC-type zinc finger 1","termid":"PBO:0060490"}


id: GO:0052802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitroimidazoles, imidazole derivatives with a nitro group attached to one ring.","definition_xrefs":["PMID:16387854","PMID:19039139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitroimidazole metabolic process","synonyms":[{"name":"nitroimidazole metabolism","type":"exact"}],"termid":"GO:0052802"}


id: MONDO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the radial nerve. Clinical features include weakness of elbow extension, elbow flexion, supination of the forearm, wrist and finger extension, and thumb abduction. Sensation may be impaired over regions of the dorsal forearm. Common sites of compression or traumatic injury include the axilla and radial groove of the humerus.","definition_xrefs":["MESH:D020425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"radial neuropathy","secondary_identifiers":["DOID:12171","UMLS:C0748226","MEDGEN:148185","SCTID:16644004"],"synonyms":[{"name":"peripheral neuropathy of radial nerve","type":"exact"},{"name":"radial nerve peripheral neuropathy","type":"exact"}],"termid":"MONDO:0001459","xrefs":{"Monarch":{"xref_id":"0001459"}}}


id: GO:2001161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K79 methylation.","definition_xrefs":["PMID:12876294"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K79 methylation (obsolete GO:2001161)","synonyms":[{"name":"negative regulation of histone H3 K79 methylation","type":"exact"},{"name":"negative regulation of histone H3K79me","type":"exact"},{"name":"negative regulation of histone lysine H3 K79 methylation","type":"exact"}],"termid":"GO:2001161"}


id: PBO:0068632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 12, pseudogene","termid":"PBO:0068632"}


id: PBO:0038886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase activating polypeptide 1","termid":"PBO:0038886"}


id: PBO:0039701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis inhibitor 5 pseudogene 2","termid":"PBO:0039701"}


id: GO:0140588
data:
  {"annotated_genes":["SJAG_05019","SJAG_01067","SJAG_02606","SJAG_01831","SJAG_00796","SJAG_00682","SJAG_03926","SJAG_03418"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89640,91517,92770,98125,109690,109774,112526,118869],"is_not":false,"summary":null,"term":"GO:0140588"}]},"cv_name":"biological_process","definition":"A chromatin organization process that starts with the loading of an extrusion motor (by an SMC family complex) onto the chromatin, followed by chromatin extrusion that stops at loop anchoring sites on the chromosome.","definition_xrefs":["PMID:32213323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00682":null,"SJAG_00796":null,"SJAG_01067":null,"SJAG_01831":null,"SJAG_02606":null,"SJAG_03418":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"chromatin looping","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA loop extrusion","type":"exact"},{"name":"DNA looping","type":"broad"},{"name":"chromatin folding","type":"related"},{"name":"chromatin loop assembly","type":"exact"}],"termid":"GO:0140588","terms_by_termid":{"GO:0140588":null}}


id: PBO:0048537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8 pseudogene 3","termid":"PBO:0048537"}


id: PR:O74471
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox13 gene.","definition_xrefs":["UniProtKB:O74471","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6A, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.09c","synonyms":[{"name":"Spom972h-cox13","type":"exact"},{"name":"cytochrome c oxidase polypeptide VIa (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74471"}


id: FYPO:0002456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is curved along the long axis, and contains one or more abnormal septa. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"},{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"viable curved vegetative cell with abnormal septum","synonyms":[{"name":"curved viable cell with abnormal septum","type":"exact"},{"name":"viable curved abnormally septated vegetative cell","type":"exact"},{"name":"viable curved cell with abnormal septum during vegetative growth","type":"exact"},{"name":"viable curved vegetative cell with abnormal septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002456"}


id: GO:0047013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholate + NADP+ = 3-alpha,7-alpha-dihydroxy-12-oxo-5-beta-cholanate + H+ + NADPH.","definition_xrefs":["RHEA:14129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cholate 12-alpha dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.176","KEGG_REACTION:R02793","MetaCyc:1.1.1.176-RXN"],"synonyms":[{"name":"12-alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12alpha-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"12alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12alpha-hydroxysteroid:NADP+ 12-oxidoreductase activity","type":"broad"},{"name":"NAD-dependent 12alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"NADP-12alpha-hydroxysteroid dehydrogenase activity","type":"broad"}],"termid":"GO:0047013"}


id: GO:0009527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the plastid envelope.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle outer membrane","termid":"GO:0031968"},{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid outer membrane","termid":"GO:0009527"}


id: SO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which increases the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_level_variant","termid":"SO:0001553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_translational_product_level","synonyms":[{"name":"increase translational product level","type":"exact"}],"termid":"SO:0001556"}


id: PBO:0055844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRIG3 divergent transcript","termid":"PBO:0055844"}


id: PBO:0088372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiprotein bridging factor Mbf1","termid":"PBO:0088372"}


id: PBO:0017022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","termid":"PBO:0017022"}


id: GO:1903467
data:
  {"annotated_genes":["SJAG_03048","SJAG_02162","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99668,104286,110860],"is_not":false,"summary":null,"term":"GO:1903467"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication initiation involved in mitotic DNA replication.","definition_xrefs":["GOC:TermGenie","PMID:1234","GO_REF:0000058","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication initiation","termid":"GO:0032297"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle DNA replication","termid":"GO:1903464"},{"relation_name":"is_a","term_name":"regulation of mitotic DNA replication initiation","termid":"GO:1903466"},{"relation_name":"negatively_regulates","term_name":"mitotic DNA replication initiation","termid":"GO:1902975"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01210":null,"SJAG_02162":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"negative regulation of mitotic DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"down regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"down-regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"down-regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"downregulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"downregulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"inhibition of DNA replication initiation involved in mitotic DNA replication","type":"narrow"},{"name":"inhibition of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"narrow"},{"name":"negative regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1903467","terms_by_termid":{"GO:1903467":null}}


id: PBO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.17","termid":"PBO:0002621"}


id: PBO:0047147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 181 member A","termid":"PBO:0047147"}


id: PBO:0074730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 88","termid":"PBO:0074730"}


id: MONDO:0005581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant lymphoma of the bursa of Fabricius, induced by avian leukosis virus occurring in birds.","definition_xrefs":["EFO:0005923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AVL induced bursal lymphoma","termid":"MONDO:0005581","xrefs":{"Monarch":{"xref_id":"0005581"}}}


id: MONDO:0017410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Porencephaly is characterized by a circumscribed intracerebral cavity of variable size that may be bordered by abnormal polymicrogyric gray matter. In extreme cases, this cavity may result in a communication between the pial surface and the ventricle; this is termed schizencephaly.","definition_xrefs":["Orphanet:2940"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete cerebral malformation with epilepsy (obsolete MONDO:0015655)","termid":"MONDO:0015655"},{"relation_name":"is_a","term_name":"encephaloclastic disorder","termid":"MONDO:0017103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porencephaly","secondary_identifiers":["NANDO:1201074","DOID:0060263","MEDGEN:901502","UMLS:C4082173","HP:0002132","GARD:7430","icd11.foundation:137059367","MedDRA:10036172","MESH:D065708"],"termid":"MONDO:0017410","xrefs":{"Monarch":{"xref_id":"0017410"}}}


id: PBO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2539","termid":"PBO:0055120"}


id: GO:0010249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving auxin conjugates, a bound form of auxin.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auxin conjugate metabolic process","synonyms":[{"name":"auxin conjugate metabolism","type":"exact"}],"termid":"GO:0010249"}


id: GO:0061191
data:
  {"annotated_genes":["SJAG_03137","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99519,112239],"is_not":false,"summary":null,"term":"GO:0061191"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the fusion of two vacuole membranes to form a single vacuole.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuole fusion, non-autophagic","termid":"GO:0032889"},{"relation_name":"is_a","term_name":"positive regulation of vacuole organization","termid":"GO:0044090"},{"relation_name":"positively_regulates","term_name":"vacuole fusion, non-autophagic","termid":"GO:0042144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02433":null,"SJAG_03137":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vacuole fusion, non-autophagic","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061191","terms_by_termid":{"GO:0061191":null}}


id: GO:0021715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the inferior olivary nucleus. This process pertains to the initial formation of a structure from unspecified parts. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","ISBN:0838580343","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"medulla oblongata formation","termid":"GO:0021580"},{"relation_name":"part_of","term_name":"inferior olivary nucleus morphogenesis","termid":"GO:0021714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus formation","synonyms":[{"name":"inferior olive biosynthesis","type":"related"},{"name":"inferior olive formation","type":"related"}],"termid":"GO:0021715"}


id: SO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a change in the structure or number of a chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_variation_attribute","synonyms":[{"name":"chromosomal variation attribute","type":"exact"}],"termid":"SO:0001509"}


id: PBO:0004574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter (predicted)","termid":"PBO:0004574"}


id: FYPO:0001940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquinol-cytochrome-c reductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal ubiquinol-cytochrome-c reductase activity","termid":"FYPO:0001939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000661","FYPO:0000652","FYPO:0000002","FYPO:0000138","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0002114"],"is_obsolete":false,"name":"decreased ubiquinol-cytochrome-c reductase activity","synonyms":[{"name":"reduced ubiquinol-cytochrome-c reductase activity","type":"exact"}],"termid":"FYPO:0001940"}


id: SO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is translationally regulated.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"translationally_regulated","termid":"SO:0000131"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally_regulated_gene","synonyms":[{"name":"translationally regulated gene","type":"exact"}],"termid":"SO:0000896"}


id: MONDO:0018987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign, inflammatory breast disease occurring in premenopausal women shortly after a recent pregnancy. The origin is unknown but it is commonly mistaken for malignancy and sometimes associated with breast feeding and the use of oral contraceptives.","definition_xrefs":["MESH:D058890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulomatous mastitis","secondary_identifiers":["UMLS:C0405469","GARD:18863","MEDGEN:98343","Orphanet:64722","SCTID:237444008"],"synonyms":[{"name":"granulomatous lobular mastitis","type":"related"},{"name":"idiopathic granulomatous lobular mastitis","type":"related"},{"name":"idiopathic granulomatous mastitis","type":"exact"}],"termid":"MONDO:0018987","xrefs":{"Monarch":{"xref_id":"0018987"}}}


id: MONDO:0022171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition characterized by the secretion of colored sweat, caused by the deposition of lipofuscin in the sweat glands. Usually chromhidrosis affects the apocrine glands, mainly on the face and underarms.","definition_xrefs":["Wikipedia:Chromhidrosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apocrine sweat gland disorder","termid":"MONDO:0024467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chromhidrosis","secondary_identifiers":["ICD10CM:L75.1","ICD9:705.89","MEDGEN:82667","UMLS:C0263473","icd11.foundation:864449620","SCTID:26147006"],"synonyms":[{"name":"chromhidrosis","type":"exact"},{"name":"secretion of colored sweat","type":"related"},{"name":"secretion of coloured sweat","type":"related"}],"termid":"MONDO:0022171","xrefs":{"Monarch":{"xref_id":"0022171"}}}


id: PBO:0073191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein T pseudogene 2","termid":"PBO:0073191"}


id: GO:0052751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-mannose + H2O = GMP + mannose-1-phosphate.","definition_xrefs":["PMID:16766526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"GDP-mannose hydrolase activity","synonyms":[{"name":"GDP-mannose pyrophosphatase activity","type":"related"}],"termid":"GO:0052751"}


id: GO:0170014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex composed of ANK1, RHCE, RHAG, SLC4A1, EPB42, GYPA, GYPB and AQP1, that functions in the stability and shape of the erythrocyte membrane in human.","definition_xrefs":["PMID:35835865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ankyrin-1 complex","synonyms":[{"name":"ankyrin complex","type":"exact"},{"name":"erythrocyte ankyrin-1 complex","type":"exact"}],"termid":"GO:0170014"}


id: PBO:0086044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in outer spore wall organization; has similarity to the tafazzins superfamily of acyltransferases","termid":"PBO:0086044"}


id: PBO:0045435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L2 pseudogene 3","termid":"PBO:0045435"}


id: MONDO:0013605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any brittle cornea syndrome in which the cause of the disease is a mutation in the PRDM5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brittle cornea syndrome","termid":"MONDO:0009242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"brittle cornea syndrome 2","secondary_identifiers":["DOID:0080729","GARD:15764","OMIM:614170","MEDGEN:481641","UMLS:C3280011"],"synonyms":[{"name":"BCS2","type":"related"},{"name":"PRDM5 brittle cornea syndrome","type":"exact"},{"name":"brittle cornea syndrome 2","type":"exact"},{"name":"brittle cornea syndrome caused by mutation in PRDM5","type":"exact"},{"name":"brittle cornea syndrome type 2","type":"exact"}],"termid":"MONDO:0013605","xrefs":{"Monarch":{"xref_id":"0013605"}}}


id: MONDO:0032677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorder with complex brainstem malformation","termid":"MONDO:0100472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 9 with complex brainstem malformation","secondary_identifiers":["UMLS:C5193029","DOID:0112228","OMIM:618325","MEDGEN:1681109","Orphanet:572013","GARD:18007"],"synonyms":[{"name":"LIS9","type":"related"},{"name":"LISSENCEPHALY 9 WITH COMPLEX BRAINSTEM MALFORMATION","type":"related"}],"termid":"MONDO:0032677","xrefs":{"Monarch":{"xref_id":"0032677"}}}


id: GO:0044620
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000036"}]},"cv_name":"molecular_function","definition":"Binding to the attachment site of the phosphopantetheine prosthetic group of an acyl carrier protein (ACP).","definition_xrefs":["GOC:vw","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prosthetic group binding","termid":"GO:0051192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ACP phosphopantetheine attachment site binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0044620","terms_by_termid":{"GO:0000036":null}}


id: PATO:0002108
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's resembling small nipple like projection.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exserted","termid":"PATO:0000623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary","termid":"PATO:0002108"}


id: GO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lactose + H2O = D-glucose + D-galactose.","definition_xrefs":["PMID:12023280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lactase activity","secondary_identifiers":["Reactome:R-HSA-5658001","Reactome:R-HSA-189062","MetaCyc:BETAGALACTOSID-RXN","EC:3.2.1.108","RHEA:10076"],"synonyms":[{"name":"lactose galactohydrolase activity","type":"exact"}],"termid":"GO:0000016"}


id: PBO:0050878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 1","termid":"PBO:0050878"}


id: GO:0016631
data:
  {"annotated_genes":["SJAG_02007","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004318"},{"annotations":[96890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-[acyl-carrier protein] + NAD(P)+ = trans-2,3-dehydroacyl-[acyl-carrier protein] + NAD(P)H + H+.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02007":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase [NAD(P)H] activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Enoyl-acyl_carrier_protein_reductase"],"synonyms":[{"name":"enoyl-ACP reductase activity","type":"exact"},{"name":"enoyl-[acyl-carrier protein] reductase activity","type":"exact"},{"name":"enoyl-[acyl-carrier-protein] reductase activity","type":"broad"},{"name":"enoyl-[acyl-carrier-protein] reductase activity (NAD(P)H)","type":"exact"},{"name":"enoyl-acyl carrier protein reductase","type":"exact"}],"termid":"GO:0016631","terms_by_termid":{"GO:0004318":null,"GO:0141148":null}}


id: GO:0071837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an HMG box domain, a protein domain that consists of three helices in an irregular array. HMG-box domains are found in one or more copies in HMG-box proteins, which form a large, diverse family involved in the regulation of DNA-dependent processes such as transcription, replication, and strand repair, all of which require the bending and unwinding of chromatin.","definition_xrefs":["GOC:yaf","InterPro:IPR009071","PMID:18445004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"HMG box domain binding","termid":"GO:0071837"}


id: GO:1900402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of carbohydrate metabolic process.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:16408318"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900402)","synonyms":[{"name":"regulation of carbohydrate metabolism by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900402"}


id: GO:0034546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dichloroaniline + 2 H+ + 2 e- = 4-chloroaniline + HCl.","definition_xrefs":["UM-BBD_reactionID:r0819"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dichloroaniline reductive dehalogenase activity (obsolete GO:0034546)","termid":"GO:0034546"}


id: FYPO:0001370
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04349:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04349","name":"vps28delta","uniquename":"SJAG_04349:allele-1"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_04912:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04912","name":"vps25delta","uniquename":"SJAG_04912:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[121405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[121269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"},{"annotations":[121407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[121403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003946"}],"single_locus_phenotype":[{"annotations":[121265,121266],"is_not":false,"summary":null,"term":"FYPO:0001370"},{"annotations":[121255,121256,121254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001440"},{"annotations":[121268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004718"},{"annotations":[121425,121426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[121244,121264,121243,121261,121259,121262,121263,121234,121233,121241,121240,121257,121260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[121639,121641,121638,121399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[121358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001375"},{"annotations":[121404,121396,121408,121397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[121237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"},{"annotations":[121640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"},{"annotations":[121236],"is_not":false,"rel_names":["output_of","is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is abnormal. 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L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_05207","SJAG_03892","SJAG_01050","SJAG_03596","SJAG_02392","SJAG_01143"],"name":"abnormal protein localization","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_05207","SJAG_03892","SJAG_04489","SJAG_04349","SJAG_03250","SJAG_01745","SJAG_01050","SJAG_02392","SJAG_04280","SJAG_04912","SJAG_03783","SJAG_01143"],"single_locus_genotype_uniquenames":["vps25delta","cmp7delta","lem2delta","sst4delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","did4delta","vps28delta","nur1delta","vps24delta","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","mid1delta"],"synonyms":[{"name":"abnormal cellular protein localisation","type":"exact"},{"name":"abnormal cellular protein localization","type":"exact"},{"name":"abnormal protein localisation","type":"exact"},{"name":"protein/peptide distribution: abnormal","type":"related"}],"termid":"FYPO:0001370","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000731":null,"FYPO:0001132":null,"FYPO:0001370":null,"FYPO:0001375":null,"FYPO:0001440":null,"FYPO:0002870":null,"FYPO:0003657":null,"FYPO:0003946":null,"FYPO:0004718":null,"FYPO:0005503":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"GO:0000815":null}}


id: FYPO:0006722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Cdr2 medial cortical node complex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:28924043","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to Cdr2 medial cortical node complex","synonyms":[{"name":"normal protein localisation to Cdr2 medial cortical node complex","type":"exact"},{"name":"normal protein localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"normal protein localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"}],"termid":"FYPO:0006722"}


id: GO:0001699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid by parietal cells in response to acetylcholine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric acid secretion","termid":"GO:0001696"},{"relation_name":"part_of","term_name":"cellular response to acetylcholine","termid":"GO:1905145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"acetylcholine-induced gastric acid secretion","termid":"GO:0001699"}


id: GO:0061203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the paramyosin-based thick filaments of myofibrils in striated muscle.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paramyosin filament assembly or disassembly","termid":"GO:0061204"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"striated muscle paramyosin thick filament assembly","termid":"GO:0061203"}


id: GO:0030256
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of three secretory proteins that carry out secretion in the type I secretion system: an inner membrane transport ATPase (termed ABC protein for ATP-binding cassette), which provides the energy for protein secretion; an outer membrane protein, which is exported via the sec pathway; and a membrane fusion protein, which is anchored in the inner membrane and spans the periplasmic space.","definition_xrefs":["PMID:9618447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"type I protein secretion system complex","synonyms":[{"name":"ABC translocator complex","type":"broad"}],"termid":"GO:0030256"}


id: PBO:0004283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor (predicted)","termid":"PBO:0004283"}


id: MONDO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal deposit","secondary_identifiers":["ICD10CM:H18.0","icd11.foundation:1760427912","UMLS:C0162281","MEDGEN:511537","DOID:11547","ICD9:371.10","SCTID:74460005"],"synonyms":[{"name":"deposits - cornea","type":"exact"}],"termid":"MONDO:0001308","xrefs":{"Monarch":{"xref_id":"0001308"}}}


id: PBO:0052005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"joining chain of multimeric IgA and IgM pseudogene 1","termid":"PBO:0052005"}


id: PBO:0061232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP9 nucleolar protein","termid":"PBO:0061232"}


id: MONDO:0003054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A grade I, slowly growing meningioma. Only a minority of tumors recur following complete resection.","definition_xrefs":["NCIT:C4055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"benign neoplasm of meninges","termid":"MONDO:0021527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign meningioma","secondary_identifiers":["DOID:4587","MEDGEN:129095","SCTID:724171006","UMLS:C0281784"],"synonyms":[{"name":"benign meningioma (WHO grade I)","type":"exact"},{"name":"meningioma (disease), benign","type":"exact"},{"name":"meningioma, benign","type":"exact"}],"termid":"MONDO:0003054","xrefs":{"Monarch":{"xref_id":"0003054"}}}


id: PBO:0012296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 implicated in transcription (predicted)","termid":"PBO:0012296"}


id: PBO:0058756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6880","termid":"PBO:0058756"}


id: PBO:0088102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ureidoglycolate lyase; converts ureidoglycolate to glyoxylate and urea in the third step of allantoin degradation; expression is sensitive to nitrogen catabolite repression; this enzyme is sometimes referred to 'ureidoglycolate hydrolase' but should not be confused with the Arabidopsis thaliana ureidoglycolate hydrolase enzyme which converts ureidoglycolate to glyoxylate, ammonia and carbon dioxide","termid":"PBO:0088102"}


id: PBO:0003066
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.22","termid":"PBO:0003066"}


id: GO:0043204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the cell soma (neuronal cell body) that excludes the nucleus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perikaryon","synonyms":[{"name":"cell soma cytoplasm","type":"related"}],"termid":"GO:0043204"}


id: PBO:0074267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC5-SMC6 complex localization factor 2","termid":"PBO:0074267"}


id: MONDO:0016216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult hepatocellular carcinoma is the most common primary liver cancer of adulthood. Derived from well-differentiated hepatocytes, it often develops from chronic liver cirrhosis which is most often due to hepatitis B and C virus or alcohol abuse. Symptoms are hepatic mass, abdominal pain and, in advanced stages, jaundice, cachexia and liver failure.","definition_xrefs":["Orphanet:210159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"adult hepatocellular carcinoma","secondary_identifiers":["MEDGEN:124633","DOID:0070328","NCIT:C7956","UMLS:C0279607","GARD:6608"],"synonyms":[{"name":"adult HCC","type":"exact"},{"name":"adult hepatocellular carcinoma","type":"exact"},{"name":"adult hepatoma","type":"exact"},{"name":"adult primary carcinoma of liver cell","type":"exact"},{"name":"adult primary carcinoma of the liver cell","type":"exact"},{"name":"adult primary hepatocellular carcinoma","type":"exact"},{"name":"adult primary hepatoma","type":"exact"},{"name":"adult primary liver cell carcinoma","type":"exact"},{"name":"hepatocellular cancer","type":"broad"},{"name":"hepatocellular carcinoma of adults","type":"exact"}],"termid":"MONDO:0016216","xrefs":{"Monarch":{"xref_id":"0016216"}}}


id: SO:0000806
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When two regions of DNA are joined together that are not normally together.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion","termid":"SO:0000806"}


id: MONDO:0018245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"2p21 microdeletion syndrome without cystinuria is a rare partial autosomal monosomy characterized by weak fetal movements, severe infantile hypotonia and feeding difficulties that spontaneously improve with time, urogenital abnormalities (hypospadias or hypoplastic labia majora), global development delay, mild intellectual disability and facial dysmorphism (dolichocephaly, frontal bossing, bilateral ptosis, midface retrusion, open mouth with tented upper lip vermilion). Affected individuals have borderline elevated serum lactate but no cystinuria.","definition_xrefs":["Orphanet:369881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2p21 microdeletion syndrome","termid":"MONDO:0015583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2p21 microdeletion syndrome without cystinuria","secondary_identifiers":["MEDGEN:1666351","GARD:21581","UMLS:C4749458"],"synonyms":[{"name":"Del(2)(p21) without cystinuria","type":"exact"}],"termid":"MONDO:0018245","xrefs":{"Monarch":{"xref_id":"0018245"}}}


id: MONDO:1011098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alkaptonuria that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaptonuria, non-human animal","termid":"MONDO:1010270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaptonuria, domestic cat","secondary_identifiers":["OMIA:001243-9685"],"termid":"MONDO:1011098","xrefs":{"Monarch":{"xref_id":"1011098"}}}


id: GO:0034038
data:
  {"annotated_genes":["SJAG_04130"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72597],"is_not":false,"summary":null,"term":"GO:0034038"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [eIF5A-precursor]-lysine + spermidine = [eIF5A-precursor]-deoxyhypusine + propane-1,3-diamine. Four sub-reactions have been identified,in which the intermediates remain tightly associated with the enzyme: spermidine + NAD+ = dehydrospermidine + NADH; dehydrospermidine + [enzyme]-lysine = N-(4-aminobutylidene)-[enzyme]-lysine + propane-1,3-diamine; N-(4-aminobutylidene)-[enzyme]-lysine + [eIF5A-precursor]-lysine = N-(4-aminobutylidene)-[eIF5A-precursor]-lysine + [enzyme]-lysine; N-(4-aminobutylidene)-[eIF5A-precursor]-lysine + NADH + H+ = [eIF5A-precursor]-deoxyhypusine + NAD+.","definition_xrefs":["GOC:pde","RHEA:33299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04130":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"deoxyhypusine synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-204647","MetaCyc:2.5.1.46-RXN","Reactome:R-HSA-204617","EC:2.5.1.46"],"synonyms":[{"name":"(4-aminobutyl)lysine synthase","type":"broad"},{"name":"eIF-5A-deoxyhypusine synthase activity","type":"related"},{"name":"spermidine dehydrogenase","type":"broad"}],"termid":"GO:0034038","terms_by_termid":{"GO:0034038":null}}


id: PBO:0052700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 1","termid":"PBO:0052700"}


id: PBO:0044758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 42","termid":"PBO:0044758"}


id: PBO:0069876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1163, pseudogene","termid":"PBO:0069876"}


id: PBO:0079570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B pseudogene 2","termid":"PBO:0079570"}


id: GO:1990114
data:
  {"annotated_genes":["SJAG_04531","SJAG_04093","SJAG_04012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80335,104113,120081],"is_not":false,"summary":null,"term":"GO:1990114"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic RNA polymerase II core complex.","definition_xrefs":["GOC:rb","PMID:23459708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04012":null,"SJAG_04093":null,"SJAG_04531":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"RNA polymerase II core complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase II, core complex assembly","type":"exact"},{"name":"RNA Polymerase II assembly","type":"broad"}],"termid":"GO:1990114","terms_by_termid":{"GO:1990114":null}}


id: PBO:0066572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh blood group CcEe antigens","termid":"PBO:0066572"}


id: PBO:0060396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2","termid":"PBO:0060396"}


