# terms

id: GO:0005739
data:
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id: PR:Q9P7P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ker1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7P1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.03","synonyms":[{"name":"DNA-directed RNA polymerase I 17 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ker1","type":"exact"},{"name":"nucleolar protein ker1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7P1"}


id: GO:0030825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cGMP metabolic process (obsolete GO:0030825)","synonyms":[{"name":"activation of cGMP metabolic process","type":"narrow"},{"name":"positive regulation of cGMP metabolism","type":"exact"},{"name":"stimulation of cGMP metabolic process","type":"narrow"},{"name":"up regulation of cGMP metabolic process","type":"exact"},{"name":"up-regulation of cGMP metabolic process","type":"exact"},{"name":"upregulation of cGMP metabolic process","type":"exact"}],"termid":"GO:0030825"}


id: PBO:0039862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 26","termid":"PBO:0039862"}


id: PBO:0089441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalamin (vitamin B12) biosynthesis CobW-like protein","termid":"PBO:0089441"}


id: PBO:0039435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and armadillo repeat containing","termid":"PBO:0039435"}


id: PBO:0045684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 4","termid":"PBO:0045684"}


id: PBO:0069020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 264, pseudogene","termid":"PBO:0069020"}


id: PR:P36625
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec7 gene.","definition_xrefs":["UniProtKB:P36625","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1753.03c","synonyms":[{"name":"Spom972h-rec7","type":"exact"}],"termid":"PR:P36625"}


id: GO:0086009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization","termid":"GO:0086009"}


id: GO:0106194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transocation of inorganic cations and their chelates linked to a decarboxylation reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic cations and their chelates linked to a decarboxylation reaction (obsolete GO:0106194)","termid":"GO:0106194"}


id: FYPO:0006564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to ethanol when the cell population is in stationary phase. Cells stop growing (and may die) at a concentration of ethanol that allows wild type cells to grow.","definition_xrefs":["PMID:9372444","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical in stationary phase","termid":"FYPO:0008000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to ethanol in stationary phase","synonyms":[{"name":"decreased cell population growth during cellular response to ethanol in stationary phase","type":"exact"},{"name":"decreased growth during cellular response to ethanol in stationary phase","type":"exact"},{"name":"hypersensitive to ethanol in stationary phase","type":"exact"},{"name":"sensitive to ethanol during stationary phase","type":"exact"},{"name":"sensitive to ethyl alcohol in stationary phase","type":"exact"}],"termid":"FYPO:0006564"}


id: MOD:00291
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-aspartic acid residue and a four-iron four-sulfur cluster to tris-L-cysteinyl L-aspartato tetrairon tetrasulfide.","definition_xrefs":["PubMed:9283079","RESID:AA0286","PubMed:7819255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-aspartato tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"tetra-mu3-sulfidotris(S-cysteinyliron)(O4-aspartatoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-aspartato tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00291"}


id: GO:1902176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","PMID:11672522","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902175"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902176"}


id: PBO:0049629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 32","termid":"PBO:0049629"}


id: GO:2000290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myotome development.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"myotome development","termid":"GO:0061055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myotome development","termid":"GO:2000290"}


id: SO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A C-terminal tetrapeptide motif that mediates retention of a protein in (or retrieval to) the endoplasmic reticulum. In mammals the sequence is KDEL, and in fungi HDEL or DDEL.","definition_xrefs":["PMID:2077689","doi:10.1093/jxb/50.331.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"ER_retention_signal","synonyms":[{"name":"ER retention signal","type":"exact"},{"name":"endoplasmic reticulum retention signal","type":"exact"}],"termid":"SO:0001806"}


id: PBO:0053727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 941","termid":"PBO:0053727"}


id: PBO:0088225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Aly1","termid":"PBO:0088225"}


id: PBO:0061099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroligin 3","termid":"PBO:0061099"}


id: GO:1905372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ceramide phosphoethanolamine.","definition_xrefs":["GO_REF:0000068","GOC:hjd","PMID:25667419","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"},{"relation_name":"is_a","term_name":"ceramide phosphoethanolamine metabolic process","termid":"GO:1905371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ceramide phosphoethanolamine catabolic process","synonyms":[{"name":"ceramide phosphoethanolamine breakdown","type":"exact"},{"name":"ceramide phosphoethanolamine catabolism","type":"exact"},{"name":"ceramide phosphoethanolamine degradation","type":"exact"}],"termid":"GO:1905372"}


id: PBO:0068244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 1","termid":"PBO:0068244"}


id: GO:0050465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(hydroxyamino)quinoline N-oxide + 2 NAD(P)+ + H2O = 4-nitroquinoline N-oxide + 2 NAD(P)H + 2 H+.","definition_xrefs":["EC:1.7.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitroquinoline-N-oxide reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.7.1.9-RXN"],"synonyms":[{"name":"4-(hydroxyamino)quinoline N-oxide:NADP+ oxidoreductase activity","type":"related"},{"name":"4-nitroquinoline 1-oxide reductase activity","type":"related"},{"name":"4NQO reductase activity","type":"related"},{"name":"NAD(P)H2:4-nitroquinoline-N-oxide oxidoreductase activity","type":"related"},{"name":"NAD(P)H:4-nitroquinoline-N-oxide oxidoreductase activity","type":"related"}],"termid":"GO:0050465"}


id: MONDO:0021494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the parotid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parotid gland neoplasm","termid":"MONDO:0021243"},{"relation_name":"is_a","term_name":"benign neoplasm of major salivary gland","termid":"MONDO:0021492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of parotid gland","secondary_identifiers":["NCIT:C4770","ICD10CM:D11.0","UMLS:C0496857","icd11.foundation:1688299444","SCTID:92279000","MEDGEN:99220"],"synonyms":[{"name":"benign neoplasm of parotid","type":"exact"},{"name":"benign neoplasm of the parotid","type":"exact"},{"name":"benign neoplasm of the parotid gland","type":"exact"},{"name":"benign parotid gland neoplasm","type":"exact"},{"name":"benign parotid gland tumor","type":"exact"},{"name":"benign parotid gland tumour","type":"exact"},{"name":"benign parotid neoplasm","type":"exact"},{"name":"benign parotid tumor","type":"exact"},{"name":"benign parotid tumour","type":"exact"},{"name":"benign tumor of parotid","type":"exact"},{"name":"benign tumor of parotid gland","type":"exact"},{"name":"benign tumor of the parotid","type":"exact"},{"name":"benign tumor of the parotid gland","type":"exact"},{"name":"benign tumour of parotid","type":"exact"},{"name":"benign tumour of parotid gland","type":"exact"},{"name":"benign tumour of the parotid","type":"exact"},{"name":"benign tumour of the parotid gland","type":"exact"},{"name":"parotid gland benign neoplasm","type":"exact"}],"termid":"MONDO:0021494","xrefs":{"Monarch":{"xref_id":"0021494"}}}


id: PBO:0063255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDHB1 antisense RNA 1","termid":"PBO:0063255"}


id: PBO:0044482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 26 subfamily B member 1","termid":"PBO:0044482"}


id: GO:0140754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in intracellular membranes are reorganized by viral proteins that perturb membrane integrity and can cause an extensive rearrangement of cellular membranes, forming membranous webs, which are thought to be the site of replication or certain viruses, for example the HPV virus.","definition_xrefs":["PMID:19376974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reorganization of cellular membranes to establish viral sites of replication","termid":"GO:0140754"}


id: PBO:0039825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor interacting protein 2","termid":"PBO:0039825"}


id: MONDO:0017009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome X","termid":"MONDO:0017008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome X","secondary_identifiers":["GARD:12421","UMLS:C5679686","MEDGEN:1826027","Orphanet:263775"],"synonyms":[{"name":"partial duplication of chromosome Xp","type":"exact"},{"name":"partial duplication of the short arm of chromosome type X","type":"exact"},{"name":"partial trisomy of chromosome Xp","type":"exact"},{"name":"partial trisomy of the short arm of chromosome X","type":"exact"}],"termid":"MONDO:0017009","xrefs":{"Monarch":{"xref_id":"0017009"}}}


id: PBO:0070326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 15","termid":"PBO:0070326"}


id: PBO:0058220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4510","termid":"PBO:0058220"}


id: PR:O14249
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ABHD4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin-specific deacylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.03c","secondary_identifiers":["UniProtKB:O14249"],"synonyms":[{"name":"Spom972h-ABHD4","type":"exact"}],"termid":"PR:O14249"}


id: PATO:0002533
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A multipartite quality inhering in a bearer by virtue of the bearer being divided into two parts.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multipartite","termid":"PATO:0002510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipartite","termid":"PATO:0002533"}


id: PBO:0017968
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YER025W","termid":"PBO:0017968"}


id: GO:0042740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an antibiotic that has originated externally to the cell or organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic catabolic process","termid":"GO:0017001"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"part_of","term_name":"response to antibiotic","termid":"GO:0046677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exogenous antibiotic catabolic process","synonyms":[{"name":"exogenous antibiotic breakdown","type":"exact"},{"name":"exogenous antibiotic catabolism","type":"exact"},{"name":"exogenous antibiotic degradation","type":"exact"}],"termid":"GO:0042740"}


id: MONDO:0023961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visceral neuropathy, familial","secondary_identifiers":["MEDGEN:540202","OMIMPS:243180","UMLS:C0266834"],"termid":"MONDO:0023961","xrefs":{"Monarch":{"xref_id":"0023961"}}}


id: PBO:0060332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IIIB","termid":"PBO:0060332"}


id: GO:0015147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-arabinose from one side of a membrane to the other. Arabinose occurs free, for example in the heartwood of many conifers and in the combined states, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides, etc.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose transmembrane transporter activity","termid":"GO:0042900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-arabinose transmembrane transporter activity","synonyms":[{"name":"L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity","type":"narrow"}],"termid":"GO:0015147"}


id: PBO:0040812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD family like cargo adaptor 1","termid":"PBO:0040812"}


id: GO:0070957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a gram-negative bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of gram-negative bacterium","termid":"GO:0070951"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of bacterium","termid":"GO:0070956"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of gram-negative bacterium","termid":"GO:0070945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of gram-negative bacterium","synonyms":[{"name":"down regulation of neutrophil mediated killing of gram-negative bacterium","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of gram-negative bacterium","type":"exact"},{"name":"downregulation of neutrophil mediated killing of gram-negative bacterium","type":"exact"},{"name":"inhibition of neutrophil mediated killing of gram-negative bacterium","type":"narrow"}],"termid":"GO:0070957"}


id: RO:0002608
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of 'causal agent in'","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_causal_agent","termid":"RO:0002608"}


id: PBO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor IF2 (predicted)","termid":"PBO:0000785"}


id: GO:0034171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"regulation of TLR11 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034171"}


id: GO:0032341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldosterone, a corticosteroid hormone that is produced by the zona glomerulosa of the adrenal cortex and regulates salt (sodium and potassium) and water balance.","definition_xrefs":["PMID:16527843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"C21-steroid hormone metabolic process","termid":"GO:0008207"},{"relation_name":"is_a","term_name":"mineralocorticoid metabolic process","termid":"GO:0008212"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"aldosterone metabolic process","synonyms":[{"name":"aldosterone metabolism","type":"exact"}],"termid":"GO:0032341"}


id: PBO:0064412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 6E","termid":"PBO:0064412"}


id: GO:0005353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fructose from one side of a membrane to the other. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"fructose transmembrane transporter activity","secondary_identifiers":["GO:0015585","Reactome:R-HSA-189222","GO:0019192"],"synonyms":[{"name":"fructose permease activity","type":"exact"},{"name":"fructose porter activity","type":"exact"}],"termid":"GO:0005353"}


id: PR:Q6LA53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein AAR2 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A1 cistron-splicing factor aar2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.04","secondary_identifiers":["UniProtKB:Q6LA53"],"synonyms":[{"name":"Spom972h-AAR2","type":"exact"}],"termid":"PR:Q6LA53"}


id: PBO:0064257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A5","termid":"PBO:0064257"}


id: GO:0044842
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lumen of a gut granule, a lysosome-related organelle contained within the intestinal cells of the nematode C. elegans.","definition_xrefs":["PMID:24204312","PMID:22916203","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"gut granule","termid":"GO:0044840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"gut granule lumen","termid":"GO:0044842"}


id: GO:0140073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A structural molecule ativity that mediates an organism's attachment to an environmental substrate via stable, non-selective binding by a protein to an external surface. Examples includes proteins used by insects to anchor pupae to surfaces.","definition_xrefs":["PMID:39370426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"bioadhesive activity","termid":"GO:0140073"}


id: FYPO:0003365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pyridoxine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal pyridoxine import","synonyms":[{"name":"abnormal pyridoxine import across plasma membrane","type":"exact"},{"name":"abnormal pyridoxine import during mitotic cell cycle","type":"related"},{"name":"abnormal pyridoxine import during vegetative growth","type":"exact"},{"name":"abnormal pyridoxine import into cell","type":"exact"},{"name":"abnormal pyridoxine uptake","type":"exact"}],"termid":"FYPO:0003365"}


id: GO:0019532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxalate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"oxalate transport","synonyms":[{"name":"ethanedioate transport","type":"exact"},{"name":"ethanedioic acid transport","type":"exact"},{"name":"oxalic acid transport","type":"exact"}],"termid":"GO:0019532"}


id: FYECO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium sulfate (Na2SO4) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na2SO4","synonyms":[{"name":"sodium sulfate added","type":"exact"}],"termid":"FYECO:0000205"}


id: PBO:0078739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRMT1 pseudogene 1","termid":"PBO:0078739"}


id: PBO:0076900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 54","termid":"PBO:0076900"}


id: MONDO:0007684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete granulomatous disease, chronic, autosomal dominant type (obsolete MONDO:0007684)","termid":"MONDO:0007684","xrefs":{"Monarch":{"xref_id":"0007684"}}}


id: GO:1904531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin filament binding.","definition_xrefs":["GOC:TermGenie","PMID:24520051","GOC:als","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of actin filament binding","synonyms":[{"name":"activation of F-actin binding","type":"narrow"},{"name":"activation of actin cross-linking activity","type":"related"},{"name":"activation of actin filament binding","type":"narrow"},{"name":"positive regulation of F-actin binding","type":"exact"},{"name":"positive regulation of actin cross-linking activity","type":"related"},{"name":"up regulation of F-actin binding","type":"exact"},{"name":"up regulation of actin cross-linking activity","type":"related"},{"name":"up regulation of actin filament binding","type":"exact"},{"name":"up-regulation of F-actin binding","type":"exact"},{"name":"up-regulation of actin cross-linking activity","type":"related"},{"name":"up-regulation of actin filament binding","type":"exact"},{"name":"upregulation of F-actin binding","type":"exact"},{"name":"upregulation of actin cross-linking activity","type":"related"},{"name":"upregulation of actin filament binding","type":"exact"}],"termid":"GO:1904531"}


id: PBO:0027715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_5'-end_processing","termid":"PBO:0027715"}


id: PBO:0078025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 15","termid":"PBO:0078025"}


id: MOD:01163
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an amino acid residue and 5'-phosphoguanosine through either a phosphodiester or a phosphoramide bond.","definition_xrefs":["Unimod:413","DeltaMass:304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylated residue","synonyms":[{"name":"5'phos Guanosyl","type":"exact"},{"name":"Phosphoguanosine","type":"related"},{"name":"phospho-guanosine","type":"related"}],"termid":"MOD:01163"}


id: PBO:0031414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_G2/M_transition_delay","termid":"PBO:0031414"}


id: MONDO:0010999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fallot complex - intellectual deficit - growth delay is a rare disorder characterized by tetralogy of Fallot, minor facial anomalies, and severe intellectual deficiency and growth delay.","definition_xrefs":["Orphanet:3304"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallot complex-intellectual disability-growth delay syndrome","secondary_identifiers":["MESH:C536608","MEDGEN:322025","SCTID:723336008","GARD:893","UMLS:C1832735","OMIM:601127"],"synonyms":[{"name":"Bindewald Ulmer Muller syndrome","type":"related"},{"name":"Bindewald-Ulmer-Müller syndrome","type":"exact"},{"name":"FALLOT complex with severe mental and growth retardation","type":"related"}],"termid":"MONDO:0010999","xrefs":{"Monarch":{"xref_id":"0010999"}}}


id: PBO:0005402
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.37","termid":"PBO:0005402"}


id: GO:0043377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of CD8-positive, alpha-beta T cell differentiation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043376"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell differentiation","termid":"GO:0046639"},{"relation_name":"is_a","term_name":"negative regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001186"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta T cell differentiation","synonyms":[{"name":"down regulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"down-regulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"downregulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"inhibition of CD8-positive, alpha-beta T cell differentiation","type":"narrow"},{"name":"negative regulation of CD8-positive T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive T-cell differentiation","type":"exact"},{"name":"negative regulation of CD8-positive T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha-beta T cell development","type":"related"}],"termid":"GO:0043377"}


id: PBO:0026691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tamoxifen","termid":"PBO:0026691"}


id: MONDO:0007274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carpal displacement","secondary_identifiers":["UMLS:C1861847","MEDGEN:348468","OMIM:115400"],"synonyms":[{"name":"carpal bossing","type":"related"},{"name":"carpal displacement","type":"exact"}],"termid":"MONDO:0007274","xrefs":{"Monarch":{"xref_id":"0007274"}}}


id: GO:1901098
data:
  {"annotated_genes":["SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99518],"is_not":false,"summary":null,"term":"GO:1901098"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of autophagosome maturation.","definition_xrefs":["GOC:TermGenie","GOC:autophagy","PMID:10436019","PMID:21383079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"regulation of autophagosome maturation","termid":"GO:1901096"},{"relation_name":"positively_regulates","term_name":"autophagosome maturation","termid":"GO:0097352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02433":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of autophagosome maturation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902454"],"synonyms":[{"name":"activation of amphisome-lysosome fusion","type":"narrow"},{"name":"activation of autolysosome formation","type":"narrow"},{"name":"activation of autophagic vacuole fusion","type":"narrow"},{"name":"activation of autophagic vacuole maturation","type":"narrow"},{"name":"activation of autophagosome maturation","type":"exact"},{"name":"activation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"positive regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"positive regulation of autolysosome formation","type":"narrow"},{"name":"positive regulation of autophagic vacuole fusion","type":"exact"},{"name":"positive regulation of autophagosome fusion","type":"exact"},{"name":"positive regulation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"up regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"up regulation of autolysosome formation","type":"narrow"},{"name":"up regulation of autophagic vacuole fusion","type":"exact"},{"name":"up regulation of autophagic vacuole maturation","type":"exact"},{"name":"up regulation of autophagosome maturation","type":"exact"},{"name":"up regulation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"up-regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"up-regulation of autolysosome formation","type":"narrow"},{"name":"up-regulation of autophagic vacuole fusion","type":"exact"},{"name":"up-regulation of autophagic vacuole maturation","type":"exact"},{"name":"up-regulation of autophagosome maturation","type":"exact"},{"name":"up-regulation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"upregulation of amphisome-lysosome fusion","type":"narrow"},{"name":"upregulation of autolysosome formation","type":"narrow"},{"name":"upregulation of autophagic vacuole fusion","type":"exact"},{"name":"upregulation of autophagic vacuole maturation","type":"exact"},{"name":"upregulation of autophagosome maturation","type":"exact"},{"name":"upregulation of fusion of autophagosome with lysosome","type":"narrow"}],"termid":"GO:1901098","terms_by_termid":{"GO:1901098":null}}


id: MONDO:0008257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet responsiveness to adrenaline, depressed","secondary_identifiers":["MEDGEN:358151","OMIM:173580","UMLS:C1868200"],"synonyms":[{"name":"platelet responsiveness to adrenaline, depressed","type":"exact"}],"termid":"MONDO:0008257","xrefs":{"Monarch":{"xref_id":"0008257"}}}


id: PBO:0038907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E2","termid":"PBO:0038907"}


id: MONDO:0021329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the soft palate. The majority are squamous cell carcinomas.","definition_xrefs":["NCIT:C8395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft palate cancer","termid":"MONDO:0004611"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"},{"relation_name":"is_a","term_name":"oropharyngeal carcinoma","termid":"MONDO:0044926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma of soft palate","secondary_identifiers":["MEDGEN:87505","UMLS:C0345555","SCTID:254435009"],"synonyms":[{"name":"carcinoma of soft palate","type":"exact"},{"name":"carcinoma of the soft palate","type":"exact"},{"name":"soft palate cancer","type":"broad"},{"name":"soft palate carcinoma","type":"exact"}],"termid":"MONDO:0021329","xrefs":{"Monarch":{"xref_id":"0021329"}}}


id: GO:0033907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing beta-D-fucose residues in beta-D-fucosides.","definition_xrefs":["EC:3.2.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"beta-D-fucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.38-RXN"],"synonyms":[{"name":"beta-D-fucoside fucohydrolase activity","type":"related"},{"name":"beta-fucosidase activity","type":"related"}],"termid":"GO:0033907"}


id: PR:O74481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.08c","synonyms":[{"name":"Spom972h-pdi5","type":"exact"}],"termid":"PR:O74481"}


id: PR:Q9Y7L4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exonuclease V that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease V, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.02","secondary_identifiers":["UniProtKB:Q9Y7L4"],"synonyms":[{"name":"Exo V (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EXO5","type":"exact"}],"termid":"PR:Q9Y7L4"}


id: SO:0000642
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a signal recognition particle RNA (SRP RNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA_encoding","synonyms":[{"name":"SRP RNA encoding","type":"exact"}],"termid":"SO:0000642"}


id: MONDO:0002890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastrointestinal adenoma (obsolete MONDO:0002890)","termid":"MONDO:0002890","xrefs":{"Monarch":{"xref_id":"0002890"}}}


id: FYPO:0006970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of bisphosphoglyceric acid measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular bisphosphoglyceric acid level","synonyms":[{"name":"decreased cellular bisphosphoglyceric acid level during mitotic cell cycle","type":"related"},{"name":"decreased cellular bisphosphoglyceric acid level during vegetative growth","type":"exact"},{"name":"decreased cellular diphosphoglycerate level","type":"related"},{"name":"decreased level of bisphosphoglyceric acid in cell","type":"exact"},{"name":"reduced cellular bisphosphoglyceric acid level","type":"exact"}],"termid":"FYPO:0006970"}


id: GO:0008209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"androgen metabolic process","synonyms":[{"name":"androgen metabolism","type":"exact"}],"termid":"GO:0008209"}


id: GO:0048453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the sepal. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"sepal morphogenesis","termid":"GO:0048447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal formation","secondary_identifiers":["GO:0048423"],"termid":"GO:0048453"}


id: PBO:0046519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen receptor responsive lncRNA 1","termid":"PBO:0046519"}


id: GO:0018227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form S-12-hydroxyfarnesyl-L-cysteine; formation of S-farnesycysteine may be coupled with subsequent cleavage of a carboxy-terminal tripeptide for the CXXX motif and methyl esterification of the farnesylated cysteine.","definition_xrefs":["RESID:AA0103"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-S-12-hydroxyfarnesyl-L-cysteine biosynthetic process from peptidyl-cysteine (obsolete GO:0018227)","synonyms":[{"name":"peptidyl-S-12-hydroxyfarnesyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-12-hydroxyfarnesyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-12-hydroxyfarnesyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018227"}


id: PBO:0089606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase/lipase, implicated in fatty acid biosynthetic process","termid":"PBO:0089606"}


id: PBO:0050137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 47","termid":"PBO:0050137"}


id: MONDO:0009479
data:
  {"annotated_genes":["SJAG_01253","SJAG_04619"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87672,87673],"is_not":false,"summary":null,"term":"MONDO:0009479"}]},"cv_name":"mondo","definition":"A multiple congenital anomaly characterized by exocrine pancreatic insufficiency, hypoplasia/aplasia of the nasal alae, hypodontia, sensorineural hearing loss, growth retardation, anal and urogenital malformations, and variable intellectual disability.","definition_xrefs":["Orphanet:2315"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic anorectal malformation (obsolete MONDO:0015246)","termid":"MONDO:0015246"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic hypothyroidism (obsolete MONDO:0015778)","termid":"MONDO:0015778"},{"relation_name":"excluded_subClassOf","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"},{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01253":null,"SJAG_04619":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0006025"],"is_obsolete":false,"name":"Johanson-Blizzard syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:59798","MESH:C535880","DOID:14694","GARD:80","icd11.foundation:1427330812","ICD9:759.89","SCTID:75979009","UMLS:C0175692","NORD:1311","OMIM:243800","MESH:C564907","OMIM:260450"],"synonyms":[{"name":"JBS","type":"exact"},{"name":"Johanson-BLIZZARD syndrome","type":"related"},{"name":"Johanson-Blizzard syndrome","type":"exact"},{"name":"nasal alar hypoplasia, hypothyroidism, pancreatic achylia and congenital deafness","type":"related"},{"name":"nasal alar hypoplasia, hypothyroidism, pancreatic achylia, and congenital deafness","type":"related"},{"name":"pancreatic insufficiency, combined exocrine","type":"exact"}],"termid":"MONDO:0009479","terms_by_termid":{"MONDO:0009479":null},"xrefs":{"Monarch":{"xref_id":"0009479"}}}


id: GO:0060888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the epidermis of the limb in space to define a volume in which specific patterns of basal cell, spinous cell and granular cells will differentiate giving rise to the layers of the limb epidermis.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis stratification","termid":"GO:0060888"}


id: PBO:0056764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15 pseudogene 3","termid":"PBO:0056764"}


id: GO:0047877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1R,2S)-ephedrine + NAD+ = (R)-2-methylimino-1-phenylpropan-1-ol + 2 H+ + NADH.","definition_xrefs":["RHEA:16289","EC:1.5.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ephedrine dehydrogenase activity","secondary_identifiers":["MetaCyc:EPHEDRINE-DEHYDROGENASE-RXN","KEGG_REACTION:R03614"],"synonyms":[{"name":"(-)-ephedrine:NAD+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047877"}


id: GO:1905350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Y-shaped link. Two distinct protein complexes are known to be involved in proper linker assembly: the MKS complex and the NPHP complex. Improper assembly of Y-shaped links may cause malfunctioning of the transition zone as a molecular gate.","definition_xrefs":["GO_REF:0000079","PMID:23728985","GOC:TermGenie","GOC:cilia","PMID:24664739","PMID:26595381","PMID:4554367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"Y-shaped link assembly","synonyms":[{"name":"Y-link assembly","type":"related"},{"name":"Y-link formation","type":"related"},{"name":"Y-link structure assembly","type":"related"},{"name":"Y-link structure formation","type":"related"},{"name":"Y-shaped assemblage assembly","type":"related"},{"name":"Y-shaped assemblage formation","type":"related"},{"name":"Y-shaped fiber assembly","type":"related"},{"name":"Y-shaped fiber formation","type":"related"},{"name":"Y-shaped fibre assembly","type":"related"},{"name":"Y-shaped fibre formation","type":"related"},{"name":"Y-shaped link formation","type":"exact"},{"name":"Y-shaped linker assembly","type":"related"},{"name":"Y-shaped linker formation","type":"related"},{"name":"membrane-microtubule complex assembly","type":"related"},{"name":"membrane-microtubule complex formation","type":"related"}],"termid":"GO:1905350"}


id: PBO:0049239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM7 antisense RNA 3","termid":"PBO:0049239"}


id: MONDO:0004530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cervical adenocarcinoma with minimal stromal invasion. The risk of local lymph node metastasis is insignificant and the prognosis is excellent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"early invasive cervical adenocarcinoma","secondary_identifiers":["MEDGEN:232144","NCIT:C36096","DOID:8307","UMLS:C1333369"],"synonyms":[{"name":"cervical microinvasive adenocarcinoma","type":"exact"}],"termid":"MONDO:0004530","xrefs":{"Monarch":{"xref_id":"0004530"}}}


id: SO:0000843
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region which is part of a bacterial RNA polymerase promoter.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000843 bacterial_RNApol_promoter_region (obsolete SO:0000843)","termid":"SO:0000843"}


id: FYPO:0002985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methyl methanesulfonate is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased RNA accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"increased RNA level during cellular response to MMS","type":"exact"},{"name":"increased RNA level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"increased RNA level during cellular response to methyl methanesulphonate","type":"exact"},{"name":"increased mRNA level during cellular response to methyl methanesulfonate","type":"narrow"},{"name":"increased transcript level during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002985"}


id: SO:0000299
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A location where recombination or occurs during mitosis or meiosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_rearrangement_feature","termid":"SO:0000669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific_recombination_site","synonyms":[{"name":"specific recombination site","type":"exact"}],"termid":"SO:0000299"}


id: PBO:0054328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1721","termid":"PBO:0054328"}


id: GO:0000394
data:
  {"annotated_genes":["SJAG_03913","SJAG_01791","SJAG_03328","SJAG_04907","SJAG_00956","SJAG_00754","SJAG_01260"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75609,75547,79740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006388"},{"annotations":[73226,80775,75720,74676],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000379"}]},"cv_name":"biological_process","definition":"Splicing of RNA via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_00956":null,"SJAG_01260":null,"SJAG_01791":null,"SJAG_03328":null,"SJAG_03913":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA splicing, via endonucleolytic cleavage and ligation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mRNA splicing","type":"broad"}],"termid":"GO:0000394","terms_by_termid":{"GO:0000379":null,"GO:0006388":null}}


id: MONDO:1010022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, non-human animal","secondary_identifiers":["OMIA:001041"],"termid":"MONDO:1010022","xrefs":{"Monarch":{"xref_id":"1010022"}}}


id: GO:2001288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of caveolin-mediated endocytosis","termid":"GO:2001286"},{"relation_name":"positively_regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of caveolin-mediated endocytosis","synonyms":[{"name":"positive regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"positive regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"positive regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001288"}


id: MONDO:0024350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pityriasis steatoides","secondary_identifiers":["MEDGEN:698103","ICD9:696.5","SCTID:403426003","UMLS:C1274781"],"synonyms":[{"name":"pityriasis steatoides","type":"exact"}],"termid":"MONDO:0024350","xrefs":{"Monarch":{"xref_id":"0024350"}}}


id: GO:0010140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway by which adenine, hypoxanthine and their nucleosides from purine nucleotides breakdown are converted back to purine nucleotides. The salvage pathway is important where there is no de-novo purine nucleotide biosynthesis.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete adenine, hypoxanthine and their nucleoside salvage (obsolete GO:0010140)","synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"exact"}],"termid":"GO:0010140"}


id: MONDO:0006744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An accumulation of endolymph in the inner ear (labyrinth) leading to buildup of pressure and distortion of intralabyrinthine structures, such as cochlea and semicircular canals. It is characterized by sensorineural hearing loss; tinnitus; and sometimes vertigo.","definition_xrefs":["MESH:D018159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vertigo","termid":"MONDO:0004900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endolymphatic hydrops","secondary_identifiers":["UMLS:C0206586","MEDGEN:60183","ICD9:386.8","EFO:1000918","MedDRA:10049934","DOID:9848","SCTID:27621000119100"],"synonyms":[{"name":"labyrinthine hydrops","type":"exact"}],"termid":"MONDO:0006744","xrefs":{"Monarch":{"xref_id":"0006744"}}}


id: MONDO:0004930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"steroid-induced glaucoma","secondary_identifiers":["ICD9:365.3","MEDGEN:573238","ICD9:365.89","DOID:9946","UMLS:C0339578","SCTID:1654001"],"synonyms":[{"name":"corticosteroid-induced glaucoma","type":"exact"}],"termid":"MONDO:0004930","xrefs":{"Monarch":{"xref_id":"0004930"}}}


id: GO:0021813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction between two cells that modulates the association of a neuronal cell and a glial cell involved in glial-mediated radial cell migration in the cerebral cortex.","definition_xrefs":["GOC:cls","PMID:12626695","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"neuronal-glial interaction involved in cerebral cortex radial glia guided migration","termid":"GO:0021812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021813"}


id: PBO:0063760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 1 pseudogene 1","termid":"PBO:0063760"}


id: PBO:0068291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease T2","termid":"PBO:0068291"}


id: GO:0005747
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex I (obsolete GO:0005747)","termid":"GO:0005747"}


id: PBO:0091517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 3","termid":"PBO:0091517"}


id: MONDO:0027751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete serpinopathy with loss of serpin function (obsolete MONDO:0027751)","secondary_identifiers":["Orphanet:250811"],"termid":"MONDO:0027751","xrefs":{"Monarch":{"xref_id":"0027751"}}}


id: GO:1990491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methane from methanol and hydrogen.","definition_xrefs":["PMID:16347126","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanogenesis, from methanol","termid":"GO:0019387"},{"relation_name":"is_a","term_name":"hydrogen metabolic process","termid":"GO:1902421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methane biosynthetic process from methanol and hydrogen","synonyms":[{"name":"methane biosynthesis from methanol and hydrogen","type":"exact"},{"name":"methanogenesis from methanol and hydrogen","type":"exact"}],"termid":"GO:1990491"}


id: PBO:0086881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor, as suggested by computational analysis; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus and is induced in response to the DNA-damaging agent MMS; overproduction of a truncation allele suppresses lethality due to expression of the dominant PET9 allele AAC2-A128P","termid":"PBO:0086881"}


id: MONDO:0016827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy-growth delay-intellectual disability-hypospadias syndrome","secondary_identifiers":["Orphanet:2601"],"termid":"MONDO:0016827","xrefs":{"Monarch":{"xref_id":"0016827"}}}


id: MONDO:0030810
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88806,88807],"is_not":false,"summary":null,"term":"MONDO:0030810"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0002515"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5676981","MEDGEN:1807702","OMIM:619868"],"synonyms":[{"name":"PFIC10","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 10","type":"exact"}],"termid":"MONDO:0030810","terms_by_termid":{"MONDO:0030810":null},"xrefs":{"Monarch":{"xref_id":"0030810"}}}


id: MONDO:0019264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-N-acetylgalactosaminidase (NAGA) deficiency type 3 is a rare clinically heterogeneous type of NAGA deficiency with developmental, neurologic and psychiatric manifestations presenting at an intermediate age.","definition_xrefs":["Orphanet:79281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-N-acetylgalactosaminidase deficiency","termid":"MONDO:0017779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0037792"],"is_obsolete":false,"name":"alpha-N-acetylgalactosaminidase deficiency type 3","secondary_identifiers":["icd11.foundation:1639349183","MEDGEN:1772900","NANDO:1200137","UMLS:C5437471","SCTID:880066000","DOID:0112320","GARD:3903"],"synonyms":[{"name":"NAGA deficiency type 3","type":"exact"},{"name":"Schindler disease type 3","type":"exact"}],"termid":"MONDO:0019264","xrefs":{"Monarch":{"xref_id":"0019264"}}}


id: PBO:0062626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 3 pseudogene","termid":"PBO:0062626"}


id: GO:0018779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-4,6-dihydroxy-1,3,5-triazine hydrolase activity (obsolete GO:0018779)","synonyms":[{"name":"2-chloro-4,6-dihydroxy-1,3,5-triazine hydrolase activity","type":"exact"}],"termid":"GO:0018779"}


id: MONDO:0044684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tuberculous meningitis (obsolete MONDO:0044684)","termid":"MONDO:0044684","xrefs":{"Monarch":{"xref_id":"0044684"}}}


id: GO:0071210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a protein is incorporated into a membrane raft. Membrane rafts are small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"is_a","term_name":"protein localization to membrane raft","termid":"GO:1903044"},{"relation_name":"part_of","term_name":"membrane raft organization","termid":"GO:0031579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"protein insertion into membrane raft","synonyms":[{"name":"establishment of protein localization to membrane raft","type":"broad"}],"termid":"GO:0071210"}


id: FYPO:0001735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal iron-sulfur cluster transfer","synonyms":[{"name":"abnormal iron-sulfur cluster transfer during mitotic cell cycle","type":"related"},{"name":"abnormal iron-sulfur cluster transfer during vegetative growth","type":"exact"},{"name":"abnormal iron-sulphur cluster transfer","type":"exact"}],"termid":"FYPO:0001735"}


id: GO:0018909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dodecyl sulfate, commonly found as sodium dodecyl sulfate (SDS), a component of a variety of synthetic surfactants.","definition_xrefs":["UM-BBD_pathwayID:dds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"dodecyl sulfate metabolic process","synonyms":[{"name":"dodecyl sulfate metabolism","type":"exact"},{"name":"dodecyl sulphate metabolic process","type":"exact"},{"name":"dodecyl sulphate metabolism","type":"exact"}],"termid":"GO:0018909"}


id: GO:1905619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-(1->3)-fucosyltransferase activity.","definition_xrefs":["GO_REF:0000059","PMID:15364955","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-(1->3)-fucosyltransferase activity","synonyms":[{"name":"regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"regulation of alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:1905619"}


id: PBO:0077936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE pseudogene 2","termid":"PBO:0077936"}


id: FYPO:0001717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malonic acid into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal malonic acid import","synonyms":[{"name":"abnormal malonate import","type":"related"},{"name":"abnormal malonic acid import across plasma membrane","type":"exact"},{"name":"abnormal malonic acid import during mitotic cell cycle","type":"related"},{"name":"abnormal malonic acid import during vegetative growth","type":"exact"},{"name":"abnormal malonic acid import into cell","type":"exact"},{"name":"abnormal malonic acid uptake","type":"exact"}],"termid":"FYPO:0001717"}


id: PBO:0091393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal multispanning membrane protein","termid":"PBO:0091393"}


id: PBO:0089216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination mediator Sfr1","termid":"PBO:0089216"}


id: GO:0001759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ formation","termid":"GO:0003156"},{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"positively_regulates","term_name":"specification of animal organ identity","termid":"GO:0010092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ induction","synonyms":[{"name":"induction of an organ","type":"exact"}],"termid":"GO:0001759"}


id: GO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of complement activation by the lectin pathway.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation, lectin pathway","termid":"GO:0001868"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"negative regulation of complement activation","termid":"GO:0045916"},{"relation_name":"negatively_regulates","term_name":"complement activation, lectin pathway","termid":"GO:0001867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of complement activation, lectin pathway","synonyms":[{"name":"down regulation of complement activation, lectin pathway","type":"exact"},{"name":"down-regulation of complement activation, lectin pathway","type":"exact"},{"name":"downregulation of complement activation, lectin pathway","type":"exact"},{"name":"inhibition of complement activation, lectin pathway","type":"narrow"},{"name":"negative regulation of complement cascade, lectin pathway","type":"exact"}],"termid":"GO:0001869"}


id: GO:0009614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete disease resistance (obsolete GO:0009614)","synonyms":[{"name":"disease resistance","type":"exact"}],"termid":"GO:0009614"}


id: MONDO:0001148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thrombophlebitis that involves the iliac vein.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombophlebitis","termid":"MONDO:0002800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iliac vein thrombophlebitis","secondary_identifiers":["UMLS:C0347887","DOID:10880","MEDGEN:578307","ICD9:451.81","SCTID:42861008"],"synonyms":[{"name":"iliac vein thrombophlebitis","type":"exact"},{"name":"phlebitis and thrombophlebitis of the iliac vein","type":"exact"},{"name":"thrombophlebitis of iliac vein","type":"exact"}],"termid":"MONDO:0001148","xrefs":{"Monarch":{"xref_id":"0001148"}}}


id: GO:0045592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovarian cumulus cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"regulation of antral ovarian follicle growth","termid":"GO:2000387"},{"relation_name":"regulates","term_name":"cumulus cell differentiation","termid":"GO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cumulus cell differentiation","synonyms":[{"name":"regulation of ovarian cumulus cell differentiation","type":"exact"}],"termid":"GO:0045592"}


id: PBO:0061958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 14","termid":"PBO:0061958"}


id: GO:0009710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tropane alkaloids, compounds containing the 8-methyl-8-azabicyclo(3.2.1)octane ring system.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"tropane alkaloid metabolic process","termid":"GO:0046448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"tropane alkaloid biosynthetic process","synonyms":[{"name":"tropane alkaloid anabolism","type":"exact"},{"name":"tropane alkaloid biosynthesis","type":"exact"},{"name":"tropane alkaloid formation","type":"exact"},{"name":"tropane alkaloid synthesis","type":"exact"}],"termid":"GO:0009710"}


id: PBO:0039629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A11","termid":"PBO:0039629"}


id: PBO:0029132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_separation_after_meiosis","termid":"PBO:0029132"}


id: PBO:0051502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of HORMAD1 1","termid":"PBO:0051502"}


id: PBO:0091494
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hal3 N-term functionally complements S. cerevisiae HAL3","termid":"PBO:0091494"}


id: PBO:0083863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fatty acid elongase, involved in sphingolipid biosynthesis; acts on fatty acids of up to 24 carbons in length; mutations have regulatory effects on 1,3-beta-glucan synthase, vacuolar ATPase, and the secretory pathway; ELO2 has a paralog, ELO1, that arose from the whole genome duplication; lethality of the elo2 elo3 double null mutation is functionally complemented by human ELOVL1 and weakly complemented by human ELOVL3 or ELOV7","termid":"PBO:0083863"}


id: MONDO:0007547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common type of cutaneous cyst. It results from the proliferation of epidermal cells in a circumscribed space within the dermis. It is usually asymptomatic and presents as a firm, round nodule.","definition_xrefs":["NCIT:C3134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermoid cysts","secondary_identifiers":["MEDGEN:41829","OMIM:131600","MESH:D004814","UMLS:C0014511","SCTID:419893006"],"synonyms":[{"name":"Epidermal cyst","type":"exact"},{"name":"Follicular infundibular cyst","type":"exact"},{"name":"epidermal inclusion cyst","type":"exact"},{"name":"epidermoid cyst","type":"exact"},{"name":"epidermoid cysts","type":"exact"},{"name":"epithelial cyst","type":"exact"},{"name":"horn cyst","type":"exact"},{"name":"inclusion cyst","type":"exact"},{"name":"infundibular cyst","type":"exact"},{"name":"keratin cyst","type":"exact"},{"name":"keratinizing cyst","type":"exact"},{"name":"keratinous cyst","type":"exact"},{"name":"squamous cyst","type":"exact"}],"termid":"MONDO:0007547","xrefs":{"Monarch":{"xref_id":"0007547"}}}


id: FYPO:0004671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the vacuole is abolished when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to vacuole during nitrogen starvation","synonyms":[{"name":"abolished protein localisation to vacuole during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to vacuole during nitrogen depletion","type":"exact"},{"name":"abolished protein localization to vacuole during nitrogen deprivation","type":"exact"},{"name":"protein localization to vacuole abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004671"}


id: GO:0030131
data:
  {"annotated_genes":["SJAG_01809","SJAG_00800","SJAG_01167","SJAG_00379","SJAG_04565","SJAG_00104","SJAG_02805","SJAG_04931","SJAG_04609"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64515],"is_not":false,"summary":null,"term":"GO:0030131"},{"annotations":[114984,62748,114772,79419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030121"},{"annotations":[58571,110292,76236,80063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A membrane coat adaptor complex that links clathrin to a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"},{"relation_name":"part_of","term_name":"clathrin coat","termid":"GO:0030118"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02805":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"clathrin adaptor complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030131","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030131":null}}


id: FYECO:0000226
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leucine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ leu","synonyms":[{"name":"leucine added","type":"exact"}],"termid":"FYECO:0000226"}


id: GO:0003796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the beta-(1->4) linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan.","definition_xrefs":["PMID:22748813","EC:3.2.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"lysozyme activity","secondary_identifiers":["Reactome:R-HSA-8862320","MetaCyc:3.2.1.17-RXN"],"synonyms":[{"name":"1,4-N-acetylmuramidase activity","type":"exact"},{"name":"L-7001","type":"related"},{"name":"N,O-diacetylmuramidase activity","type":"exact"},{"name":"PR1-lysozyme","type":"related"},{"name":"globulin G","type":"related"},{"name":"globulin G1","type":"related"},{"name":"lysozyme g","type":"related"},{"name":"mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"mucopeptide glucohydrolase activity","type":"exact"},{"name":"muramidase activity","type":"exact"},{"name":"peptidoglycan N-acetylmuramoylhydrolase activity","type":"related"}],"termid":"GO:0003796"}


id: PBO:0014597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF complex corepressor Yox1","termid":"PBO:0014597"}


id: PBO:0001592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug66","termid":"PBO:0001592"}


id: PBO:0050327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 29","termid":"PBO:0050327"}


id: GO:0090218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of kinase activity","termid":"GO:0033674"},{"relation_name":"is_a","term_name":"regulation of lipid kinase activity","termid":"GO:0043550"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid kinase activity","termid":"GO:0090218"}


id: MONDO:0001059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal lymphoma that arises from the stomach with the bulk of the mass located in the stomach. The vast majority of cases are diffuse large B-cell lymphomas and B-cell lymphomas of the mucosa-associated lymphoid tissue.","definition_xrefs":["NCIT:C4636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"},{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric lymphoma","secondary_identifiers":["UMLS:C0349532","MEDGEN:87603","DOID:10540","ICD9:202.83","SCTID:276811008","NORD:1607"],"synonyms":[{"name":"Primary Gastric Lymphoma","type":"exact"},{"name":"gastric lymphoma","type":"exact"},{"name":"lymphoma of stomach","type":"exact"},{"name":"lymphoma of the stomach","type":"exact"},{"name":"primary gastric lymphoma","type":"exact"},{"name":"stomach lymphoma","type":"exact"}],"termid":"MONDO:0001059","xrefs":{"Monarch":{"xref_id":"0001059"}}}


id: FYPO:0003984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of an amino acid measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered cellular amino acid level during vegetative growth","synonyms":[{"name":"abnormal cellular amino acid level during vegetative growth","type":"exact"},{"name":"altered cellular amino acid level during mitotic cell cycle","type":"related"},{"name":"altered level of amino acid in cell","type":"exact"}],"termid":"FYPO:0003984"}


id: PBO:0081867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 805","termid":"PBO:0081867"}


id: GO:0050532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-O-phospho-3-sulfolactate + H2O = (R)-3-sulfolactate + phosphate.","definition_xrefs":["EC:3.1.3.71","RHEA:23416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-phosphosulfolactate phosphatase activity","secondary_identifiers":["MetaCyc:R229-RXN","KEGG_REACTION:R05789"],"synonyms":[{"name":"(2R)-phosphosulfolactate phosphohydrolase activity","type":"related"},{"name":"(R)-2-phospho-3-sulfolactate phosphohydrolase activity","type":"related"},{"name":"2-phosphosulpholactate phosphatase activity","type":"exact"},{"name":"ComB phosphatase activity","type":"related"}],"termid":"GO:0050532"}


id: GO:0001156
data:
  {"annotated_genes":["SJAG_03007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73579],"is_not":false,"summary":null,"term":"GO:0001156"}]},"cv_name":"molecular_function","definition":"Binding to a general RNA polymerase III transcription factor belonging to the TFIIC complex, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase III.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III general transcription initiation factor binding","termid":"GO:0001025"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TFIIIC-class transcription factor complex binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"TFIIIC-class transcription factor binding","type":"exact"}],"termid":"GO:0001156","terms_by_termid":{"GO:0001156":null}}


id: PBO:0004084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO","termid":"PBO:0004084"}


id: PBO:0083497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL210W/PEX2","termid":"PBO:0083497"}


id: MONDO:0023235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete giant congenital nevus (obsolete MONDO:0023235)","termid":"MONDO:0023235","xrefs":{"Monarch":{"xref_id":"0023235"}}}


id: PBO:0070825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 3","termid":"PBO:0070825"}


id: GO:0033774
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region in the lower half of some cells formed from extensive infoldings of the basal plasma membrane; includes cytoplasm adjacent to the infolded membrane.","definition_xrefs":["PMID:11640882","GOC:mah","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"basal part of cell","termid":"GO:0045178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal labyrinth","termid":"GO:0033774"}


id: GO:0032696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-13 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-13 production","termid":"GO:0032656"},{"relation_name":"negatively_regulates","term_name":"interleukin-13 production","termid":"GO:0032616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-13 production","secondary_identifiers":["GO:2000666","GO:0045367"],"synonyms":[{"name":"down regulation of interleukin-13 production","type":"exact"},{"name":"down-regulation of interleukin-13 production","type":"exact"},{"name":"downregulation of interleukin-13 production","type":"exact"},{"name":"inhibition of interleukin-13 production","type":"narrow"},{"name":"negative regulation of IL-13 production","type":"exact"},{"name":"negative regulation of interleukin-13 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-13 secretion","type":"narrow"}],"termid":"GO:0032696"}


id: GO:0099624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across the plasma membrane of an atrial cardiac muscle cell such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell membrane repolarization","termid":"GO:0099622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell membrane repolarization","termid":"GO:0099624"}


id: PR:Q9C0V4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB7E8.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0V4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB7E8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB7E8.02","synonyms":[{"name":"Spom972h-SPBPB7E8.02","type":"exact"}],"termid":"PR:Q9C0V4"}


id: GO:2000324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclear receptor-mediated glucocorticoid signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of nuclear receptor-mediated glucocorticoid signaling pathway","termid":"GO:2000322"},{"relation_name":"positively_regulates","term_name":"nuclear receptor-mediated glucocorticoid signaling pathway","termid":"GO:0042921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclear receptor-mediated glucocorticoid signaling pathway","synonyms":[{"name":"positive regulation of glucocorticoid receptor signaling pathway","type":"exact"},{"name":"positive regulation of glucocorticoid receptor signalling pathway","type":"exact"}],"termid":"GO:2000324"}


id: PR:Q92353
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin carboxyl-terminal hydrolase 14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01361","PANTHER:PTHR24006:SF39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.08","secondary_identifiers":["UniProtKB:Q92353"],"synonyms":[{"name":"Spom972h-USP14","type":"exact"},{"name":"deubiquitinating enzyme 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thiollesterase 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92353"}


id: MONDO:0000090
data:
  {"annotated_genes":["SJAG_04816","SJAG_06022","SJAG_02050","SJAG_02658","SJAG_04183","SJAG_00885","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[88366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[87000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[87369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[88181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[86962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[88252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[87894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia","termid":"MONDO:0005181"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02050":null,"SJAG_02658":null,"SJAG_04183":null,"SJAG_04665":null,"SJAG_04816":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:157640"],"synonyms":[{"name":"progressive external ophthalmoplegia with mtDNA deletions","type":"exact"}],"termid":"MONDO:0000090","terms_by_termid":{"MONDO:0009783":null,"MONDO:0012238":null,"MONDO:0013117":null,"MONDO:0014062":null,"MONDO:0014656":null,"MONDO:0020845":null,"MONDO:0024528":null,"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0000090"}}}


id: PBO:0055093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2511","termid":"PBO:0055093"}


id: PR:O74500
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup60 gene.","definition_xrefs":["UniProtKB:O74500","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup60 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.13c","synonyms":[{"name":"Spom972h-nup60","type":"exact"},{"name":"nuclear pore protein nup60 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74500"}


id: MONDO:0009416
data:
  {"annotated_genes":["SJAG_04206","SJAG_02426","SJAG_04394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86886,86887,86888],"is_not":false,"summary":null,"term":"MONDO:0009416"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"is_obsolete":false,"name":"hypoinsulinemic hypoglycemia and body hemihypertrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:480014","GARD:17352","OMIM:240900","DOID:0112263","UMLS:C3278384","Orphanet:293964"],"synonyms":[{"name":"HIHGHH","type":"related"},{"name":"hypoinsulinemic hypoglycemia with hemihypertrophy","type":"related"}],"termid":"MONDO:0009416","terms_by_termid":{"MONDO:0009416":null},"xrefs":{"Monarch":{"xref_id":"0009416"}}}


id: PBO:0001848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase with bromodomain protein (predicted)","termid":"PBO:0001848"}


id: GO:0097691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Small membrane vesicle (< 1 um) that buds off a prokaryotic cell plasma membrane, able to carry proteins, phospholipids, lipopolysaccharides, nucleic acids, viruses, and more. Important in intercellular communication and pathogenesis; can exist within host cells.","definition_xrefs":["PMID:25704309","GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"bacterial extracellular vesicle","termid":"GO:0097691"}


id: PBO:0031091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_chromosome_fragmentation_upon_segregation","termid":"PBO:0031091"}


id: GO:0090703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which a three-stranded D-loop DNA is unwound or 'melted'.","definition_xrefs":["PMID:26503245"],"gene_count":0,"genotype_count":0,"name":"obsolete triplex DNA unwinding (obsolete GO:0090703)","termid":"GO:0090703"}


id: GO:0009277
data:
  {"annotated_genes":["SJAG_01755","SJAG_01288","SJAG_03828","SJAG_04723","SJAG_01290","SJAG_01321","SJAG_04771","SJAG_02945","SJAG_02192","SJAG_01970","SJAG_03903","SJAG_04236","SJAG_02135","SJAG_02649","SJAG_06621","SJAG_01086","SJAG_03013","SJAG_02478","SJAG_01017","SJAG_00620","SJAG_02093","SJAG_04864","SJAG_04067","SJAG_00218","SJAG_03483","SJAG_01975","SJAG_04238","SJAG_04720","SJAG_03057","SJAG_00239","SJAG_03295","SJAG_02222","SJAG_00096","SJAG_01028","SJAG_00340","SJAG_04327","SJAG_00027","SJAG_00876","SJAG_02916","SJAG_04184","SJAG_00784","SJAG_04073","SJAG_03204","SJAG_06622","SJAG_01835"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73088,74296,75129,75301,76293,78222,78465,79704,91766,91963,93450,95880,103428,104370,108046,108641,110877,110878,110879,110880,110881,110882,110883,115327,115328,116475,116754,117606,117629,119791,120367],"is_not":false,"summary":null,"term":"GO:0009277"},{"annotations":[119799,116076,92088,111036,116370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005619"},{"annotations":[58676,65205],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043188"},{"annotations":[93626],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[104638,108805,104894,118570,104893],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070263"},{"annotations":[89338],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"}]},"cv_name":"cellular_component","definition":"A rigid yet dynamic structure surrounding the plasma membrane that affords protection from stresses and contributes to cell morphogenesis, consisting of extensively cross-linked glycoproteins and carbohydrates. The glycoproteins may be modified with N- or O-linked carbohydrates, or glycosylphosphatidylinositol (GPI) anchors; the polysaccharides are primarily branched glucans, including beta-linked and alpha-linked glucans, and may also include chitin and other carbohydrate polymers, but not cellulose or pectin. Enzymes involved in cell wall biosynthesis are also found in the cell wall. Note that some forms of fungi develop a capsule outside of the cell wall under certain circumstances; this is considered a separate structure.","definition_xrefs":["ISBN:3540601864","PMID:16927300","PMID:3319422","PMID:11283274","GOC:mcc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00096":null,"SJAG_00218":null,"SJAG_00239":null,"SJAG_00340":null,"SJAG_00620":null,"SJAG_00784":null,"SJAG_00876":null,"SJAG_01017":null,"SJAG_01028":null,"SJAG_01086":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01755":null,"SJAG_01835":null,"SJAG_01970":null,"SJAG_01975":null,"SJAG_02093":null,"SJAG_02135":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_02916":null,"SJAG_02945":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03204":null,"SJAG_03295":null,"SJAG_03483":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04067":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04327":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"fungal-type cell wall","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"beta-glucan-containing cell wall","type":"related"},{"name":"chitin- and beta-glucan-containing cell wall","type":"narrow"},{"name":"chitin-containing cell wall","type":"related"}],"termid":"GO:0009277","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null,"GO:0009277":null,"GO:0043188":null,"GO:0070263":null}}


id: GO:0140536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transcription corepressor activity that represses or decreases the transcription of specific gene sets via binding to a DNA-bound nuclear receptor, either on its own or as part of a complex. Nuclear receptor corepressors often act by altering chromatin structure and modifications. For example, one class of transcription nuclear receptor corepressors modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators.","definition_xrefs":["PMID:7566126","PMID:9238851","PMID:7566114"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear receptor corepressor activity (obsolete GO:0140536)","synonyms":[{"name":"nuclear corepressor activity","type":"broad"}],"termid":"GO:0140536"}


id: PBO:0073379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sestrin 3","termid":"PBO:0073379"}


id: GO:0030622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U4atac small nuclear RNA (U4atac snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"U4atac snRNA binding","termid":"GO:0030622"}


id: GO:0045601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell differentiation","termid":"GO:0045601"}


id: PR:P46960
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A geranylgeranyl transferase type-2 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00626","PANTHER:PTHR11774:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyl transferase type-2 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.02","secondary_identifiers":["UniProtKB:P46960"],"synonyms":[{"name":"GGTase-II-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RABGGTB","type":"exact"},{"name":"geranylgeranyl transferase type II subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type II protein geranyl-geranyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P46960"}


id: GO:0072132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesenchymal tissue are generated and organized. A mesenchymal tissue is made up of loosely packed stellate cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme morphogenesis","termid":"GO:0072132"}


id: GO:1905548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","GOC:TermGenie","GOC:nc","PMID:25819580"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of subtelomeric heterochromatin assembly (obsolete GO:1905548)","synonyms":[{"name":"down regulation of telomeric heterochromatin assembly","type":"related"},{"name":"down regulation of telomeric heterochromatin formation","type":"related"},{"name":"down-regulation of telomeric heterochromatin assembly","type":"related"},{"name":"down-regulation of telomeric heterochromatin formation","type":"related"},{"name":"downregulation of telomeric heterochromatin assembly","type":"related"},{"name":"downregulation of telomeric heterochromatin formation","type":"related"},{"name":"inhibition of telomeric heterochromatin assembly","type":"narrow"},{"name":"inhibition of telomeric heterochromatin formation","type":"narrow"},{"name":"negative regulation of telomeric heterochromatin assembly","type":"related"},{"name":"negative regulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905548"}


id: PBO:0083903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin adenine dinucleotide transporter; required for uptake of FAD into endoplasmic reticulum; involved in cell wall maintenance; FLC1 has a paralog, FLC3, that arose from the whole genome duplication","termid":"PBO:0083903"}


id: PBO:0029093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_4-nitroquinoline_N-oxide","termid":"PBO:0029093"}


id: PBO:0047168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 1","termid":"PBO:0047168"}


id: PBO:0075432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANXA2 overlapping transcript 1","termid":"PBO:0075432"}


id: PBO:0088385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent oxidoreductase involved in late endosome to Golgi transport","termid":"PBO:0088385"}


id: PBO:0114522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex WD repeat subunit, Pcf2","termid":"PBO:0114522"}


id: PBO:0040787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed X-linked 4","termid":"PBO:0040787"}


id: PBO:0088671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex mu subunit Apm4","termid":"PBO:0088671"}


id: PBO:0072062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11","termid":"PBO:0072062"}


id: PBO:0071475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 16","termid":"PBO:0071475"}


id: PBO:0072055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 25","termid":"PBO:0072055"}


id: PBO:0077596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 7","termid":"PBO:0077596"}


id: PBO:0056617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDS1 and EVI1 complex locus","termid":"PBO:0056617"}


id: GO:0047365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin 3-sulfate = adenosine 3',5'-diphosphate + H+ + quercetin 3,3'-disulfate.","definition_xrefs":["EC:2.8.2.26","RHEA:22504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"quercetin-3-sulfate 3'-sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R02632","MetaCyc:2.8.2.26-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3-sulfate 3'-sulfotransferase activity","type":"related"},{"name":"3'-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3-sulfate 3'-sulfotransferase activity","type":"related"},{"name":"flavonol 3'-sulfotransferase activity","type":"related"},{"name":"quercetin-3-sulphate 3'-sulphotransferase activity","type":"exact"}],"termid":"GO:0047365"}


id: PBO:0003276
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.9","termid":"PBO:0003276"}


id: FYPO:0007922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cysteine  above normal physiological concentrations. Cells stop growing (and may die) at a concentration of cysteine that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to cysteine","synonyms":[{"name":"sensitive to cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0007922"}


id: GO:0106069
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SUMO-E3 ligase complex capable of promoting synapsis, the meiotic cell cycle process where side by side pairing and physical juxtaposition of homologous chromosomes is created during meiotic prophase.","definition_xrefs":["PMID:16847351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"synapsis initiation complex","termid":"GO:0106069"}


id: GO:0072006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nephron over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron development","synonyms":[{"name":"nephrogenesis","type":"related"}],"termid":"GO:0072006"}


id: MONDO:0013198
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88295,88296],"is_not":false,"summary":null,"term":"MONDO:0013198"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the MYH6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1EE","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15639","DOID:0110453","MESH:C567683","OMIM:613252","MEDGEN:412965","UMLS:C2750466"],"synonyms":[{"name":"CMD1EE","type":"exact"},{"name":"MYH6 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1EE","type":"related"},{"name":"cardiomyopathy, dilated, type 1Ee","type":"exact"},{"name":"dilated cardiomyopathy type 1EE","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in MYH6","type":"exact"}],"termid":"MONDO:0013198","terms_by_termid":{"MONDO:0013198":null},"xrefs":{"Monarch":{"xref_id":"0013198"}}}


id: MONDO:1011309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Connective tissue disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309","xrefs":{"Monarch":{"xref_id":"1011309"}}}


id: PBO:0029550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell_at_low_temperature","termid":"PBO:0029550"}


id: PBO:0064020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 54","termid":"PBO:0064020"}


id: PBO:0058412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4781","termid":"PBO:0058412"}


id: PBO:0065465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 7 pseudogene 1","termid":"PBO:0065465"}


id: SO:0000919
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to substitute an I for an A.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000919 substitute_A_to_I (obsolete SO:0000919)","synonyms":[{"name":"substitute A to I","type":"exact"}],"termid":"SO:0000919"}


id: PBO:0084503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein that localizes to chromosomes; prevents synapsis between nonhomologous chromosomes and ensures synapsis between homologs; forms complex with Mnd1p to promote homolog pairing and meiotic double-strand break repair; heterodimer of Hop2p-Mnd1p stimulates the Dmc1p-mediated strand invasion","termid":"PBO:0084503"}


id: MONDO:1012027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bleeding disorder, non-human animal","termid":"MONDO:1011685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, dog","secondary_identifiers":["OMIA:000113-9615"],"termid":"MONDO:1012027","xrefs":{"Monarch":{"xref_id":"1012027"}}}


id: GO:0034896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-formiminopyruvate + H2O = 3-formylpyruvate + HN3.","definition_xrefs":["UM-BBD_reactionID:r1400"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-formiminopyruvate hydrolase activity (obsolete GO:0034896)","termid":"GO:0034896"}


id: MONDO:0022770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circumscribed cutaneous aplasia of the vertex","termid":"MONDO:0022770","xrefs":{"Monarch":{"xref_id":"0022770"}}}


id: FYECO:0000251
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amitrole (3-amino-1,2,4-triazole) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ amitrole","synonyms":[{"name":"+ 3-AT","type":"exact"},{"name":"+ 3-amino-1,2,4-triazole","type":"exact"},{"name":"+ 3AT","type":"exact"}],"termid":"FYECO:0000251"}


id: PR:O42978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20971:SF0","OMA:SCHPO03650","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.09","secondary_identifiers":["UniProtKB:O42978"],"synonyms":[{"name":"Spom972h-LSM5","type":"exact"}],"termid":"PR:O42978"}


id: GO:0140359
data:
  {"annotated_genes":["SJAG_03363","SJAG_03850","SJAG_02602","SJAG_01344","SJAG_05213","SJAG_03497","SJAG_04277","SJAG_02457","SJAG_03785"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57938,72648],"is_not":false,"summary":null,"term":"GO:0140359"},{"annotations":[91118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140481"},{"annotations":[110632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[77410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015421"},{"annotations":[98946,120227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044604"},{"annotations":[97957,119968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"}]},"cv_name":"molecular_function","definition":"Primary active transporter characterized by two nucleotide-binding domains and two transmembrane domains. Uses the energy generated from ATP hydrolysis to drive the transport of a substance across a membrane.","definition_xrefs":["PMID:26517899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_02457":null,"SJAG_02602":null,"SJAG_03363":null,"SJAG_03497":null,"SJAG_03785":null,"SJAG_03850":null,"SJAG_04277":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9750656","Reactome:R-HSA-266070","TC:3.A.1","Reactome:R-HSA-5387389","Wikipedia:ATP-binding_cassette_transporter","Reactome:R-HSA-429157","Reactome:R-HSA-9661405","Reactome:R-HSA-5362459"],"synonyms":[{"name":"ABC transporter","type":"exact"},{"name":"ABC-type efflux permease activity","type":"exact"},{"name":"ABC-type efflux porter activity","type":"exact"},{"name":"ABC-type transmembrane transporter activity","type":"exact"},{"name":"ABC-type uptake permease activity","type":"exact"},{"name":"ATP binding cassette transporter","type":"exact"},{"name":"ATP-binding cassette (ABC) transporter activity","type":"exact"},{"name":"ATP-binding cassette transporter","type":"exact"}],"termid":"GO:0140359","terms_by_termid":{"GO:0008559":null,"GO:0015410":null,"GO:0015421":null,"GO:0044604":null,"GO:0140359":null,"GO:0140481":null}}


id: PBO:0047190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 207 member C, pseudogene","termid":"PBO:0047190"}


id: PBO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1","termid":"PBO:0050588"}


id: PBO:0028427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_sodium_fluoride","termid":"PBO:0028427"}


id: GO:0044296
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal specialization found in some types of dendrites which consists of numerous small terminal branches, giving the dendrite a tufted appearance.","definition_xrefs":["NIF_Subcellular:sao1340260079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic tuft","synonyms":[{"name":"dendrite tuft","type":"exact"}],"termid":"GO:0044296"}


id: MONDO:0008922
data:
  {"annotated_genes":["SJAG_00404"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87523],"is_not":false,"summary":null,"term":"MONDO:0008922"}]},"cv_name":"mondo","definition":"Congenital cataract - hypertrophic cardiomyopathy - mitochrondrial myopathy (CCM) is a mitochondrial disease characterized by cataracts, hypertrophic cardiomyopathy, muscle weakness and lactic acidosis after exercise.","definition_xrefs":["Orphanet:1369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial substrate carrier disorder","termid":"MONDO:0016801"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0002525","MONDO:0005267"],"is_obsolete":false,"name":"Sengers syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1142","SCTID:717812000","UMLS:C1859317","MEDGEN:395228","OMIM:212350","MESH:C538280","DOID:0080132"],"synonyms":[{"name":"Sengers syndrome","type":"exact"},{"name":"cardiomyopathic mitochondrial DNA depletion syndrome 10","type":"related"},{"name":"cardiomyopathy and cataract","type":"related"},{"name":"cataract and cardiomyopathy","type":"related"},{"name":"congenital cataract-hypertrophic cardiomyopathy-mitochondrial myopathy syndrome","type":"related"},{"name":"mitochondrial DNA depletion syndrome 10","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 10 (Cardiomyopathic type)","type":"related"}],"termid":"MONDO:0008922","terms_by_termid":{"MONDO:0008922":null},"xrefs":{"Monarch":{"xref_id":"0008922"}}}


id: PBO:0038581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and BTB domain containing 1","termid":"PBO:0038581"}


id: PBO:0065238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 6","termid":"PBO:0065238"}


id: SO:0001728
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein may be dimethylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_dimethylation_site","synonyms":[{"name":"H3K9 di-methylation site","type":"exact"},{"name":"H3K9Me2","type":"related"}],"termid":"SO:0001728"}


id: MONDO:0013190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital factor XIII deficiency","termid":"MONDO:0018029"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor XIII, b subunit, deficiency of","secondary_identifiers":["OMIM:613235","GARD:15635","MESH:C567688","UMLS:C2750481","MEDGEN:442490"],"synonyms":[{"name":"factor XIII, b subunit, deficiency of","type":"exact"},{"name":"factor XIIIB deficiency","type":"exact"}],"termid":"MONDO:0013190","xrefs":{"Monarch":{"xref_id":"0013190"}}}


id: PBO:0053936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1235","termid":"PBO:0053936"}


id: PBO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.33","termid":"PBO:0002517"}


id: PBO:0070775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 5","termid":"PBO:0070775"}


id: MONDO:0019122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic acute eosinophilic pneumonia (IAEP) is an eosinophilic pneumonia of undetermined etiology that is characterized by acute febrile hypoxic respiratory failure associated with diffuse radiographic infiltrates and pulmonary eosinophilia, but without concurring allergy or infection.","definition_xrefs":["Orphanet:724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary eosinophilia","termid":"MONDO:0004802"},{"relation_name":"is_a","term_name":"idiopathic hypereosinophilic syndrome","termid":"MONDO:0011895"},{"relation_name":"is_a","term_name":"idiopathic eosinophilic pneumonia","termid":"MONDO:0015927"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"idiopathic acute eosinophilic pneumonia","secondary_identifiers":["MEDGEN:1371970","NORD:728","GARD:519","SCTID:64936001","UMLS:C4518469","DOID:9503","icd11.foundation:1455309767","NCIT:C35301"],"synonyms":[{"name":"Acute Eosinophilic Pneumonia","type":"exact"},{"name":"IAEP","type":"exact"},{"name":"Loeffler syndrome","type":"exact"},{"name":"Loeffler's pneumonia","type":"exact"},{"name":"Loffler syndrome","type":"exact"},{"name":"Loffler's syndrome","type":"exact"},{"name":"Löffler syndrome","type":"exact"},{"name":"pulmonary infiltrates with eosinophilia","type":"related"}],"termid":"MONDO:0019122","xrefs":{"Monarch":{"xref_id":"0019122"}}}


id: PBO:0089040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase, Adh1-like","termid":"PBO:0089040"}


id: GO:1902276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic amylase secretion.","definition_xrefs":["GOC:jc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"pancreatic amylase secretion","termid":"GO:0036395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of pancreatic amylase secretion","termid":"GO:1902276"}


id: PBO:0062004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 4 pseudogene","termid":"PBO:0062004"}


id: PBO:0036495
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose metabolism cluster","termid":"PBO:0036495"}


id: GO:0033994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1->4)-beta-D-glucuronan = an oligosaccharide with 4-deoxy-beta-D-gluc-4-enuronosyl end + (1->4)-beta-D-glucuronan. This reaction is the eliminative cleavage of (1->4)-beta-D-glucuronans to give oligosaccharides with 4-deoxy-beta-D-gluc-4-enuronosyl groups at their non-reducing ends. Complete degradation of glucuronans results in the formation of tetrasaccharides.","definition_xrefs":["EC:4.2.2.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucuronan lyase activity","secondary_identifiers":["MetaCyc:4.2.2.14-RXN"],"synonyms":[{"name":"(1,4)-beta-D-glucuronan lyase activity","type":"related"}],"termid":"GO:0033994"}


id: PBO:0055998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM1 homolog, mRNA degradation associated pseudogene 1","termid":"PBO:0055998"}


id: FYPO:0003891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intragenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PMID:11104907","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal intragenic meiotic recombination","synonyms":[{"name":"normal meiotic intragenic recombination","type":"exact"}],"termid":"FYPO:0003891"}


id: GO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","secondary_identifiers":["EC:1.10.3.-"],"synonyms":[{"name":"laccase activity","type":"related"}],"termid":"GO:0016682"}


id: MONDO:0012511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A female reproductive system disease characterized by rupture of chorioamniotic membranes before 37 weeks of gestation.","definition_xrefs":["DOID:0111144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preterm premature rupture of the membranes","secondary_identifiers":["SCTID:312974005","UMLS:C0729264","OMIM:610504","MEDGEN:147582","MESH:C563032","NCIT:C92862"],"synonyms":[{"name":"PPROM","type":"exact"},{"name":"preterm premature rupture of the membranes","type":"exact"},{"name":"preterm premature rupture of the membranes, susceptibility to","type":"exact"}],"termid":"MONDO:0012511","xrefs":{"Monarch":{"xref_id":"0012511"}}}


id: GO:0046204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nor-spermidine metabolic process","synonyms":[{"name":"nor-spermidine metabolism","type":"exact"}],"termid":"GO:0046204"}


id: PBO:0080750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-box binding protein 1","termid":"PBO:0080750"}


id: PBO:0059773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 47","termid":"PBO:0059773"}


id: MONDO:0000560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia type 4 (obsolete MONDO:0000560)","termid":"MONDO:0000560","xrefs":{"Monarch":{"xref_id":"0000560"}}}


id: MOD:02067
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-cysteine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}


id: PBO:0042048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 105","termid":"PBO:0042048"}


id: PATO:0000688
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's not occurring or existing at the same time or having the same period or phase.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous","termid":"PATO:0000688"}


id: GO:0061935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a sperm, with the plasma membrane of the oocyte as part of the process of double fertilization forming two zygotes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"plasma membrane fusion","termid":"GO:0045026"},{"relation_name":"part_of","term_name":"double fertilization forming two zygotes","termid":"GO:0009677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"fusion of sperm to egg plasma membrane involved in double fertilization forming two zygotes","termid":"GO:0061935"}


id: PBO:0081239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 8","termid":"PBO:0081239"}


id: PBO:0017591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transmembrane transporter Thi9","termid":"PBO:0017591"}


id: GO:0000466
data:
  {"annotated_genes":["SJAG_02250","SJAG_03179","SJAG_03952","SJAG_00965","SJAG_01581","SJAG_01191","SJAG_04582","SJAG_00854","SJAG_03789","SJAG_02275","SJAG_04524","SJAG_04174","SJAG_01818","SJAG_04321","SJAG_01623","SJAG_04289","SJAG_06613","SJAG_02553","SJAG_04824","SJAG_04818","SJAG_01551","SJAG_00897","SJAG_03796","SJAG_03234","SJAG_00772","SJAG_04188","SJAG_02993","SJAG_04153","SJAG_04492","SJAG_02644","SJAG_01521","SJAG_03745","SJAG_00882","SJAG_02374","SJAG_02547","SJAG_00722","SJAG_02861","SJAG_00955","SJAG_04916","SJAG_04369","SJAG_00081","SJAG_04084","SJAG_03425","SJAG_04006","SJAG_02830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62174,63770,80011,80538,99872],"is_not":false,"summary":null,"term":"GO:0000466"},{"annotations":[73289,96839,106039,93555],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[120624,80095,117395,110970,106708,115480,105048,107598,106490,96584,98391,76307,73681,60813,74691,72113,72984,98681,107597,116199,117307],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[73390,117885,74220,100837,109406,76859,79481,99132,81266,103995,117445,91821,108413,72385,73087],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000467"},{"annotations":[109407],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5.8S rRNA","termid":"GO:0000460"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00722":null,"SJAG_00772":null,"SJAG_00854":null,"SJAG_00882":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_01818":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_02830":null,"SJAG_02861":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03745":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04174":null,"SJAG_04188":null,"SJAG_04289":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000466","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000465":null,"GO:0000466":null,"GO:0000467":null}}


id: PBO:0049168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 related adaptor protein 2","termid":"PBO:0049168"}


id: PBO:0074508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAP associated protein","termid":"PBO:0074508"}


id: GO:0030592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of an ADP-ribosyl group to a residue in double-stranded DNA.","definition_xrefs":["PMID:27471034","PMID:29361132","PMID:11592983","PMID:29520010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA ADP-ribosylation","termid":"GO:0030592"}


id: MONDO:0000235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Rocky mountain spotted fever (obsolete MONDO:0000235)","termid":"MONDO:0000235","xrefs":{"Monarch":{"xref_id":"0000235"}}}


id: FYPO:0004327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to sorbitol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to sorbitol","synonyms":[{"name":"normal protein phosphorylation during cellular response to sorbitol during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to sorbitol during vegetative growth","type":"exact"}],"termid":"FYPO:0004327"}


id: PBO:0024842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor GTPase Guf1 (predicted)","termid":"PBO:0024842"}


id: GO:0052422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a host organism effects a change in the enzyme activity of its symbiont organism.","definition_xrefs":["GOC:tb","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont catalytic activity (obsolete GO:0052422)","synonyms":[{"name":"modulation by host of symbiont enzyme activity","type":"exact"},{"name":"modulation by host of symbiont molecular function","type":"broad"}],"termid":"GO:0052422"}


id: FYECO:0000192
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Biotin was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin absent","termid":"FYECO:0000192"}


id: MOD:00487
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:115#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized proline biotinylated with biotin-LC-hydrazide","synonyms":[{"name":"OxProBiotin","type":"related"},{"name":"Oxidized Proline biotinylated with biotin-LC-hydrazide","type":"related"}],"termid":"MOD:00487"}


id: GO:0010144
data:
  {"annotated_genes":["SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113807],"is_not":false,"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, the active form of vitamin B6, from pyridoxamine.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal 5'-phosphate salvage","termid":"GO:0009443"},{"relation_name":"is_a","term_name":"pyridoxamine metabolic process","termid":"GO:0042818"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyridoxal phosphate biosynthetic process from pyridoxamine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal 5'-phosphate salvage from pyridoxamine","type":"exact"},{"name":"pyridoxal phosphate anabolism from pyridoxamine","type":"exact"},{"name":"pyridoxal phosphate formation from pyridoxamine","type":"exact"},{"name":"pyridoxal phosphate synthesis from pyridoxamine","type":"exact"},{"name":"vitamin B6 biosynthesis from pyridoxamine","type":"exact"},{"name":"vitamin B6 biosynthetic process from pyridoxamine","type":"exact"}],"termid":"GO:0010144","terms_by_termid":{"GO:0010144":null}}


id: FYPO:0008292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in the cell division site plasma membrane is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatidylinositol-4,5-bisphosphate level in plasma membrane","termid":"FYPO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased phosphatidylinositol-4,5-bisphosphate level in the cell division site plasma membrane","synonyms":[{"name":"increased cell sivision site plasma membrane PI(4,5)P2 level","type":"exact"}],"termid":"FYPO:0008292"}


id: PBO:0038298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_sequence","termid":"PBO:0038298"}


id: MONDO:0033362
data:
  {"annotated_genes":["SJAG_04545","SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88716,88717],"is_not":false,"summary":null,"term":"MONDO:0033362"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 53","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617389","UMLS:C4479313","GARD:16224","MEDGEN:1374886","DOID:0080464"],"synonyms":[{"name":"DEE53","type":"exact"},{"name":"EIEE53","type":"exact"},{"name":"developmental and epileptic encephalopathy 53","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 53","type":"exact"}],"termid":"MONDO:0033362","terms_by_termid":{"MONDO:0033362":null},"xrefs":{"Monarch":{"xref_id":"0033362"}}}


id: PBO:0072350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 36","termid":"PBO:0072350"}


id: MONDO:0007335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft lip with or without cleft palate mapped to chromosome 6p24.","definition_xrefs":["NCIT:C124838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 1","secondary_identifiers":["UMLS:C1861537","DOID:0080395","MESH:C566121","OMIM:119530","MEDGEN:349303"],"synonyms":[{"name":"OFC1","type":"exact"},{"name":"cleft Lip/palate, nonsyndromic","type":"related"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 1","type":"related"},{"name":"orofacial cleft 1","type":"exact"},{"name":"orofacial cleft, nonsyndromic","type":"related"},{"name":"orofacial cleft-1","type":"exact"}],"termid":"MONDO:0007335","xrefs":{"Monarch":{"xref_id":"0007335"}}}


id: GO:0003721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the extension of the 3' end of a DNA strand by one deoxynucleotide at a time. Cannot initiate a chain de novo; uses the RNA subunit of the telomerase enzyme complex as its template.","definition_xrefs":["PMID:11812242"],"gene_count":0,"genotype_count":0,"name":"obsolete telomerase RNA reverse transcriptase activity (obsolete GO:0003721)","synonyms":[{"name":"telomerase, catalyst","type":"exact"}],"termid":"GO:0003721"}


id: PBO:0043525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA6 antisense RNA 1","termid":"PBO:0043525"}


id: PBO:0074682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63D","termid":"PBO:0074682"}


id: PBO:0042947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 1","termid":"PBO:0042947"}


id: PBO:0048475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 2","termid":"PBO:0048475"}


id: PBO:0045732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EAF1 antisense RNA 1","termid":"PBO:0045732"}


id: PBO:0090108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase interacting protein involved in vesicle tethering at the Golgi","termid":"PBO:0090108"}


id: PBO:0081088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 18","termid":"PBO:0081088"}


id: MONDO:0018022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"beta-thalassemia and related diseases","termid":"MONDO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemoglobin Lepore-beta-thalassemia syndrome","secondary_identifiers":["GARD:21505","Orphanet:330032","UMLS:C5679855","MEDGEN:1826060"],"synonyms":[{"name":"HbLepore-beta-thalassemia syndrome","type":"exact"},{"name":"Lepore-beta-thalassemia syndrome","type":"exact"}],"termid":"MONDO:0018022","xrefs":{"Monarch":{"xref_id":"0018022"}}}


id: PBO:0083660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) localized integral membrane protein; may promote secretion of certain hexose transporters, including Gal2p; involved in glucose-dependent repression","termid":"PBO:0083660"}


id: GO:0016358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.","definition_xrefs":["GOC:aruk","GOC:jl","ISBN:0198506732","PMID:22683681","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite development","termid":"GO:0016358"}


id: MONDO:0006361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete penile fibromatosis (obsolete MONDO:0006361)","secondary_identifiers":["EFO:1000466"],"termid":"MONDO:0006361","xrefs":{"Monarch":{"xref_id":"0006361"}}}


id: FYPO:0004585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of linear elements is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal linear element morphology","termid":"FYPO:0004585"}


id: PBO:0085971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; predicted metabolic role based on network analysis derived from ChIP experiments, a large-scale deletion study and localization of transcription factor binding sites; null mutant is sensitive to temperature oscillation in a cdc13-1 mutant","termid":"PBO:0085971"}


id: GO:0031112
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microtubule polymerization or depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule polymerization or depolymerization","termid":"GO:0031110"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"positively_regulates","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"positive regulation of microtubule polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of microtubule polymerization or depolymerization","type":"narrow"},{"name":"stimulation of microtubule polymerization or depolymerization","type":"narrow"},{"name":"up regulation of microtubule polymerization or depolymerization","type":"exact"},{"name":"up-regulation of microtubule polymerization or depolymerization","type":"exact"},{"name":"upregulation of microtubule polymerization or depolymerization","type":"exact"}],"termid":"GO:0031112","terms_by_termid":{"GO:0031117":null}}


id: PBO:0056271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1A member 2","termid":"PBO:0056271"}


id: PBO:0057465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR583 host gene","termid":"PBO:0057465"}


id: GO:0034581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-methyloct-2-enoyl-CoA + H2O = 3-hydroxy-4-methyloctanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-methyloct-2-enoyl-CoA hydratase activity (obsolete GO:0034581)","termid":"GO:0034581"}


id: MONDO:0013886
data:
  {"annotated_genes":["SJAG_02196"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88004],"is_not":false,"summary":null,"term":"MONDO:0013886"}]},"cv_name":"mondo","definition":"Non-progressive cerebellar ataxia with intellectual deficit is a rare subtype of autosomal dominant cerebellar ataxia type 1 (ADCA type 1) characterized by the onset in infancy of cerebellar ataxia, neonatal hypotonia (in some), mild developmental delay and, in later life, intellectual disability. Less common features include dysarthria, dysmetria and dysmorphic facial features (long face, bulbous nose long philtrum, thick lower lip and pointed chin).","definition_xrefs":["Orphanet:314647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"cerebellar dysfunction with variable cognitive and behavioral abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17429","DOID:0050998","MEDGEN:766575","SCTID:723441001","UMLS:C3553661","OMIM:614756"],"synonyms":[{"name":"CAMTA1-related disorder","type":"exact"},{"name":"CANPMR","type":"exact"},{"name":"cerebellar ataxia, nonprogressive, with intellectual disability","type":"exact"},{"name":"cerebellar ataxia, nonprogressive, with mental retardation","type":"exact"},{"name":"cerebellar dysfunction with variable cognitive and behavioral abnormalities","type":"exact"},{"name":"non-progressive cerebellar ataxia with intellectual disability","type":"exact"},{"name":"nonprogressive cerebellar ataxia with intellectual disability","type":"exact"},{"name":"nonprogressive cerebellar ataxia with mental retardation","type":"exact"}],"termid":"MONDO:0013886","terms_by_termid":{"MONDO:0013886":null},"xrefs":{"Monarch":{"xref_id":"0013886"}}}


id: PR:O94282
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytoplasmic tRNA 2-thiolation protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03335","PANTHER:PTHR11807:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tRNA 2-thiolation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.03","secondary_identifiers":["UniProtKB:O94282"],"synonyms":[{"name":"Spom972h-CTU1","type":"exact"},{"name":"cytoplasmic tRNA adenylyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94282"}


id: MONDO:1012158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, cattle","secondary_identifiers":["OMIA:000631-9913"],"termid":"MONDO:1012158","xrefs":{"Monarch":{"xref_id":"1012158"}}}


id: GO:0110121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a gamma-tubulin complex is transported to, or maintained in, a specific location at the cytoplasmic side of the mitotic spindle pole body.","definition_xrefs":["GOC:vw","PMID:19001497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex localization to mitotic spindle pole body","termid":"GO:1990735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"gamma-tubulin complex localization to cytoplasmic side of mitotic spindle pole body","termid":"GO:0110121"}


id: PBO:0077121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMMDC1 divergent transcript","termid":"PBO:0077121"}


id: PBO:0044794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 7, pseudogene","termid":"PBO:0044794"}


id: PBO:0029644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_cell_with_fragmented_nucleus_and_increased_septum_thickness","termid":"PBO:0029644"}


id: PBO:0004150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair nuclease Rad13","termid":"PBO:0004150"}


id: FYPO:0000825
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121469,121471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[121472,121470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[121457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"increased RNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"secondary_identifiers":["FYPO:0001247","FYPO:0002936","FYPO:0000910"],"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation during vegetative growth","type":"related"},{"name":"RNA accumulation: increased during vegetative growth","type":"related"},{"name":"increased RNA accumulation during vegetative growth","type":"related"},{"name":"increased RNA level during mitotic cell cycle","type":"related"},{"name":"increased cellular RNA level during vegetative growth","type":"exact"},{"name":"increased cellular mRNA level during vegetative growth","type":"narrow"},{"name":"increased mRNA accumulation during vegetative growth","type":"related"},{"name":"increased mRNA level during mitotic cell cycle","type":"related"},{"name":"increased mRNA level during vegetative growth","type":"narrow"},{"name":"increased mRNA transcript level during vegetative growth","type":"narrow"},{"name":"increased messenger RNA level during vegetative growth","type":"narrow"},{"name":"increased transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0000825","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null,"FYPO:0004982":null}}


id: FYPO:0003076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type). Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["GO:0031952","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein autophosphorylation during vegetative growth","synonyms":[{"name":"normal protein autophosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003076"}


id: PBO:0036275
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42 diffuses laterally within the plasma membrane, faster at cell sides than at cell tips, and the GDP-bound form diffuses faster than the GTP-bound form","termid":"PBO:0036275"}


id: MONDO:0020180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete palpebral piliary tumor (obsolete MONDO:0020180)","secondary_identifiers":["Orphanet:98590"],"termid":"MONDO:0020180","xrefs":{"Monarch":{"xref_id":"0020180"}}}


id: PBO:0013048
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA Break Localizing","termid":"PBO:0013048"}


id: MONDO:0009462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine phosphorylase deficiency, immune defect due to","secondary_identifiers":["UMLS:C1855737","MEDGEN:344562","MESH:C565465","OMIM:243080"],"synonyms":[{"name":"inosine phosphorylase deficiency, immune defect due to","type":"exact"}],"termid":"MONDO:0009462","xrefs":{"Monarch":{"xref_id":"0009462"}}}


id: PBO:0078929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-1","termid":"PBO:0078929"}


id: PBO:0059424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRS2 pseudogene 1","termid":"PBO:0059424"}


id: PBO:0001258
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Prr1","termid":"PBO:0001258"}


id: PBO:0039639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 2, pseudogene","termid":"PBO:0039639"}


id: PBO:0081776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705D","termid":"PBO:0081776"}


id: PBO:0065761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridine nucleotide-disulphide oxidoreductase domain 1","termid":"PBO:0065761"}


id: PBO:0080536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH and IL9R antisense RNA 1","termid":"PBO:0080536"}


id: GO:0005856
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id: PBO:0051816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 1 binding protein 1","termid":"PBO:0051816"}


id: PBO:0039881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 40","termid":"PBO:0039881"}


id: PBO:0109117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 16, RNA N6-adenosine","termid":"PBO:0109117"}


id: MONDO:1010686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"},{"relation_name":"is_a","term_name":"cardiomyopathy, dog","termid":"MONDO:1010441"},{"relation_name":"is_a","term_name":"amyloidosis, dog","termid":"MONDO:1011467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, dog","secondary_identifiers":["OMIA:000038-9615"],"termid":"MONDO:1010686","xrefs":{"Monarch":{"xref_id":"1010686"}}}


id: PBO:0045323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 3","termid":"PBO:0045323"}


id: PBO:0065066
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 4","termid":"PBO:0065066"}


id: PBO:0046444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin 3","termid":"PBO:0046444"}


id: FYPO:0007427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of the old spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the nucleus. The old SPB may be transiently inserted into the nuclear envelope but does not remain in place as normal.","definition_xrefs":["PMID:19487457","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","termid":"FYPO:0003568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal old mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","synonyms":[{"name":"abnormal establishment of old mitotic spindle pole body localization to nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal old mitotic SPB insertion into nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal old mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal old mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0007427"}


id: MONDO:0015313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bilateral choanal atresia is a congenital anomaly that is usually sporadic (but some familial cases have been reported), is more commonly seen in females than in males (2:1), and where the nose is blocked on both sides by bony or soft tissue formed during embryological development. It is characterized by respiratory distress relieved by crying and rhinorrhea that presents at birth.","definition_xrefs":["Orphanet:137920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia","termid":"MONDO:0012155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, bilateral","secondary_identifiers":["MEDGEN:870857","GARD:19890","icd11.foundation:1138913171","UMLS:C4025317"],"termid":"MONDO:0015313","xrefs":{"Monarch":{"xref_id":"0015313"}}}


id: GO:1902063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of betaine aldehyde.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:23563483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"betaine aldehyde metabolic process","termid":"GO:1902061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"betaine aldehyde biosynthetic process","synonyms":[{"name":"betaine aldehyde anabolism","type":"exact"},{"name":"betaine aldehyde biosynthesis","type":"exact"},{"name":"betaine aldehyde formation","type":"exact"},{"name":"betaine aldehyde synthesis","type":"exact"}],"termid":"GO:1902063"}


id: GO:0072184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the renal vesicle progenitor cells of the kidney as it progresses from its formation to the mature state. A renal vesicle progenitor cell is a cell that will give rise to terminally differentiated cells of the renal vesicle without self-renewing.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"renal vesicle development","termid":"GO:0072087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal vesicle progenitor cell differentiation","termid":"GO:0072184"}


id: PBO:0087068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L33B; rpl33b null mutant exhibits normal growth while rpl33a rpl33b double null mutant is inviable; homologous to mammalian ribosomal protein L35A, no bacterial homolog; RPL33B has a paralog, RPL33A, that arose from the whole genome duplication","termid":"PBO:0087068"}


id: MONDO:0019679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly type A7 (Smorgasbord type) is a form of brachydactyly that presents with the characteristic features of brachydactyly type A2 (shortening of the middle phalanges of the index finger and, sometimes, of the little finger) and type D (shortening of the distal phalanx of the thumb) plus various additional features.","definition_xrefs":["Orphanet:93397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A7","secondary_identifiers":["UMLS:C4303991","GARD:984","icd11.foundation:1487696553","MEDGEN:929660","SCTID:720571006"],"synonyms":[{"name":"brachydactyly Smorgasbord type","type":"related"},{"name":"brachydactyly, Smorgasbord type","type":"exact"}],"termid":"MONDO:0019679","xrefs":{"Monarch":{"xref_id":"0019679"}}}


id: FYPO:0005876
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize tyrosine, and therefore requires tyrosine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for tyrosine","synonyms":[{"name":"growth auxotrophic for tyrosine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for tyrosine during vegetative growth","type":"exact"},{"name":"tyrosine auxotrophy","type":"exact"}],"termid":"FYPO:0005876"}


id: SO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (or regions) that includes all of the sequence elements necessary to encode a functional transcript. A gene may include regulatory regions, transcribed regions and/or other functional sequence regions.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"member_of","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Gene"],"synonyms":[{"name":"INSDC_feature:gene","type":"exact"}],"termid":"SO:0000704"}


id: MOD:01972
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl coenzyme A thioester.","definition_xrefs":["PubMed:7915164","RESID:AA0614","PubMed:20977214","PubMed:16253988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl coenzyme A thioester","synonyms":[{"name":"(2S)-2-amino-5-(2-[([3-([(2R)-2-hydroxy-3,3-dimethyl-4-([3'-phospho-adenosyl-5'-diphosphoryl]-oxy)-butanoyl]-amino)-propanoyl]-amino)-ethyl]-sulfanyl)-5-oxopentanoic acid","type":"exact"},{"name":"(2S)-2-amino-5-([2-(3-[(2R)-2-hydroxy-3,3-dimethyl-4-([3'-phospho-adenosyl-5'-diphosphoryl]-oxy)-butanamido]-propanamido)-ethyl]-sulfanyl)-5-oxopentanoic acid","type":"exact"},{"name":"5-glutamyl 4-[(3'-phospho-adenosyl-5'-diphosphoryl)oxy]pantetheine thioester","type":"exact"},{"name":"5-glutamyl coenzyme A thioester","type":"exact"},{"name":"5-glutamyl coenzyme A thioester intermediate","type":"exact"}],"termid":"MOD:01972"}


id: SO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant extending the CDS, that causes elongation of the resulting polypeptide sequence.","definition_xrefs":["PMID:32020195","PMID:14732127","PMID:15864293","PMID:27984720","PMID:31216041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_extension","synonyms":[{"name":"CDS Extension","type":"exact"},{"name":"elongated CDS","type":"exact"},{"name":"elongated_CDS","type":"exact"}],"termid":"SO:0002227"}


id: PBO:0053495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 473","termid":"PBO:0053495"}


id: PBO:0081320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 106","termid":"PBO:0081320"}


id: FYECO:0000349
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which clomifene was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ clomifene","synonyms":[{"name":"+ clomiphene","type":"exact"}],"termid":"FYECO:0000349"}


id: MONDO:0035940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-lymphoblastic leukemia/lymphoma with recurrent genetic abnormality","termid":"MONDO:0035605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with t(9;22)(q34.1;q11.2)","secondary_identifiers":["GARD:22342","DOID:0080643","MEDGEN:1842992","Orphanet:585909","icd11.foundation:381281608","NCIT:C80331","UMLS:C5680319"],"synonyms":[{"name":"B-ALL with t(9;22)(q34.1;q11.2)","type":"exact"},{"name":"BCR-ABL1-like B-ALL","type":"exact"},{"name":"Philadelphia chromosome-like B-ALL","type":"exact"}],"termid":"MONDO:0035940","xrefs":{"Monarch":{"xref_id":"0035940"}}}


id: PBO:0043896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1 pseudogene 3","termid":"PBO:0043896"}


id: PBO:0064607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 4 homeobox 1","termid":"PBO:0064607"}


id: PBO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ctf18 RFC-like complex subunit Dcc1","termid":"PBO:0000348"}


id: PBO:0004155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Chr1 (predicted)","termid":"PBO:0004155"}


id: PBO:0062957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPC1L2B antisense RNA 1 (head to head)","termid":"PBO:0062957"}


id: GO:0140107
data:
  {"annotated_genes":["SJAG_01353","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72425,73993],"is_not":false,"summary":null,"term":"GO:0140107"}]},"cv_name":"molecular_function","definition":"Enables the transfer of potassium ions from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:10629185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity potassium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0140107","terms_by_termid":{"GO:0140107":null}}


id: PBO:0005155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein Bis1","termid":"PBO:0005155"}


id: FYPO:0000316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore germinates but fails to produce dividing cells that can survive under normal conditions.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination","synonyms":[{"name":"inviable germinated spore","type":"exact"},{"name":"inviable germinating spore","type":"related"},{"name":"lethal after spore germination","type":"exact"}],"termid":"FYPO:0000316"}


id: GO:0097749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A membrane organization process resulting in the formation of a tubular projection. This may face inwardly (as in tubular membrane invaginations) or outwardly (as in endosomal tubules).","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane tubulation","termid":"GO:0097749"}


id: PBO:0029818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_without_cell_division_(obsolete_FYPO:0002419)","termid":"PBO:0029818"}


id: PBO:0047090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member B","termid":"PBO:0047090"}


id: PBO:0042670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 4","termid":"PBO:0042670"}


id: PBO:0079962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 9 Y-linked","termid":"PBO:0079962"}


id: GO:0030704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the vitelline membrane portion of the egg shell, a rigid structure required to maintain the shape of the egg.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"egg coat formation","termid":"GO:0035803"},{"relation_name":"is_a","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"vitelline membrane formation","termid":"GO:0030704"}


id: MONDO:0033566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 48","secondary_identifiers":["DOID:0112112","MEDGEN:1732052","OMIM:619012","UMLS:C5436602"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 48","type":"related"},{"name":"COXPD48","type":"related"}],"termid":"MONDO:0033566","xrefs":{"Monarch":{"xref_id":"0033566"}}}


id: GO:0016324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the plasma membrane located at the apical end of the cell.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"apical plasma membrane","termid":"GO:0016324"}


id: PBO:0085706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in septin-ER tethering; interacts with ER membrane protein, Scs2p, and Shs1p, a septin ring component, at bud neck to create ER diffusion barrier; GFP-fusion protein localizes to the cell periphery, cytoplasm, bud, and bud neck; interacts with Crm1p in two-hybrid assay; YMR124W has a paralog, YLR031W, that arose from the whole genome duplication","termid":"PBO:0085706"}


id: PBO:0065487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 6","termid":"PBO:0065487"}


id: MONDO:1012396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reactive perforating collagenosis, non-human animal","termid":"MONDO:1011754"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive perforating collagenosis, domestic cat","secondary_identifiers":["OMIA:001476-9685"],"termid":"MONDO:1012396","xrefs":{"Monarch":{"xref_id":"1012396"}}}


id: GO:0032017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Ran protein signal transduction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Ran protein signal transduction (obsolete GO:0032017)","synonyms":[{"name":"activation of Ran protein signal transduction","type":"narrow"},{"name":"stimulation of Ran protein signal transduction","type":"narrow"},{"name":"up regulation of Ran protein signal transduction","type":"exact"},{"name":"up-regulation of Ran protein signal transduction","type":"exact"},{"name":"upregulation of Ran protein signal transduction","type":"exact"}],"termid":"GO:0032017"}


id: PBO:0089127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14","termid":"PBO:0089127"}


id: PBO:0054660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2066","termid":"PBO:0054660"}


id: GO:0075272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of zygosporangium development","termid":"GO:0075272"}


id: PBO:0111872
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein","termid":"PBO:0111872"}


id: PBO:0052297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH RNA binding domain containing, signal transduction associated 2","termid":"PBO:0052297"}


id: GO:0032906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of transforming growth factor-beta2 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta production","termid":"GO:0071604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transforming growth factor beta2 production","synonyms":[{"name":"TGFB2 production","type":"exact"},{"name":"transforming growth factor-beta2 production","type":"exact"},{"name":"TGF-B2 production","type":"exact"}],"termid":"GO:0032906"}


id: PBO:0083468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NOP58","termid":"PBO:0083468"}


id: PBO:0066765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 63","termid":"PBO:0066765"}


id: GO:0035798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n-alkanal + NADP+ = alk-2-enal + NADPH + H+.","definition_xrefs":["RHEA:13737","PMID:16299173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-alkenal reductase [NAD(P)H] activity","termid":"GO:0032440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-alkenal reductase (NADPH) activity","secondary_identifiers":["EC:1.3.1.102"],"synonyms":[{"name":"NADPH:2-alkenal alpha,beta-hydrogenase activity","type":"exact"}],"termid":"GO:0035798"}


id: PBO:0045124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMTF1 antisense RNA 1","termid":"PBO:0045124"}


id: PBO:0064531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit H","termid":"PBO:0064531"}


id: GO:0044789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a host organism modulates the frequency, rate or extent of the release of a virus with which it is infected, from its cells.","definition_xrefs":["GOC:jl","PMID:18305167"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of viral release from host cell (obsolete GO:0044789)","termid":"GO:0044789"}


id: PBO:0080294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 58 pseudogene","termid":"PBO:0080294"}


id: GO:0051911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2 + 2-(2,3-dihydropentaprenyloxy)phenazine = 2-dihydropentaprenyloxyphenazine.","definition_xrefs":["EC:1.12.98.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","termid":"GO:0046995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"Methanosarcina-phenazine hydrogenase activity","secondary_identifiers":["MetaCyc:RXN-7733","RHEA:24436"],"synonyms":[{"name":"coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide hydrogenase activity","type":"related"},{"name":"hydrogen:2-(2,3-dihydropentaprenyloxy)phenazine oxidoreductase activity","type":"related"},{"name":"methanophenazine hydrogenase activity","type":"exact"},{"name":"methylviologen-reducing hydrogenase activity","type":"exact"}],"termid":"GO:0051911"}


id: GO:0045770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asymmetric cell division","termid":"GO:0009786"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"positively_regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asymmetric cell division","synonyms":[{"name":"activation of asymmetric cell division","type":"narrow"},{"name":"stimulation of asymmetric cell division","type":"narrow"},{"name":"up regulation of asymmetric cell division","type":"exact"},{"name":"up-regulation of asymmetric cell division","type":"exact"},{"name":"upregulation of asymmetric cell division","type":"exact"}],"termid":"GO:0045770"}


id: GO:0008358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the anterior/posterior axis of the embryo by gradients of maternally-transcribed gene products; exemplified in insects by the morphogens, bicoid and nanos.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior axis specification, embryo","termid":"GO:0008595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal determination of anterior/posterior axis, embryo","termid":"GO:0008358"}


id: GO:0016847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) = 1-aminocyclopropane-1-carboxylate + S-methyl-5'-thioadenosine + H+.","definition_xrefs":["RHEA:21744","EC:4.4.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate synthase activity","secondary_identifiers":["KEGG_REACTION:R00179","GO:0034100","MetaCyc:4.4.1.14-RXN"],"synonyms":[{"name":"1-aminocyclopropane-1-carboxylate synthetase activity","type":"related"},{"name":"1-aminocyclopropane-1-carboxylic acid synthase activity","type":"related"},{"name":"1-aminocyclopropanecarboxylate synthase activity","type":"related"},{"name":"ACC synthase activity","type":"related"},{"name":"L-VG deaminase activity","type":"related"},{"name":"L-vinylglycine deaminase activity","type":"related"},{"name":"S-adenosyl-L-methionine methylthioadenosine-lyase (1-aminocyclopropane-1-carboxylate-forming)","type":"related"},{"name":"S-adenosyl-L-methionine methylthioadenosine-lyase activity","type":"related"},{"name":"aminocyclopropanecarboxylate synthase activity","type":"related"},{"name":"aminocyclopropanecarboxylic acid synthase activity","type":"related"}],"termid":"GO:0016847"}


id: GO:0043398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Helix Loop Helix domain, a domain of 40-50 residues that occurs in specific DNA-binding proteins that act as transcription factors. The domain is formed of two amphipathic helices joined by a variable length linker region that can form a loop and it mediates protein dimerization.","definition_xrefs":["Prosite:PDOC0038","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"HLH domain binding","termid":"GO:0043398"}


id: GO:0030285
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of synaptic vesicle membrane (obsolete GO:0030285)","synonyms":[{"name":"integral to synaptic vesicle membrane","type":"narrow"}],"termid":"GO:0030285"}


id: GO:0072360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the vascular cord over time from its initial formation until its mature state. The vascular cord is the primordial vasculature that will develop into blood vessels by the process of tubulogenesis.","definition_xrefs":["PMID:7084422","GOC:mah","ZFA:0005077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"circulatory system development","termid":"GO:0072359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular cord development","termid":"GO:0072360"}


id: FYPO:0008158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 is increased at the silent mating-type locus.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-S10 phosphorylation during vegetative growth","termid":"FYPO:0004080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-S10 phosphorylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008158"}


id: MONDO:0010501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macrocephaly-intellectual disability-left ventricular non compaction syndrome is a rare, genetic, syndromic intellectual disability characterized by motor and cognitive developmental delay with language impairment, macrocephaly, hypotonia, dysmorphic facial features (including long face, slanting palpebral fissures and prominent, flattened nose) and left ventricular noncompaction cardiomyopathy. Patients also present skeletal abnormalities (e.g. scoliosis, finger clinodactyly, pes planus), slender build and shy behavior. Strabismus and various neurological signs (including ataxia, tremor and hyperreflexia) may be associated, as well as epilepsy, autism and MRI findings showing a small cerebellum and abnormalities of the corpus callosum. A phenotypic variant with no cardiac involvement has been reported.","definition_xrefs":["Orphanet:466791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability 34","secondary_identifiers":["OMIM:300967","DOID:0060817","UMLS:C4225417","MEDGEN:902184","GARD:17832"],"synonyms":[{"name":"MRXS34","type":"exact"},{"name":"MRXSML","type":"exact"},{"name":"NONO X-linked syndromic intellectual disability","type":"exact"},{"name":"X-linked syndromic intellectual disability caused by mutation in NONO","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic 34","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 34","type":"exact"},{"name":"intellectual disability, X-linked, syndromic type 34","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Mircsof-Langouet type","type":"related"},{"name":"macrocephaly-intellectual disability-left ventricular non compaction syndrome","type":"exact"},{"name":"mental retardation, X-linked, syndromic 34","type":"exact"},{"name":"mental retardation, X-linked, syndromic type 34","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Mircsof-Langouet type","type":"related"},{"name":"syndromic X-linked intellectual disability Mircsof-Langouet type","type":"exact"},{"name":"syndromic X-linked intellectual disability type 34","type":"exact"},{"name":"syndromic X-linked mental retardation Mircsof-Langouet type","type":"exact"}],"termid":"MONDO:0010501","xrefs":{"Monarch":{"xref_id":"0010501"}}}


id: GO:0071079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha2-beta1 integrin complex bound to the cartilage matrix protein chondroadherin.","definition_xrefs":["PMID:9281592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha2-beta1 integrin-chondroadherin complex","synonyms":[{"name":"ITGA2-ITGB1-CHAD complex","type":"narrow"}],"termid":"GO:0071079"}


id: MONDO:0004635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the postcricoid region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypopharynx cancer","termid":"MONDO:0005806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"postcricoid region cancer","secondary_identifiers":["SCTID:363400004","DOID:8660","UMLS:C0496769","ICD9:148.0","MEDGEN:141673","NCIT:C9323"],"synonyms":[{"name":"malignant neoplasm of postcricoid area","type":"exact"},{"name":"malignant neoplasm of the postcricoid area","type":"exact"},{"name":"malignant postcricoid neoplasm","type":"exact"},{"name":"malignant postcricoid tumor","type":"exact"},{"name":"malignant postcricoid tumour","type":"exact"},{"name":"malignant tumor of pharyngoesophageal junction","type":"exact"},{"name":"malignant tumor of postcricoid area","type":"exact"},{"name":"malignant tumor of the postcricoid area","type":"exact"},{"name":"malignant tumour of pharyngoesophageal junction","type":"exact"},{"name":"malignant tumour of postcricoid area","type":"exact"},{"name":"malignant tumour of the postcricoid area","type":"exact"}],"termid":"MONDO:0004635","xrefs":{"Monarch":{"xref_id":"0004635"}}}


id: PBO:0017462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part_that_occurs_in","termid":"PBO:0017462"}


id: FYPO:0005774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of magnesium ions measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular magnesium level","synonyms":[{"name":"decreased cellular magnesium ion level","type":"exact"},{"name":"decreased cellular magnesium level during mitotic cell cycle","type":"related"},{"name":"decreased cellular magnesium level during vegetative growth","type":"exact"},{"name":"decreased magnesium accumulation","type":"related"},{"name":"reduced cellular magnesium level","type":"exact"}],"termid":"FYPO:0005774"}


id: PBO:0041030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain PHD finger transcription factor pseudogene 1","termid":"PBO:0041030"}


id: GO:0019487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetylene, a colorless, volatile, explosive gas, that occur in the absence of oxygen.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylene metabolic process","termid":"GO:0018864"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"alkyne catabolic process","termid":"GO:0043454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic acetylene catabolic process","secondary_identifiers":["MetaCyc:P161-PWY"],"synonyms":[{"name":"anaerobic acetylene breakdown","type":"exact"},{"name":"anaerobic acetylene catabolism","type":"exact"},{"name":"anaerobic acetylene degradation","type":"exact"},{"name":"anaerobic ethyne catabolic process","type":"exact"},{"name":"anaerobic ethyne catabolism","type":"exact"}],"termid":"GO:0019487"}


id: MOD:02065
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-alanine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-alanine residue","termid":"MOD:02065"}


id: MONDO:0030261
data:
  {"annotated_genes":["SJAG_01818"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88343],"is_not":false,"summary":null,"term":"MONDO:0030261"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 1F","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619304","GARD:16442","DOID:0112331","MEDGEN:1785905","UMLS:C5543331"],"synonyms":[{"name":"PCH1F","type":"exact"},{"name":"pontocerebellar hypoplasia, type 1F","type":"exact"}],"termid":"MONDO:0030261","terms_by_termid":{"MONDO:0030261":null},"xrefs":{"Monarch":{"xref_id":"0030261"}}}


id: GO:0008432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"JUN kinase binding","synonyms":[{"name":"JNK binding","type":"exact"}],"termid":"GO:0008432"}


id: PBO:0044546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein 3","termid":"PBO:0044546"}


id: PBO:0047567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 18","termid":"PBO:0047567"}


id: PBO:0060376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb related transcription factor, partner of profilin","termid":"PBO:0060376"}


id: PBO:0044072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSTB pseudogene 1","termid":"PBO:0044072"}


id: SO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytologically observable heterochromatic regions of chromosomes away from centromeres that contain predominatly large tandem repeats and retrotransposons.","definition_xrefs":["PMID:6439888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"knob","synonyms":[{"name":"Heterochromatin Knob","type":"exact"}],"termid":"SO:0002257"}


id: PBO:0046782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA2 antisense RNA 1","termid":"PBO:0046782"}


id: PBO:0086081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose from dolichyl phosphate-D-mannose to protein serine/threonine residues of secretory proteins; reaction is essential for cell wall rigidity; member of a family of mannosyltransferases","termid":"PBO:0086081"}


id: GO:0019182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a chloride ion through a transmembrane channel that opens when bound to histamine.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"histamine-gated chloride channel activity","termid":"GO:0019182"}


id: PBO:0002667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial ring protein Mid2","termid":"PBO:0002667"}


id: GO:0018574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dichlorohydroquinone + O2 + H2O = HCl + 2 H+ + 2-chloromaleylacetate.","definition_xrefs":["UM-BBD_enzymeID:e0422"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dichloro-p-hydroquinone 1,2-dioxygenase activity (obsolete GO:0018574)","termid":"GO:0018574"}


id: MONDO:1010768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitiligo that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitiligo, non-human animal","termid":"MONDO:1010136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo, cattle","secondary_identifiers":["OMIA:001055-9913"],"termid":"MONDO:1010768","xrefs":{"Monarch":{"xref_id":"1010768"}}}


id: PBO:0075694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRD5A3 antisense RNA 1","termid":"PBO:0075694"}


id: GO:0051117
data:
  {"annotated_genes":["SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75860],"is_not":false,"summary":null,"term":"GO:0051117"}]},"cv_name":"molecular_function","definition":"Binding to an ATPase, any enzyme that catalyzes the hydrolysis of ATP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"ATPase binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0051117","terms_by_termid":{"GO:0051117":null}}


id: FYPO:0000861
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121467,121468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[121460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"normal histone methylation during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal histone methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000861","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PR:Q9P7I8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.18 gene.","definition_xrefs":["UniProtKB:Q9P7I8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0390 protein C24B10.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.18","synonyms":[{"name":"Spom972h-SPCC24B10.18","type":"exact"}],"termid":"PR:Q9P7I8"}


id: MONDO:1012683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any X-linked chondrodysplasia characterized by spondylosis and arthrosis that occurs in dogs.","definition_xrefs":["PMID:17212747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, dog","termid":"MONDO:1011194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylo-epiphyseal dysplasia tarda, X-linked, dog","secondary_identifiers":["OMIA:001448-9615"],"synonyms":[{"name":"spondyloepiphyseal dysplasia, congenital type, dog","type":"related"}],"termid":"MONDO:1012683","xrefs":{"Monarch":{"xref_id":"1012683"}}}


id: PBO:0078504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tribbles pseudokinase 1","termid":"PBO:0078504"}


id: PBO:0063397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 7","termid":"PBO:0063397"}


id: PBO:0030233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus","termid":"PBO:0030233"}


id: GO:0072149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular visceral epithelial cell. A glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"podocyte differentiation","termid":"GO:0072112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte cell fate commitment","synonyms":[{"name":"glomerular visceral epithelial cell fate commitment","type":"exact"}],"termid":"GO:0072149"}


id: PBO:0089687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 1","termid":"PBO:0089687"}


id: GO:0001029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way. Once recruited to an RNA polymerase III type 3 promoter by SNAP-type and TFIIIC-type factors, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["PMID:12381659","GOC:txnOH-2018"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III type 3 promoter TFIIIB-type transcription factor activity (obsolete GO:0001029)","synonyms":[{"name":"RNA polymerase III type 3 promoter polymerase recruiting transcription factor activity","type":"related"}],"termid":"GO:0001029"}


id: PBO:0068539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 142, pseudogene","termid":"PBO:0068539"}


id: GO:0019119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene-9,10-oxide + H2O = trans-9,10-dihydrodiolphenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0496","UM-BBD_reactionID:r0560","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene-epoxide hydrolase activity","termid":"GO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenanthrene-9,10-epoxide hydrolase activity","termid":"GO:0019119"}


id: GO:0046021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter during mitotic cell cycle (obsolete GO:0046021)","synonyms":[{"name":"mitotic regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of transcription from Pol II promoter, mitotic","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"}],"termid":"GO:0046021"}


id: PBO:0111792
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase","termid":"PBO:0111792"}


id: GO:0010432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bract over time, from its formation to the mature structure. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence.","definition_xrefs":["GOC:tb","PO:0009055","PMID:16554366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bract development","termid":"GO:0010432"}


id: SO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence directly repeated at both ends of a defined sequence, of the sort typically found in retroviruses.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long_terminal_repeat","secondary_identifiers":["http://en.wikipedia.org/wiki/Long_terminal_repeat"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:long_terminal_repeat","type":"exact"},{"name":"LTR","type":"exact"},{"name":"direct terminal repeat","type":"related"},{"name":"long terminal repeat","type":"exact"}],"termid":"SO:0000286"}


id: MONDO:0019607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unspecified juvenile idiopathic arthritis is a rare, pediatric, rheumatologic disease, a subtype of juvenile idiopathic arthritis (JIA) characterized by arthritis of an unknown cause that persists for at least 6 weeks, and does not fulfill the criteria for any of the other JIA subtypes, or fulfills criteria for more than one of the other subtypes.","definition_xrefs":["Orphanet:91140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile idiopathic arthritis","termid":"MONDO:0011429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unspecified juvenile idiopathic arthritis","secondary_identifiers":["NANDO:2201061","EFO:0009734","GARD:19155","MEDGEN:1842681","UMLS:C5680196"],"synonyms":[{"name":"unspecified JIA","type":"exact"}],"termid":"MONDO:0019607","xrefs":{"Monarch":{"xref_id":"0019607"}}}


id: PBO:0031710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitophagy","termid":"PBO:0031710"}


id: PBO:0065003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM8 antisense RNA 1","termid":"PBO:0065003"}


id: PBO:0069539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 809, pseudogene","termid":"PBO:0069539"}


id: MONDO:0056798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the vermiform appendix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"disorder of appendix","secondary_identifiers":["DOID:60000","ICD10CM:K35-K38","MEDGEN:540821","ICD9:543.9","UMLS:C0267613","EFO:0009542","SCTID:18526009"],"synonyms":[{"name":"appendiceal disease","type":"exact"},{"name":"appendix disease","type":"exact"},{"name":"disease of appendix","type":"exact"},{"name":"disease of vermiform appendix","type":"exact"},{"name":"disease or disorder of vermiform appendix","type":"exact"},{"name":"disorder of appendix","type":"exact"},{"name":"disorder of vermiform appendix","type":"exact"},{"name":"vermiform appendix disease","type":"exact"},{"name":"vermiform appendix disease or disorder","type":"exact"}],"termid":"MONDO:0056798","xrefs":{"Monarch":{"xref_id":"0056798"}}}


id: GO:0106397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of R7 cell fate commitment.","definition_xrefs":["PMID:22878552","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate commitment","termid":"GO:0010455"},{"relation_name":"is_a","term_name":"regulation of R7 cell fate commitment","termid":"GO:0106396"},{"relation_name":"positively_regulates","term_name":"R7 cell fate commitment","termid":"GO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of R7 cell fate commitment","termid":"GO:0106397"}


id: PBO:0052145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNIP1 overlapping transcript 1","termid":"PBO:0052145"}


id: GO:0009693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene metabolic process","termid":"GO:0009692"},{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene biosynthetic process","secondary_identifiers":["GO:0042456","MetaCyc:ETHYL-PWY"],"synonyms":[{"name":"ethene biosynthesis","type":"exact"},{"name":"ethene biosynthesis from L-methionine","type":"exact"},{"name":"ethene biosynthetic process","type":"exact"},{"name":"ethene biosynthetic process from L-methionine","type":"exact"},{"name":"ethylene anabolism","type":"exact"},{"name":"ethylene biosynthesis","type":"exact"},{"name":"ethylene biosynthesis from L-methionine","type":"exact"},{"name":"ethylene biosynthetic process from L-methionine","type":"exact"},{"name":"ethylene formation","type":"exact"},{"name":"ethylene synthesis","type":"exact"}],"termid":"GO:0009693"}


id: GO:0008465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-glycerate + NAD+ = 3-hydroxypyruvate + NADH + H+.","definition_xrefs":["EC:1.1.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxypyruvate reductase [NAD(P)H] activity","termid":"GO:0016618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxypyruvate reductase (NADH) activity","secondary_identifiers":["MetaCyc:GLYCERATE-DEHYDROGENASE-RXN","RHEA:17905"],"synonyms":[{"name":"glycerate dehydrogenase (NAD+) activity","type":"exact"},{"name":"glycerate dehydrogenase activity","type":"broad"},{"name":"hydroxypyruvate dehydrogenase activity","type":"broad"}],"termid":"GO:0008465"}


id: MONDO:0019921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paternal uniparental disomy of chromosome 6 is an uniparental disomy of paternal origin characterized by intrauterine growth retardation, transient neonatal diabetes mellitus, and macroglossia.","definition_xrefs":["Orphanet:96191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 6 disorder","termid":"MONDO:0700013"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal uniparental disomy of chromosome 6","secondary_identifiers":["icd11.foundation:1267556610","MEDGEN:1662050","GARD:19340","UMLS:C4749378"],"synonyms":[{"name":"UPD(6)pat","type":"exact"},{"name":"paternal uniparental disomy of chromosome type 6","type":"exact"}],"termid":"MONDO:0019921","xrefs":{"Monarch":{"xref_id":"0019921"}}}


id: PBO:0080944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger B-box domain containing","termid":"PBO:0080944"}


id: PBO:0005296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein, DNAJC11 family","termid":"PBO:0005296"}


id: MONDO:0007429
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88461],"is_not":false,"summary":null,"term":"MONDO:0007429"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy plus syndrome","termid":"MONDO:0014720"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"optic atrophy with or without deafness, ophthalmoplegia, myopathy, ataxia, and neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:125250","UMLS:C3276549","MEDGEN:478179","GARD:15057"],"synonyms":[{"name":"dominant optic atrophy plus syndrome","type":"related"},{"name":"optic atrophy 1 and deafness","type":"related"},{"name":"optic atrophy plus syndrome","type":"exact"},{"name":"optic atrophy with or without deafness, ophthalmoplegia, myopathy, ataxia, and neuropathy","type":"exact"}],"termid":"MONDO:0007429","terms_by_termid":{"MONDO:0007429":null},"xrefs":{"Monarch":{"xref_id":"0007429"}}}


id: PBO:0004278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type zinc finger protein","termid":"PBO:0004278"}


id: PBO:0059278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37","termid":"PBO:0059278"}


id: PBO:0051038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like and fibronectin type III domain containing 1","termid":"PBO:0051038"}


id: FYPO:0005333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to methyl methanesulfonate is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein level during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased protein accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"increased protein level during cellular response to MMS","type":"exact"},{"name":"increased protein level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0005333"}


id: PBO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp4 (predicted)","termid":"PBO:0000459"}


id: PBO:0077611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 2","termid":"PBO:0077611"}


id: GO:0019065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any receptor-mediated endocytosis that is involved in the uptake of a virus into a host cell; successive instances of virus endocytosis result in the accumulation of virus particles within the cell.","definition_xrefs":["GOC:jl","ISBN:0781702534","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"endocytosis involved in viral entry into host cell","termid":"GO:0075509"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"receptor-mediated endocytosis of virus by host cell","secondary_identifiers":["Reactome:R-HSA-168275"],"synonyms":[{"name":"receptor mediated endocytosis by host of virus particle","type":"exact"},{"name":"receptor mediated endocytosis of virus by host","type":"exact"},{"name":"receptor mediated endocytosis of virus particle by host","type":"exact"},{"name":"receptor-mediated endocytosis of virus by host","type":"exact"},{"name":"viral entry into host cell via receptor-mediated endocytosis","type":"related"},{"name":"viral receptor mediated endocytosis","type":"exact"},{"name":"virus receptor-mediated endocytosis by host","type":"exact"}],"termid":"GO:0019065"}


id: GO:0102530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aclacinomycin T(1+) + H2O = 15-demethylaclacinomycin T + methanol + H+.","definition_xrefs":["EC:3.1.1.95","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"aclacinomycin T methylesterase activity","secondary_identifiers":["RHEA:37891","MetaCyc:RXN-14703"],"termid":"GO:0102530"}


id: PBO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human RNF4 family","termid":"PBO:0001116"}


id: PBO:0044216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortactin binding protein 2","termid":"PBO:0044216"}


id: PBO:0060157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 5 (pseudogene)","termid":"PBO:0060157"}


id: PBO:0003211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFC-like complex subunit Ctf18","termid":"PBO:0003211"}


id: PBO:0076418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9b pseudogene 1","termid":"PBO:0076418"}


id: GO:0070142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Evagination of a membrane to form a synaptic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle budding from membrane","termid":"GO:0006900"},{"relation_name":"part_of","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"synaptic vesicle budding","termid":"GO:0070142"}


id: MONDO:0002715
data:
  {"annotated_genes":["SJAG_01419","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86881,89095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"}]},"cv_name":"mondo","definition":"Primary or metastatic malignant neoplasm involving the uterine corpus and/or the cervix.","definition_xrefs":["NCIT:C3552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"tumor of uterus","termid":"MONDO:0021353"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0153567","MESH:D014594","ICD9:179","DOID:363","MEDGEN:57791","SCTID:371973000"],"synonyms":[{"name":"CA - cancer of uterus","type":"exact"},{"name":"cancer of the uterus","type":"exact"},{"name":"cancer of uterus","type":"exact"},{"name":"malignant neoplasm of the uterus","type":"exact"},{"name":"malignant neoplasm of uterus","type":"exact"},{"name":"malignant tumor of the uterus","type":"exact"},{"name":"malignant tumor of uterus","type":"exact"},{"name":"malignant tumour of the uterus","type":"exact"},{"name":"malignant tumour of uterus","type":"exact"},{"name":"malignant uterine neoplasm","type":"exact"},{"name":"malignant uterine tumor","type":"exact"},{"name":"malignant uterine tumour","type":"exact"},{"name":"malignant uterus neoplasm","type":"exact"},{"name":"neoplasm of uterus","type":"broad"},{"name":"tumor of uterus","type":"broad"},{"name":"tumour of uterus","type":"broad"},{"name":"uterine cancer","type":"exact"},{"name":"uterine tumor","type":"broad"},{"name":"uterine tumour","type":"broad"},{"name":"uterus cancer","type":"exact"},{"name":"uterus neoplasm","type":"broad"}],"termid":"MONDO:0002715","terms_by_termid":{"MONDO:0011962":null},"xrefs":{"Monarch":{"xref_id":"0002715"}}}


id: GO:1901355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rapamycin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to rapamycin","termid":"GO:1901355"}


id: MOD:00187
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes an L-tyrosine residue with L-thyroxine.","definition_xrefs":["Unimod:398","ChEBI:18332","PubMed:6704086","RESID:AA0178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodinated tyrosine","termid":"MOD:00998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-thyroxine","synonyms":[{"name":"(S)-2-amino-3-[4-(4-hydroxy-3,5-diiodophenoxy)-3,5-diiodophenyl]propanoic acid","type":"exact"},{"name":"3',3'',5',5''-tetraiodo-L-thyronine","type":"exact"},{"name":"3,3',5,5'-tetraiodo-L-thyronine","type":"exact"},{"name":"3,5,3',5'-tetraiodo-L-thyronine","type":"exact"},{"name":"4-(4-hydroxy-3,5-diiodophenoxy)-3,5-diiodo-L-phenylalanine","type":"exact"},{"name":"I4Thy","type":"exact"},{"name":"L-thyroxine","type":"exact"},{"name":"MOD_RES Thyroxine","type":"exact"},{"name":"O-(4-hydroxy-3,5-diiodophenyl)-3,5-diiodo-L-tyrosine","type":"exact"},{"name":"T4","type":"exact"},{"name":"Thyroxine","type":"related"},{"name":"tetraiodo","type":"related"}],"termid":"MOD:00187"}


id: MONDO:0019799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare form of chronic hepatic porphyria characterized by bullous photodermatitis.","definition_xrefs":["Orphanet:95159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial porphyria cutanea tarda","termid":"MONDO:0008296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0019142","MONDO:0004335","MONDO:0002515","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"hepatoerythropoietic porphyria","secondary_identifiers":["GARD:6169","MEDGEN:57940","MESH:D017121","NANDO:1200819","UMLS:C0162569","SCTID:111386004","DOID:5230","icd11.foundation:214080046","NCIT:C84754","NANDO:2201270"],"synonyms":[{"name":"HEP","type":"exact"}],"termid":"MONDO:0019799","xrefs":{"Monarch":{"xref_id":"0019799"}}}


id: PBO:0040794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta globin locus transcript 3","termid":"PBO:0040794"}


id: PBO:0080455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2A","termid":"PBO:0080455"}


id: GO:0052417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving protein macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont protein (obsolete GO:0052417)","termid":"GO:0052417"}


id: PBO:0003860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circularly permuted 1,3-beta-glucanase (predicted)","termid":"PBO:0003860"}


id: PBO:0053627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 671","termid":"PBO:0053627"}


id: GO:0034955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxydiphenyl ether + O2 + H2O = 2-hydroxymuconate + phenol.","definition_xrefs":["UM-BBD_reactionID:r1451"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-dihydroxydiphenyl ether dioxygenase activity (obsolete GO:0034955)","termid":"GO:0034955"}


id: GO:0007273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of synapse (obsolete GO:0007273)","synonyms":[{"name":"regulation of synapse","type":"exact"}],"termid":"GO:0007273"}


id: FYPO:0005074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the anaphase-promoting complex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:9264466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level in anaphase-promoting complex","synonyms":[{"name":"normal protein level in APC","type":"exact"}],"termid":"FYPO:0005074"}


id: PBO:0042315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD33 molecule","termid":"PBO:0042315"}


id: FYPO:0001600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which isoleucine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal isoleucine import","synonyms":[{"name":"normal L-isoleucine import","type":"exact"},{"name":"normal L-isoleucine import across plasma membrane","type":"exact"},{"name":"normal isoleucine import during mitotic cell cycle","type":"related"},{"name":"normal isoleucine import during vegetative growth","type":"exact"},{"name":"normal isoleucine import into cell","type":"exact"},{"name":"normal isoleucine uptake","type":"exact"}],"termid":"FYPO:0001600"}


id: MONDO:1012475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"recurrent uveitis, non-human animal","termid":"MONDO:1011997"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent uveitis, horse","secondary_identifiers":["OMIA:001872-9796"],"termid":"MONDO:1012475","xrefs":{"Monarch":{"xref_id":"1012475"}}}


id: PBO:0064857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 15A","termid":"PBO:0064857"}


id: MONDO:0012220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Griscelli syndrome characterized by isolated silvery gray sheen of the hair and hypopigmentation of the skin that has material basis in mutation in the MLPH or MYO5A genes.","definition_xrefs":["DOID:0060834","PMID:12148598","PMID:12897212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Griscelli syndrome","termid":"MONDO:0018306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"Griscelli syndrome type 3","secondary_identifiers":["OMIM:609227","Orphanet:79478","icd11.foundation:1959052636","UMLS:C1836573","GARD:9715","ICD10CM:E70.3","MEDGEN:373124","MESH:C537303"],"synonyms":[{"name":"GS3","type":"exact"},{"name":"Griscelli disease type 3","type":"related"},{"name":"Griscelli syndrome type 3","type":"exact"},{"name":"Griscelli syndrome, type 3","type":"related"},{"name":"Griscelli-PruniC)ras syndrome type 3","type":"exact"},{"name":"Griscelli-Pruniéras syndrome type 3","type":"exact"},{"name":"Griscelli-Pruni��ras syndrome type 3","type":"exact"},{"name":"hypomelanosis with no immunologic or neurologic manifestations","type":"related"}],"termid":"MONDO:0012220","xrefs":{"Monarch":{"xref_id":"0012220"}}}


id: PBO:0083565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ASK1","termid":"PBO:0083565"}


id: PBO:0067161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 214, pseudogene","termid":"PBO:0067161"}


id: PBO:0050841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IBA57 divergent transcript","termid":"PBO:0050841"}


id: MONDO:0800206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa dystrophica with subcorneal cleavage","secondary_identifiers":["UMLS:C2675683","MEDGEN:436495"],"synonyms":[{"name":"EBDSC","type":"exact"}],"termid":"MONDO:0800206","xrefs":{"Monarch":{"xref_id":"0800206"}}}


id: PBO:0004045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export receptor, Tap, nucleoporin Mex67","termid":"PBO:0004045"}


id: RO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which the partners are related via a feeding relationship.","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophically_interacts_with","termid":"RO:0002438"}


id: PBO:0090060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized protein, human HID1 ortholog 3, implicated in vesicle-mediated transport","termid":"PBO:0090060"}


id: PBO:0066724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 21","termid":"PBO:0066724"}


id: PBO:0065499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis susceptibility 1 candidate 1","termid":"PBO:0065499"}


id: FYPO:0007208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which microtubule bundle length is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal microtubule bundle","termid":"FYPO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal microtubule bundle length during mitotic interphase","synonyms":[{"name":"normal interphase microtubule bundle length","type":"exact"},{"name":"normal microtubule bundle length during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0007208"}


id: GO:0062203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + peregrinol diphosphate = diphosphate + viteagnusin D.","definition_xrefs":["PMID:29315936","RHEA:62180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"Viteagnusin D synthase activity","termid":"GO:0062203"}


id: MONDO:0021540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hamartoma (disease) that involves the lung.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"},{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hamartoma of lung","secondary_identifiers":["ICD9:235.7","MEDGEN:101774","SCTID:254644003","NCIT:C3497","UMLS:C0149927"],"synonyms":[{"name":"hamartoma of the lung","type":"exact"},{"name":"lung chondroid hamartoma","type":"exact"},{"name":"lung hamartoma","type":"exact"},{"name":"lung hamartoma (disease)","type":"exact"},{"name":"pulmonary hamartoma","type":"exact"}],"termid":"MONDO:0021540","xrefs":{"Monarch":{"xref_id":"0021540"}}}


id: GO:0016672
data:
  {"annotated_genes":["SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070224"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces quinone or a related compound.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.8.5.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, quinone or similar compound as acceptor","type":"exact"}],"termid":"GO:0016672","terms_by_termid":{"GO:0070224":null}}


id: SO:0000439
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ring chromosome is a chromosome whose arms have fused together to form a ring in an inverted fashion, often with the loss of the ends of the chromosome.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"},{"relation_name":"is_a","term_name":"ring_chromosome","termid":"SO:1000045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_ring_chromosome","synonyms":[{"name":"inverted ring chromosome","type":"exact"}],"termid":"SO:0000439"}


id: PBO:0064473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 4, accessory subunit","termid":"PBO:0064473"}


id: MONDO:0001122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the maxillary sinus that typically lasts beyond eight weeks. It is caused by infections, allergies, and the presence of sinus polyps or a deviated septum. Signs and symptoms include headache, nasal discharge, swelling in the face, dizziness, and breathing difficulties.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maxillary sinusitis","termid":"MONDO:0005842"},{"relation_name":"is_a","term_name":"chronic rhinosinusitis","termid":"MONDO:0006031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic maxillary sinusitis","secondary_identifiers":["NCIT:C34477","icd11.foundation:1372580647","MEDGEN:966","DOID:10792","ICD10CM:J32.0","ICD9:473.0","SCTID:35923002","UMLS:C0008698"],"synonyms":[{"name":"chronic antritis","type":"exact"},{"name":"maxillary sinusitis, chronic","type":"exact"}],"termid":"MONDO:0001122","xrefs":{"Monarch":{"xref_id":"0001122"}}}


id: PBO:0058645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6774","termid":"PBO:0058645"}


id: PBO:0081733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 664","termid":"PBO:0081733"}


id: GO:0050608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + vanillin = 2 H+ + NADH + vanillate.","definition_xrefs":["RHEA:13309","EC:1.2.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"vanillin dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05699","MetaCyc:1.2.1.67-RXN"],"synonyms":[{"name":"vanillin:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050608"}


id: PBO:0039327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 15-lipoxygenase type B","termid":"PBO:0039327"}


id: PBO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snu23 (predicted)","termid":"PBO:0000528"}


id: MONDO:0030878
data:
  {"annotated_genes":["SJAG_01642"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87535],"is_not":false,"summary":null,"term":"MONDO:0030878"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01642":null},"genotype_count":0,"is_obsolete":false,"name":"Kaya-Barakat-Masson syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1725501","OMIM:619125","GARD:18537","UMLS:C5436856"],"synonyms":[{"name":"KABAMAS","type":"exact"}],"termid":"MONDO:0030878","terms_by_termid":{"MONDO:0030878":null},"xrefs":{"Monarch":{"xref_id":"0030878"}}}


id: PBO:0081191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 4","termid":"PBO:0081191"}


id: GO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an enzyme active site via modification of peptidyl-cysteine to peptidyl-L-cysteine persulfide.","definition_xrefs":["RESID:AA0269"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via cysteine modification to L-cysteine persulfide (obsolete GO:0018192)","synonyms":[{"name":"enzyme active site formation via L-cysteine persulphide","type":"exact"}],"termid":"GO:0018192"}


id: MONDO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic vascular disorder that affects the liver. Representative examples include veno-occlusive disease, hemangioma, lymphangioma, and angiosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatic vascular disorder","secondary_identifiers":["UMLS:C0400923","SCTID:235878005","DOID:272","MEDGEN:140779","NCIT:C35442","ICD9:573.8"],"synonyms":[{"name":"hepatic vascular disorder","type":"exact"},{"name":"liver vascular disorder","type":"exact"},{"name":"vascular disorder of liver","type":"exact"}],"termid":"MONDO:0002405","xrefs":{"Monarch":{"xref_id":"0002405"}}}


id: GO:0090475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein processing achieved by the cleavage of a peptide bond after two consecutive lysine amino acid residues within a protein.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibasic protein processing","termid":"GO:0090472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"lys-lys specific dibasic protein processing","termid":"GO:0090475"}


id: PBO:0057528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 645","termid":"PBO:0057528"}


id: PBO:0091377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 family heat shock protein Ssa1","termid":"PBO:0091377"}


id: PBO:0086386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative calcium channel involved in calcium release under hypotonic stress; required for uptake of FAD into endoplasmic reticulum; involved in cell wall maintenance; FLC2 has a paralog, YOR365C, that arose from the whole genome duplication","termid":"PBO:0086386"}


id: MONDO:0003121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the middle cranial fossa.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle cranial fossa meningioma","secondary_identifiers":["MEDGEN:277369","UMLS:C1334757","NCIT:C5586","DOID:4749"],"synonyms":[{"name":"meningioma (disease) of middle cranial fossa","type":"exact"},{"name":"meningioma of middle cranial fossa","type":"exact"},{"name":"meningioma of the middle cranial fossa","type":"exact"},{"name":"middle cranial fossa meningioma (disease)","type":"exact"}],"termid":"MONDO:0003121","xrefs":{"Monarch":{"xref_id":"0003121"}}}


id: PBO:0089156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA-like domain protein","termid":"PBO:0089156"}


id: GO:0043750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of one or more alpha-D-mannose residues from GDP-mannose to positions 2,6 and others in 1-phosphatidyl-myo-inositol.","definition_xrefs":["EC:2.4.1.345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol alpha-mannosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.57-RXN","RHEA:47368"],"synonyms":[{"name":"GDP mannose-phosphatidyl-myo-inositol alpha-mannosyltransferase activity","type":"exact"},{"name":"GDP mannose:1-phosphatidyl-myo-inositol alpha-D-mannosyltransferase activity","type":"exact"},{"name":"GDP-mannose:1-phosphatidyl-1D-myo-inositol alpha-D-mannosyltransferase activity","type":"exact"},{"name":"GDPmannose:1-phosphatidyl-myo-inositol alpha-D-mannosyltransferase activity","type":"exact"},{"name":"guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase activity","type":"exact"},{"name":"phosphatidyl-myo-inositol alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0043750"}


id: MONDO:0007440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bipolar I disorder","termid":"MONDO:0001866"},{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 1","secondary_identifiers":["MESH:C565111","MEDGEN:377615","OMIM:125480","UMLS:C1852197","DOID:0080220"],"synonyms":[{"name":"MAFD1","type":"exact"},{"name":"MAJOR affective disorder 1","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 1","type":"exact"},{"name":"manic-depressive psychosis","type":"related"},{"name":"manic-depressive psychosis, autosomal","type":"related"}],"termid":"MONDO:0007440","xrefs":{"Monarch":{"xref_id":"0007440"}}}


id: PBO:0038563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding transcription modulator","termid":"PBO:0038563"}


id: PBO:0038810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 17","termid":"PBO:0038810"}


id: GO:0004648
data:
  {"annotated_genes":["SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81395],"is_not":false,"summary":null,"term":"GO:0004648"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + 2-oxoglutarate = 3-phosphonooxypyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"O-phospho-L-serine:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:14329","MetaCyc:PSERTRANSAM-RXN","GO:0004646","Reactome:R-HSA-977333"],"synonyms":[{"name":"3-O-phospho-L-serine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"3-phosphoserine aminotransferase activity","type":"related"},{"name":"3PHP transaminase activity","type":"related"},{"name":"L-phosphoserine aminotransferase activity","type":"related"},{"name":"PSAT activity","type":"related"},{"name":"PdxC","type":"related"},{"name":"SerC","type":"related"},{"name":"hydroxypyruvic phosphate--glutamic transaminase activity","type":"related"},{"name":"phosphohydroxypyruvate transaminase activity","type":"related"},{"name":"phosphohydroxypyruvic--glutamic transaminase activity","type":"related"},{"name":"phosphoserine aminotransferase activity","type":"broad"},{"name":"phosphoserine transaminase activity","type":"broad"}],"termid":"GO:0004648","terms_by_termid":{"GO:0004648":null}}


id: MONDO:0022934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Davis Lafer syndrome","secondary_identifiers":["MEDGEN:419708","MESH:C535989","UMLS:C2931077"],"synonyms":[{"name":"Lafer Davis syndrome","type":"related"},{"name":"intellectual disability unusual facies Davis Lafer type","type":"related"},{"name":"mental retardation unusual facies Davis Lafer type","type":"related"}],"termid":"MONDO:0022934","xrefs":{"Monarch":{"xref_id":"0022934"}}}


id: PBO:0080594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 24","termid":"PBO:0080594"}


id: PBO:0003527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein Hob3","termid":"PBO:0003527"}


id: PBO:0070964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 2","termid":"PBO:0070964"}


id: GO:0102506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-feruloyl-beta-D-glucose = cyanin betaine + ferulate + H+.","definition_xrefs":["RHEA:35427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose) activity","secondary_identifiers":["MetaCyc:RXN-13967","EC:2.4.1.299","KEGG_REACTION:R10261"],"termid":"GO:0102506"}


id: PBO:0084086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor for Gpa1p; amplifies G protein signaling; functions as a chaperone under ATP-depleted oxidative stress conditions; subunit of GET complex, involved in ATP dependent Golgi to ER trafficking and insertion of tail-anchored (TA) proteins into ER membrane under non-stress conditions; binds as dimer to transmembrane domain (TMD) cargo, shielding TMDs from aqueous solvent; protein abundance increases under DNA replication stress","termid":"PBO:0084086"}


id: GO:0009465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete soluble cytochrome b562 (obsolete GO:0009465)","synonyms":[{"name":"soluble cytochrome b562","type":"exact"}],"termid":"GO:0009465"}


id: MONDO:0017229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 12p is a rare partial autosomal monosomy characterized by language development delay with childhood apraxia of speech, mild intellectual disability, behavourial abnormalities (autistic spectrum disorder, attention deficit hyperactivity disorder, anxiety) and mildly dysmorphic nonspecific features. Additional clinical features may include muscular hypotonia and joint laxity, hernias and microcephaly.","definition_xrefs":["Orphanet:280325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 12p deletion","termid":"MONDO:0022174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 12p","secondary_identifiers":["UMLS:C4749581","GARD:21078","MEDGEN:1648932"],"synonyms":[{"name":"12p13.33 microdeletion syndrome","type":"exact"},{"name":"Del(12)(p13.33)","type":"exact"},{"name":"distal deletion 12p","type":"exact"},{"name":"distal monosomy type 12p","type":"exact"}],"termid":"MONDO:0017229","xrefs":{"Monarch":{"xref_id":"0017229"}}}


id: GO:0080031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + methyl salicylate = H+ + methanol + salicylate.","definition_xrefs":["RHEA:33611","PMID:18467465","PMID:18643994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"methyl salicylate esterase activity","secondary_identifiers":["MetaCyc:RXNQT-4366"],"synonyms":[{"name":"MESA esterase activity","type":"exact"},{"name":"methyl SA esterase activity","type":"exact"},{"name":"methylsalicylate esterase activity","type":"exact"},{"name":"salicylic acid methyl ester esterase activity","type":"exact"}],"termid":"GO:0080031"}


id: GO:0031856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a parathyroid hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"parathyroid hormone receptor binding","synonyms":[{"name":"parathyroid hormone receptor ligand","type":"narrow"}],"termid":"GO:0031856"}


id: PBO:0076011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1 pseudogene 2","termid":"PBO:0076011"}


id: PBO:0113151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hemoprotein; protein of unknown function that localizes to the mitochondrial inner mnembrane; null mutant displays elevated frequency of mitochondrial genome loss; contains a chalcone isomerase (CHI) domain, a predicted N-terminal transmembrane domain and an N-terminal mitochondrial targeting sequence; lacks CHI catalytic activity","termid":"PBO:0113151"}


id: MONDO:0019112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer associated retinopathy (CAR) is a paraneoplastic disease of the eye associated with the presence of extraocular malignancy and circulating autoantibodies against retinal proteins.","definition_xrefs":["Orphanet:71505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"paraneoplastic neurologic syndrome","termid":"MONDO:0018215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cancer-associated retinopathy","secondary_identifiers":["GARD:18912","ICD9:362.10","MEDGEN:729915","SCTID:404663008","MESH:D059545","UMLS:C1321315","icd11.foundation:1216073790"],"synonyms":[{"name":"CAR syndrome","type":"exact"},{"name":"paraneoplastic retinopathy","type":"exact"}],"termid":"MONDO:0019112","xrefs":{"Monarch":{"xref_id":"0019112"}}}


id: MONDO:0015515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carnitine palmitoyltransferase II (CPT II) deficiency is an inherited metabolic disorder that affects mitochondrial oxidation of long chain fatty acids (LCFA). Three forms of CPT II deficiency have been described: a myopathic form, a severe infantile form and a neonatal form.","definition_xrefs":["Orphanet:157"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular lipidosis (obsolete MONDO:0016117)","termid":"MONDO:0016117"},{"relation_name":"is_a","term_name":"carnitine palmitoyl transferase deficiency","termid":"MONDO:0700284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"carnitine palmitoyltransferase II deficiency","secondary_identifiers":["NANDO:2200510","SCTID:238002005","DOID:0060235","ICD9:277.85","MESH:C535589","NANDO:2201134","GARD:1121","HGNC:2330","MEDGEN:137978","NANDO:1200971","NANDO:2201133","NCIT:C114766","icd11.foundation:204058632","UMLS:C0342790"],"synonyms":[{"name":"CPT II deficiency","type":"exact"},{"name":"CPT-II","type":"exact"},{"name":"CPT2","type":"exact"},{"name":"CPTII","type":"exact"},{"name":"Carnitine palmitoyltransferase 2 deficiency","type":"related"},{"name":"Carnitine palmitoyltransferase II (CPT II) deficiency","type":"related"},{"name":"Carnitine palmitoyltransferase deficiency type 2","type":"exact"},{"name":"carnitine palmitoyltransferase II deficiency","type":"exact"},{"name":"infantile carnitine palmitoyltransferase II deficiency","type":"exact"},{"name":"late-onset carnitine palmitoyltransferase II deficiency","type":"exact"},{"name":"lethal neonatal carnitine palmitoyltransferase II deficiency","type":"exact"}],"termid":"MONDO:0015515","xrefs":{"Monarch":{"xref_id":"0015515"}}}


id: MONDO:0022687
data:
  {"annotated_genes":["SJAG_02377","SJAG_02119","SJAG_00059","SJAG_04822","SJAG_00933","SJAG_00380","SJAG_00421","SJAG_01317","SJAG_01356","SJAG_00686","SJAG_04622","SJAG_04233","SJAG_02680","SJAG_03862","SJAG_04641","SJAG_03692","SJAG_01168","SJAG_01286","SJAG_03393","SJAG_02242","SJAG_00645","SJAG_03923","SJAG_01179","SJAG_02084","SJAG_00087","SJAG_04418","SJAG_01400","SJAG_02885","SJAG_01945","SJAG_05212","SJAG_05332","SJAG_04533","SJAG_02457","SJAG_00526","SJAG_01438","SJAG_02196","SJAG_00863","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014744"},{"annotations":[87266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[87241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[88629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[88142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012784"},{"annotations":[88862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013392"},{"annotations":[88542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[87002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[87115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014601"},{"annotations":[88290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[86857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"},{"annotations":[88004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[88618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[87380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100340"},{"annotations":[88937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958231"},{"annotations":[87830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033482"},{"annotations":[87741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[87518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[87083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[87596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[89098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[87035,87036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[87021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[87480,87481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[87675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[88125,88124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[88988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"},{"annotations":[87260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033115"},{"annotations":[87331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032923"},{"annotations":[88398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030312"},{"annotations":[88161,88160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030318"},{"annotations":[88167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030323"},{"annotations":[87438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[88448,88449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"},{"annotations":[87453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010547"},{"annotations":[87584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","definition":"Degeneration of the cerebellum. It may be an inherited condition, a paraneoplastic syndrome, or secondary to autoimmune disorders.","definition_xrefs":["NCIT:C84624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar disorder","termid":"MONDO:0002427"},{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00087":null,"SJAG_00380":null,"SJAG_00421":null,"SJAG_00526":null,"SJAG_00645":null,"SJAG_00686":null,"SJAG_00863":null,"SJAG_00933":null,"SJAG_01168":null,"SJAG_01179":null,"SJAG_01286":null,"SJAG_01317":null,"SJAG_01356":null,"SJAG_01400":null,"SJAG_01438":null,"SJAG_01945":null,"SJAG_02084":null,"SJAG_02119":null,"SJAG_02196":null,"SJAG_02242":null,"SJAG_02377":null,"SJAG_02457":null,"SJAG_02680":null,"SJAG_02885":null,"SJAG_03393":null,"SJAG_03692":null,"SJAG_03720":null,"SJAG_03862":null,"SJAG_03923":null,"SJAG_04233":null,"SJAG_04418":null,"SJAG_04533":null,"SJAG_04622":null,"SJAG_04641":null,"SJAG_04822":null,"SJAG_05212":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"cerebellar degeneration","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:75496","DOID:1443","UMLS:C0262404","ICD9:331.9","SCTID:418143002","SCTID:95646004"],"synonyms":[{"name":"Brain degeneration","type":"exact"},{"name":"cerebellar Degeneration","type":"exact"},{"name":"cerebellar degeneration","type":"exact"},{"name":"cerebellum neurodegenerative disease","type":"exact"},{"name":"cerebral degeneration","type":"related"},{"name":"neurodegenerative disease of cerebellum","type":"exact"}],"termid":"MONDO:0022687","terms_by_termid":{"MONDO:0007574":null,"MONDO:0008458":null,"MONDO:0008840":null,"MONDO:0008943":null,"MONDO:0010524":null,"MONDO:0010547":null,"MONDO:0011330":null,"MONDO:0011397":null,"MONDO:0011402":null,"MONDO:0011439":null,"MONDO:0011781":null,"MONDO:0011801":null,"MONDO:0012246":null,"MONDO:0012450":null,"MONDO:0012784":null,"MONDO:0013392":null,"MONDO:0013594":null,"MONDO:0013886":null,"MONDO:0014104":null,"MONDO:0014417":null,"MONDO:0014503":null,"MONDO:0014557":null,"MONDO:0014601":null,"MONDO:0014744":null,"MONDO:0014934":null,"MONDO:0016163":null,"MONDO:0018996":null,"MONDO:0030312":null,"MONDO:0030318":null,"MONDO:0030323":null,"MONDO:0032923":null,"MONDO:0033115":null,"MONDO:0033482":null,"MONDO:0044720":null,"MONDO:0100340":null,"MONDO:0958231":null},"xrefs":{"Monarch":{"xref_id":"0022687"}}}


id: PBO:0046576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 18","termid":"PBO:0046576"}


id: PBO:0049525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z variant histone 1","termid":"PBO:0049525"}


id: MONDO:1011973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyknodysostosis, non-human animal","secondary_identifiers":["OMIA:002607"],"termid":"MONDO:1011973","xrefs":{"Monarch":{"xref_id":"1011973"}}}


id: PBO:0078733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 5-2","termid":"PBO:0078733"}


id: PBO:0073640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 27, pseudogene","termid":"PBO:0073640"}


id: GO:0046667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death that occurs in the retina to remove excess cells between ommatidia, thus resulting in a hexagonal lattice, precise with respect to cell number and position surrounding each ommatidium.","definition_xrefs":["PMID:12006672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal cell programmed cell death","termid":"GO:0046666"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye retinal cell programmed cell death","termid":"GO:0046667"}


id: PBO:0078831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon CGG) 1-2","termid":"PBO:0078831"}


id: PBO:0073524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 binding domain protein 5 like","termid":"PBO:0073524"}


id: MONDO:0014070
data:
  {"annotated_genes":["SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86981],"is_not":false,"summary":null,"term":"MONDO:0014070"}]},"cv_name":"mondo","definition":"Oculocutaneous albinism type 7 (OCA7), formerly called OCA5, is a form of oculocutaneous albinism (OCA) characterized by skin and hair hypopigmentation, nystagmus and iris transillumination.","definition_xrefs":["Orphanet:352745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism","termid":"MONDO:0018910"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"oculocutaneous albinism type 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615179","SCTID:722059002","UMLS:C3808786","DOID:0070100","MEDGEN:815116","GARD:17531"],"synonyms":[{"name":"LRMDA oculocutaneous albinism","type":"exact"},{"name":"OCA7","type":"exact"},{"name":"albinism, oculocutaneous, type 7","type":"related"},{"name":"albinism, oculocutaneous, type VII","type":"related"},{"name":"oculocutaneous albinism caused by mutation in LRMDA","type":"exact"},{"name":"oculocutaneous albinism type VII","type":"related"}],"termid":"MONDO:0014070","terms_by_termid":{"MONDO:0014070":null},"xrefs":{"Monarch":{"xref_id":"0014070"}}}


id: PBO:0064340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmalemma vesicle associated protein","termid":"PBO:0064340"}


id: MONDO:0008833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any renal-hepatic-pancreatic dysplasia in which the cause of the disease is a mutation in the NPHP3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal-hepatic-pancreatic dysplasia","termid":"MONDO:0017417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal-hepatic-pancreatic dysplasia 1","secondary_identifiers":["MEDGEN:811626","GARD:18431","OMIM:208540","UMLS:C3715199"],"synonyms":[{"name":"NPHP3 renal-hepatic-pancreatic dysplasia","type":"exact"},{"name":"RHPD1","type":"related"},{"name":"Rhpd","type":"related"},{"name":"renal-hepatic-pancreatic dysplasia 1","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia caused by mutation in NPHP3","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia type 1","type":"exact"}],"termid":"MONDO:0008833","xrefs":{"Monarch":{"xref_id":"0008833"}}}


id: GO:0047149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homocysteine + dimethylsulfonioacetate = (methylthio)acetate + L-methionine + H+.","definition_xrefs":["RHEA:22788","EC:2.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"thetin-homocysteine S-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04153","MetaCyc:2.1.1.3-RXN"],"synonyms":[{"name":"dimethylsulfonioacetate:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"dimethylthetin-homocysteine methyltransferase activity","type":"related"},{"name":"thetin-homocysteine methylpherase activity","type":"related"}],"termid":"GO:0047149"}


id: PBO:0004949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Spf38","termid":"PBO:0004949"}


id: GO:0045495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Differentiated cytoplasm associated with a pole (animal, vegetal, anterior, or posterior) of an oocyte, egg or early embryo.","definition_xrefs":["GOC:kmv","PMID:17113380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"pole plasm","synonyms":[{"name":"germ plasm","type":"narrow"},{"name":"polar plasm","type":"exact"}],"termid":"GO:0045495"}


id: GO:0052177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host xylan (obsolete GO:0052177)","termid":"GO:0052177"}


id: PBO:0056878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial contact site and cristae organizing system subunit 10","termid":"PBO:0056878"}


id: PR:Q9USS8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USS8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.02c","synonyms":[{"name":"Spom972h-SPBC4.02c","type":"exact"}],"termid":"PR:Q9USS8"}


id: FYPO:0007943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal during the meiotic cell cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromatin organization during meiotic cell cycle","termid":"FYPO:0007943"}


id: GO:0150151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-17A production.","definition_xrefs":["PMID:27901018","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"regulates","term_name":"interleukin-17A production","termid":"GO:0097087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-17A production","synonyms":[{"name":"regulation of interleukin-17A biosynthetic process","type":"narrow"}],"termid":"GO:0150151"}


id: SO:0100015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The more polar, carboxy-terminal region of the signal peptide (approx 3-7 aa).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"},{"relation_name":"part_of","term_name":"signal_peptide","termid":"SO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"c_terminal_region","synonyms":[{"name":"C-region","type":"related"}],"termid":"SO:0100015"}


id: PBO:0015239
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(8)","termid":"PBO:0015239"}


id: PR:Q9UTN8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc14 gene.","definition_xrefs":["UniProtKB:Q9UTN8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.03","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc14","type":"exact"},{"name":"ubiquitin carrier protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTN8"}


id: PR:P50520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol 3-kinase catalytic subunit type 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01959","PANTHER:PTHR10048:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase vps34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.05","secondary_identifiers":["UniProtKB:P50520"],"synonyms":[{"name":"PI3-kinase vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIK3C3","type":"exact"},{"name":"vacuolar protein sorting-associated protein 34 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50520"}


id: GO:0140738
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of NLRP6, PYCARD/ASC and caspase-1 or caspase-4/caspase-11.","definition_xrefs":["PMID:30674671","PMID:34678144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NLRP6 inflammasome complex","termid":"GO:0140738"}


id: GO:1905904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesoderm formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:rph","GOC:BHF_miRNA","GOC:BHF","PMID:23939491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesoderm formation","termid":"GO:1905902"},{"relation_name":"is_a","term_name":"positive regulation of mesoderm development","termid":"GO:2000382"},{"relation_name":"positively_regulates","term_name":"mesoderm formation","termid":"GO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesoderm formation","synonyms":[{"name":"activation of mesoderm formation","type":"narrow"},{"name":"up regulation of mesoderm formation","type":"exact"},{"name":"up-regulation of mesoderm formation","type":"exact"},{"name":"upregulation of mesoderm formation","type":"exact"}],"termid":"GO:1905904"}


