# terms

id: MONDO:0500000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by episodes of swelling under the skin (angioedema) and an elevated number of the white blood cells known as eosinophils (eosinophilia). During these episodes, symptoms of hives (urticaria), fever, swelling, weight gain and eosinophilia may occur. Symptoms usually appear every 3-4 weeks and resolve on their own within several days. Other cells may be elevated during the episodes, such as neutrophils and lymphocytes. Although the syndrome is often considered a subtype of the idiopathic hypereosinophilic syndromes, it does not typically have organ involvement or lead to other health concerns.","definition_xrefs":["PMID:25527564","GARD:0013029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"episodic angioedema with eosinophilia","secondary_identifiers":["MEDGEN:725561","icd11.foundation:1511563398","UMLS:C1304198","GARD:13029"],"synonyms":[{"name":"EAE","type":"exact"},{"name":"Gleich syndrome","type":"exact"},{"name":"Gleich's syndrome","type":"exact"}],"termid":"MONDO:0500000","xrefs":{"Monarch":{"xref_id":"0500000"}}}


id: PBO:0029035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_multinucleate_cell_with_elongated_germ_tube","termid":"PBO:0029035"}


id: PBO:0075198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 10","termid":"PBO:0075198"}


id: FYPO:0006330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the attachment of an endoplasmic reticulum membrane to the plasma membrane via molecular tethers occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0061817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased endoplasmic reticulum-plasma membrane tethering","synonyms":[{"name":"abnormal ER-PM contact formation","type":"related"},{"name":"decreased ER-PM tethering","type":"exact"},{"name":"decreased ER-plasma membrane tethering","type":"exact"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during mitotic cell cycle","type":"related"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during vegetative growth","type":"exact"},{"name":"increased ER-PM contact removal","type":"related"},{"name":"increased ER-PM uncoupling","type":"related"},{"name":"reduced endoplasmic reticulum-plasma membrane tethering","type":"exact"}],"termid":"FYPO:0006330"}


id: PBO:0047161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 187 member A","termid":"PBO:0047161"}


id: MONDO:0030756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Stuve-Wiedemann syndrome","termid":"MONDO:0031280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stuve-Wiedemann syndrome 2","secondary_identifiers":["MEDGEN:1805977","UMLS:C5676919","OMIM:619751"],"synonyms":[{"name":"STWS2","type":"exact"},{"name":"Stuve-Wiedemann syndrome 2","type":"exact"}],"termid":"MONDO:0030756","xrefs":{"Monarch":{"xref_id":"0030756"}}}


id: PATO:0001581
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractility which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"contractile","termid":"PATO:0001690"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased contractility","synonyms":[{"name":"low contractility","type":"exact"}],"termid":"PATO:0001581"}


id: GO:0045864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"positively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pteridine metabolic process","synonyms":[{"name":"activation of pteridine metabolic process","type":"narrow"},{"name":"positive regulation of pteridine metabolism","type":"exact"},{"name":"stimulation of pteridine metabolic process","type":"narrow"},{"name":"up regulation of pteridine metabolic process","type":"exact"},{"name":"up-regulation of pteridine metabolic process","type":"exact"},{"name":"upregulation of pteridine metabolic process","type":"exact"}],"termid":"GO:0045864"}


id: PBO:0002587
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Binding Upb Nine of 62 kDa","termid":"PBO:0002587"}


id: PBO:0036056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_subtelomeric_heterochromatin_during_vegetative_growth","termid":"PBO:0036056"}


id: MONDO:1012608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any unconjugated hyperbilirubinemia due to an increase in the bilirubin turnover/production rate and/or decreased hepatic conjugation during fasting that occurs in Bolivian squirrel monkey.","definition_xrefs":["PMID:1316506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperbilirubinemia, non-human animal","termid":"MONDO:1012974"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasting unconjugated hyperbilirubinemia, Bolivian squirrel monkey","secondary_identifiers":["OMIA:000496-27679"],"synonyms":[{"name":"hyperbilirubinaemia I, Bolivian squirrel monkey","type":"related"}],"termid":"MONDO:1012608","xrefs":{"Monarch":{"xref_id":"1012608"}}}


id: PATO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000776 memory value (obsolete PATO:0000776)","termid":"PATO:0000776"}


id: GO:0005107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI-linked ephrin (obsolete GO:0005107)","synonyms":[{"name":"GPI-linked ephrin","type":"exact"}],"termid":"GO:0005107"}


id: GO:0062069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GARP complex.","definition_xrefs":["PMID:20163565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"GARP complex binding","termid":"GO:0062069"}


id: PBO:0043433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNIH3 antisense RNA 2","termid":"PBO:0043433"}


id: PBO:0031796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G2/M_phase_transition","termid":"PBO:0031796"}


id: PBO:0070557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 23","termid":"PBO:0070557"}


id: MONDO:0007786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertrichosis lanuginosa congenita (obsolete MONDO:0007786)","termid":"MONDO:0007786","xrefs":{"Monarch":{"xref_id":"0007786"}}}


id: PBO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom20 (predicted)","termid":"PBO:0000906"}


id: PBO:0076338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 6","termid":"PBO:0076338"}


id: MONDO:0020164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epicanthal fold (obsolete MONDO:0020164)","secondary_identifiers":["Orphanet:98573"],"termid":"MONDO:0020164","xrefs":{"Monarch":{"xref_id":"0020164"}}}


id: PBO:0084465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase-responsive inhibitor of the Ste12p transcription factor; involved in the regulation of mating-specific genes and the invasive growth pathway; related regulators Dig1p and Dig2p bind to Ste12p; DIG1 has a paralog, DIG2, that arose from the whole genome duplication","termid":"PBO:0084465"}


id: PR:O94287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.02 gene.","definition_xrefs":["UniProtKB:O94287","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized chloride channel protein C887.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.02","synonyms":[{"name":"Spom972h-SPBC887.02","type":"exact"}],"termid":"PR:O94287"}


id: MONDO:0009780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal omphalocele-cleft palate syndrome is characterized by the association of omphalocele and cleft palate. It has been described in three daughters of normal unrelated parents. They were all diagnosed at birth. One had omphalocele, posterior cleft palate, and uterus bicornuatus; she died at 2 months. The second had omphalocele, cleft uvula, and hydrocephalus and died at 4 months; the third had omphalocele and cleft palate and died at 1 year. This syndrome is likely to be inherited as an autosomal recessive condition.","definition_xrefs":["Orphanet:2736"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal omphalocele-cleft palate syndrome","secondary_identifiers":["GARD:4079","MESH:C537747","OMIM:258320","MEDGEN:376757","UMLS:C1850317","SCTID:719408007"],"synonyms":[{"name":"Czeizel syndrome","type":"exact"},{"name":"cleft palate-omphalocele syndrome, lethal","type":"related"},{"name":"omphalocele cleft palate syndrome lethal","type":"related"},{"name":"omphalocele-cleft palate syndrome, lethal","type":"related"}],"termid":"MONDO:0009780","xrefs":{"Monarch":{"xref_id":"0009780"}}}


id: MONDO:0007375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial and subepithelial corneal dystrophy","termid":"MONDO:0000763"},{"relation_name":"is_a","term_name":"epithelial-stromal TGFBI dystrophy","termid":"MONDO:0000764"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epithelial basement membrane dystrophy","secondary_identifiers":["MESH:C535477","SCTID:373426005","GARD:9732","MEDGEN:99275","DOID:0060447","Orphanet:98956","OMIM:121820","UMLS:C0521723"],"synonyms":[{"name":"Cogan corneal dystrophy","type":"exact"},{"name":"Cogan microcystic epithelial dystrophy","type":"exact"},{"name":"EBMD","type":"exact"},{"name":"Map-dot-fingerprint dystrophy","type":"exact"},{"name":"Map-dot-fingerprint dystrophy of cornea","type":"related"},{"name":"anterior basement membrane dystrophy","type":"exact"},{"name":"corneal dystrophy, Map-Dot-Fingerprint type","type":"related"},{"name":"corneal dystrophy, anterior basement Membrane","type":"related"},{"name":"corneal dystrophy, epithelial basement MEMBRANE","type":"related"},{"name":"corneal dystrophy, microcystic","type":"related"},{"name":"epithelial basement membrane corneal dystrophy","type":"related"},{"name":"microcystic corneal dystrophy","type":"exact"},{"name":"microcystic dystrophy of the cornea","type":"related"}],"termid":"MONDO:0007375","xrefs":{"Monarch":{"xref_id":"0007375"}}}


id: PBO:0060802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S6","termid":"PBO:0060802"}


id: PBO:0060836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-MDP1 readthrough","termid":"PBO:0060836"}


id: MONDO:0100407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(11;15)(p15;q35). (A cytogenetic abnormality that refers to the translocation of chromosome 11p15 with chromosome 15q35. It results in the formation of NUP98/JARID1A fusion gene. It is associated with the development of acute myeloid leukemia with t(11;15)(p15;q35); NUP98-JARID1A.)","definition_xrefs":["NCIT:C131505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, t(11;15)(p15;q35)","secondary_identifiers":["NCIT:C131504"],"synonyms":[{"name":"AML, t(11;15)(p15;q35)","type":"exact"}],"termid":"MONDO:0100407","xrefs":{"Monarch":{"xref_id":"0100407"}}}


id: PR:Q65ZA6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctf8 gene.","definition_xrefs":["UniProtKB:Q65ZA6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.11c","synonyms":[{"name":"Spom972h-ctf8","type":"exact"}],"termid":"PR:Q65ZA6"}


id: GO:0002810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antifungal peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antifungal peptide production","termid":"GO:0002788"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"},{"relation_name":"regulates","term_name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antifungal peptide biosynthetic process","termid":"GO:0002810"}


id: PBO:0029540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_spheroid_cells_(obsolete_FYPO:0002182)","termid":"PBO:0029540"}


id: PBO:0041019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 2","termid":"PBO:0041019"}


id: MONDO:0010946
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87178],"is_not":false,"summary":null,"term":"MONDO:0010946"}]},"cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the PRKAG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"},{"relation_name":"is_a","term_name":"PRKAG2-related cardiomyopathy","termid":"MONDO:0800484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:331466","OMIM:600858","UMLS:C1833236","MESH:C563436","DOID:0110312"],"synonyms":[{"name":"CMH6","type":"exact"},{"name":"PRKAG2 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic 6","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 6","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 6","type":"exact"},{"name":"cardiomyopathy, hypertrophic 6","type":"exact"},{"name":"hypertrophic cardiomyopathy 6","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in PRKAG2","type":"exact"},{"name":"hypertrophic cardiomyopathy type 6","type":"exact"}],"termid":"MONDO:0010946","terms_by_termid":{"MONDO:0010946":null},"xrefs":{"Monarch":{"xref_id":"0010946"}}}


id: PBO:0066598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q pseudogene 1","termid":"PBO:0066598"}


id: MONDO:0044269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Human personality traits that can be reliably measured by rating scales show a considerable heritable component. One such instrument is the tridimensional personality questionnaire (TPQ), which was designed by {6:Cloninger et al. (1993)} to measure 4 distinct domains of temperament--novelty seeking, harm avoidance, reward dependence, and persistence--that are hypothesized to be based on distinct neurochemical and genetic substrates.nnRisk-taking is a characteristic of behaviors that occur under conditions of uncertainty and involves a tradeoff between beneficial versus detrimental outcomes, perceived or real. Risk-taking may or may not involve conscious evaluation of the probability and magnitude of possible outcomes ({1:Anokhin et al., 2009}).nnSee also harm avoidance (OMIM:607834) and pathologic gambling (OMIM:606349), which may be related.","definition_xrefs":["OMIM:601696"],"gene_count":0,"genotype_count":0,"name":"obsolete novelty seeking personality trait (obsolete MONDO:0044269)","synonyms":[{"name":"novelty seeking personality trait","type":"related"},{"name":"risk-taking behavior","type":"related"}],"termid":"MONDO:0044269","xrefs":{"Monarch":{"xref_id":"0044269"}}}


id: FYPO:0001676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during S phase of a mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to nucleus during mitotic S phase","synonyms":[{"name":"ectopic protein localization to nucleus during mitotic S phase","type":"exact"},{"name":"protein mislocalised to nucleus during S phase during vegetative growth","type":"exact"},{"name":"protein mislocalised to nucleus during mitotic S phase","type":"exact"},{"name":"protein mislocalized to nucleus during S phase during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0001676"}


id: GO:0051722
data:
  {"annotated_genes":["SJAG_01628"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80425],"is_not":false,"summary":null,"term":"GO:0051722"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: C-terminal protein amino acid methyl ester + H2O = protein amino acid + methanol.","definition_xrefs":["PMID:8650216","PMID:10318862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylesterase activity","termid":"GO:0051723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein C-terminal methylesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8856951"],"synonyms":[{"name":"protein phosphatase methylesterase activity","type":"narrow"}],"termid":"GO:0051722","terms_by_termid":{"GO:0051722":null}}


id: GO:0048903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an anterior lateral line neuromast hair cell. Neuromast hair cells are the sensory receptors of the neuromast and are located in a portion of the neuromast called the sensory strip. Each hair cell of the neuromast is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface. There are approximately seven hair cells within each neuromast, with each hair cell innervated by afferent and efferent neurons.","definition_xrefs":["ISBN:0387968377","ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell differentiation","termid":"GO:0048886"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast hair cell differentiation","termid":"GO:0048903"}


id: GO:0061294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between cells of the ureteric bud terminus and the kidney mesenchyme that positively regulates the formation of the mesonephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesonephros development","termid":"GO:0061217"},{"relation_name":"is_a","term_name":"renal vesicle induction","termid":"GO:0072034"},{"relation_name":"positively_regulates","term_name":"mesonephric renal vesicle formation","termid":"GO:0061262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric renal vesicle induction","termid":"GO:0061294"}


id: GO:0009950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the dorsal/ventral axis. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral axis specification","synonyms":[{"name":"dorsal-ventral axis specification","type":"exact"},{"name":"dorsal/ventral axis determination","type":"related"},{"name":"dorsoventral axis specification","type":"exact"}],"termid":"GO:0009950"}


id: PBO:0085005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of genes in multiple nitrogen degradation pathways; expression is regulated by nitrogen levels and by Gln3p; member of the GATA-binding family, forms homodimers and heterodimers with Gzf3p; DAL80 has a paralog, GZF3, that arose from the whole genome duplication","termid":"PBO:0085005"}


id: PBO:0053632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 678","termid":"PBO:0053632"}


id: GO:0120070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any stomach fundus smooth muscle contraction.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stomach fundus smooth muscle contraction","termid":"GO:0120068"},{"relation_name":"is_a","term_name":"negative regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904305"},{"relation_name":"negatively_regulates","term_name":"stomach fundus smooth muscle contraction","termid":"GO:0014825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomach fundus smooth muscle contraction","termid":"GO:0120070"}


id: PBO:0054227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1609","termid":"PBO:0054227"}


id: PBO:0061875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OOEP pseudogene 2","termid":"PBO:0061875"}


id: GO:0098590
data:
  {"annotated_genes":["SJAG_05285","SJAG_04620","SJAG_02351","SJAG_04358","SJAG_04673","SJAG_01738","SJAG_04167","SJAG_04509","SJAG_00368","SJAG_00514","SJAG_01983","SJAG_03536","SJAG_02924","SJAG_02684","SJAG_01437","SJAG_01660","SJAG_01388","SJAG_04001","SJAG_02989","SJAG_01353","SJAG_01794","SJAG_04714","SJAG_02572","SJAG_01114","SJAG_02258","SJAG_04668","SJAG_04637","SJAG_02916","SJAG_02222","SJAG_01888","SJAG_01978","SJAG_01189","SJAG_04905","SJAG_03915","SJAG_01345","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91699,108984,89708,94252,101658,108044,117811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032154"},{"annotations":[89819,93132],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090689"},{"annotations":[108535],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106186"},{"annotations":[89970,100875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070250"},{"annotations":[98257,112165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070867"},{"annotations":[94570,89972,117818,95336,94351,97405,102586,111407,104931,103702,117470,116380,110404,91706,89717,94258,119221,90110,98935,112838,114331,98887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031520"},{"annotations":[79855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902929"},{"annotations":[91176,90278,105174,120559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"A membrane that is a (regional) part of the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00514":null,"SJAG_01114":null,"SJAG_01189":null,"SJAG_01345":null,"SJAG_01353":null,"SJAG_01388":null,"SJAG_01437":null,"SJAG_01660":null,"SJAG_01738":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_02222":null,"SJAG_02258":null,"SJAG_02351":null,"SJAG_02572":null,"SJAG_02684":null,"SJAG_02916":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03536":null,"SJAG_03608":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04167":null,"SJAG_04358":null,"SJAG_04509":null,"SJAG_04620":null,"SJAG_04637":null,"SJAG_04668":null,"SJAG_04673":null,"SJAG_04714":null,"SJAG_04905":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane region","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"region of plasma membrane","type":"exact"}],"termid":"GO:0098590","terms_by_termid":{"GO:0031520":null,"GO:0032154":null,"GO:0044853":null,"GO:0070250":null,"GO:0070867":null,"GO:0090689":null,"GO:0106186":null,"GO:1902929":null}}


id: PBO:0085503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the H/ACA snoRNP pseudouridylase complex; involved in the modification and cleavage of the 18S pre-rRNA","termid":"PBO:0085503"}


id: MONDO:0002569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal distention of the stomach due to accumulation of gastric contents that may reach 10 to 15 liters. Gastric dilatation may be the result of gastric outlet obstruction; ileus; gastroparesis; or denervation.","definition_xrefs":["MESH:D013271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric dilatation","secondary_identifiers":["UMLS:C0038353","DOID:3229","MEDGEN:11602"],"synonyms":[{"name":"stomach dilatation","type":"exact"}],"termid":"MONDO:0002569","xrefs":{"Monarch":{"xref_id":"0002569"}}}


id: PBO:0005278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Spc7","termid":"PBO:0005278"}


id: GO:0150060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular amylin, or another ligand, combining with an amylin receptor 2 (AMY2), a G protein-coupled receptor complex, on the surface of the target cell. The AMY2 signaling pathway can also be initiated by adrenomedullin (AM/ADM).","definition_xrefs":["PMID:22500019","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor signaling pathway","termid":"GO:0097647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"amylin receptor 2 signaling pathway","synonyms":[{"name":"AMY2 signaling pathway","type":"exact"}],"termid":"GO:0150060"}


id: GO:0046144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving D-alanine and related amino acids.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete D-alanine family amino acid metabolic process (obsolete GO:0046144)","synonyms":[{"name":"D-alanine family amino acid metabolism","type":"exact"}],"termid":"GO:0046144"}


id: PBO:0078068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 58 (non-functional)","termid":"PBO:0078068"}


id: PBO:0079927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URGCP-MRPS24 readthrough","termid":"PBO:0079927"}


id: MONDO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial adenomatous polyposis (obsolete MONDO:0000199)","termid":"MONDO:0000199","xrefs":{"Monarch":{"xref_id":"0000199"}}}


id: PBO:0047918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(10)(q21)","termid":"PBO:0047918"}


id: PBO:0071521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 24","termid":"PBO:0071521"}


id: PATO:0001059
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001059 relative efficiency (obsolete PATO:0001059)","termid":"PATO:0001059"}


id: MONDO:0020329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete classic Hodgkin lymphoma, lymphocyte-rich type (obsolete MONDO:0020329)","termid":"MONDO:0020329","xrefs":{"Monarch":{"xref_id":"0020329"}}}


id: PBO:0027187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_organization","termid":"PBO:0027187"}


id: MONDO:1012354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy, non-human animal","termid":"MONDO:1011872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, dog","secondary_identifiers":["OMIA:001292-9615"],"termid":"MONDO:1012354","xrefs":{"Monarch":{"xref_id":"1012354"}}}


id: GO:0051572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K4 methylation (obsolete GO:0051572)","synonyms":[{"name":"down regulation of histone H3-K4 methylation","type":"exact"},{"name":"down-regulation of histone H3-K4 methylation","type":"exact"},{"name":"downregulation of histone H3-K4 methylation","type":"exact"},{"name":"inhibition of histone H3-K4 methylation","type":"narrow"}],"termid":"GO:0051572"}


id: GO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the venous blood vessel over time from its initial formation to the mature structure. Venous blood vessels carry blood back to the heart after the capillary bed.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous blood vessel development","termid":"GO:0060841"}


id: MONDO:0002367
data:
  {"annotated_genes":["SJAG_03677","SJAG_00440","SJAG_03787","SJAG_01144","SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[87993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[88612,88611,88613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"}]},"cv_name":"mondo","definition":"Primary or metastatic malignant neoplasm involving the kidney.","definition_xrefs":["NCIT:C7548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant urinary system neoplasm","termid":"MONDO:0006295"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_01144":null,"SJAG_02231":null,"SJAG_03677":null,"SJAG_03787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"kidney cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:149263","ICD9:189.0","UMLS:C0740457","SCTID:363518003","DOID:263","MESH:D007680"],"synonyms":[{"name":"cancer of kidney","type":"exact"},{"name":"kidney cancer","type":"exact"},{"name":"malignant kidney neoplasm","type":"exact"},{"name":"malignant kidney tumor","type":"exact"},{"name":"malignant kidney tumour","type":"exact"},{"name":"malignant neoplasm of kidney","type":"exact"},{"name":"malignant neoplasm of kidney except pelvis","type":"exact"},{"name":"malignant neoplasm of the kidney","type":"exact"},{"name":"malignant renal neoplasm","type":"exact"},{"name":"malignant renal tumor","type":"exact"},{"name":"malignant renal tumour","type":"exact"},{"name":"malignant tumor of kidney","type":"exact"},{"name":"malignant tumor of the kidney","type":"exact"},{"name":"malignant tumour of kidney","type":"exact"},{"name":"malignant tumour of the kidney","type":"exact"}],"termid":"MONDO:0002367","terms_by_termid":{"MONDO:0003789":null,"MONDO:0007763":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002367"}}}


id: GO:0140594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Stops, prevents or reduces the activity of xyloglucan-specific endo-beta-1,4-glucanase.","definition_xrefs":["PMID:28082413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0140678","GO:0098772","GO:0004857","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"xyloglucan-specific endo-beta-1,4-glucanase inhibitor activity","termid":"GO:0140594"}


id: MONDO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an enduring pattern of avoidance of social situations and interpersonal contact due to overwhelming feelings of social inadequacy and a hypersensitivity to negative evaluation or rejection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"personality disorder","termid":"MONDO:0002028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avoidant personality disorder","secondary_identifiers":["SCTID:231528008","ICD9:301.82","MEDGEN:13985","DOID:1509","UMLS:C0004444","icd11.foundation:429615620","NCIT:C92636","ICD10CM:F60.6"],"synonyms":[{"name":"anxious personality disorder","type":"exact"}],"termid":"MONDO:0002027","xrefs":{"Monarch":{"xref_id":"0002027"}}}


id: PBO:0056937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-2","termid":"PBO:0056937"}


id: GO:0031679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADH + H+ + plastoquinone = NAD+ + plastoquinol.","definition_xrefs":["EC:1.6.99.6","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete NADH dehydrogenase (plastoquinone) activity (obsolete GO:0031679)","synonyms":[{"name":"NADH:plastoquinone reductase activity","type":"exact"}],"termid":"GO:0031679"}


id: PBO:0048421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger domain containing 2A","termid":"PBO:0048421"}


id: PBO:0070696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 5","termid":"PBO:0070696"}


id: PBO:0059352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S16","termid":"PBO:0059352"}


id: MONDO:0021368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the major salivary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of salivary gland","termid":"MONDO:0021357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of major salivary gland","secondary_identifiers":["UMLS:C0345599","MEDGEN:83383","NCIT:C4407","SCTID:126787005"],"synonyms":[{"name":"major salivary gland neoplasm","type":"exact"},{"name":"major salivary gland neoplasm (disease)","type":"exact"},{"name":"major salivary gland tumor","type":"exact"},{"name":"major salivary gland tumour","type":"exact"},{"name":"neoplasm of major salivary gland","type":"exact"},{"name":"neoplasm of the Major salivary gland","type":"exact"},{"name":"tumor of Major salivary gland","type":"exact"},{"name":"tumor of major salivary gland","type":"exact"},{"name":"tumor of the Major salivary gland","type":"exact"},{"name":"tumour of Major salivary gland","type":"exact"},{"name":"tumour of major salivary gland","type":"exact"},{"name":"tumour of the Major salivary gland","type":"exact"}],"termid":"MONDO:0021368","xrefs":{"Monarch":{"xref_id":"0021368"}}}


id: MONDO:0026141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic urticaria (obsolete MONDO:0026141)","secondary_identifiers":["Orphanet:182734"],"termid":"MONDO:0026141","xrefs":{"Monarch":{"xref_id":"0026141"}}}


id: PBO:0079931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase","termid":"PBO:0079931"}


id: PBO:0083043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxycytidine monophosphate (dCMP) deaminase; involved in dUMP and dTMP biosynthesis; expression is NOT cell cycle regulated","termid":"PBO:0083043"}


id: PBO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen15 (predicted)","termid":"PBO:0002033"}


id: PBO:0055345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2773","termid":"PBO:0055345"}


id: PBO:0028185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0028185"}


id: GO:1990349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of substances between cells via gap junctions. A gap junction is a fine cytoplasmic channel, found in animal cells, that connects the cytoplasm of one cell to that of an adjacent cell, allowing ions and other molecules to pass freely between the two cells.","definition_xrefs":["Wikipedia:Gap_junction","GOC:hjd","PMID:14506308","PMID:23261543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular transport","termid":"GO:0010496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"gap junction-mediated intercellular transport","termid":"GO:1990349"}


id: PATO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of temperature which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant temperature","termid":"PATO:0001314"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased variability of temperature","synonyms":[{"name":"high variability of temperature","type":"exact"}],"termid":"PATO:0001308"}


id: PBO:0002975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human WW domain binding protein-2 ortholog","termid":"PBO:0002975"}


id: MONDO:0024877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a clitoris.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clitoris neoplasm","secondary_identifiers":["ICD9:239.5","SCTID:126925009","MEDGEN:688068","UMLS:C1263793"],"synonyms":[{"name":"clitoral neoplasm","type":"exact"},{"name":"clitoris tumor","type":"exact"},{"name":"clitoris tumour","type":"exact"},{"name":"neoplasm of clitoris","type":"exact"},{"name":"tumor of clitoris","type":"exact"},{"name":"tumour of clitoris","type":"exact"}],"termid":"MONDO:0024877","xrefs":{"Monarch":{"xref_id":"0024877"}}}


id: PBO:0091629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenazine biosynthesis PhzF protein family","termid":"PBO:0091629"}


id: PBO:0005450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Bub1","termid":"PBO:0005450"}


id: GO:0050935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an iridophore. Iridophores are pigment cells derived from the neural crest. They contain guanidine or other purine crystals deposited in stacks called reflecting platets or iridisomes. This gives them a silver, gold, or iridescent appearance.","definition_xrefs":["GOC:mh","PMID:11858836","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iridophore differentiation","synonyms":[{"name":"iridophore cell differentiation","type":"exact"}],"termid":"GO:0050935"}


id: MOD:02021
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a timnodonoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"timnodonoylated residue","termid":"MOD:02021"}


id: PBO:0046692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine kinase 1","termid":"PBO:0046692"}


id: PBO:0052541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 14","termid":"PBO:0052541"}


id: MONDO:0017725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Tay-Sachs disease","termid":"MONDO:0010100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005328","MONDO:0005244","MONDO:0002561","MONDO:0005066","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Tay-Sachs disease, b variant, juvenile form","secondary_identifiers":["SCTID:238022009","Orphanet:309185","GARD:21325","UMLS:C5925030","MEDGEN:1863740"],"synonyms":[{"name":"GM2 gangliosidosis, B variant, juvenile form","type":"exact"},{"name":"hexosaminidase A deficiency, juvenile form","type":"exact"}],"termid":"MONDO:0017725","xrefs":{"Monarch":{"xref_id":"0017725"}}}


id: GO:1902196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isovaleryl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:11231285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"isovaleryl-CoA(4-) metabolic process","termid":"GO:1902195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006629","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"isovaleryl-CoA(4-) catabolic process","synonyms":[{"name":"isovaleryl-CoA(4-) breakdown","type":"exact"},{"name":"isovaleryl-CoA(4-) catabolism","type":"exact"},{"name":"isovaleryl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902196"}


id: PBO:0071697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 3","termid":"PBO:0071697"}


id: PR:Q9C0Y9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Y9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.03","synonyms":[{"name":"AUH 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAPB24D3.03","type":"exact"},{"name":"agmatine ureohydrolase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C0Y9"}


id: MONDO:0005804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally high level of prolactin in the blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpituitarism","termid":"MONDO:0006793"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperprolactinemia","secondary_identifiers":["HP:0000870","ICD10CM:E22.1","MESH:D006966","EFO:0007319","NANDO:2100115","UMLS:C0020514","ICD9:253.1","MEDGEN:5698","NANDO:2200322","SCTID:237662005"],"synonyms":[{"name":"hyperprolactinaemia","type":"exact"},{"name":"hyperprolactinemia","type":"exact"},{"name":"hyperprolactinemia (disease)","type":"exact"},{"name":"hyperprolactinemias","type":"related"},{"name":"hypersecretion syndrome, prolactin","type":"related"},{"name":"inappropriate prolactin secretion","type":"related"},{"name":"inappropriate prolactin secretion syndrome","type":"related"},{"name":"inappropriate secretion prolactin","type":"related"},{"name":"prolactin hypersecretion syndrome","type":"related"},{"name":"prolactin secretion, inappropriate","type":"related"},{"name":"prolactin, inappropriate secretion","type":"related"},{"name":"secretion prolactin, inappropriate","type":"related"},{"name":"secretion, inappropriate prolactin","type":"related"},{"name":"syndrome, prolactin hypersecretion","type":"related"}],"termid":"MONDO:0005804","xrefs":{"Monarch":{"xref_id":"0005804"}}}


id: GO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"positively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045422"],"synonyms":[{"name":"activation of connective tissue growth factor production","type":"narrow"},{"name":"positive regulation of CCN2 production","type":"exact"},{"name":"positive regulation of CTGF production","type":"exact"},{"name":"positive regulation of Fisp12 production","type":"exact"},{"name":"positive regulation of Hcs24 production","type":"exact"},{"name":"positive regulation of IGFBP8 production","type":"exact"},{"name":"positive regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"positive regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"},{"name":"stimulation of connective tissue growth factor production","type":"narrow"},{"name":"up regulation of connective tissue growth factor production","type":"exact"},{"name":"up-regulation of connective tissue growth factor production","type":"exact"},{"name":"upregulation of connective tissue growth factor production","type":"exact"}],"termid":"GO:0032723"}


id: GO:0007418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate.","definition_xrefs":["PMID:12075342","GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral midline development","termid":"GO:0007418"}


id: PBO:0070997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 21","termid":"PBO:0070997"}


id: GO:0044587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellopentaose, an oligosaccharide consisting of four glucose residues resulting from hydrolysis of cellulose.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cellopentaose binding","termid":"GO:0044587"}


id: FYPO:0002483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, has an abnormally low volume, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"inviable tapered vegetative cell","termid":"FYPO:0002111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable small tapered vegetative cell","synonyms":[{"name":"inviable small bottle-shaped vegetative cell","type":"exact"},{"name":"inviable small bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable small bottle/skittle vegetative cell","type":"exact"},{"name":"inviable small skittle-shaped vegetative cell","type":"exact"},{"name":"inviable small tapered cell during vegetative growth","type":"exact"},{"name":"lethal; small tapered vegetative cell","type":"exact"}],"termid":"FYPO:0002483"}


id: PBO:0088229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type","termid":"PBO:0088229"}


id: PBO:0049440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 17","termid":"PBO:0049440"}


id: GO:0048916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line over time, from its formation to the mature structure. The posterior lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the body and trunk of all fishes and most amphibians. The posterior lateral line develops from cranial ectodermal placodes situated behind the ear.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line development","termid":"GO:0048882"},{"relation_name":"part_of","term_name":"posterior lateral line system development","termid":"GO:0048915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line development","synonyms":[{"name":"PLL development","type":"exact"}],"termid":"GO:0048916"}


id: PBO:0054450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1847","termid":"PBO:0054450"}


id: PBO:0064225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCE1 antisense RNA 2","termid":"PBO:0064225"}


id: GO:0005260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables passage of a chloride ion through a transmembrane channel that opens when ATP is bound by the channel complex or one of its constituent parts on the intracellular side of the plasma membrane.","definition_xrefs":["PMID:24727426","PMID:9922375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"intracellularly ATP-gated ion channel activity","termid":"GO:0099142"},{"relation_name":"is_a","term_name":"polypeptide conformation or assembly isomerase activity","termid":"GO:0120544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0005215","GO:0003824","GO:0003674","GO:0016853","GO:0022857"],"is_obsolete":false,"name":"intracellularly ATP-gated chloride channel activity","secondary_identifiers":["TC:3.A.1.202.1","GO:0005224","MetaCyc:3.6.3.49-RXN","Wikipedia:Cystic_fibrosis_transmembrane_conductance_regulator","EC:5.6.1.6"],"synonyms":[{"name":"CFTR","type":"exact"},{"name":"channel-conductance-controlling ATPase activity","type":"related"},{"name":"cystic fibrosis transmembrane conductance regulator","type":"narrow"}],"termid":"GO:0005260"}


id: PATO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's spatial positioning with respect to an additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"has_part","term_name":"orientation","termid":"PATO:0000133"},{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alignment","termid":"PATO:0001652"}


id: GO:0008724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the ATP-independent breakage of DNA, followed by passage and rejoining. It also catalyzes the relaxation of supercoiled DNA, and the decatenation and unknotting of DNA in vivo.","definition_xrefs":["PMID:11274059","EC:5.99.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA topoisomerase IV activity (obsolete GO:0008724)","synonyms":[{"name":"DNA topoisomerase IV activity","type":"exact"}],"termid":"GO:0008724"}


id: PBO:0060093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 40","termid":"PBO:0060093"}


id: GO:0021727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the intermediate reticular formation over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GOC:curators","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate reticular formation development","synonyms":[{"name":"intermediate reticular nucleus development","type":"exact"}],"termid":"GO:0021727"}


id: MONDO:0041959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"fibrosis of bile duct","secondary_identifiers":["UMLS:C0520571","MEDGEN:636068","SCTID:48124008"],"synonyms":[{"name":"biliary duct fibrosis","type":"related"},{"name":"biliary sclerosis","type":"related"},{"name":"fibrosis of bile duct","type":"exact"}],"termid":"MONDO:0041959","xrefs":{"Monarch":{"xref_id":"0041959"}}}


id: MONDO:0007802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias","termid":"MONDO:0005345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias 3, autosomal","secondary_identifiers":["GARD:18184","MEDGEN:382538","MESH:C567191","UMLS:C2675154","OMIM:146450"],"synonyms":[{"name":"HYSP3","type":"related"},{"name":"hypospadias 3, autosomal","type":"exact"},{"name":"hypospadias 3, autosomal, multifactorial","type":"exact"}],"termid":"MONDO:0007802","xrefs":{"Monarch":{"xref_id":"0007802"}}}


id: MONDO:0016846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal 22q11.2 microduplication syndrome is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome 22, with a highly variable phenotype principally characterized by developmental delay, intellectual disability, hypotonia, growth retardation, velopharyngeal insufficiency, mild craniofacial dysmorphism (microcephaly, tall/broad forehead, small downslating palpebral fissures, hooded eyelids, flat nasal bridge, low posterior hairline) and digital anomalies. Congenital heart malformations, visual and hearing impairment, urogenital abnormalities, behavourial problems and seizures have also been reported.","definition_xrefs":["Orphanet:261337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 22q11.2 microduplication syndrome","termid":"MONDO:0012020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal 22q11.2 microduplication syndrome","secondary_identifiers":["UMLS:C4706942","SCTID:764524005","GARD:20780","MEDGEN:1637660"],"synonyms":[{"name":"distal dup(22)(q11.2)","type":"exact"},{"name":"distal trisomy 22q11.2","type":"exact"}],"termid":"MONDO:0016846","xrefs":{"Monarch":{"xref_id":"0016846"}}}


id: GO:0016494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a C-X-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif.","definition_xrefs":["PMID:8662823","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor activity","termid":"GO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-X-C chemokine receptor activity","termid":"GO:0016494"}


id: MONDO:0005485
data:
  {"annotated_genes":["SJAG_03712","SJAG_01466"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89174,89173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005090"}]},"cv_name":"mondo","definition":"An abnormal condition of the mind that involves a loss of contact with reality. People experiencing psychosis may exhibit personality changes and thought disorder. Depending on its severity, this may be accompanied by unusual or bizarre behavior, as well as difficulty with social interaction and impairment in carrying out daily life activities.","definition_xrefs":["Wikipedia:Psychosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cognitive disorder","termid":"MONDO:0002039"},{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"psychotic disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2468","ICD9:298.9","ICD9:298.8","MEDGEN:19568","HP:0000709","NCIT:C78576","UMLS:C0033975","EFO:0005407","SCTID:69322001"],"synonyms":[{"name":"mental or behavioral disorder","type":"broad"},{"name":"mental or behavioural disorder","type":"broad"},{"name":"psychosis","type":"exact"}],"termid":"MONDO:0005485","terms_by_termid":{"MONDO:0005090":null},"xrefs":{"Monarch":{"xref_id":"0005485"}}}


id: GO:0004713
data:
  {"annotated_genes":["SJAG_04980","SJAG_00402","SJAG_01181","SJAG_03854","SJAG_02104","SJAG_04457","SJAG_00718","SJAG_00996","SJAG_04280"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72446,72955,80398,91499,94026,95754,104860,112162,112963],"is_not":false,"summary":null,"term":"GO:0004713"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.","definition_xrefs":["RHEA:10596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00402":null,"SJAG_00718":null,"SJAG_00996":null,"SJAG_01181":null,"SJAG_02104":null,"SJAG_03854":null,"SJAG_04280":null,"SJAG_04457":null,"SJAG_04980":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0004672","GO:0140096","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein tyrosine kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9700181","Reactome:R-HSA-983707","Reactome:R-HSA-5218640","Reactome:R-HSA-399947","Reactome:R-HSA-8848726","Reactome:R-HSA-9027425","Reactome:R-HSA-6790087","Reactome:R-HSA-5654149","Reactome:R-HSA-9703437","Reactome:R-HSA-389159","Reactome:R-HSA-873918","Reactome:R-HSA-1250315","Reactome:R-HSA-186786","Reactome:R-HSA-9604767","Reactome:R-HSA-391866","Reactome:R-HSA-182969","Reactome:R-HSA-1839112","Reactome:R-HSA-9006332","Reactome:R-HSA-1472121","Reactome:R-HSA-873922","Reactome:R-HSA-8848005","Reactome:R-HSA-418163","Reactome:R-HSA-5654578","Reactome:R-HSA-5654587","Reactome:R-HSA-879909","Reactome:R-HSA-1982066","Reactome:R-HSA-9664278","Reactome:R-HSA-9032532","Reactome:R-HSA-389086","Reactome:R-HSA-452100","Reactome:R-HSA-177937","Reactome:R-HSA-8874078","Reactome:R-HSA-9712085","Reactome:R-HSA-9842666","Reactome:R-HSA-9606163","Reactome:R-HSA-9732738","Reactome:R-HSA-3928648","Reactome:R-HSA-1839067","Reactome:R-HSA-5218642","Reactome:R-HSA-3928594","Reactome:R-HSA-9606162","Reactome:R-HSA-9842648","Reactome:R-HSA-434836","Reactome:R-HSA-210291","Reactome:R-HSA-8848124","Reactome:R-HSA-9664261","Reactome:R-HSA-399934","Reactome:R-HSA-452122","Reactome:R-HSA-2029459","Reactome:R-HSA-5654655","Reactome:R-HSA-9698003","Reactome:R-HSA-1247844","Reactome:R-HSA-4420121","Reactome:R-HSA-2671829","Reactome:R-HSA-2029449","Reactome:R-HSA-5654605","Reactome:R-HSA-9673756","Reactome:R-HSA-8848818","Reactome:R-HSA-9709918","Reactome:R-HSA-174164","Reactome:R-HSA-432129","Reactome:R-HSA-8851933","Reactome:R-HSA-9027272","Reactome:R-HSA-2671742","Reactome:R-HSA-8964252","Reactome:R-HSA-9665704","Reactome:R-HSA-2038944","Reactome:R-HSA-4420117","Reactome:R-HSA-2730884","Reactome:R-HSA-5654151","Reactome:R-HSA-8874080","Reactome:R-HSA-3215391","Reactome:R-HSA-2201322","Reactome:R-HSA-8937807","Reactome:R-HSA-202165","Reactome:R-HSA-202216","Reactome:R-HSA-373747","Reactome:R-HSA-5654408","Reactome:R-HSA-9672175","GO:0004718","Reactome:R-HSA-1433454","Reactome:R-HSA-1433542","Reactome:R-HSA-2454239","Reactome:R-HSA-2586555","Reactome:R-HSA-8849102","Reactome:R-HSA-9665709","EC:2.7.10.-","Reactome:R-HSA-9680248","Reactome:R-HSA-9700186","Reactome:R-HSA-9673761","Reactome:R-HSA-3928583","Reactome:R-HSA-9698005","Reactome:R-HSA-2029268","Reactome:R-HSA-5218851","Reactome:R-HSA-6784006","Reactome:R-HSA-9703438","Reactome:R-HSA-9024726","Reactome:R-HSA-445084","Reactome:R-HSA-2038387","Reactome:R-HSA-429441","Reactome:R-HSA-5624486","Reactome:R-HSA-8849463","Reactome:R-HSA-8956659","Reactome:R-HSA-9021609","Reactome:R-HSA-190388","Reactome:R-HSA-2033488","Reactome:R-HSA-5357429","Reactome:R-HSA-9672173","Reactome:R-HSA-9700171","Reactome:R-HSA-5621370","Reactome:R-HSA-391871","Reactome:R-HSA-8848758","Reactome:R-HSA-9700175","Reactome:R-HSA-5654631","Reactome:R-HSA-873924","Reactome:R-HSA-9665389","Reactome:R-HSA-428888","Reactome:R-HSA-9712082","Reactome:R-HSA-190408","Reactome:R-HSA-9026890","Reactome:R-HSA-8848606","Reactome:R-HSA-9670418","Reactome:R-HSA-171011","Reactome:R-HSA-9613023","Reactome:R-HSA-9733323","Reactome:R-HSA-9026510","Reactome:R-HSA-1248655","Reactome:R-HSA-9860500","MetaCyc:2.7.10.1-RXN","Reactome:R-HSA-170156","Reactome:R-HSA-9032854","Reactome:R-HSA-9666425","Reactome:R-HSA-9634390","Reactome:R-HSA-2424484","Reactome:R-HSA-5654397","Reactome:R-HSA-3928604","Reactome:R-HSA-5654575","Reactome:R-HSA-389083","Reactome:R-HSA-8855237","Reactome:R-HSA-1671691","Reactome:R-HSA-2404199","Reactome:R-HSA-5654418","Reactome:R-HSA-8964242","Reactome:R-HSA-9700164","Reactome:R-HSA-354124","Reactome:R-HSA-5683930","Reactome:R-HSA-2029989","Reactome:R-HSA-4420206","Reactome:R-HSA-2033485","Reactome:R-HSA-377640","Reactome:R-HSA-190413","Reactome:R-HSA-443817","Reactome:R-HSA-6806974","Reactome:R-HSA-5654545","Reactome:R-HSA-9011241","Reactome:R-HSA-8849032","Reactome:R-HSA-170991","Reactome:R-HSA-2671850","Reactome:R-HSA-190326","Reactome:R-HSA-202307","Reactome:R-HSA-2730833","Reactome:R-HSA-5218820","Reactome:R-HSA-114600","Reactome:R-HSA-2012082","Reactome:R-HSA-5655270","Reactome:R-HSA-5686587","Reactome:R-HSA-2023455","Reactome:R-HSA-5690702","Reactome:R-HSA-8857555","Reactome:R-HSA-202291","Reactome:R-HSA-5637796","Reactome:R-HSA-9026502","Reactome:R-HSA-9026579","Reactome:R-HSA-879925","Reactome:R-HSA-2428926","Reactome:R-HSA-3928610","Reactome:R-HSA-1433488","Reactome:R-HSA-8848975","Reactome:R-HSA-9028728","Reactome:R-HSA-9669890","Reactome:R-HSA-9669911","Reactome:R-HSA-2730851","Reactome:R-HSA-9700168","Reactome:R-HSA-9842651","Reactome:R-HSA-5655341","Reactome:R-HSA-2029453","Reactome:R-HSA-419646","Reactome:R-HSA-2730888","Reactome:R-HSA-445076","Reactome:R-HSA-9029155","Reactome:R-HSA-445085","Reactome:R-HSA-68954","Reactome:R-HSA-8857925","Reactome:R-HSA-9665032","Reactome:R-HSA-2130194","Reactome:R-HSA-202233","Reactome:R-HSA-2023460","Reactome:R-HSA-8848077","Reactome:R-HSA-9706344","Reactome:R-HSA-983709","Reactome:R-HSA-8851890","Reactome:R-HSA-1225952","Reactome:R-HSA-1963582","Reactome:R-HSA-508282","Reactome:R-HSA-5218828","Reactome:R-HSA-9034875","Reactome:R-HSA-8853313","Reactome:R-HSA-909730","Reactome:R-HSA-9665411","Reactome:R-HSA-9624014","Reactome:R-HSA-2730860","Reactome:R-HSA-1250195","Reactome:R-HSA-1225960","Reactome:R-HSA-212710","Reactome:R-HSA-9865196","Reactome:R-HSA-451942","Reactome:R-HSA-5655284","Reactome:R-HSA-9665705","Reactome:R-HSA-1307963","Reactome:R-HSA-1250348","Reactome:R-HSA-9012650","Reactome:R-HSA-2730843","Reactome:R-HSA-1251922","Reactome:R-HSA-9603420","Reactome:R-HSA-5654582","Reactome:R-HSA-9695834","Reactome:R-HSA-3928580","Reactome:R-HSA-202245","Reactome:R-HSA-5607745","Reactome:R-HSA-9032601","Reactome:R-HSA-9842667","Reactome:R-HSA-9018572","Reactome:R-HSA-1839110","Reactome:R-HSA-1295540","Reactome:R-HSA-2396594","Reactome:R-HSA-1470009","Reactome:R-HSA-9699578","Reactome:R-HSA-9664588","Reactome:R-HSA-9860759","Reactome:R-HSA-2033490","Reactome:R-HSA-112333","Reactome:R-HSA-2404193","Reactome:R-HSA-391865","Reactome:R-HSA-3928627","Reactome:R-HSA-429449","Reactome:R-HSA-2424486","Reactome:R-HSA-5218812","Reactome:R-HSA-5654407","Reactome:R-HSA-5654428","Reactome:R-HSA-5655243","Reactome:R-HSA-8875817","Reactome:R-HSA-2586553","Reactome:R-HSA-5637795","Reactome:R-HSA-8983872","Reactome:R-HSA-9029151","Reactome:R-HSA-190429","Reactome:R-HSA-9037040","Reactome:R-HSA-8876230","Reactome:R-HSA-909732","Reactome:R-HSA-9670412","Reactome:R-HSA-9700647","Reactome:R-HSA-982807","Reactome:R-HSA-909729","Reactome:R-HSA-5621363","Reactome:R-HSA-2033486","Reactome:R-HSA-201521","Reactome:R-HSA-1963586","Reactome:R-HSA-5621355","Reactome:R-HSA-2730862","Reactome:R-HSA-909718","Reactome:R-HSA-9027273","Reactome:R-HSA-9606159","Reactome:R-HSA-9701488","Reactome:R-HSA-5218809","Reactome:R-HSA-354073","Reactome:R-HSA-9664976","Reactome:R-HSA-202174","Reactome:R-HSA-374701","Reactome:R-HSA-5655278","Reactome:R-HSA-873919","Reactome:R-HSA-8847977","Reactome:R-HSA-5654147","Reactome:R-HSA-9034714","Reactome:R-HSA-9712086","Reactome:R-HSA-1295609","Reactome:R-HSA-5655301","Reactome:R-HSA-177934","Reactome:R-HSA-190427","Reactome:R-HSA-5654628","Reactome:R-HSA-8937728","Reactome:R-HSA-8875451","Reactome:R-HSA-388831","Reactome:R-HSA-190385","Reactome:R-HSA-1433418","Reactome:R-HSA-9612085","Reactome:R-HSA-191062","Reactome:R-HSA-389762","Reactome:R-HSA-912629","Reactome:R-HSA-5218806","Reactome:R-HSA-9674567","Reactome:R-HSA-9706350","Reactome:R-HSA-9726848","Reactome:R-HSA-9733314","Reactome:R-HSA-2730886","Reactome:R-HSA-4093332","Reactome:R-HSA-5218830","Reactome:R-HSA-1248694","Reactome:R-HSA-399946","Reactome:R-HSA-1169421","Reactome:R-HSA-9034814","Reactome:R-HSA-8857583","Reactome:R-HSA-391156","Reactome:R-HSA-5654653","Reactome:R-HSA-1963581","Reactome:R-HSA-2395439","Reactome:R-HSA-2395412","Reactome:R-HSA-372693","Reactome:R-HSA-1839065","Reactome:R-HSA-2197698","Reactome:R-HSA-389354","Reactome:R-HSA-9026464","Reactome:R-HSA-9032426","Reactome:R-HSA-418872","Reactome:R-HSA-9612996","Reactome:R-HSA-210872","Reactome:R-HSA-9712087","Reactome:R-HSA-9861469","Reactome:R-HSA-2424487","Reactome:R-HSA-6784319","Reactome:R-HSA-879907","Reactome:R-HSA-202248","Reactome:R-HSA-8848436","Reactome:R-HSA-2012073","Reactome:R-HSA-388833","Reactome:R-HSA-69195","Reactome:R-HSA-1168394","Reactome:R-HSA-8937844","Reactome:R-HSA-2730858","Reactome:R-HSA-2730882","Reactome:R-HSA-9033284","Reactome:R-HSA-1524186","Reactome:R-HSA-5654607","Reactome:R-HSA-9625487","Reactome:R-HSA-2454208","Reactome:R-HSA-9006323","Reactome:R-HSA-202168","Reactome:R-HSA-1888198","Reactome:R-HSA-8948143","Reactome:R-HSA-9700193","Reactome:R-HSA-9762209","Reactome:R-HSA-9674558","Reactome:R-HSA-9831136","Reactome:R-HSA-9841924","Reactome:R-HSA-452097","Reactome:R-HSA-5607750","Reactome:R-HSA-8857577","Reactome:R-HSA-983703","Reactome:R-HSA-191636","Reactome:R-HSA-373750","Reactome:R-HSA-1433506","Reactome:R-HSA-5654634","Reactome:R-HSA-8848776","Reactome:R-HSA-8848873","Reactome:R-HSA-5655268","Reactome:R-HSA-8849042","Reactome:R-HSA-8942607","Reactome:R-HSA-8876948","Reactome:R-HSA-8849068","Reactome:R-HSA-909726","Reactome:R-HSA-4420128","Reactome:R-HSA-8853325","Reactome:R-HSA-8867041","Reactome:R-HSA-205289","Reactome:R-HSA-183058","Reactome:R-HSA-418859","Reactome:R-HSA-8876246","Reactome:R-HSA-9664275","Reactome:R-HSA-445091","Reactome:R-HSA-170070","Reactome:R-HSA-1839098","Reactome:R-HSA-380780","Reactome:R-HSA-3928578","Reactome:R-HSA-8853309","Reactome:R-HSA-2395801","Reactome:R-HSA-2012087","Reactome:R-HSA-2029984","Reactome:R-HSA-5654222","Reactome:R-HSA-8874082"],"synonyms":[{"name":"protein-tyrosine kinase activity","type":"exact"}],"termid":"GO:0004713","terms_by_termid":{"GO:0004713":null}}


id: PBO:0028233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_homocysteine_level","termid":"PBO:0028233"}


id: MONDO:0034217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete resistance to thyroid hormone due to a mutation in thyroid hormone receptor beta (obsolete MONDO:0034217)","secondary_identifiers":["Orphanet:566243"],"termid":"MONDO:0034217","xrefs":{"Monarch":{"xref_id":"0034217"}}}


id: MONDO:0021804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tuberculosis caused by the infection of Mycobacterium tuberculosis in patients with silicosis (that is caused by inhalation of silica dust particles). The risk of a patient with silicosis developing pulmonary tuberculosis and extra-pulmonary tuberculosis is higher than in healthy population.","definition_xrefs":["PMID:26175823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silicosis","termid":"MONDO:0005960"},{"relation_name":"is_a","term_name":"pulmonary tuberculosis","termid":"MONDO:0006052"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silicotuberculosis","secondary_identifiers":["MEDGEN:11426","ICD9:502","SCTID:233763009","UMLS:C0037118","MESH:D012830"],"synonyms":[{"name":"silicotuberculoses","type":"exact"},{"name":"silicotuberculosis","type":"exact"}],"termid":"MONDO:0021804","xrefs":{"Monarch":{"xref_id":"0021804"}}}


id: GO:0060690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquire specialized structural and/or functional features of an epithelial cell of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in salivary gland development","termid":"GO:0060690"}


id: GO:1900631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tridecane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tridecane metabolic process","synonyms":[{"name":"tridecane metabolism","type":"exact"}],"termid":"GO:1900631"}


id: GO:0008275
data:
  {"annotated_genes":["SJAG_01215","SJAG_02609","SJAG_07018","SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102892,110808,111568,112551],"is_not":false,"summary":null,"term":"GO:0008275"}]},"cv_name":"cellular_component","definition":"A complex usually comprising two gamma-tubulin molecules and two conserved non-tubulin proteins. Some gamma-tubulin small complexes are thought to be the repeating unit making up the core of the gamma-tubulin ring complex.","definition_xrefs":["PMID:12134075","PMID:11297925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex","termid":"GO:0000930"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"gamma-tubulin small complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000928","GO:0061495","GO:0000927"],"synonyms":[{"name":"Tub4 complex","type":"narrow"},{"name":"gamma-tubulin small complex, centrosomal","type":"narrow"},{"name":"gamma-tubulin small complex, mitotic spindle pole body","type":"narrow"},{"name":"gamma-tubulin small complex, spindle pole body","type":"narrow"},{"name":"gammaTuSC","type":"exact"}],"termid":"GO:0008275","terms_by_termid":{"GO:0008275":null}}


id: PBO:0051154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-33-2 (pseudogene)","termid":"PBO:0051154"}


id: PBO:0029929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_IMP_binding","termid":"PBO:0029929"}


id: PBO:0071611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 29","termid":"PBO:0071611"}


id: MONDO:0011002
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88331],"is_not":false,"summary":null,"term":"MONDO:0011002"}]},"cv_name":"mondo","definition":"Any hereditary motor and sensory neuropathy type 6 in which the cause of the disease is a mutation in the MFN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"},{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy type 6","termid":"MONDO:0019551"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary motor and sensory, type 6A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18091","OMIM:601152"],"synonyms":[{"name":"Charcot-Marie-Tooth disease, type 6","type":"broad"},{"name":"Charcot-Marie-Tooth disease, type 6A","type":"exact"},{"name":"HMSN 6A","type":"related"},{"name":"HMSN6A","type":"exact"},{"name":"MFN2 hereditary motor and sensory neuropathy type 6","type":"exact"},{"name":"hereditary motor and sensory neuropathy VIA","type":"exact"},{"name":"hereditary motor and sensory neuropathy type 6 caused by mutation in MFN2","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type 6","type":"broad"},{"name":"neuropathy, hereditary motor and sensory, type VIA","type":"exact"},{"name":"peripheral neuropathy and optic atrophy","type":"broad"}],"termid":"MONDO:0011002","terms_by_termid":{"MONDO:0011002":null},"xrefs":{"Monarch":{"xref_id":"0011002"}}}


id: PBO:0057842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3156-2","termid":"PBO:0057842"}


id: RO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derives_from","termid":"RO:0001000"}


id: GO:0044747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming distinct miRNA isoforms from a mature miRNA that differ at their 3'-ends.","definition_xrefs":["PMID:22055293","PMID:22055292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-miRNA processing","termid":"GO:0031054"},{"relation_name":"is_a","term_name":"regulatory ncRNA 3'-end processing","termid":"GO:0043628"},{"relation_name":"part_of","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"pre-miRNA 3'-end processing","synonyms":[{"name":"mature miRNA 3'-end processing","type":"related"},{"name":"miRNA 3' end terminal trimming","type":"broad"},{"name":"miRNA 3'-end processing","type":"broad"},{"name":"miRNA trimming","type":"broad"}],"termid":"GO:0044747"}


id: PBO:0067479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 612, pseudogene","termid":"PBO:0067479"}


id: PATO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of an object that has a value that is decreased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased object quality","termid":"PATO:0002303"}


id: PBO:0048198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha2","termid":"PBO:0048198"}


id: PBO:0066332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 and BTB domain containing protein 1","termid":"PBO:0066332"}


id: GO:0050605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: superoxide + reduced rubredoxin + 2 H+ = H2O2 + rubredoxin.","definition_xrefs":["EC:1.15.1.2","MetaCyc:1.15.1.2-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on superoxide radicals as acceptor","termid":"GO:0016721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"superoxide reductase activity","secondary_identifiers":["RHEA:21324"],"synonyms":[{"name":"desulfoferrodoxin activity","type":"related"},{"name":"neelaredoxin activity","type":"related"},{"name":"rubredoxin:superoxide oxidoreductase activity","type":"related"}],"termid":"GO:0050605"}


id: MONDO:0011288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia, optic atrophy, microcephaly, and 10Y sex reversal","secondary_identifiers":["OMIM:603117","UMLS:C1864185","MEDGEN:351065","MESH:C566409"],"synonyms":[{"name":"spastic paraplegia, optic atrophy, microcephaly, and XY SEX reversal","type":"related"}],"termid":"MONDO:0011288","xrefs":{"Monarch":{"xref_id":"0011288"}}}


id: GO:1904010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an Aroclor 1254 stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18602130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Aroclor 1254","termid":"GO:1904010"}


id: GO:0048746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of smooth muscle fiber over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:dph","GOC:mtg_muscle","GOC:lm"],"gene_count":0,"genotype_count":0,"name":"obsolete smooth muscle fiber development (obsolete GO:0048746)","synonyms":[{"name":"smooth muscle fiber development","type":"exact"},{"name":"smooth muscle fibre development","type":"exact"}],"termid":"GO:0048746"}


id: FYPO:0000203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which ergosterol biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal ergosterol biosynthetic process","synonyms":[{"name":"abnormal ergosterol biosynthesis","type":"exact"},{"name":"abnormal ergosterol biosynthetic process during mitotic cell cycle","type":"related"},{"name":"abnormal ergosterol biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0000203"}


id: PBO:0083751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential conserved small ribosomal subunit (40s) synthesis factor; component of the 90S preribosome; required for production of 18S rRNA and small ribosomal subunit; contains five consensus RNA-binding domains and binds to the pre-rRNA at two sites within the 18S region","termid":"PBO:0083751"}


id: PBO:0004682
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae Spt4","termid":"PBO:0004682"}


id: PBO:0051634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 2","termid":"PBO:0051634"}


id: PBO:0056982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30b","termid":"PBO:0056982"}


id: MONDO:0014231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the DNAJC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile-onset Parkinson disease","termid":"MONDO:0000828"},{"relation_name":"is_a","term_name":"atypical juvenile parkinsonism","termid":"MONDO:0018321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile onset Parkinson disease 19A","secondary_identifiers":["DOID:0060891","OMIM:615528","MEDGEN:816141","GARD:18461","UMLS:C3809811"],"synonyms":[{"name":"DNAJC6 Parkinson disease","type":"exact"},{"name":"PARK19","type":"related"},{"name":"PARK19A","type":"related"},{"name":"Park19, formerly","type":"related"},{"name":"Parkinson disease 19, juvenile-onset","type":"related"},{"name":"Parkinson disease 19A, juvenile-onset","type":"related"},{"name":"Parkinson disease 19B, early-onset","type":"related"},{"name":"Parkinson disease caused by mutation in DNAJC6","type":"exact"},{"name":"juvenile onset Parkinson disease 19A","type":"exact"},{"name":"juvenile onset Parkinson disease type 19A","type":"exact"},{"name":"juvenile onset Parkinson's disease 19A","type":"related"}],"termid":"MONDO:0014231","xrefs":{"Monarch":{"xref_id":"0014231"}}}


id: PBO:0049355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 13","termid":"PBO:0049355"}


id: PBO:0077019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"theg spermatid protein","termid":"PBO:0077019"}


id: GO:0050974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a mechanical stimulus is received and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus","termid":"GO:0050982"},{"relation_name":"part_of","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of mechanical stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory transduction of mechanical stimulus during sensory perception","type":"exact"}],"termid":"GO:0050974"}


id: GO:0102485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dATP + 2 H2O = dAMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dATP phosphohydrolase activity (obsolete GO:0102485)","termid":"GO:0102485"}


id: PBO:0053619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 661","termid":"PBO:0053619"}


id: GO:0102559
data:
  {"annotated_genes":["SJAG_00286","SJAG_03949"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97383,98376],"is_not":false,"summary":null,"term":"GO:0102559"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutaminyl-[peptide chain release factor] + S-adenosyl-L-methionine = N(5)-methyl-L-glutaminyl-[peptide chain release factor] + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:42896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamine N-methyltransferase activity","termid":"GO:0036009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_03949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0008276","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"peptide chain release factor N(5)-glutamine methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14992","EC:2.1.1.297"],"synonyms":[{"name":"protein-(glutamine-N5) methyltransferase activity","type":"broad"}],"termid":"GO:0102559","terms_by_termid":{"GO:0102559":null}}


id: GO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: decanoyl-CoA + an alcohol = CoA + a decyl ester.","definition_xrefs":["GOC:mah","PMID:16361250"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol O-decanoyltransferase activity (obsolete GO:0034322)","termid":"GO:0034322"}


id: FYPO:0001441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of the SAGA complex to chromatin at promoters is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein complex localization","termid":"FYPO:0001440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased SAGA complex localization to promoter region","synonyms":[{"name":"decreased SAGA complex localisation to promoter region","type":"exact"},{"name":"decreased SAGA complex localization to promoter region during mitotic cell cycle","type":"related"},{"name":"decreased SAGA complex localization to promoter region during vegetative growth","type":"exact"},{"name":"decreased SAGA complex localization to transcription regulatory region","type":"exact"},{"name":"decreased SAGA complex recruitment","type":"exact"},{"name":"reduced SAGA complex localization to promoter region","type":"exact"},{"name":"reduced SAGA complex recruitment","type":"exact"}],"termid":"FYPO:0001441"}


id: MONDO:0016760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-microcornea syndrome, Seemanova type is characterized by microcephaly and brachycephaly, eye anomalies (microphthalmia, microcornea, congenital cataract), hypogenitalism, severe intellectual deficit, growth retardation and progressive spasticity. It has been described in two patients (a male and his sister's son). Both patients also presented with facial dysmorphism, including upslanting palpebral fissures, epicanthal folds, highly arched palate, microstomia, and retrognathia. This syndrome is transmitted as an X-linked trait.","definition_xrefs":["Orphanet:2528"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-microcornea syndrome, Seemanova type","secondary_identifiers":["GARD:3627","icd11.foundation:1197077842","SCTID:715464002","MEDGEN:419433","UMLS:C2931524","MESH:C537539"],"synonyms":[{"name":"Seemanova Lesny syndrome","type":"related"},{"name":"Seemanova-Lesny syndrome","type":"exact"},{"name":"X-linked microcephaly, microphthalmia, microcornea, congenital cataract, hypogenitalism, mental deficiency, growth retardation","type":"related"},{"name":"microcephaly microcornea syndrome Seemanova type","type":"related"}],"termid":"MONDO:0016760","xrefs":{"Monarch":{"xref_id":"0016760"}}}


id: GO:0045722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gluconeogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gluconeogenesis","termid":"GO:0006111"},{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"positively_regulates","term_name":"gluconeogenesis","termid":"GO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gluconeogenesis","synonyms":[{"name":"activation of gluconeogenesis","type":"narrow"},{"name":"stimulation of gluconeogenesis","type":"narrow"},{"name":"up regulation of gluconeogenesis","type":"exact"},{"name":"up-regulation of gluconeogenesis","type":"exact"},{"name":"upregulation of gluconeogenesis","type":"exact"}],"termid":"GO:0045722"}


id: GO:0004146
data:
  {"annotated_genes":["SJAG_01198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72829],"is_not":false,"summary":null,"term":"GO:0004146"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6,7,8-tetrahydrofolate + NADP+ = 7,8-dihydrofolate + NADPH + H+.","definition_xrefs":["EC:1.5.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01198":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydrofolate reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:15009","MetaCyc:DIHYDROFOLATEREDUCT-RXN","Reactome:R-HSA-1497794"],"synonyms":[{"name":"5,6,7,8-tetrahydrofolate:NADP+ oxidoreductase activity","type":"related"},{"name":"7,8-dihydrofolate reductase activity","type":"related"},{"name":"DHFR","type":"related"},{"name":"NADPH-dihydrofolate reductase activity","type":"related"},{"name":"dihydrofolate reductase:thymidylate synthase activity","type":"related"},{"name":"dihydrofolate reduction","type":"exact"},{"name":"dihydrofolic acid reductase activity","type":"related"},{"name":"dihydrofolic reductase activity","type":"related"},{"name":"folic acid reductase activity","type":"related"},{"name":"folic reductase activity","type":"related"},{"name":"pteridine reductase:dihydrofolate reductase activity","type":"related"},{"name":"tetrahydrofolate dehydrogenase activity","type":"related"},{"name":"thymidylate synthetase-dihydrofolate reductase activity","type":"related"}],"termid":"GO:0004146","terms_by_termid":{"GO:0004146":null}}


id: MONDO:0003790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urothelial carcinoma that arises from the urothelial lining of the prostatic urethra.","definition_xrefs":["NCIT:C39900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary prostate urothelial carcinoma","termid":"MONDO:0002834"},{"relation_name":"is_a","term_name":"urethra transitional cell carcinoma","termid":"MONDO:0002836"},{"relation_name":"is_a","term_name":"prostatic urethral cancer","termid":"MONDO:0003791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostatic urethra urothelial carcinoma","secondary_identifiers":["DOID:6166","UMLS:C1514522","MEDGEN:271406"],"synonyms":[{"name":"prostatic urethra urothelial carcinoma","type":"exact"}],"termid":"MONDO:0003790","xrefs":{"Monarch":{"xref_id":"0003790"}}}


id: PBO:0054283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1674","termid":"PBO:0054283"}


id: GO:1903485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of maintenance of mitotic actomyosin contractile ring localization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of maintenance of mitotic actomyosin contractile ring localization (obsolete GO:1903485)","synonyms":[{"name":"activation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"activation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"activation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"activation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"activation of maintenance of mitotic actomyosin contractile ring localization","type":"narrow"},{"name":"positive regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"positive regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"up regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"up regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"up regulation of maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"up-regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"up-regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"up-regulation of maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"upregulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"upregulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"upregulation of maintenance of mitotic actomyosin contractile ring localization","type":"exact"}],"termid":"GO:1903485"}


id: MONDO:0006494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid disease (obsolete MONDO:0006494)","termid":"MONDO:0006494","xrefs":{"Monarch":{"xref_id":"0006494"}}}


id: MONDO:0044312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"immunoskeletal dysplasia with neurodevelopmental abnormalities","secondary_identifiers":["MEDGEN:1381460","UMLS:C4479452","OMIM:617425"],"synonyms":[{"name":"IMMUNOSKELETAL dysplasia with neurodevelopmental abnormalities","type":"related"},{"name":"ISDNA","type":"related"}],"termid":"MONDO:0044312","xrefs":{"Monarch":{"xref_id":"0044312"}}}


id: PBO:0117087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2R1A antisense RNA 1","termid":"PBO:0117087"}


id: GO:0061880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of mitochondria along microtubules in axons away from the cell body and towards the presynapse.","definition_xrefs":["PMID:24302729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle transport along microtubule","termid":"GO:1902513"},{"relation_name":"regulates","term_name":"anterograde axonal transport of mitochondrion","termid":"GO:0098957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of anterograde axonal transport of mitochondrion","synonyms":[{"name":"regulation of anterograde axon transport of mitochondria","type":"exact"}],"termid":"GO:0061880"}


id: GO:0051215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNAi-mediated post-transcriptional gene silencing pathway induced by DNA viruses leading to a sequence-specific degradation of target mRNAs or inhibition of translation. In plants, DCL3 is the primary Dicer to detect DNA viruses.","definition_xrefs":["PMID:15165191","PMID:17693253","PMID:23151511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi-mediated antiviral immune response","termid":"GO:0009616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNAi-mediated antiviral immunity against DNA virus","synonyms":[{"name":"DNA VIGS","type":"exact"},{"name":"DNA virus induced gene silencing","type":"exact"},{"name":"DNA virus-induced PTGS","type":"exact"},{"name":"DNA virus-induced gene silencing","type":"exact"}],"termid":"GO:0051215"}


id: PBO:0077182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 6","termid":"PBO:0077182"}


id: MONDO:0013757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypothyroidism, congenital, nongoitrous in which the cause of the disease is a mutation in the THRA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism, congenital, nongoitrous","termid":"MONDO:0000045"},{"relation_name":"is_a","term_name":"peripheral resistance to thyroid hormones","termid":"MONDO:0019995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nongoitrous hypothyroidism 6","secondary_identifiers":["UMLS:C3280817","OMIM:614450","MEDGEN:482447","DOID:0070128"],"synonyms":[{"name":"CHNG6","type":"exact"},{"name":"THRA hypothyroidism, congenital, nongoitrous","type":"exact"},{"name":"congenital nongoitrous hypothyroidism 6","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous caused by mutation in THRA","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, 6","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, type 6","type":"exact"}],"termid":"MONDO:0013757","xrefs":{"Monarch":{"xref_id":"0013757"}}}


id: PBO:0070440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase A","termid":"PBO:0070440"}


id: GO:0085015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a dormant state is maintained by the symbiont within the host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dormancy maintenance of symbiont in host","synonyms":[{"name":"NRP","type":"exact"},{"name":"non-replicating persistence","type":"exact"}],"termid":"GO:0085015"}


id: FYPO:0001853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription does not occur when the cell is subject to iron ion starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription during vegetative growth","termid":"FYPO:0001443"},{"relation_name":"is_a","term_name":"decreased transcription during iron starvation","termid":"FYPO:0001852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"abolished transcription during iron starvation","synonyms":[{"name":"abolished transcription during iron depletion","type":"exact"},{"name":"abolished transcription during iron deprivation","type":"exact"},{"name":"abolished transcription during iron ion starvation","type":"exact"},{"name":"abolished transcription during iron starvation during mitotic cell cycle","type":"related"},{"name":"abolished transcription during iron starvation during vegetative growth","type":"exact"},{"name":"transcription abolished during iron starvation","type":"exact"}],"termid":"FYPO:0001853"}


id: MONDO:0014369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Postaxial polydactyly-anterior pituitary anomalies-facial dysmorphism syndrome is a rare, genetic developmental defect during embryogenesis characterized primarily by congenital hypopituitarism and/or postaxial polydactyly. It can be associated with short stature, delayed bone age, hypogonadotropic hypogonadism, and/or midline facial defects (e.g. hypotelorism, mild midface hypoplasia, flat nasal bridge, and cleft lip and/or palate). Hypoplastic anterior pituitary and ectopic posterior pituitary lobe are frequent findings on MRI examination.","definition_xrefs":["Orphanet:420584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"postaxial polydactyly-anterior pituitary anomalies-facial dysmorphism syndrome","secondary_identifiers":["GARD:13349","DOID:0080328","OMIM:615849","UMLS:C4014479","MEDGEN:862916"],"synonyms":[{"name":"CJS","type":"related"},{"name":"Culler-Jones syndrome","type":"related"},{"name":"Pallister-Hall syndrome 2","type":"related"},{"name":"Pallister-Hall syndrome 2, formerly","type":"related"}],"termid":"MONDO:0014369","xrefs":{"Monarch":{"xref_id":"0014369"}}}


id: PBO:0110461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator for ribosomal proteins via TOR signaling pathway Ifh1","termid":"PBO:0110461"}


id: PBO:0052942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 26-1","termid":"PBO:0052942"}


id: MONDO:0013548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase-2 deficiency","secondary_identifiers":["MESH:C536005","UMLS:C0342735","OMIM:614055","MEDGEN:90995"],"synonyms":[{"name":"ACAT2","type":"related"},{"name":"ACAT2 deficiency, Isolated cases","type":"exact"},{"name":"ACAT2D","type":"related"},{"name":"ACETYL-CoA acetyltransferase-2 deficiency","type":"related"},{"name":"Acat2 deficiency","type":"related"},{"name":"Acetocoenzyme A acetyltransferase 2","type":"related"},{"name":"Acetyl CoA acetyltransferase 2 deficiency","type":"related"},{"name":"acetoacetyl CoA thiolase, cytosolic","type":"related"},{"name":"acetyl-CoA acetyltransferase-2 deficiency","type":"exact"}],"termid":"MONDO:0013548","xrefs":{"Monarch":{"xref_id":"0013548"}}}


id: PBO:0079611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 H pseudogene 1","termid":"PBO:0079611"}


id: GO:0032543
data:
  {"annotated_genes":["SJAG_03322","SJAG_01734","SJAG_00936","SJAG_04173","SJAG_04788","SJAG_05573","SJAG_00799","SJAG_04889","SJAG_00653","SJAG_04207","SJAG_00889","SJAG_05560","SJAG_00286","SJAG_03461","SJAG_02067","SJAG_02201","SJAG_04164","SJAG_02836","SJAG_01045","SJAG_05320","SJAG_03649","SJAG_01829","SJAG_02359","SJAG_04244","SJAG_01517","SJAG_16456","SJAG_05218","SJAG_01797","SJAG_04929","SJAG_02428","SJAG_01478","SJAG_02777","SJAG_04494","SJAG_00860","SJAG_01727","SJAG_04409","SJAG_04856","SJAG_02977","SJAG_04490","SJAG_01413","SJAG_00315","SJAG_01352","SJAG_03065","SJAG_02353","SJAG_03402","SJAG_00887","SJAG_01630","SJAG_02762","SJAG_02324","SJAG_00105","SJAG_03636","SJAG_03550","SJAG_01468","SJAG_00497","SJAG_03053","SJAG_03192","SJAG_01249","SJAG_03176","SJAG_04281","SJAG_04216","SJAG_02856","SJAG_01767","SJAG_04753","SJAG_04473","SJAG_00077","SJAG_01719","SJAG_07009","SJAG_00308","SJAG_01577","SJAG_00060","SJAG_03284","SJAG_05244","SJAG_00944","SJAG_03297","SJAG_03040","SJAG_04893","SJAG_00086","SJAG_04635","SJAG_02071","SJAG_03071","SJAG_04019","SJAG_01303","SJAG_00513","SJAG_05221","SJAG_00628","SJAG_02721","SJAG_01591","SJAG_03459","SJAG_01518","SJAG_00148","SJAG_02643","SJAG_04378","SJAG_04738","SJAG_03585","SJAG_04351","SJAG_01368","SJAG_00844","SJAG_01473","SJAG_02236","SJAG_03584","SJAG_04367","SJAG_04959","SJAG_00103","SJAG_04689","SJAG_00782","SJAG_05271","SJAG_04285","SJAG_05008","SJAG_01806","SJAG_04493","SJAG_02452","SJAG_01520","SJAG_04862","SJAG_01463","SJAG_06253","SJAG_06110","SJAG_05270","SJAG_04918","SJAG_02615"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58266,60936,63197,67716,70845,71382,71508,72566,73569,76923,77095,77172,77515,78160,79087,79864,79919,80436,81219,90184,90864,91322,91723,91775,91802,93319,93428,93513,93937,95584,95680,96057,96348,96353,97127,97230,98111,98490,98522,98788,98899,99564,99856,99882,99883,100113,100993,103007,103376,104184,104229,104537,105003,105252,105607,105859,105927,106293,107648,107981,108347,108706,109065,109900,110039,110043,110100,110138,110188,110434,110549,111329,111813,112106,112358,112641,112753,113083,114211,114349,114450,114713,114883,115443,116312,116594,116711,117418,117596,117681,118017,118158,118267,119011,119406,119933,120062,120101,120429],"is_not":false,"summary":null,"term":"GO:0032543"},{"annotations":[93845,81781,81930,75422],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070125"},{"annotations":[75893,103828,92846,110303,80320,109229,103214,107527,100599],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070124"},{"annotations":[103986,97819,97382,100544],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070126"},{"annotations":[100600,114663],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070131"},{"annotations":[102369],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070134"},{"annotations":[96541],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070127"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a protein in a mitochondrion. 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id: FYECO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which manumycin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ manumycin A","synonyms":[{"name":"+ manu-A","type":"exact"}],"termid":"FYECO:0000372"}


id: MONDO:0005364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Graves' disease is an autoimmune disorder that leads to overactivity of the thyroid gland (hyperthyroidism).It is caused by an abnormal immune system response that causes the thyroid gland to produce too much thyroid hormones. Graves disease is the most common cause of hyperthyroidism andoccurs mostoften in women over age 20. However, the disorder may occur at any age and may affect males as well.Treatmentmayinclude radioiodine therapy, antithyroid drugs, and/or thyroid surgery.","definition_xrefs":["GARD:0006549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic diffuse goiter","termid":"MONDO:0001104"},{"relation_name":"is_a","term_name":"autoimmune thyroid disease","termid":"MONDO:0005623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Graves disease","secondary_identifiers":["MEDGEN:6677","MESH:D006111","UMLS:C0018213","DOID:12361","NCIT:C3071","EFO:0004237","SCTID:353295004","NANDO:2200328","ICD9:242.0"],"synonyms":[{"name":"Basedow disease","type":"related"},{"name":"Basedow's disease","type":"related"},{"name":"Graves disease","type":"exact"},{"name":"Graves' disease","type":"related"},{"name":"Graves' hyperthyroidism","type":"related"},{"name":"exophthalmic goiter","type":"exact"},{"name":"exophthalmic goitre","type":"exact"},{"name":"grave's disease","type":"exact"},{"name":"parry disease","type":"related"}],"termid":"MONDO:0005364","xrefs":{"Monarch":{"xref_id":"0005364"}}}


id: MONDO:0013116
data:
  {"annotated_genes":["SJAG_03992","SJAG_01647"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87370,87371],"is_not":false,"summary":null,"term":"MONDO:0013116"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01647":null,"SJAG_03992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0004069"],"is_obsolete":false,"name":"congenital cataract-progressive muscular hypotonia-hearing loss-developmental delay syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613076","MEDGEN:416525","Orphanet:330054","UMLS:C2751320","MESH:C567769","GARD:10522"],"synonyms":[{"name":"congenital cataract-progressive muscular hypotonia-deafness-developmental delay syndrome","type":"exact"},{"name":"congenital cataract-progressive muscular hypotonia-hearing loss-developmental delay syndrome","type":"exact"},{"name":"mitochondrial Complex deficiency, combined","type":"related"},{"name":"myopathy with cataract and combined respiratory chain deficiency","type":"related"},{"name":"myopathy with cataract and combined respiratory-chain deficiency","type":"related"},{"name":"myopathy, mitochondrial progressive, with congenital cataract and developmental delay","type":"exact"},{"name":"myopathy, mitochondrial progressive, with congenital cataract, hearing loss, and developmental delay","type":"related"}],"termid":"MONDO:0013116","terms_by_termid":{"MONDO:0013116":null},"xrefs":{"Monarch":{"xref_id":"0013116"}}}


id: PBO:0052190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMA1 antisense RNA 3","termid":"PBO:0052190"}


id: PBO:0078272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 8-1","termid":"PBO:0078272"}


id: PBO:0091351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial expression network (MIOREX) component Mrx11","termid":"PBO:0091351"}


id: GO:0043927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap.","definition_xrefs":["GOC:mtg_mpo"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic nuclear-transcribed mRNA catabolic process involved in endonucleolytic cleavage-dependent decay (obsolete GO:0043927)","termid":"GO:0043927"}


id: SO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The simplest repeated component of a repeat region. A single repeat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_unit","secondary_identifiers":["http://www.insdc.org/files/feature_table.html"],"synonyms":[{"name":"repeat unit","type":"exact"}],"termid":"SO:0000726"}


id: MONDO:0007855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratosis, familial actinic","secondary_identifiers":["MEDGEN:390709","UMLS:C2675099","MESH:C567190","OMIM:148390"],"synonyms":[{"name":"keratosis, familial actinic","type":"exact"}],"termid":"MONDO:0007855","xrefs":{"Monarch":{"xref_id":"0007855"}}}


id: GO:0001524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The colorless and basic protein moiety of hemoglobin and myoglobins.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete globin (obsolete GO:0001524)","synonyms":[{"name":"globin","type":"exact"}],"termid":"GO:0001524"}


id: MONDO:0018309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hirschsprung disease (HSCR) is a congenital intestinal motility disorder that is characterized by signs of intestinal obstruction due to the presence of an aganglionic segment of variable extent in the terminal part of the colon.","definition_xrefs":["Orphanet:388"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"megacolon","termid":"MONDO:0001273"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Hirschsprung disease","secondary_identifiers":["NORD:1244","SCTID:204739008","MEDGEN:5559","OMIMPS:142623","MESH:D006627","DOID:10487","GARD:6660","NCIT:C34700","icd11.foundation:1772690306","MedDRA:10010539","NANDO:2200948","UMLS:C0019569","NANDO:2200945","NANDO:1200903"],"synonyms":[{"name":"HSCR","type":"exact"},{"name":"Hirschsprung disease","type":"exact"},{"name":"Hirschsprung disease susceptibility","type":"exact"},{"name":"Hirschsprung's disease","type":"exact"},{"name":"aganglionic megacolon","type":"exact"},{"name":"congenital intestinal aganglionosis","type":"exact"},{"name":"congenital megacolon","type":"exact"},{"name":"macrocolon","type":"related"},{"name":"pelvirectal achalasia","type":"exact"}],"termid":"MONDO:0018309","xrefs":{"Monarch":{"xref_id":"0018309"}}}


id: PBO:0113290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted membrane protein required for lumenal ER protein retention; Golgi inorganic phosphate (Pi) exporter that balances Pi import associated with NDP-sugar transport into the Golgi; involved in recycling of early glycosyltransferases from late to early Golgi compartments; mutants secrete the endogenous ER protein, BiP (Kar2p)","termid":"PBO:0113290"}


id: MONDO:0005688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus campylobacter.","definition_xrefs":["MESH:D002169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"gastroenteritis","termid":"MONDO:0002269"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"campylobacteriosis","secondary_identifiers":["DOID:13622","icd11.foundation:1012026026","MEDGEN:14296","SCTID:86500004","UMLS:C0006818","EFO:0007190"],"termid":"MONDO:0005688","xrefs":{"Monarch":{"xref_id":"0005688"}}}


id: MONDO:0000652
data:
  {"annotated_genes":["SJAG_00031","SJAG_02855","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[88626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[87718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[88519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[87300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[86877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the integumental system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_02855":null,"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"integumentary system benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060121"],"synonyms":[{"name":"integumental system benign neoplasm","type":"exact"}],"termid":"MONDO:0000652","terms_by_termid":{"MONDO:0007908":null,"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0009578":null,"MONDO:0010621":null,"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0000652"}}}


id: MONDO:0015988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multicystic dysplastic kidney (MCDK) is a congenital anomaly of the kidney and urinary tract (CAKUT) in which one or both kidneys (unilateral or bilateral MCDK respectively) are large, distended by multiple cysts, and non-functional.","definition_xrefs":["Orphanet:1851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic kidney disease","termid":"MONDO:0002473"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"multicystic dysplastic kidney","secondary_identifiers":["NANDO:2200158","SCTID:204962002","UMLS:C3714581","NCIT:C123031","MESH:D021782","GARD:18748","ICD9:753.19","MEDGEN:811388","icd11.foundation:1178642763"],"synonyms":[{"name":"MCDK","type":"exact"},{"name":"multicystic renal dysplasia","type":"exact"}],"termid":"MONDO:0015988","xrefs":{"Monarch":{"xref_id":"0015988"}}}


id: MONDO:0014846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome","termid":"MONDO:0018446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0005027"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 23","secondary_identifiers":["MEDGEN:1667331","GARD:17677","OMIM:616949","Orphanet:404493","UMLS:C4750914","DOID:0111613"],"synonyms":[{"name":"SCAR23","type":"exact"},{"name":"autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome due to TUD deficiency","type":"exact"},{"name":"spinocerebellar ataxia autosomal recessive type 23","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 23","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive type 23","type":"exact"}],"termid":"MONDO:0014846","xrefs":{"Monarch":{"xref_id":"0014846"}}}


id: PBO:0085769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase that regulates the G2/M transition; negative regulator of the Cdc28p kinase; morphogenesis checkpoint kinase; positive regulator of sphingolipid biosynthesis via Orm2p; phosphorylates a tyrosine residue in the N-terminus of Hsp90 in a cell-cycle associated manner, thus modulating the ability of Hsp90 to chaperone a selected clientele; localizes to the nucleus and to the daughter side of the mother-bud neck; homolog of S. pombe Wee1p; potential Cdc28p substrate","termid":"PBO:0085769"}


id: GO:0033314
data:
  {"annotated_genes":["SJAG_02563","SJAG_03927","SJAG_01044","SJAG_01076","SJAG_03695","SJAG_03160","SJAG_02771","SJAG_02098","SJAG_01605","SJAG_01205","SJAG_02074","SJAG_01010","SJAG_00364","SJAG_04671","SJAG_03026","SJAG_02266","SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72879,74105,76681,80740,81334,93284,95827,101088,101255,102448,108566,111285,114019,118062,118809,119115,119287],"is_not":false,"summary":null,"term":"GO:0033314"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a mitotic DNA replication checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication checkpoint signaling","termid":"GO:0000076"},{"relation_name":"is_a","term_name":"mitotic DNA integrity checkpoint signaling","termid":"GO:0044774"},{"relation_name":"is_a","term_name":"mitotic G2/M transition checkpoint","termid":"GO:0044818"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01605":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_04287":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0044772","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072446","GO:0031574","GO:0072443","GO:0072459"],"synonyms":[{"name":"S-M DNA replication checkpoint","type":"exact"},{"name":"S-M checkpoint","type":"exact"},{"name":"S-phase checkpoint","type":"broad"},{"name":"mitotic DNA replication checkpoint","type":"exact"},{"name":"mitotic cell cycle DNA replication checkpoint","type":"exact"},{"name":"signal transduction involved in S-M checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic DNA replication checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic G2/M transition decatenation checkpoint","type":"related"}],"termid":"GO:0033314","terms_by_termid":{"GO:0033314":null}}


id: GO:0051423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of endo-(1->4)-beta-xylanase activity, the catalysis of the endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.","definition_xrefs":["GOC:ai","EC:3.2.1.8"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of endo-1,4-beta-xylanase activity (obsolete GO:0051423)","synonyms":[{"name":"activation of endo-1,4-beta-xylanase activity","type":"narrow"},{"name":"endo-1,4-beta-xylanase activator","type":"related"},{"name":"stimulation of endo-1,4-beta-xylanase activity","type":"narrow"},{"name":"up regulation of endo-1,4-beta-xylanase activity","type":"exact"},{"name":"up-regulation of endo-1,4-beta-xylanase activity","type":"exact"},{"name":"upregulation of endo-1,4-beta-xylanase activity","type":"exact"},{"name":"xylanase activator","type":"related"}],"termid":"GO:0051423"}


id: PBO:0003957
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.3","termid":"PBO:0003957"}


id: GO:1900450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutamate receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"negatively_regulates","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutamate receptor signaling pathway","synonyms":[{"name":"down regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"down regulation of glutamate signaling pathway","type":"exact"},{"name":"down regulation of glutamate signalling pathway","type":"exact"},{"name":"down-regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"down-regulation of glutamate signaling pathway","type":"exact"},{"name":"down-regulation of glutamate signalling pathway","type":"exact"},{"name":"downregulation of glutamate receptor signaling pathway","type":"exact"},{"name":"downregulation of glutamate signaling pathway","type":"exact"},{"name":"downregulation of glutamate signalling pathway","type":"exact"},{"name":"inhibition of glutamate receptor signaling pathway","type":"narrow"},{"name":"inhibition of glutamate signaling pathway","type":"exact"},{"name":"inhibition of glutamate signalling pathway","type":"exact"},{"name":"negative regulation of glutamate signaling pathway","type":"exact"},{"name":"negative regulation of glutamate signalling pathway","type":"exact"}],"termid":"GO:1900450"}


id: GO:0071023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that forms during the addition of a specific spliced leader (SL) sequence to the 5'-end of a messenger RNA primary transcript, a process which occurs in a number of eukaryotic organisms, including trypanosomatid protozoans, euglenoids, nematodes, trematodes, and chordates.","definition_xrefs":["GOC:krc","ISBN:0879697393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"trans spliceosomal complex","termid":"GO:0071023"}


id: PBO:0063176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate and breast cancer overexpressed 1","termid":"PBO:0063176"}


id: PBO:0048321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 32","termid":"PBO:0048321"}


id: MONDO:0019855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Athyreosis is a form of thyroid dysgenesis characterized by complete absence of thyroid tissue that results in primary congenital hypothyroidism, a permanent thyroid deficiency that is present from birth.","definition_xrefs":["Orphanet:95713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized resistance to thyroid hormone","termid":"MONDO:0009043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"athyreosis","secondary_identifiers":["NANDO:2200331","MEDGEN:155447","UMLS:C0749420","GARD:16842"],"termid":"MONDO:0019855","xrefs":{"Monarch":{"xref_id":"0019855"}}}


id: MONDO:0020575
data:
  {"annotated_genes":["SJAG_02717","SJAG_04901","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013529"},{"annotations":[89024,89023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013966"},{"annotations":[88539,88540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"}]},"cv_name":"mondo","definition":"A ventricular tachycardia that is irregular in rate and rhythm.","definition_xrefs":["NCIT:C111648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular tachycardia","termid":"MONDO:0005477"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02717":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"polymorphic ventricular tachycardia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:138002","UMLS:C0344432","HP:0031677","SCTID:251159007","icd11.foundation:16452928"],"synonyms":[{"name":"polymorphic ventricular tachycardia","type":"exact"},{"name":"ventricular tachycardia, polymorphic","type":"exact"}],"termid":"MONDO:0020575","terms_by_termid":{"MONDO:0013529":null,"MONDO:0013966":null,"MONDO:0032915":null},"xrefs":{"Monarch":{"xref_id":"0020575"}}}


id: PBO:0068194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 501","termid":"PBO:0068194"}


id: PBO:0001728
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High Osmolarity Sensitive","termid":"PBO:0001728"}


id: GO:0090692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The site on the mitochondrial membrane where the separation of a single continuous mitochondrial membrane into two membranes occurs as a final step in mitochondrial fission.","definition_xrefs":["GOC:bc","GOC:PARL","PMID:26618722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"mitochondrial membrane scission site","termid":"GO:0090692"}


id: PBO:0112997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,3-mannosyltransferase; integral membrane glycoprotein of Golgi complex, required for addition of alpha1,3-mannose linkages to N-linked and O-linked oligosaccharides; one of five S. cerevisiae proteins of MNN1 family; targeted to vacuole via AP-3 pathway","termid":"PBO:0112997"}


id: GO:0047653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-(+)-allantoin = (R)-(-)-allantoin.","definition_xrefs":["EC:5.1.99.3","RHEA:10804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"allantoin racemase activity","secondary_identifiers":["MetaCyc:ALLANTOIN-RACEMASE-RXN","KEGG_REACTION:R03925"],"termid":"GO:0047653"}


id: GO:0002051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast fate commitment","termid":"GO:0002051"}


id: PBO:0004438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim22 (predicted)","termid":"PBO:0004438"}


id: PBO:0040220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha tubulin acetyltransferase 1","termid":"PBO:0040220"}


id: MOD:01321
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:176#C","PubMed:9448752","PubMed:11510821","PubMed:12422359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Michael addition of BHT quinone methide to cysteine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01321"}


id: MONDO:0017468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital shoulder dislocation","secondary_identifiers":["Orphanet:295030","UMLS:C0265562","SCTID:23876003","GARD:21209","icd11.foundation:1926945459","ICD9:755.59","MEDGEN:539331"],"termid":"MONDO:0017468","xrefs":{"Monarch":{"xref_id":"0017468"}}}


id: MONDO:0006562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete incontinentia pigmenti achromians (obsolete MONDO:0006562)","secondary_identifiers":["SCTID:218358001","NCIT:C7582","MESH:D010859"],"synonyms":[{"name":"incontinentia pigmenti achromians syndrome","type":"exact"},{"name":"incontinentia pigmenti syndrome","type":"related"}],"termid":"MONDO:0006562","xrefs":{"Monarch":{"xref_id":"0006562"}}}


id: PBO:0076130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 1","termid":"PBO:0076130"}


id: GO:0019920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of internal peptidyl-1-thioglycine, which has an internal C=S bond, instead of an internal C=O bond, in the peptide.","definition_xrefs":["PMID:10660523","RESID:AA0265","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-1-thioglycine biosynthetic process, internal (obsolete GO:0019920)","synonyms":[{"name":"peptidyl-1-thioglycine anabolism, internal","type":"exact"},{"name":"peptidyl-1-thioglycine formation, internal","type":"exact"},{"name":"peptidyl-1-thioglycine synthesis, internal","type":"exact"}],"termid":"GO:0019920"}


id: GO:0030352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,4,5,6-tetrakisphosphate + H2O = inositol-1,4,5-trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inositol-1,4,5,6-tetrakisphosphate 6-phosphatase activity","termid":"GO:0030352"}


id: PBO:0000638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp7","termid":"PBO:0000638"}


id: GO:0030509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:17428827","ISBN:0878932437","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor superfamily signaling pathway","termid":"GO:0141091"},{"relation_name":"part_of","term_name":"cellular response to BMP stimulus","termid":"GO:0071773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"BMP signaling pathway","secondary_identifiers":["GO:0008101","Reactome:R-HSA-201451"],"synonyms":[{"name":"BMP receptor signaling pathway","type":"related"},{"name":"BMP signalling pathway","type":"exact"},{"name":"bone morphogenetic protein signaling pathway","type":"exact"},{"name":"bone morphogenetic protein signalling pathway","type":"exact"},{"name":"decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"decapentaplegic signaling pathway","type":"narrow"},{"name":"dpp receptor signaling pathway","type":"narrow"},{"name":"dpp receptor signalling pathway","type":"narrow"},{"name":"dpp signaling pathway","type":"narrow"}],"termid":"GO:0030509"}


id: PBO:0046199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A3 family member C, pseudogene","termid":"PBO:0046199"}


id: SO:0000408
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The interbase position where something (eg an aberration) occurred.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000408 site (obsolete SO:0000408)","termid":"SO:0000408"}


id: MONDO:0017089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A megalencephaly (disease) that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephaly","termid":"MONDO:0016608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated megalencephaly","secondary_identifiers":["GARD:20977","Orphanet:268920"],"synonyms":[{"name":"isolated macrencephaly","type":"exact"},{"name":"isolated megalencephaly (disease)","type":"exact"},{"name":"nonsyndromic megalencephaly (disease)","type":"exact"}],"termid":"MONDO:0017089","xrefs":{"Monarch":{"xref_id":"0017089"}}}


id: GO:0140633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a CARD8 inflammasome complex.","definition_xrefs":["PMID:33420033","PMID:33542150","PMID:33420028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0023052","GO:0065003"],"is_obsolete":false,"name":"CARD8 inflammasome complex assembly","termid":"GO:0140633"}


id: PBO:0016105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase Qns1 (predicted)","termid":"PBO:0016105"}


id: PATO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000335 variegated (obsolete PATO:0000335)","synonyms":[{"name":"mottled (sensu Drosophila)","type":"related"}],"termid":"PATO:0000335"}


id: GO:0005471
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59110],"is_not":false,"summary":null,"term":"GO:0005471"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP(out) + ADP(in) = ATP(in) + ADP(out).","definition_xrefs":["TC:2.A.29.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transmembrane transporter activity","termid":"GO:0005347"},{"relation_name":"is_a","term_name":"ADP transmembrane transporter activity","termid":"GO:0015217"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ATP:ADP antiporter activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["GO:0005349","RHEA:34999"],"synonyms":[{"name":"ADP/ATP carrier protein","type":"exact"},{"name":"ADP/ATP translocase","type":"exact"},{"name":"ATP/ADP exchange","type":"exact"},{"name":"ATP/ADP exchanger","type":"exact"},{"name":"adenine nucleotide translocase","type":"exact"}],"termid":"GO:0005471","terms_by_termid":{"GO:0005471":null}}


id: GO:2000764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of semaphorin-plexin signaling pathway involved in outflow tract morphogenesis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of semaphorin-plexin signaling pathway","termid":"GO:2001262"},{"relation_name":"positively_regulates","term_name":"semaphorin-plexin signaling pathway involved in outflow tract morphogenesis","termid":"GO:0071527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of semaphorin-plexin signaling pathway involved in outflow tract morphogenesis","synonyms":[{"name":"positive regulation of semaphorin-plexin signalling pathway involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:2000764"}


id: GO:0035491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the synthesis or release of any leukotriene following a stimulus as part of an inflammatory response.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukotriene production involved in inflammatory response","termid":"GO:0035490"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"leukotriene production involved in inflammatory response","termid":"GO:0002540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukotriene production involved in inflammatory response","termid":"GO:0035491"}


id: PBO:0054388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1784","termid":"PBO:0054388"}


id: PBO:0087933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational activator for mRNAs with internal ribosome entry sites; associates with polysomes and binds to a specific subset of mRNAs; localizes to RNA processing bodies (P bodies) and to stress granules; may have a role in translation regulation under stress conditions; ortholog of human ZNF9/CNBP, a gene involved in myotonic dystrophy type 2","termid":"PBO:0087933"}


id: MONDO:0014099
data:
  {"annotated_genes":["SJAG_03361"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86850],"is_not":false,"summary":null,"term":"MONDO:0014099"}]},"cv_name":"mondo","definition":"Any nephrotic syndrome in which the cause of the disease is a mutation in the ARHGDIA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03361":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:815283","DOID:0080389","GARD:15925","OMIM:615244","UMLS:C3808953"],"synonyms":[{"name":"ARHGDIA nephrotic syndrome","type":"exact"},{"name":"NPHS8","type":"related"},{"name":"nephrotic syndrome caused by mutation in ARHGDIA","type":"exact"},{"name":"nephrotic syndrome, type 8","type":"exact"}],"termid":"MONDO:0014099","terms_by_termid":{"MONDO:0014099":null},"xrefs":{"Monarch":{"xref_id":"0014099"}}}


id: PBO:0091877
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"also see PMID:24493644 for 5' UTR characterization","termid":"PBO:0091877"}


id: PBO:0059465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 4","termid":"PBO:0059465"}


id: MONDO:0017549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humero-radio-ulnar synostosis","termid":"MONDO:0017983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humero-radio-ulnar synostosis, bilateral","secondary_identifiers":["Orphanet:295207","icd11.foundation:557249772","UMLS:C5438978","MEDGEN:1744773"],"synonyms":[{"name":"humero-radio-ulnar fusion, bilateral","type":"exact"}],"termid":"MONDO:0017549","xrefs":{"Monarch":{"xref_id":"0017549"}}}


id: MONDO:1012498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary open angle glaucoma, non-human animal","termid":"MONDO:1011998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary open angle glaucoma, dog","secondary_identifiers":["OMIA:002046-9615"],"termid":"MONDO:1012498","xrefs":{"Monarch":{"xref_id":"1012498"}}}


id: PR:P50519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein hsp9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.04c","synonyms":[{"name":"Spom972h-hsp9","type":"exact"}],"termid":"PR:P50519"}


id: PBO:0057799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3121","termid":"PBO:0057799"}


id: PBO:0038348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-active_ingredient_in'","termid":"PBO:0038348"}


id: PR:P32587
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pyp3 gene.","definition_xrefs":["UniProtKB:P32587","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.09","synonyms":[{"name":"PTPase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pyp3","type":"exact"},{"name":"protein-tyrosine phosphatase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32587"}


id: GO:0003379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell taking part in gastrulation.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity involved in ameboidal cell migration","termid":"GO:0003365"},{"relation_name":"part_of","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of cell polarity involved in gastrulation cell migration","termid":"GO:0003379"}


id: PBO:0066843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 143","termid":"PBO:0066843"}


id: PBO:0066682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, LIM domain interacting","termid":"PBO:0066682"}


id: GO:1901596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reversine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to reversine","termid":"GO:1901596"}


id: GO:2001208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription elongation mediated by RNA polymerase I.","definition_xrefs":["PMID:20299458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase I","termid":"GO:0016479"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription, elongation","termid":"GO:0032785"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase I","termid":"GO:2001207"},{"relation_name":"negatively_regulates","term_name":"transcription elongation by RNA polymerase I","termid":"GO:0006362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"negative regulation of transcription elongation by RNA polymerase I","synonyms":[{"name":"negative regulation of RNA elongation from Pol I promoter","type":"exact"},{"name":"negative regulation of transcription elongation from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2001208"}


id: GO:0016427
data:
  {"annotated_genes":["SJAG_00499","SJAG_01269","SJAG_04453","SJAG_01314","SJAG_00325","SJAG_02099"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106340"},{"annotations":[112130,80968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052735"},{"annotations":[107725,81274,72351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016428"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing methylcytosine.","definition_xrefs":["GOC:go-curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_00499":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_02099":null,"SJAG_04453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0016741","GO:0140101","GO:0016740"],"is_obsolete":false,"name":"tRNA (cytidine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tRNA (cytosine) methyltransferase activity","type":"exact"}],"termid":"GO:0016427","terms_by_termid":{"GO:0016428":null,"GO:0052735":null,"GO:0106340":null}}


id: PBO:0057129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 212","termid":"PBO:0057129"}


id: SO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogenic constant region of an immunoglobulin gene which closely resembles a known functional Imunoglobulin constant gene but in which the coding region has stop codons, frameshift mutations or a mutation that effects the initiation codon.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_pseudogene","termid":"SO:0002098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_C_pseudogene","synonyms":[{"name":"IG C pseudogene","type":"exact"}],"termid":"SO:0002100"}


id: MONDO:0000355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ullrich congenital muscular dystrophy (UCMD) is characterized by early-onset, generalized and slowly progressive muscle weakness, multiple proximal joint contractures, marked hypermobility of the distal joints and normal intelligence.","definition_xrefs":["Orphanet:75840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"Ullrich congenital muscular dystrophy","secondary_identifiers":["NANDO:2200862","NCIT:C123438","icd11.foundation:1011547453","OMIMPS:254090","GARD:4769","MEDGEN:1642667","MESH:C537521","UMLS:C4551860","DOID:0050558","NANDO:1200215","SCTID:240062007"],"synonyms":[{"name":"UCMD","type":"exact"},{"name":"Ullrich disease","type":"related"},{"name":"Ullrich scleroatonic muscular dystrophy","type":"exact"},{"name":"congenital muscular dystrophy, Ullrich type","type":"related"},{"name":"late onset scleroatonic familial myopathy (subtype)","type":"related"},{"name":"scleroatonic Ullrich disease","type":"exact"},{"name":"scleroatonic muscular dystrophy","type":"exact"}],"termid":"MONDO:0000355","xrefs":{"Monarch":{"xref_id":"0000355"}}}


id: MONDO:1010031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Triploidy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder, non-human animal","termid":"MONDO:1011307"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triploidy, non-human animal","secondary_identifiers":["OMIA:001180"],"termid":"MONDO:1010031","xrefs":{"Monarch":{"xref_id":"1010031"}}}


id: GO:0019094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mRNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pole plasm RNA localization","termid":"GO:0007316"},{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pole plasm mRNA localization","secondary_identifiers":["GO:0048120"],"synonyms":[{"name":"establishment and maintenance of mRNA localization in pole plasm","type":"exact"},{"name":"establishment and maintenance of pole plasm mRNA localization","type":"exact"},{"name":"oocyte pole plasm mRNA localization","type":"exact"},{"name":"pole granule RNA localization","type":"broad"},{"name":"pole plasm mRNA localisation","type":"exact"}],"termid":"GO:0019094"}


id: MONDO:0013448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"generalized epilepsy with febrile seizures plus","termid":"MONDO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus, type 8","secondary_identifiers":["MEDGEN:462541","UMLS:C3151191","DOID:0111299","GARD:18664","OMIM:613828"],"synonyms":[{"name":"GEFSP8","type":"exact"},{"name":"Gefs+, type 8","type":"related"},{"name":"generalized epilepsy with febrile seizures plus, type 8","type":"exact"}],"termid":"MONDO:0013448","xrefs":{"Monarch":{"xref_id":"0013448"}}}


id: PBO:0040672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 31","termid":"PBO:0040672"}


id: PBO:0069381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 641, pseudogene","termid":"PBO:0069381"}


id: PBO:0076041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 38 like","termid":"PBO:0076041"}


id: MONDO:0014025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proximal spinal muscular atrophy","termid":"MONDO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"lower motor neuron syndrome with late-adult onset","secondary_identifiers":["Orphanet:276435","icd11.foundation:1650555742","MEDGEN:767312","DOID:0081356","OMIM:615048","UMLS:C3554398","GARD:17282"],"synonyms":[{"name":"SMAJ","type":"related"},{"name":"spinal muscular atrophy, Jokela type","type":"related"}],"termid":"MONDO:0014025","xrefs":{"Monarch":{"xref_id":"0014025"}}}


id: PBO:0076585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 8B","termid":"PBO:0076585"}


id: GO:0004974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a leukotriene to initiate a change in cell activity. Leukotrienes are pharmacologically active substances with a set of three conjugated double bonds; some contain a peptide group based on cysteine.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid receptor activity","termid":"GO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"leukotriene receptor activity","termid":"GO:0004974"}


id: PBO:0046961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member A","termid":"PBO:0046961"}


id: GO:0032389
data:
  {"annotated_genes":["SJAG_02187","SJAG_01620"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72406,73175],"is_not":false,"summary":null,"term":"GO:0032389"}]},"cv_name":"cellular_component","definition":"A heterodimer involved in the recognition of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MLH1 and PMS2.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01620":null,"SJAG_02187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"MutLalpha complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"MLH1/PMS2 complex","type":"exact"},{"name":"MMR complex","type":"broad"},{"name":"MutL-alpha complex","type":"exact"}],"termid":"GO:0032389","terms_by_termid":{"GO:0032389":null}}


id: MONDO:0016169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Chronic form of acquired peripheral neuropathy.","definition_xrefs":["MONDO:patterns/chronic"],"gene_count":0,"genotype_count":0,"name":"obsolete chronic acquired demyelinating polyneuropathy (obsolete MONDO:0016169)","secondary_identifiers":["Orphanet:208974"],"synonyms":[{"name":"CADP","type":"exact"},{"name":"acquired peripheral neuropathy, chronic","type":"exact"},{"name":"chronic acquired peripheral neuropathy","type":"exact"}],"termid":"MONDO:0016169","xrefs":{"Monarch":{"xref_id":"0016169"}}}


id: PBO:0048261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose mutarotase","termid":"PBO:0048261"}


id: MONDO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"tympanitis","termid":"MONDO:0024616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute tympanitis","secondary_identifiers":["MEDGEN:509976","UMLS:C0155460","SCTID:297009","DOID:13790","ICD9:384.00"],"synonyms":[{"name":"acute myringitis","type":"exact"}],"termid":"MONDO:0001802","xrefs":{"Monarch":{"xref_id":"0001802"}}}


id: GO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation without cellular fusion.","definition_xrefs":["GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transduction involved in regulation of conjugation with mutual genetic exchange (obsolete GO:0000757)","synonyms":[{"name":"signal transduction involved in conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000757"}


id: PBO:0052823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 89, pseudogene","termid":"PBO:0052823"}


id: PBO:0088335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L22","termid":"PBO:0088335"}


id: MONDO:0000471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the tricuspid valve.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve disorder","termid":"MONDO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid valve disorder","secondary_identifiers":["DOID:0050826","NCIT:C78649","SCTID:20721001","UMLS:C0264882","EFO:0009568","ICD9:397.0","MEDGEN:120507"],"synonyms":[{"name":"RH. tricuspid valve disease","type":"narrow"},{"name":"disease of tricuspid valve","type":"exact"},{"name":"disease or disorder of tricuspid valve","type":"exact"},{"name":"disorder of tricuspid valve","type":"exact"},{"name":"rheumatic disease of tricuspid valve","type":"narrow"},{"name":"rheumatic tricuspid valve disease","type":"narrow"},{"name":"tricuspid disease","type":"exact"},{"name":"tricuspid valve disease","type":"exact"},{"name":"tricuspid valve disease or disorder","type":"exact"},{"name":"tricuspid valve disorder","type":"exact"}],"termid":"MONDO:0000471","xrefs":{"Monarch":{"xref_id":"0000471"}}}


id: PATO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being drawn in or pulled back from any given point.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retracted","synonyms":[{"name":"moved ","type":"broad"},{"name":"retruded","type":"related"}],"termid":"PATO:0001477"}


id: GO:0043076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of a megasporocyte, a diploid cell that undergoes meiosis to produce four megaspores, and its descendents.","definition_xrefs":["GOC:jl","ISBN:0618254153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"megasporocyte nucleus","synonyms":[{"name":"megaspore mother cell nucleus","type":"exact"}],"termid":"GO:0043076"}


id: PBO:0041801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 10","termid":"PBO:0041801"}


id: GO:1903292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a Golgi membrane.","definition_xrefs":["GO_REF:0000087","PMID:11378902","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to Golgi membrane","synonyms":[{"name":"protein localisation in Golgi membrane","type":"exact"},{"name":"protein localisation to Golgi membrane","type":"exact"},{"name":"protein localization in Golgi membrane","type":"exact"}],"termid":"GO:1903292"}


id: PBO:0053507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 491","termid":"PBO:0053507"}


id: PBO:0090555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex regulatory subunit Nat1","termid":"PBO:0090555"}


id: PATO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000310 color value (obsolete PATO:0000310)","termid":"PATO:0000310"}


id: PATO:0000927
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to being sensitivity to the action of radiant energy.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photosensitivity","termid":"PATO:0000927"}


id: MONDO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine adnexa cancer","secondary_identifiers":["ICD9:183","MEDGEN:509333","UMLS:C0153584","DOID:11747","ICD9:183.9"],"termid":"MONDO:0001351","xrefs":{"Monarch":{"xref_id":"0001351"}}}


id: PBO:0063930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired immunoglobin like type 2 receptor alpha","termid":"PBO:0063930"}


id: GO:0003165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a Purkinje myocyte over time, from its formation to the mature structure. The Purkinje myocyte (also known as cardiac Purkinje fiber) is part of the cardiac conduction system that receives signals from the bundle of His and innervates the ventricular cardiac muscle.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue development","termid":"GO:0003229"},{"relation_name":"part_of","term_name":"His-Purkinje system development","termid":"GO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Purkinje myocyte development","synonyms":[{"name":"cardiac Purkinje fiber development","type":"exact"}],"termid":"GO:0003165"}


id: PBO:0114885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein co-chaperone with a zinc finger motif Zim17","termid":"PBO:0114885"}


id: PBO:0051307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR1-1 (pseudogene)","termid":"PBO:0051307"}


id: GO:0060349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone morphogenesis","termid":"GO:0060349"}


id: FYPO:0008057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed  ability of an enzyme to catalyze consecutive reactions without releasing the substrate (i.e. template) is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal enzyme processivity","termid":"FYPO:0008057"}


id: PBO:0075506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPC24 component of NDC80 kinetochore complex","termid":"PBO:0075506"}


id: PBO:0080821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XXYLT1 antisense RNA 2","termid":"PBO:0080821"}


id: PBO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-independent regulatory protein Pac2","termid":"PBO:0001835"}


id: GO:0097618
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dinoflagellate sulcus that extends all the way to the posterior end of the cell (also known as antapex). The presence of a sulcal notch makes the dinoflagellate hypocone appear bilobed.","definition_xrefs":["GOC:at","PMID:7002229","Wikipedia:Dinoflagellate#Morphology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinoflagellate sulcus","termid":"GO:0097612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0009986"],"is_obsolete":false,"name":"dinoflagellate sulcal notch","synonyms":[{"name":"dinoflagellate sulcus notch","type":"exact"},{"name":"sulcal notch","type":"related"}],"termid":"GO:0097618"}


id: GO:0042273
data:
  {"annotated_genes":["SJAG_02952","SJAG_04919","SJAG_01621","SJAG_01122","SJAG_02891","SJAG_01954","SJAG_00390","SJAG_04562","SJAG_03413","SJAG_03080","SJAG_04304","SJAG_03425","SJAG_03773","SJAG_00231","SJAG_02475","SJAG_01454","SJAG_04004","SJAG_04599","SJAG_01811","SJAG_03713","SJAG_00949","SJAG_01839","SJAG_03466","SJAG_02830","SJAG_01606","SJAG_00932","SJAG_01581","SJAG_02868","SJAG_02427","SJAG_05248","SJAG_05223","SJAG_02374","SJAG_04992","SJAG_04330","SJAG_02745","SJAG_00689","SJAG_00749","SJAG_03789","SJAG_04890","SJAG_03155","SJAG_02754","SJAG_00323","SJAG_00752","SJAG_04108","SJAG_02759","SJAG_03012","SJAG_04308","SJAG_04414","SJAG_00271","SJAG_02644","SJAG_04940","SJAG_02417","SJAG_03496","SJAG_01365","SJAG_00921","SJAG_02508","SJAG_01420","SJAG_01568","SJAG_03658","SJAG_02894","SJAG_01551","SJAG_01339","SJAG_04180","SJAG_01821","SJAG_04066","SJAG_00882","SJAG_02275","SJAG_02535","SJAG_00659","SJAG_04289","SJAG_00166","SJAG_00479","SJAG_04492","SJAG_01366","SJAG_03905","SJAG_05190","SJAG_04669","SJAG_05679","SJAG_01494","SJAG_01364","SJAG_03971","SJAG_01813","SJAG_03697","SJAG_02840","SJAG_00722","SJAG_02890","SJAG_00537","SJAG_03458","SJAG_04346","SJAG_02436","SJAG_04395","SJAG_01752","SJAG_01161"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63744,71915,72053,72073,73813,74586,74645,76000,76911,77859,78535,78635,78929,78943,79296,80093,81978,92205,102388,104829,105318,108921,110130,118117,118557,120948],"is_not":false,"summary":null,"term":"GO:0042273"},{"annotations":[114889,120931,57344,107948,109390,110975,117780,102643,118656,104440,117781,94667,94247,81294,105427,91469,102309,57991,102503,114126,112785,99870,101075],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[106039,73289,96839,93555],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[105975,96716,104441,106208,112712,89481,106741,112711,101359,93954,98958,106056,99871,118580,107157,118581],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[81297,77005,74230,80748,81178,73421,77186],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000470"},{"annotations":[72998,76623,99873,81562,75461,72126,74070,80537,99840,75281,77703,101953,75831,77029,62435,75117,80010,74096],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000463"},{"annotations":[109147,110345,113975,103200],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[74526,67329,64942,92888,73904,74184,92886,72875],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":93,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00231":null,"SJAG_00271":null,"SJAG_00323":null,"SJAG_00390":null,"SJAG_00479":null,"SJAG_00537":null,"SJAG_00659":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00882":null,"SJAG_00921":null,"SJAG_00932":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01364":null,"SJAG_01365":null,"SJAG_01366":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01551":null,"SJAG_01568":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01621":null,"SJAG_01752":null,"SJAG_01811":null,"SJAG_01813":null,"SJAG_01821":null,"SJAG_01839":null,"SJAG_01954":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02417":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02475":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02644":null,"SJAG_02745":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02890":null,"SJAG_02891":null,"SJAG_02894":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03155":null,"SJAG_03413":null,"SJAG_03425":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03658":null,"SJAG_03697":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03789":null,"SJAG_03905":null,"SJAG_03971":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04180":null,"SJAG_04289":null,"SJAG_04304":null,"SJAG_04308":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04414":null,"SJAG_04492":null,"SJAG_04562":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04890":null,"SJAG_04919":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05190":null,"SJAG_05223":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"ribosomal large subunit biogenesis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"ribosomal large subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042273","terms_by_termid":{"GO:0000027":null,"GO:0000448":null,"GO:0000463":null,"GO:0000470":null,"GO:0042273":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: PBO:0031495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_oxidative_stress","termid":"PBO:0031495"}


id: PBO:0048398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 5","termid":"PBO:0048398"}


id: PBO:0062830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSMR divergent transcript","termid":"PBO:0062830"}


id: PBO:0057107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 197","termid":"PBO:0057107"}


id: PBO:0068298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 5","termid":"PBO:0068298"}


id: FYPO:0001235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth in a cell population occurs to a lower extent than normal, i.e. the population stops growing earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth","termid":"FYPO:0000046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0005447","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"decreased extent of cell population growth","synonyms":[{"name":"reduced extent of cell population growth","type":"exact"}],"termid":"FYPO:0001235"}


id: PBO:0013026
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CMD1","termid":"PBO:0013026"}


id: PBO:0082717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the p24 complex; role in misfolded protein quality control; binds to GPI anchor proteins and mediates their efficient transport from the ER to the Golgi; integral membrane protein that associates with endoplasmic reticulum-derived COPII-coated vesicles","termid":"PBO:0082717"}


id: PBO:0039154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 1","termid":"PBO:0039154"}


id: PBO:0050982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 46","termid":"PBO:0050982"}


id: PBO:0044714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 1 (pseudogene)","termid":"PBO:0044714"}


id: MONDO:1010237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polymicrogyria that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymicrogyria, non-human animal","secondary_identifiers":["OMIA:001100"],"termid":"MONDO:1010237","xrefs":{"Monarch":{"xref_id":"1010237"}}}


id: MONDO:0011861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breath-holding Spells","secondary_identifiers":["OMIM:607578","UMLS:C0476287","MEDGEN:105400"],"synonyms":[{"name":"Bhs","type":"related"},{"name":"breath-holding Spells","type":"exact"}],"termid":"MONDO:0011861","xrefs":{"Monarch":{"xref_id":"0011861"}}}


id: MONDO:0015449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Criss cross heart (CCH) is a cardiac malformation where the inflow streams of the two ventricles cross due to twisting of the heart about its major axis. The clinical features depend on the particular cardiac defects associated, like simple or corrected transposition of the great arteries and ventricular septal defects.","definition_xrefs":["Orphanet:1461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"criss-cross heart","secondary_identifiers":["MESH:D003420","ICD9:746.89","SCTID:253269002","UMLS:C0010334","GARD:18724","MEDGEN:8181"],"synonyms":[{"name":"criss-cross atrioventricular relationships","type":"exact"},{"name":"superoinferior ventricles","type":"exact"},{"name":"twisted atrioventricular connections","type":"exact"}],"termid":"MONDO:0015449","xrefs":{"Monarch":{"xref_id":"0015449"}}}


id: GO:0106100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of geranylgeranyl pyrophosphate (GGPP) to yield the monocyclic diterpene beta-pinacene.","definition_xrefs":["GOC:rjd","PMID:28696553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-pinacene synthase activity","termid":"GO:0106100"}


id: MONDO:0850046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amniotic fluid embolism","secondary_identifiers":["GARD:22448","icd11.foundation:1017418792","UMLS:C0013927","Orphanet:617304","MEDGEN:8586"],"termid":"MONDO:0850046","xrefs":{"Monarch":{"xref_id":"0850046"}}}


id: PBO:0030867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytokinesis","termid":"PBO:0030867"}


id: PBO:0052052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANSL1L antisense RNA 1","termid":"PBO:0052052"}


id: MONDO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete giant cell glioblastoma (obsolete MONDO:0002502)","termid":"MONDO:0002502","xrefs":{"Monarch":{"xref_id":"0002502"}}}


id: MONDO:0000944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial occlusion","termid":"MONDO:0020673"},{"relation_name":"is_a","term_name":"cerebral artery stenosis","termid":"MONDO:1040016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral artery occlusion","secondary_identifiers":["ICD9:434","MEDGEN:507994","ICD9:434.91","UMLS:C0028790","SCTID:20059004","DOID:10127","ICD9:434.90","ICD9:434.9"],"termid":"MONDO:0000944","xrefs":{"Monarch":{"xref_id":"0000944"}}}


id: PBO:0027836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septum_disassembly","termid":"PBO:0027836"}


id: PBO:0074906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 77B","termid":"PBO:0074906"}


id: MONDO:1011737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic epidermolysis bullosa, non-human animal","secondary_identifiers":["OMIA:000341"],"termid":"MONDO:1011737","xrefs":{"Monarch":{"xref_id":"1011737"}}}


id: FYPO:0007112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process in which depolymerization (i.e. removal of tubulin dimers) of microtubules occurs at a lower rate, or speed, as part of centromere clustering during meiotic prophase I.","definition_xrefs":["PomBase:mah","PMID:23770679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization","termid":"FYPO:0007111"},{"relation_name":"is_a","term_name":"decreased microtubule depolymerisation involved in meitotic centromere clustering during meiotic prophase I","termid":"FYPO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization involved in meiotic centromere clustering during meiotic prophase I","synonyms":[{"name":"decreased microtubule depolymerisation speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule depolymerization speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule shrinkage shrinkage speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule shrinkage speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerisation involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerization involved in meiotic centromere clustering during prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerization involved in meiotic chromosome clustering during meiotic prophase I","type":"related"},{"name":"decreased rate of microtubule depolymerization involved in meiotic kinetochore retrieval during meiotic prophase I","type":"related"},{"name":"reduced rate of microtubule depolymerization involved in meiotic centromere clustering during meiotic prophase I","type":"exact"}],"termid":"FYPO:0007112"}


id: GO:0099064
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic endosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic endosome membrane (obsolete GO:0099064)","termid":"GO:0099064"}


id: GO:0035545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the nervous system with respect to the left and right halves.","definition_xrefs":["GOC:kmv","PMID:17717195","PMID:19641012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of left/right asymmetry in nervous system","termid":"GO:0035545"}


id: PBO:0029802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cables","termid":"PBO:0029802"}


id: PBO:0036039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction","termid":"PBO:0036039"}


id: GO:0003042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by carotid body-vasomotor excitation and results in a decrease in the diameter of an artery during the chemoreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0323031951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoconstriction of artery involved in chemoreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0002012"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid body chemoreceptor signaling","termid":"GO:0003027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in carotid body chemoreceptor response to lowering of systemic arterial blood pressure","synonyms":[{"name":"vasoconstriction of artery during carotid body chemoreceptor response to lowering of systemic arterial blood pressure","type":"related"}],"termid":"GO:0003042"}


id: GO:1901300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrogen peroxide-mediated programmed cell death.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901298"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide-mediated programmed cell death","synonyms":[{"name":"activation of hydrogen peroxide-mediated programmed cell death","type":"narrow"},{"name":"up regulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"up-regulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"upregulation of hydrogen peroxide-mediated programmed cell death","type":"exact"}],"termid":"GO:1901300"}


id: FYPO:0002283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, does not occur during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0002283)","synonyms":[{"name":"abolished protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"abolished protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"abolished protein tyrosine phosphorylation during cellular response to heat shock","type":"narrow"},{"name":"protein phosphorylation abolished during cellular response to heat","type":"exact"}],"termid":"FYPO:0002283"}


id: PBO:0028570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleotide-excision_repair_during_cellular_response_to_UV","termid":"PBO:0028570"}


id: PBO:0117121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 67 member 1","termid":"PBO:0117121"}


id: GO:0051485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terpenoids via isopentenyl diphosphate, synthesized by the mevalonate pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in terpenoid biosynthesis, and in mevalonate-dependent terpenoid biosynthesis, acetate, in the form of acetyl-CoA, is converted to isopentenyl diphosphate (IPP) through a series of mevalonate intermediates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"terpenoid biosynthetic process, mevalonate-dependent","synonyms":[{"name":"terpene biosynthesis, mevalonate-dependent","type":"narrow"},{"name":"terpene biosynthetic process, mevalonate-dependent","type":"narrow"},{"name":"terpenoid anabolism, mevalonate-dependent","type":"exact"},{"name":"terpenoid formation, mevalonate-dependent","type":"exact"},{"name":"terpenoid synthesis, mevalonate-dependent","type":"exact"}],"termid":"GO:0051485"}


id: GO:1904780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to centrosome.","definition_xrefs":["PMID:17115027","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to centrosome","termid":"GO:1904779"},{"relation_name":"negatively_regulates","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to centrosome","synonyms":[{"name":"down regulation of protein localisation to centrosome","type":"exact"},{"name":"down regulation of protein localization to centrosome","type":"exact"},{"name":"down-regulation of protein localisation to centrosome","type":"exact"},{"name":"down-regulation of protein localization to centrosome","type":"exact"},{"name":"downregulation of protein localisation to centrosome","type":"exact"},{"name":"downregulation of protein localization to centrosome","type":"exact"},{"name":"inhibition of protein localisation to centrosome","type":"narrow"},{"name":"inhibition of protein localization to centrosome","type":"narrow"},{"name":"negative regulation of protein localisation to centrosome","type":"exact"}],"termid":"GO:1904780"}


id: GO:0016817
data:
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id: MONDO:0002938
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A skin carcinoma displaying cytological characteristics intermediate to nodular basal cell carcinoma and squamous cell carcinoma.","definition_xrefs":["NCIT:C66903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"metatypical basal cell carcinoma","secondary_identifiers":["DOID:4281","SCTID:254702000","ICDO:8095/3"],"synonyms":[{"name":"basosquamous carcinoma of skin","type":"exact"},{"name":"skin metatypical basal cell carcinoma","type":"exact"},{"name":"skin metatypical carcinoma","type":"exact"}],"termid":"MONDO:0002938","xrefs":{"Monarch":{"xref_id":"0002938"}}}


id: GO:0071928
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of tyramine binding to a cell surface receptor.","definition_xrefs":["PMID:15355245","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octopamine or tyramine signaling pathway","termid":"GO:0007211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"tyramine signaling pathway","synonyms":[{"name":"tyramine signalling pathway","type":"exact"}],"termid":"GO:0071928"}


id: PBO:0065317
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 40B (pseudogene)","termid":"PBO:0065317"}


id: SO:0000689
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cDNA_match","synonyms":[{"name":"cDNA match","type":"exact"}],"termid":"SO:0000689"}


id: MONDO:0014613
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pulmonary fibrosis and/or bone marrow failure, Telomere-related in which the cause of the disease is a mutation in the RTEL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete idiopathic pulmonary fibrosis (obsolete MONDO:0008345)","termid":"MONDO:0008345"},{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"},{"relation_name":"is_a","term_name":"dyskeratosis congenita and related telomere biology disorder","termid":"MONDO:0800467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 3","secondary_identifiers":["GARD:16098","OMIM:616373","UMLS:C4225346","MEDGEN:901644"],"synonyms":[{"name":"PFBMFT3","type":"related"},{"name":"RTEL1 pulmonary fibrosis and/or bone marrow failure, Telomere-related","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 3","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related caused by mutation in RTEL1","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 3","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 3","type":"exact"}],"termid":"MONDO:0014613","xrefs":{"Monarch":{"xref_id":"0014613"}}}


id: PBO:0052287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like ECH associated protein 1","termid":"PBO:0052287"}


id: GO:0071319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benzoic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to benzoic acid","termid":"GO:0080021"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to benzoic acid","termid":"GO:0071319"}


id: GO:0043552
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylinositol 3-kinase activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol 3-kinase activity (obsolete GO:0043552)","synonyms":[{"name":"activation of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"positive regulation of phosphoinositide 3-kinase activity","type":"exact"},{"name":"stimulation of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"up regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"up-regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"upregulation of phosphatidylinositol 3-kinase activity","type":"exact"}],"termid":"GO:0043552"}


id: PBO:0079658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 6","termid":"PBO:0079658"}


id: PBO:0028855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_glucose_starvation","termid":"PBO:0028855"}


id: MONDO:0018455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis of genetic origin with limb anomaly as a major feature (obsolete MONDO:0018455)","secondary_identifiers":["Orphanet:404571"],"termid":"MONDO:0018455","xrefs":{"Monarch":{"xref_id":"0018455"}}}


id: MONDO:0800413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisocial behavior, susceptibility to","secondary_identifiers":["MEDGEN:934798","UMLS:C4310831"],"termid":"MONDO:0800413","xrefs":{"Monarch":{"xref_id":"0800413"}}}


id: FYECO:0000147
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  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing sucrose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrose MM","synonyms":[{"name":"sucrose minimal medium","type":"exact"}],"termid":"FYECO:0000147"}


id: PBO:0073197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectin P ligand","termid":"PBO:0073197"}


id: PBO:0081283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 66","termid":"PBO:0081283"}


id: SO:0001363
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_aminomethyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_aminomethyl_two_thiouridine","secondary_identifiers":["RNAMOD:071"],"synonyms":[{"name":"5-aminomethyl-2-thiouridine","type":"exact"},{"name":"five aminomethyl two thiouridine","type":"exact"},{"name":"nm5s2U","type":"exact"}],"termid":"SO:0001363"}


id: PBO:0109125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basonuclin zinc finger protein 1","termid":"PBO:0109125"}


id: GO:0141087
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"regulation of inflammasome-mediated signaling pathway","termid":"GO:0141085"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"positive regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141087"}


id: FYPO:0009114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle remains monopolar when formed, with microtubules emanating from only one pole, for longer than wild-type, but eventually reaches bipolarity.","definition_xrefs":["PMID:25057016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar mitotic spindle","termid":"FYPO:0000276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000337","FYPO:0002399","FYPO:0001985","FYPO:0000120","FYPO:0000641","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"transient monopolar mitotic spindle","synonyms":[{"name":"monopolar mitotic spindle that eventually reaches bipolarity","type":"exact"},{"name":"temporary monopolar mitotic spindle","type":"exact"}],"termid":"FYPO:0009114"}


id: PBO:0043031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHMP4A pseudogene 1","termid":"PBO:0043031"}


id: GO:0008628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of a hormone, and which triggers the apoptotic signaling pathway in a cell. The pathway starts with reception of a hormone signal, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:bf","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"hormone-mediated apoptotic signaling pathway","synonyms":[{"name":"apoptotic signaling pathway in response to hormone","type":"related"},{"name":"induction of apoptosis by hormones","type":"related"}],"termid":"GO:0008628"}


id: PR:O74759
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nto1 gene.","definition_xrefs":["UniProtKB:O74759","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mst2 complex subunit nto1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.04c","synonyms":[{"name":"Spom972h-nto1","type":"exact"}],"termid":"PR:O74759"}


id: PBO:0091138
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, human C6orf136 ortholog","termid":"PBO:0091138"}


id: RO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between a neuron that is synapsed_to another neuron or a neuron that is connected indirectly to another by a chain of neurons, each synapsed_to the next.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_neural_circuit_with","termid":"RO:0000300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_in_neural_circuit_with","termid":"RO:0000302"}


id: MONDO:0007047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrokeratoelastoidosis of Costa is a rare dermatosis characterized by small, firm papules or plaques (resembling warts) on the sides of the hands and feet. These stationary and asymptomatic lesions appear generally at puberty, or sometimes later","definition_xrefs":["Orphanet:38"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acquired dermis elastic tissue disorder with increased elastic tissue (obsolete MONDO:0016436)","termid":"MONDO:0016436"},{"relation_name":"is_a","term_name":"punctate palmoplantar keratoderma","termid":"MONDO:0017675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate palmoplantar keratoderma type III","secondary_identifiers":["DOID:0060362","EFO:1000758","MEDGEN:107467","MESH:C535653","GARD:125","OMIM:101850","UMLS:C0545044"],"synonyms":[{"name":"AKE","type":"exact"},{"name":"NTIA","type":"related"},{"name":"PPKP3","type":"exact"},{"name":"TIA","type":"related"},{"name":"acrokeratoelastoidosis","type":"related"},{"name":"acrokeratoelastoidosis of Costa","type":"exact"},{"name":"aganglionosis, total colonic","type":"related"},{"name":"ake","type":"exact"},{"name":"collagenous plaques of hand and feet","type":"related"},{"name":"collagenous plaques of hands and feet","type":"related"},{"name":"keratoderma, palmoplantar, punctate type 3","type":"exact"},{"name":"near-total intestinal aganglionosis","type":"related"},{"name":"palmoplantar keratoderma, punctate type 3","type":"related"},{"name":"palmoplantar keratoderma, punctate type III","type":"related"},{"name":"punctate palmoplantar hyperkeratosis type 3","type":"exact"},{"name":"punctate palmoplantar keratoderma type 3","type":"exact"},{"name":"rare form of Hirschsprung's disease","type":"related"}],"termid":"MONDO:0007047","xrefs":{"Monarch":{"xref_id":"0007047"}}}


id: PBO:0041105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSN antisense RNA 1","termid":"PBO:0041105"}


id: PBO:0079066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 2-1","termid":"PBO:0079066"}


id: PBO:0050360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 63","termid":"PBO:0050360"}


id: PR:Q9UTQ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1502 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTQ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.07c","synonyms":[{"name":"Spom972h-rps1502","type":"exact"}],"termid":"PR:Q9UTQ6"}


id: GO:1903224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endodermal cell differentiation.","definition_xrefs":["PMID:23154389","GO_REF:0000058","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endodermal cell differentiation","synonyms":[{"name":"regulation of endoderm cell differentiation","type":"exact"}],"termid":"GO:1903224"}


id: MONDO:0971035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland carcinoma containing a medullary carcinoma component that is immunohistochemically positive for calcitonin, and follicular cell-derived carcinoma component that is immunohistochemically positive for thyroglobulin.","definition_xrefs":["DOID:0081459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland mixed medullary and follicular cell-derived carcinoma","secondary_identifiers":["MEDGEN:1815194","UMLS:C5706289"],"termid":"MONDO:0971035","xrefs":{"Monarch":{"xref_id":"0971035"}}}


id: PBO:0031673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_secretion","termid":"PBO:0031673"}


id: MOD:00304
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to L-leucine methyl ester.","definition_xrefs":["Unimod:34#C-term","PubMed:11875433","PubMed:10191253","PubMed:8206937","RESID:AA0299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated leucine","termid":"MOD:00662"},{"relation_name":"is_a","term_name":"alpha-carboxyl methylated residue","termid":"MOD:01689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-leucine methyl ester","synonyms":[{"name":"2-amino-4-methylpentanoic methyl ester","type":"exact"},{"name":"L-leucine methyl ester","type":"exact"},{"name":"MOD_RES Leucine methyl ester","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"OMeLeu","type":"exact"},{"name":"alpha-aminoisocaproic methyl ester","type":"exact"},{"name":"methyl (2S)-2-amino-4-methylpentanoate","type":"exact"},{"name":"methyl L-leucinate","type":"exact"},{"name":"methyl esterified L-leucine","type":"exact"}],"termid":"MOD:00304"}


id: MONDO:0003091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"},{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"cutaneous mucoepidermoid carcinoma","secondary_identifiers":["SCTID:254713002","UMLS:C0346019","DOID:4683","MEDGEN:91072","NCIT:C4472"],"synonyms":[{"name":"mucoepidermoid skin carcinoma","type":"exact"},{"name":"zone of skin mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0003091","xrefs":{"Monarch":{"xref_id":"0003091"}}}


id: FYPO:0007653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 is decreased at heterochromatin islands near genes that are normally expressed during the meiotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:32269268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007653"}


id: PBO:0063478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 6","termid":"PBO:0063478"}


id: GO:0047147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5,6,7,8-tetrahydrofolate + trimethylsulfonium = (6S)-5-methyl-5,6,7,8-tetrahydrofolate + dimethyl sulfide + H+.","definition_xrefs":["EC:2.1.1.19","RHEA:13693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"trimethylsulfonium-tetrahydrofolate N-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.19-RXN","KEGG_REACTION:R02573"],"synonyms":[{"name":"trimethylsulfonium-tetrahydrofolate methyltransferase activity","type":"related"},{"name":"trimethylsulfonium:tetrahydrofolate N-methyltransferase activity","type":"related"},{"name":"trimethylsulphonium-tetrahydrofolate N-methyltransferase activity","type":"exact"}],"termid":"GO:0047147"}


id: MONDO:0009308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-negative","secondary_identifiers":["UMLS:C1856255","MESH:C565533","GARD:15175","OMIM:233690","DOID:0070193","MEDGEN:383872","NANDO:2201280"],"synonyms":[{"name":"CGD due to deficiency of the Alpha Subunit of cytochrome B","type":"related"},{"name":"CGD, autosomal recessive cytochrome B-negative","type":"related"},{"name":"Cyba deficiency","type":"related"},{"name":"chronic granulomatous disease 4, autosomal recessive","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-negative","type":"exact"}],"termid":"MONDO:0009308","xrefs":{"Monarch":{"xref_id":"0009308"}}}


id: PATO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An affinity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased affinity","termid":"PATO:0002071"}


id: MONDO:0009076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder caused by mutations in the GJB2 gene, encoding gap junction beta-2 protein. The condition is characterized by profound sensorineural hearing loss and may be associated with vestibular dysfunction.","definition_xrefs":["NCIT:C129022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 1A","secondary_identifiers":["UMLS:C2673759","OMIM:220290","MEDGEN:388720","DOID:0110475","GARD:1697","MESH:C567134"],"synonyms":[{"name":"DFNB1","type":"narrow"},{"name":"DFNB1A","type":"narrow"},{"name":"GJB2-related deafness","type":"narrow"},{"name":"autosomal recessive deafness 1A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 1A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 1A","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 1A","type":"exact"},{"name":"connexin 26 deafness","type":"narrow"},{"name":"deafness nonsyndromic, connexin 26 linked","type":"narrow"},{"name":"deafness, autosomal recessive 1A","type":"narrow"},{"name":"deafness, autosomal recessive 1a, autosomal recessive, digenic dominant","type":"narrow"},{"name":"deafness, autosomal recessive type 1A","type":"narrow"},{"name":"deafness, digenic GJB2/GJB6, Autosomal recessive, Digenic dominant","type":"exact"},{"name":"deafness, digenic, GJB2/GJB3","type":"narrow"},{"name":"deafness, digenic, GJB2/GJB3, Autosomal recessive, Digenic dominant","type":"exact"},{"name":"deafness, digenic, GJB2/GJB6","type":"narrow"}],"termid":"MONDO:0009076","xrefs":{"Monarch":{"xref_id":"0009076"}}}


id: SO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inversion site found on the Saccharomyces cerevisiae 2 micron plasmid.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_site","termid":"SO:0000948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRT_site","synonyms":[{"name":"FLP recombination target region","type":"exact"},{"name":"FRT site","type":"exact"}],"termid":"SO:0000350"}


id: MONDO:0100372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peroxisomal single enzyme/protein defect that disrupts peroxisomal transport.","definition_xrefs":["PMID:26611709","MONDO:patterns/specific_disease_by_disrupted_process","PMID:17055078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal single enzyme/protein defect","termid":"MONDO:0100257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"disorder of peroxisomal transporter","synonyms":[{"name":"disorder of peroxisomal transporter defect","type":"exact"}],"termid":"MONDO:0100372","xrefs":{"Monarch":{"xref_id":"0100372"}}}


id: PBO:0068290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease L","termid":"PBO:0068290"}


id: PBO:0082070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; also functions as an alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); localizes to the cytoplasm; SER33 has a paralog, SER3, that arose from the whole genome duplication","termid":"PBO:0082070"}


id: GO:0051418
data:
  {"annotated_genes":["SJAG_02886","SJAG_01756","SJAG_02761","SJAG_03540","SJAG_00856","SJAG_02737","SJAG_07018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[102289,102898,108397,101992,119202,118956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051415"},{"annotations":[102899,120695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, mediated by the microtubule organizing center.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0065003","GO:0000226","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"microtubule nucleation by microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MTOC-mediated microtubule nucleation","type":"exact"},{"name":"microtubule nucleation by MTOC","type":"exact"},{"name":"microtubule nucleation by microtubule organising centre","type":"exact"},{"name":"microtubule organizing center-mediated microtubule nucleation","type":"exact"}],"termid":"GO:0051418","terms_by_termid":{"GO:0030954":null,"GO:0051415":null,"GO:0051417":null}}


id: GO:0072506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of trivalent inorganic anions within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete trivalent inorganic anion homeostasis (obsolete GO:0072506)","termid":"GO:0072506"}


id: GO:0030106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A major histocompatibility complex class I receptor. These display processed antigens from the endocytosed bacteria. MHC class I proteins can form complexes with processed antigen peptides only if the antigen is synthesized in the same cell. As a consequence, T lymphocytes can only bind to class-I-positive cells that are synthesizing the antigen (e.g. virus-infected cells).","definition_xrefs":["ISBN:081533642X","ISBN:0879694971"],"gene_count":0,"genotype_count":0,"name":"obsolete MHC class I receptor activity (obsolete GO:0030106)","synonyms":[{"name":"MHC class I receptor activity","type":"exact"},{"name":"class I major histocompatibility complex antigen","type":"related"},{"name":"major histocompatibility complex class I receptor","type":"exact"}],"termid":"GO:0030106"}


id: PBO:0042578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2D","termid":"PBO:0042578"}


id: MONDO:0044956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma that arises from the paranasal sinus. It is characterized by the presence of epidermoid cells, mucus producing cells, and cells of intermediate type.","definition_xrefs":["NCIT:C6018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paranasal sinus mucoepidermoid carcinoma","secondary_identifiers":["MEDGEN:235461","UMLS:C1335340"],"synonyms":[{"name":"accessory sinus mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of accessory sinus","type":"exact"},{"name":"mucoepidermoid carcinoma of paranasal sinus","type":"exact"},{"name":"mucoepidermoid carcinoma of the accessory sinus","type":"exact"},{"name":"mucoepidermoid carcinoma of the paranasal sinus","type":"exact"},{"name":"paranasal sinus mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0044956","xrefs":{"Monarch":{"xref_id":"0044956"}}}


id: PBO:0067585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 744, pseudogene","termid":"PBO:0067585"}


id: PBO:0089502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain binding protein, transcription coregulator","termid":"PBO:0089502"}


id: GO:0034508
data:
  {"annotated_genes":["SJAG_03619","SJAG_02908","SJAG_03048","SJAG_02513","SJAG_02465","SJAG_02303","SJAG_04038","SJAG_05273","SJAG_03905","SJAG_02872","SJAG_00718","SJAG_01837","SJAG_00045","SJAG_00307","SJAG_00756","SJAG_03217","SJAG_03183","SJAG_04177","SJAG_05321","SJAG_01611","SJAG_00684","SJAG_04547","SJAG_02119","SJAG_04696","SJAG_03220","SJAG_04581","SJAG_03867","SJAG_04989","SJAG_02664","SJAG_00873","SJAG_04638"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90710,120883,116220,101035,96572,115103,91905,108311,109297,101287,117082,120847,103982,94653,104828,118471,119707,73117,97353,81643],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034080"},{"annotations":[57291,65609,67552,68008,81710,92626,107415],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051382"},{"annotations":[119962],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[104293,118680,91494],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex. Includes the formation of the chromatin structures which form a platform for the kinetochore, and assembly of the kinetochore onto this specialized chromatin. In fission yeast and higher eukaryotes this process also includes the formation of heterochromatin at the outer repeat (pericentric) regions of the centromere.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"},{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00307":null,"SJAG_00684":null,"SJAG_00718":null,"SJAG_00756":null,"SJAG_00873":null,"SJAG_01611":null,"SJAG_01837":null,"SJAG_02119":null,"SJAG_02303":null,"SJAG_02465":null,"SJAG_02513":null,"SJAG_02664":null,"SJAG_02872":null,"SJAG_02908":null,"SJAG_03048":null,"SJAG_03183":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03619":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_04038":null,"SJAG_04177":null,"SJAG_04547":null,"SJAG_04581":null,"SJAG_04638":null,"SJAG_04696":null,"SJAG_04989":null,"SJAG_05273":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"centromere complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"centromere assembly","type":"exact"},{"name":"centromere organization","type":"exact"},{"name":"chromosome, centromeric region assembly","type":"exact"}],"termid":"GO:0034508","terms_by_termid":{"GO:0034080":null,"GO:0051382":null,"GO:1905560":null,"GO:1905561":null}}


id: FYPO:0006549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which gene expression occurs to a lower extent than normal. One or more parts of gene expression, such as transcription or translation, may be affected, and all genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased gene expression","synonyms":[{"name":"reduced gene expression","type":"exact"}],"termid":"FYPO:0006549"}


id: GO:0048886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuromast hair cell. Hair cells are the sensory receptors of the neuromast and are located in a portion of the neuromast called the sensory strip. Each hair cell of the neuromast is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface. There are approximately seven hair cells within each neuromast, with each hair cell innervated by afferent and efferent neurons.","definition_xrefs":["CL:0000856","ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cell differentiation","termid":"GO:0035315"},{"relation_name":"is_a","term_name":"mechanoreceptor differentiation","termid":"GO:0042490"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast hair cell differentiation","termid":"GO:0048886"}


id: MONDO:0018142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe neonatal pyruvate carboxylase (PC) deficiency (Type B) is a rare, extremely severe form of PC deficiency characterized by severe, early-onset metabolic acidosis, and a generally fatal outcome in early infancy.","definition_xrefs":["Orphanet:353314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate carboxylase deficiency disease","termid":"MONDO:0009949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"pyruvate carboxylase deficiency, severe neonatal type","secondary_identifiers":["GARD:17537","MEDGEN:1842956","UMLS:C5679929"],"synonyms":[{"name":"pyruvate carboxylase deficiency type B","type":"exact"}],"termid":"MONDO:0018142","xrefs":{"Monarch":{"xref_id":"0018142"}}}


id: PBO:0040117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 4","termid":"PBO:0040117"}


id: PBO:0002290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm6 (predicted)","termid":"PBO:0002290"}


id: MONDO:1012535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy and juvenile mortality, non-human animal","termid":"MONDO:1011651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and juvenile mortality, dog","secondary_identifiers":["OMIA:002256-9615"],"termid":"MONDO:1012535","xrefs":{"Monarch":{"xref_id":"1012535"}}}


id: GO:1904135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in rhombomere morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:24892953","GO_REF:0000058","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in rhombomere morphogenesis","termid":"GO:1904133"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in rhombomere morphogenesis","termid":"GO:1904125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in rhombomere morphogenesis","synonyms":[{"name":"activation of convergent extension involved in rhombomere morphogenesis","type":"narrow"},{"name":"up regulation of convergent extension involved in rhombomere morphogenesis","type":"exact"},{"name":"up-regulation of convergent extension involved in rhombomere morphogenesis","type":"exact"},{"name":"upregulation of convergent extension involved in rhombomere morphogenesis","type":"exact"}],"termid":"GO:1904135"}


id: PBO:0041868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 16, pseudogene","termid":"PBO:0041868"}


id: SO:0000798
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"TE that has been modified by manipulations in vitro.","definition_xrefs":["FB:mc"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_transposable_element","synonyms":[{"name":"engineered transposable element","type":"exact"}],"termid":"SO:0000798"}


id: PBO:0073753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 8","termid":"PBO:0073753"}


id: MONDO:0015556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"maculopapular cutaneous mastocytosis","termid":"MONDO:0019316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"nodular urticaria pigmentosa","secondary_identifiers":["UMLS:C5680684","MEDGEN:1843440","GARD:20035","Orphanet:158772"],"termid":"MONDO:0015556","xrefs":{"Monarch":{"xref_id":"0015556"}}}


id: PATO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process inhering in a bearer by virtue of the bearer's having slow progressive course of indefinite duration.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic","termid":"PATO:0001863"}


id: GO:0000171
data:
  {"annotated_genes":["SJAG_03952","SJAG_01551","SJAG_02553","SJAG_04916","SJAG_00955","SJAG_06613","SJAG_03425","SJAG_01623","SJAG_04582","SJAG_02547","SJAG_03796","SJAG_03234"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72983,96587,98394,98683,106493,106712,107603,107604,115484,117310,117397,120627],"is_not":false,"summary":null,"term":"GO:0000171"}]},"cv_name":"molecular_function","definition":"Catalysis of the site-specific cleavage of RNA by a catalytic RNA-mediated mechanism; substrates include the A3 site in the ITS1 of pre-rRNA.","definition_xrefs":["PMID:17881380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00955":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0140098","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"ribonuclease MRP activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:RNase_MRP"],"synonyms":[{"name":"RNase MRP","type":"exact"}],"termid":"GO:0000171","terms_by_termid":{"GO:0000171":null}}


id: PBO:0062278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 14","termid":"PBO:0062278"}


id: PBO:0048614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 6","termid":"PBO:0048614"}


id: MOD:01414
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to an hydroxylated isoleucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated isoleucine","synonyms":[{"name":"HyIle","type":"exact"}],"termid":"MOD:01414"}


id: PBO:0054459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1856","termid":"PBO:0054459"}


id: PR:Q9C0U3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug153 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0U3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 153 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.19","synonyms":[{"name":"Spom972h-mug153","type":"exact"}],"termid":"PR:Q9C0U3"}


id: GO:0051360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP506 chromophore cross-link from the alpha-carboxyl carbon of residue n, an asparagine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["PMID:10504696","RESID:AA0380"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-asparagine 5-imidazolinone glycine (obsolete GO:0051360)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via L-asparagine 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via L-asparagine 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051360"}


id: MONDO:0014997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the MAPKBP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 20","secondary_identifiers":["GARD:18181","DOID:0111127","MEDGEN:934607","OMIM:617271","UMLS:C4310640"],"synonyms":[{"name":"MAPKBP1 nephronophthisis (disease)","type":"exact"},{"name":"NPHP20","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in MAPKBP1","type":"exact"},{"name":"nephronophthisis 20","type":"exact"},{"name":"nephronophthisis type 20","type":"exact"}],"termid":"MONDO:0014997","xrefs":{"Monarch":{"xref_id":"0014997"}}}


id: PBO:0044323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 3","termid":"PBO:0044323"}


id: PBO:0091204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu","termid":"PBO:0091204"}


id: PATO:0002138
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to being fit to be eaten.","definition_xrefs":["PATOC:VO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edibility","synonyms":[{"name":"edibleness","type":"exact"}],"termid":"PATO:0002138"}


id: PBO:0004254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m7G(5')pppN diphosphatase (predicted)","termid":"PBO:0004254"}


id: MOD:01350
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:320#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolyzed N-ethylmaleimide adduct","termid":"MOD:00631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolyzed N-ethylmaleimide lysine adduct","synonyms":[{"name":"Nethylmaleimide+water","type":"related"},{"name":"Nethylmaleimidehydrolysis","type":"related"}],"termid":"MOD:01350"}


id: MONDO:0958226
data:
  {"annotated_genes":["SJAG_02896"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88935],"is_not":false,"summary":null,"term":"MONDO:0958226"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy, porphyria-related","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620711","MEDGEN:1862491","UMLS:C5935575"],"termid":"MONDO:0958226","terms_by_termid":{"MONDO:0958226":null},"xrefs":{"Monarch":{"xref_id":"0958226"}}}


id: GO:0106098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts both as N-acetylglutamate synthase (NAGS) catalysing the production of N-Acetylglutamate from glutamate and acetyl-CoA, and as N-acetylglutamate kinase (NAGK) catalysing the reaction ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamyl 5-phosphate.","definition_xrefs":["GOC:lnp","PMID:11553611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetyltransferase complex","termid":"GO:0031248"},{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"NAGS/NAGK complex","termid":"GO:0106098"}


id: PBO:0091132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial LYR family protein","termid":"PBO:0091132"}


id: MONDO:0006184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The co-existence of ductal and lobular carcinoma in situ in the breast, without evidence of stromal invasion.","definition_xrefs":["NCIT:C4195"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"breast ductal adenocarcinoma","termid":"MONDO:0005590"},{"relation_name":"is_a","term_name":"breast carcinoma in situ","termid":"MONDO:0004658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ductal breast carcinoma in situ and lobular carcinoma in situ","secondary_identifiers":["MEDGEN:83137","ICDO:8522/2","UMLS:C0334383","EFO:1000221"],"synonyms":[{"name":"DCIS and LCIS of breast","type":"exact"},{"name":"DCIS and LCIS of the breast","type":"exact"},{"name":"ductal and lobular breast carcinoma in situ","type":"exact"},{"name":"ductal and lobular carcinoma in situ of breast","type":"exact"},{"name":"ductal and lobular carcinoma in situ of the breast","type":"exact"},{"name":"ductal carcinoma in situ with lobular carcinoma in situ of breast","type":"exact"},{"name":"ductal carcinoma in situ with lobular carcinoma in situ of the breast","type":"exact"},{"name":"intraductal and lobular breast carcinoma in situ","type":"exact"},{"name":"intraductal and lobular carcinoma in situ of breast","type":"exact"},{"name":"intraductal and lobular carcinoma in situ of the breast","type":"exact"},{"name":"intraductal carcinoma and lobular carcinoma in situ","type":"exact"},{"name":"non-infiltrating ductal and non-infiltrating lobular breast carcinoma","type":"exact"},{"name":"non-infiltrating ductal with non-infiltrating lobular carcinoma of breast","type":"exact"},{"name":"non-infiltrating ductal with non-infiltrating lobular carcinoma of the breast","type":"exact"},{"name":"non-invasive ductal and non-invasive lobular breast carcinoma","type":"exact"},{"name":"non-invasive ductal and non-invasive lobular carcinoma","type":"exact"},{"name":"non-invasive ductal breast carcinoma with non-invasive lobular breast carcinoma","type":"exact"},{"name":"non-invasive ductal carcinoma with non-invasive lobular carcinoma of breast","type":"exact"},{"name":"non-invasive ductal carcinoma with non-invasive lobular carcinoma of the breast","type":"exact"},{"name":"non-invasive ductal with non-invasive lobular breast carcinoma","type":"exact"}],"termid":"MONDO:0006184","xrefs":{"Monarch":{"xref_id":"0006184"}}}


id: PBO:0081380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 221","termid":"PBO:0081380"}


id: MONDO:0018066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy X is a sex chromosome anomaly with a variable phenotype caused by the presence of an extra X chromosome in females (47,XXX instead of 46,XX).","definition_xrefs":["Orphanet:3375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"trisomy X","secondary_identifiers":["icd11.foundation:423644907","MEDGEN:113140","MESH:C535318","UMLS:C0221033","NORD:1798","GARD:5672","NCIT:C129718","SCTID:35111009"],"synonyms":[{"name":"47 XXX syndrome","type":"related"},{"name":"47,XXX","type":"exact"},{"name":"47,XXX syndrome","type":"exact"},{"name":"Triplo X syndrome","type":"related"},{"name":"Triplo-X syndrome","type":"exact"},{"name":"XXX syndrome","type":"exact"},{"name":"triple X syndrome","type":"exact"},{"name":"triple-X chromosome syndrome","type":"related"},{"name":"triple-X female","type":"related"},{"name":"trisomy X","type":"exact"},{"name":"trisomy type X","type":"exact"}],"termid":"MONDO:0018066","xrefs":{"Monarch":{"xref_id":"0018066"}}}


id: PBO:0034678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CRE_promoter_during_cellular_response_to_miconazole","termid":"PBO:0034678"}


id: GO:0035773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin, in response to a glucose stimulus.","definition_xrefs":["PMID:8492079","GOC:bf","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin secretion","termid":"GO:0030073"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"cellular response to glucose stimulus","termid":"GO:0071333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"insulin secretion involved in cellular response to glucose stimulus","synonyms":[{"name":"insulin secretion involved in cellular response to glucose","type":"exact"}],"termid":"GO:0035773"}


id: FYPO:0001008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the actomyosin contractile ring is absent from the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"actomyosin contractile ring absent","synonyms":[{"name":"actomyosin contractile ring absent during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring absent during vegetative growth","type":"exact"},{"name":"actomyosin contractile ring absent from cell","type":"exact"},{"name":"actomyosin contractile ring actin absent","type":"narrow"},{"name":"contractile ring absent","type":"exact"},{"name":"cytokinetic contractile ring absent","type":"exact"}],"termid":"FYPO:0001008"}


id: MONDO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises from the breast. Representative examples include angiosarcoma, liposarcoma, leiomyosarcoma, rhabdomyosarcoma, and extraskeletal osteosarcoma.","definition_xrefs":["NCIT:C4670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast cancer","termid":"MONDO:0007254"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast sarcoma","secondary_identifiers":["UMLS:C0349667","DOID:3017","MEDGEN:87613","ONCOTREE:PBS","SCTID:278050001"],"synonyms":[{"name":"PBS","type":"related"},{"name":"breast sarcoma","type":"exact"},{"name":"sarcoma of breast","type":"exact"},{"name":"sarcoma of the breast","type":"exact"}],"termid":"MONDO:0002490","xrefs":{"Monarch":{"xref_id":"0002490"}}}


id: GO:0021992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of expansion of cell numbers in the neural plate due to cell division of progenitor cells preferentially in the rostrocaudal direction, resulting in the elongation of the tissue.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","PMID:15806586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"neural plate elongation","termid":"GO:0014022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in neural plate elongation","termid":"GO:0021992"}


id: GO:0032811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epinephrine secretion","termid":"GO:0014060"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine secretion","termid":"GO:0033604"},{"relation_name":"negatively_regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of epinephrine secretion","synonyms":[{"name":"down regulation of epinephrine secretion","type":"exact"},{"name":"down-regulation of epinephrine secretion","type":"exact"},{"name":"downregulation of epinephrine secretion","type":"exact"},{"name":"inhibition of epinephrine secretion","type":"narrow"},{"name":"negative regulation of adrenaline secretion","type":"exact"}],"termid":"GO:0032811"}


id: PBO:0048431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta 2","termid":"PBO:0048431"}


id: PBO:0027307
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_rDNA","termid":"PBO:0027307"}


id: GO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-benzoylagmatine + H2O = agmatine + benzoate.","definition_xrefs":["RHEA:15065","EC:3.5.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acylagmatine amidase activity","secondary_identifiers":["MetaCyc:ACYLAGMATINE-AMIDASE-RXN","KEGG_REACTION:R01425"],"synonyms":[{"name":"acylagmatine amidohydrolase activity","type":"related"},{"name":"acylagmatine deacylase activity","type":"related"},{"name":"benzoylagmatine amidohydrolase activity","type":"related"}],"termid":"GO:0047618"}


id: GO:0052014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of protein macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host protein (obsolete GO:0052014)","synonyms":[{"name":"catabolism by organism of host protein","type":"exact"}],"termid":"GO:0052014"}


id: GO:0005537
data:
  {"annotated_genes":["SJAG_01991","SJAG_02839","SJAG_03535","SJAG_04571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81042,112725,115760,120549],"is_not":false,"summary":null,"term":"GO:0005537"}]},"cv_name":"molecular_function","definition":"Binding to mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans.","definition_xrefs":["GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01991":null,"SJAG_02839":null,"SJAG_03535":null,"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"D-mannose binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-947991"],"synonyms":[{"name":"mannose binding","type":"broad"},{"name":"mannose binding lectin","type":"related"}],"termid":"GO:0005537","terms_by_termid":{"GO:0005537":null}}


id: PBO:0081043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing, antiviral 1 like","termid":"PBO:0081043"}


id: PBO:0050893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediate early response 5","termid":"PBO:0050893"}


id: PBO:0072390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 16","termid":"PBO:0072390"}


id: FYPO:0003528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the actomyosin contractile ring is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to actomyosin contractile ring","synonyms":[{"name":"ectopic protein localization to actomyosin contractile ring","type":"exact"},{"name":"protein mislocalised to actomyosin contractile ring","type":"exact"},{"name":"protein mislocalised to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"protein mislocalized to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytokinetic contractile ring","type":"exact"},{"name":"protein mislocalized to mitotic contractile ring","type":"exact"}],"termid":"FYPO:0003528"}


id: FYPO:0006024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments is normal (i.e. indistinguishable from wild type). The relevant actin-binding protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000257"],"is_obsolete":false,"name":"normal actin filament binding","synonyms":[{"name":"normal F-actin binding","type":"exact"},{"name":"normal filamentous actin binding","type":"exact"}],"termid":"FYPO:0006024"}


id: GO:0010787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of inter-Golgi cisterna transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COPI coating of Golgi vesicle","termid":"GO:0048205"},{"relation_name":"part_of","term_name":"vesicle targeting, inter-Golgi cisterna","termid":"GO:0048204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"COPI coating of Golgi vesicle, inter-Golgi cisterna","termid":"GO:0010787"}


id: FYECO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with adenine as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, adenine nitrogen source","termid":"FYECO:0000274"}


id: PBO:0058839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8069","termid":"PBO:0058839"}


id: MONDO:0100362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any herpes simplex type 2 infectious disease that involves the lip.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes labialis","termid":"MONDO:0043653"},{"relation_name":"is_a","term_name":"herpes simplex type 2 infectious disease","termid":"MONDO:0100360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lip herpes simplex type 2 infectious disorder","termid":"MONDO:0100362","xrefs":{"Monarch":{"xref_id":"0100362"}}}


id: PBO:0089250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor, Noc1 related","termid":"PBO:0089250"}


id: PBO:0048953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 4","termid":"PBO:0048953"}


id: MONDO:0021238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the cornea.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cornea neoplasm","secondary_identifiers":["NCIT:C4361","UMLS:C0339304","MEDGEN:90940"],"synonyms":[{"name":"cornea neoplasm (disease)","type":"exact"},{"name":"cornea tumor","type":"exact"},{"name":"cornea tumour","type":"exact"},{"name":"corneal neoplasm","type":"exact"},{"name":"corneal tumor","type":"exact"},{"name":"corneal tumour","type":"exact"},{"name":"neoplasm of cornea","type":"exact"},{"name":"neoplasm of the cornea","type":"exact"},{"name":"tumor of cornea","type":"exact"},{"name":"tumor of the cornea","type":"exact"},{"name":"tumour of cornea","type":"exact"},{"name":"tumour of the cornea","type":"exact"}],"termid":"MONDO:0021238","xrefs":{"Monarch":{"xref_id":"0021238"}}}


id: PBO:0060427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGFI-A binding protein 2","termid":"PBO:0060427"}


id: GO:0045454
data:
  {"annotated_genes":["SJAG_03166","SJAG_04553","SJAG_03623","SJAG_01162","SJAG_04953","SJAG_00668","SJAG_01216","SJAG_00614","SJAG_01199","SJAG_03653","SJAG_04632","SJAG_04399","SJAG_02515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60653,72008,75026,77635,80905,81238,81346,81439,91244,101903,102064,104785,110800],"is_not":false,"summary":null,"term":"GO:0045454"}]},"cv_name":"biological_process","definition":"Any process that maintains the redox environment of a cell or compartment within a cell.","definition_xrefs":["PMID:38689066","GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00614":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_03166":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04553":null,"SJAG_04632":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell redox homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-1222541","GO:0045867","GO:0045868","Reactome:R-HSA-1222556","Wikipedia:Redox","GO:0030503"],"synonyms":[{"name":"regulation of cell redox homeostasis","type":"related"},{"name":"regulation of redox homeostasis","type":"broad"}],"termid":"GO:0045454","terms_by_termid":{"GO:0045454":null}}


id: GO:0050681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear androgen receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"nuclear androgen receptor binding","synonyms":[{"name":"AR binding","type":"exact"},{"name":"androgen receptor binding","type":"broad"}],"termid":"GO:0050681"}


id: MONDO:0054867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastroschisis","termid":"MONDO:0009264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraomphalocele","secondary_identifiers":["GARD:4218","MEDGEN:419800","MESH:C537170","UMLS:C2931431"],"synonyms":[{"name":"Paraomphalocele, epigastric","type":"related"},{"name":"Paraomphalocele, hypogastric","type":"related"}],"termid":"MONDO:0054867","xrefs":{"Monarch":{"xref_id":"0054867"}}}


id: GO:1903348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tight junction assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25050009","GOC:jz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"is_a","term_name":"regulation of bicellular tight junction assembly","termid":"GO:2000810"},{"relation_name":"positively_regulates","term_name":"bicellular tight junction assembly","termid":"GO:0070830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of bicellular tight junction assembly","synonyms":[{"name":"activation of tight junction assembly","type":"narrow"},{"name":"activation of tight junction formation","type":"narrow"},{"name":"positive regulation of tight junction formation","type":"exact"},{"name":"up regulation of tight junction assembly","type":"exact"},{"name":"up regulation of tight junction formation","type":"exact"},{"name":"up-regulation of tight junction assembly","type":"exact"},{"name":"up-regulation of tight junction formation","type":"exact"},{"name":"upregulation of tight junction assembly","type":"exact"},{"name":"upregulation of tight junction formation","type":"exact"}],"termid":"GO:1903348"}


id: SO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mating type region motif, the rightmost segment of homology in the HML and MAT mating loci (not present in HMR).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Z2_region","synonyms":[{"name":"Z2-segment","type":"exact"}],"termid":"SO:0002003"}


id: MOD:01401
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to a (2S,3S)-3-hydroxyasparagine.","definition_xrefs":["ChEBI:138107","PubMed:11823643","PubMed:12215170","PubMed:17573339","RESID:AA0478","ChEBI:50789","PubMed:12042299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxy-L-asparagine","termid":"MOD:01688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3S)-3-hydroxyasparagine","synonyms":[{"name":"(2S,3S)-2,4-diamino-3-hydroxy-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3S)-2-amino-3-hydroxy-4-butanediamic acid","type":"exact"},{"name":"(2S,3S)-3-hydroxyasparagine","type":"exact"},{"name":"(3S)3HyAsn","type":"exact"},{"name":"L-threo-beta-hydroxyasparagine","type":"exact"},{"name":"MOD_RES (3S)-3-hydroxyasparagine","type":"exact"}],"termid":"MOD:01401"}


id: MONDO:0016679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of neuroepithelial neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of neuroepithelial tissue (obsolete MONDO:0016679)","secondary_identifiers":["Orphanet:251558"],"synonyms":[{"name":"rare neuroepithelial neoplasm","type":"exact"}],"termid":"MONDO:0016679","xrefs":{"Monarch":{"xref_id":"0016679"}}}


id: MONDO:0012807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS) characterized by generalized severe blistering with widespread congenital absence of skin and pyloric atresia.","definition_xrefs":["Orphanet:158684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 5C, with pyloric atresia","secondary_identifiers":["GARD:16991","MESH:C567408","SCTID:716701004","OMIM:612138","UMLS:C2677349","MEDGEN:436922"],"synonyms":[{"name":"EBS with pyloric atresia","type":"related"},{"name":"EBS-PA","type":"exact"},{"name":"EBSPA","type":"related"},{"name":"epidermolysis bullosa simplex 5C, with pyloric atresia","type":"exact"},{"name":"epidermolysis bullosa simplex with pyloric atresia","type":"exact"}],"termid":"MONDO:0012807","xrefs":{"Monarch":{"xref_id":"0012807"}}}


id: MONDO:0016335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial disease with dilated cardiomyopathy (obsolete MONDO:0016335)","secondary_identifiers":["Orphanet:217613"],"termid":"MONDO:0016335","xrefs":{"Monarch":{"xref_id":"0016335"}}}


id: MONDO:0006725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diabetic angiopathy (obsolete MONDO:0006725)","termid":"MONDO:0006725","xrefs":{"Monarch":{"xref_id":"0006725"}}}


id: PBO:0067397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 503, pseudogene","termid":"PBO:0067397"}


id: GO:0016443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the digestion of double-stranded RNAs into 20 to 30-nucleotide products. These products typically associate to the RNA-induced silencing complex and serve as guide RNAs for posttranslational RNA interference.","definition_xrefs":["PMID:15242644"],"gene_count":0,"genotype_count":0,"name":"obsolete bidentate ribonuclease III activity (obsolete GO:0016443)","synonyms":[{"name":"bidentate RNase III activity","type":"exact"}],"termid":"GO:0016443"}


id: MONDO:0003114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bone giant cell sarcoma (obsolete MONDO:0003114)","termid":"MONDO:0003114","xrefs":{"Monarch":{"xref_id":"0003114"}}}


id: PBO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup132","termid":"PBO:0001723"}


id: PBO:0014300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific protein","termid":"PBO:0014300"}


id: GO:0005337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nucleoside transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-9754929","Reactome:R-HSA-109527","Reactome:R-HSA-109536","Reactome:R-HSA-5628807","Reactome:R-HSA-727740","Reactome:R-HSA-109534","Reactome:R-HSA-727749","Reactome:R-HSA-727768","Reactome:R-HSA-109529","Reactome:R-HSA-9751024","Reactome:R-HSA-9755015","Reactome:R-HSA-727767","Reactome:R-HSA-9755035"],"synonyms":[{"name":"intracellular nucleoside transmembrane transporter activity","type":"narrow"}],"termid":"GO:0005337"}


id: MONDO:0010712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"panhypopituitarism","termid":"MONDO:0019591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"panhypopituitarism, X-linked","secondary_identifiers":["SCTID:237683004","MESH:C538613","MEDGEN:87439","UMLS:C0342376","OMIM:312000","GARD:6737","DOID:0111779"],"synonyms":[{"name":"PHPX","type":"related"},{"name":"panhypopituitarism X-linked","type":"related"},{"name":"panhypopituitarism, X-linked","type":"exact"},{"name":"pituitary dwarfism IV","type":"related"},{"name":"pituitary dwarfism IV (formerly)","type":"related"},{"name":"pituitary dwarfism IV, formerly","type":"related"}],"termid":"MONDO:0010712","xrefs":{"Monarch":{"xref_id":"0010712"}}}


id: GO:0044853
data:
  {"annotated_genes":["SJAG_04714","SJAG_03536","SJAG_04620","SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90278,91176,105174,120559],"is_not":false,"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"A membrane raft that is part of the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft","termid":"GO:0045121"},{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03536":null,"SJAG_04001":null,"SJAG_04620":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane raft","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044853","terms_by_termid":{"GO:0044853":null}}


id: FYPO:0000469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mating type switching does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating type switching","termid":"FYPO:0000468"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished mating type switching","synonyms":[{"name":"abolished mating type switching during mitotic cell cycle","type":"related"},{"name":"absent mating type switching","type":"exact"},{"name":"mating type switching abolished","type":"exact"},{"name":"mating type switching abolished during vegetative growth","type":"exact"},{"name":"mating type switching: absent","type":"related"}],"termid":"FYPO:0000469"}


id: SO:0001200
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A negative_sense_RNA_viral_sequence is a ss_RNA_viral_sequence that is the sequence of a single stranded RNA virus that is complementary to mRNA and must be converted to positive sense RNA by RNA polymerase before translation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_RNA_viral_sequence","termid":"SO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative_sense_ssRNA_viral_sequence","synonyms":[{"name":"negative sense single stranded RNA virus","type":"related"},{"name":"negative sense ssRNA viral sequence","type":"exact"}],"termid":"SO:0001200"}


id: GO:0016873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for isomerases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete other isomerase activity (obsolete GO:0016873)","synonyms":[{"name":"other isomerase activity","type":"exact"}],"termid":"GO:0016873"}


id: PBO:0071388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 11","termid":"PBO:0071388"}


id: MONDO:0975755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eccrine angiomatous hamartoma","secondary_identifiers":["UMLS:C0406801","Orphanet:673568","MEDGEN:98361"],"termid":"MONDO:0975755","xrefs":{"Monarch":{"xref_id":"0975755"}}}


id: MONDO:0005658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with astrovirus, causing gastroenteritis in human infants, calves, lambs, and piglets.","definition_xrefs":["MESH:D019350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Astroviridae infectious disease","secondary_identifiers":["UMLS:C0376550","MEDGEN:84000"],"termid":"MONDO:0005658","xrefs":{"Monarch":{"xref_id":"0005658"}}}


id: PBO:0083281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified essential gene ABF1","termid":"PBO:0083281"}


id: MONDO:0014350
data:
  {"annotated_genes":["SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88238],"is_not":false,"summary":null,"term":"MONDO:0014350"}]},"cv_name":"mondo","definition":"Any Seckel syndrome in which the cause of the disease is a mutation in the DNA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Seckel syndrome 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:856014","OMIM:615807","DOID:0070009","UMLS:C3891452","GARD:16013"],"synonyms":[{"name":"DNA2 Seckel syndrome","type":"exact"},{"name":"SCKL8","type":"exact"},{"name":"Seckel syndrome 8","type":"exact"},{"name":"Seckel syndrome caused by mutation in DNA2","type":"exact"},{"name":"Seckel syndrome type 8","type":"exact"}],"termid":"MONDO:0014350","terms_by_termid":{"MONDO:0014350":null},"xrefs":{"Monarch":{"xref_id":"0014350"}}}


id: MONDO:0021921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"muscular atrophy","termid":"MONDO:0004323"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005240","MONDO:0005328"],"is_obsolete":false,"name":"Arnold stickler bourne syndrome","secondary_identifiers":["GARD:366","MEDGEN:419426","UMLS:C2931492","MESH:C537431"],"synonyms":[{"name":"corneal crystals myopathy and nephropathy","type":"related"},{"name":"corneal crystals myopathy and neuropathy","type":"related"}],"termid":"MONDO:0021921","xrefs":{"Monarch":{"xref_id":"0021921"}}}


id: GO:1903058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of melanosome organization.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:24769727","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of melanosome organization","termid":"GO:1903056"},{"relation_name":"positively_regulates","term_name":"melanosome organization","termid":"GO:0032438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of melanosome organization","synonyms":[{"name":"activation of melanosome organisation","type":"narrow"},{"name":"activation of melanosome organization","type":"narrow"},{"name":"activation of melanosome organization and biogenesis","type":"related"},{"name":"positive regulation of melanosome organisation","type":"exact"},{"name":"positive regulation of melanosome organization and biogenesis","type":"related"},{"name":"up regulation of melanosome organisation","type":"exact"},{"name":"up regulation of melanosome organization","type":"exact"},{"name":"up regulation of melanosome organization and biogenesis","type":"related"},{"name":"up-regulation of melanosome organisation","type":"exact"},{"name":"up-regulation of melanosome organization","type":"exact"},{"name":"up-regulation of melanosome organization and biogenesis","type":"related"},{"name":"upregulation of melanosome organisation","type":"exact"},{"name":"upregulation of melanosome organization","type":"exact"},{"name":"upregulation of melanosome organization and biogenesis","type":"related"}],"termid":"GO:1903058"}


id: PBO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E1-like activator enzyme Rad31","termid":"PBO:0000832"}


id: PBO:0082119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetylornithine aminotransferase; catalyzes the fourth step in the biosynthesis of the arginine precursor ornithine","termid":"PBO:0082119"}


id: GO:0032103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of a response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to external stimulus","synonyms":[{"name":"activation of response to external stimulus","type":"narrow"},{"name":"stimulation of response to external stimulus","type":"narrow"},{"name":"up regulation of response to external stimulus","type":"exact"},{"name":"up-regulation of response to external stimulus","type":"exact"},{"name":"upregulation of response to external stimulus","type":"exact"}],"termid":"GO:0032103"}


id: PBO:0043765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly homolog COX15","termid":"PBO:0043765"}


id: GO:1900626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of arugosin biosynthetic process","synonyms":[{"name":"regulation of arugosin anabolism","type":"exact"},{"name":"regulation of arugosin biosynthesis","type":"exact"},{"name":"regulation of arugosin formation","type":"exact"},{"name":"regulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900626"}


id: PBO:0016555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body WD repeat protein, human WDR8 family","termid":"PBO:0016555"}


id: PBO:0066112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASGRP3 antisense RNA 1","termid":"PBO:0066112"}


id: PBO:0111422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo1","termid":"PBO:0111422"}


id: GO:0009263
data:
  {"annotated_genes":["SJAG_04627","SJAG_04487","SJAG_02948","SJAG_00885","SJAG_03771","SJAG_02874","SJAG_04657","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[94298,97370,109206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[72799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[81280,71666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[72800,70221,94299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[72798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[71665,81303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"deoxyribonucleotide metabolic process","termid":"GO:0009262"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleotide anabolism","type":"exact"},{"name":"deoxyribonucleotide biosynthesis","type":"exact"},{"name":"deoxyribonucleotide formation","type":"exact"},{"name":"deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009263","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null}}


id: GO:0006181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"dGMP metabolic process","termid":"GO:0046054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dGMP biosynthetic process","synonyms":[{"name":"dGMP anabolism","type":"exact"},{"name":"dGMP biosynthesis","type":"exact"},{"name":"dGMP formation","type":"exact"},{"name":"dGMP synthesis","type":"exact"}],"termid":"GO:0006181"}


id: GO:0044216
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cell of a secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete other organism cell (obsolete GO:0044216)","termid":"GO:0044216"}


id: PBO:0050013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, A","termid":"PBO:0050013"}


id: PATO:0001131
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001131 absolute ratio value (obsolete PATO:0001131)","termid":"PATO:0001131"}


id: GO:0102956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + sinapoyl aldehyde = H+ + sinapaldehyde glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:sinapaldehyde 4-beta-D-glucosyltransferase activity (obsolete GO:0102956)","termid":"GO:0102956"}


id: GO:0006888
data:
  {"annotated_genes":["SJAG_01508","SJAG_01166","SJAG_02349","SJAG_04740","SJAG_00785","SJAG_02839","SJAG_01991","SJAG_02234","SJAG_02264","SJAG_02525","SJAG_04402","SJAG_04434","SJAG_03558","SJAG_04618","SJAG_00192","SJAG_02655","SJAG_03907","SJAG_00484","SJAG_00330","SJAG_03810","SJAG_03270","SJAG_04938","SJAG_01899","SJAG_03153","SJAG_00557","SJAG_04615","SJAG_02539","SJAG_01600","SJAG_03467","SJAG_04569","SJAG_00858","SJAG_04002","SJAG_01025","SJAG_01279","SJAG_01409","SJAG_01633","SJAG_00899","SJAG_04909","SJAG_04528","SJAG_00578","SJAG_04391","SJAG_04419","SJAG_03552","SJAG_00072","SJAG_05345","SJAG_04837","SJAG_02012","SJAG_03244","SJAG_04021","SJAG_02160","SJAG_01415","SJAG_00357","SJAG_04598","SJAG_00906","SJAG_02640","SJAG_05326","SJAG_04739","SJAG_02120","SJAG_04112","SJAG_03499","SJAG_05013","SJAG_02824","SJAG_01642","SJAG_04196","SJAG_04070","SJAG_03933","SJAG_02103","SJAG_04513","SJAG_03670","SJAG_00092","SJAG_02482","SJAG_04592","SJAG_01003","SJAG_00767","SJAG_05344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58057,59570,65009,68003,71614,72209,72729,72785,73232,73893,74044,74660,75415,75608,75673,75956,76279,76441,76705,76879,77098,77444,78129,78735,78770,79524,79818,80133,80576,80619,80720,80766,81047,81415,81707,90066,93019,93386,93967,95006,95093,95758,96907,97496,97936,99658,99803,100347,102244,102660,102993,104096,106540,108362,108777,109075,111466,112723,112816,114415,114674,117000,118377,118521,120836,120967],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[74787],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090114"},{"annotations":[73108,78315,80263,77425,78891,76619,76977],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090110"},{"annotations":[78424],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060628"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.","definition_xrefs":["ISBN:0716731363","GOC:tb","GOC:ascb_2009","GOC:dph","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":75,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00092":null,"SJAG_00192":null,"SJAG_00330":null,"SJAG_00357":null,"SJAG_00484":null,"SJAG_00557":null,"SJAG_00578":null,"SJAG_00767":null,"SJAG_00785":null,"SJAG_00858":null,"SJAG_00899":null,"SJAG_00906":null,"SJAG_01003":null,"SJAG_01025":null,"SJAG_01166":null,"SJAG_01279":null,"SJAG_01409":null,"SJAG_01415":null,"SJAG_01508":null,"SJAG_01600":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01899":null,"SJAG_01991":null,"SJAG_02012":null,"SJAG_02103":null,"SJAG_02120":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02264":null,"SJAG_02349":null,"SJAG_02482":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02824":null,"SJAG_02839":null,"SJAG_03153":null,"SJAG_03244":null,"SJAG_03270":null,"SJAG_03467":null,"SJAG_03499":null,"SJAG_03552":null,"SJAG_03558":null,"SJAG_03670":null,"SJAG_03810":null,"SJAG_03907":null,"SJAG_03933":null,"SJAG_04002":null,"SJAG_04021":null,"SJAG_04070":null,"SJAG_04112":null,"SJAG_04196":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04419":null,"SJAG_04434":null,"SJAG_04513":null,"SJAG_04528":null,"SJAG_04569":null,"SJAG_04592":null,"SJAG_04598":null,"SJAG_04615":null,"SJAG_04618":null,"SJAG_04739":null,"SJAG_04740":null,"SJAG_04837":null,"SJAG_04909":null,"SJAG_04938":null,"SJAG_05013":null,"SJAG_05326":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endoplasmic reticulum to Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-199977","GO:0048221","Reactome:R-HSA-159763"],"synonyms":[{"name":"ER to Golgi transport","type":"exact"},{"name":"ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"anterograde (ER to Golgi) transport","type":"exact"},{"name":"anterograde transport, ER to Golgi","type":"exact"},{"name":"anterograde transport, endoplasmic reticulum to Golgi","type":"exact"},{"name":"anterograde vesicle-mediated transport, ER to Golgi","type":"exact"},{"name":"anterograde vesicle-mediated transport, endoplasmic reticulum to Golgi","type":"exact"},{"name":"endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"rough ER to cis-Golgi transport","type":"exact"},{"name":"rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"}],"termid":"GO:0006888","terms_by_termid":{"GO:0006888":null,"GO:0060628":null,"GO:0090110":null,"GO:0090114":null}}


id: GO:0047479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced glutathione + glutathionylspermidine + ATP = trypanothione + ADP + phosphate.","definition_xrefs":["EC:6.3.1.9","MetaCyc:6.3.1.9-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"trypanothione synthase activity","secondary_identifiers":["RHEA:21532"],"synonyms":[{"name":"TSR synthetase activity","type":"related"},{"name":"glutathionylspermidine:glutathione ligase (ADP-forming)","type":"related"}],"termid":"GO:0047479"}


id: PBO:0001943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent amino acid oxidase (predicted)","termid":"PBO:0001943"}


id: GO:1902289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of defense response to oomycetes.","definition_xrefs":["GOC:TermGenie","PMID:16040633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of defense response to oomycetes","termid":"GO:1902288"},{"relation_name":"negatively_regulates","term_name":"defense response to oomycetes","termid":"GO:0002229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response to oomycetes","synonyms":[{"name":"down regulation of defense response to oomycetes","type":"exact"},{"name":"down-regulation of defense response to oomycetes","type":"exact"},{"name":"downregulation of defense response to oomycetes","type":"exact"},{"name":"inhibition of defense response to oomycetes","type":"narrow"}],"termid":"GO:1902289"}


id: PBO:0070279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 20","termid":"PBO:0070279"}


id: GO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-alanine, 3-aminopropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"beta-alanine transport","termid":"GO:0001762"}


id: GO:0043393
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97174,107091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein binding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043393","terms_by_termid":{"GO:1904530":null}}


id: PBO:0082261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amino acid transporter for valine, leucine, isoleucine, and tyrosine; low-affinity tryptophan and histidine transporter; overexpression confers FK506 and FTY720 resistance; protein abundance increases in response to DNA replication stress","termid":"PBO:0082261"}


id: PBO:0029926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GMP_binding","termid":"PBO:0029926"}


id: PBO:0080973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8 opposite strand pseudogene 2","termid":"PBO:0080973"}


id: GO:0160257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the granzyme K pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes.","definition_xrefs":["PMID:39914456","PMID:39814882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation, GZMK pathway","synonyms":[{"name":"complement activation, granzyme K pathway","type":"exact"}],"termid":"GO:0160257"}


id: PBO:0089513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADP ribosylation factor GTPase activating protein family","termid":"PBO:0089513"}


id: GO:0019559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including imidazol-5-yl-lactate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-histidine catabolic process to imidazol-5-yl-lactate","secondary_identifiers":["MetaCyc:HISTDEG-PWY"],"synonyms":[{"name":"histidine breakdown to imidazol-5-yl-lactate","type":"exact"},{"name":"histidine degradation to imidazol-5-yl-lactate","type":"exact"}],"termid":"GO:0019559"}


id: PBO:0053163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDLRAD4 antisense RNA 1","termid":"PBO:0053163"}


id: MONDO:0001416
data:
  {"annotated_genes":["SJAG_02748","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86881,89095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the female reproductive system. Representative examples include endometrial carcinoma, cervical carcinoma, ovarian carcinoma, uterine corpus leiomyosarcoma, adenosarcoma, malignant mixed mesodermal (mullerian) tumor, and gestational choriocarcinoma.","definition_xrefs":["NCIT:C4913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female reproductive organ cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:C51-C58","ICD9:184","SCTID:126907002","DOID:120","EFO:1001331","MEDGEN:195944","UMLS:C0699889"],"synonyms":[{"name":"cancer of female reproductive organ","type":"exact"},{"name":"female reproductive cancer","type":"exact"},{"name":"female reproductive organ cancer","type":"exact"},{"name":"gynecologic cancer","type":"exact"},{"name":"malignant female reproductive organ neoplasm","type":"exact"},{"name":"malignant female reproductive system neoplasm","type":"exact"},{"name":"malignant female reproductive system tumor","type":"exact"},{"name":"malignant female reproductive system tumour","type":"exact"},{"name":"malignant gynecologic neoplasm","type":"exact"},{"name":"malignant gynecologic tumor","type":"exact"},{"name":"malignant gynecologic tumour","type":"exact"},{"name":"malignant neoplasm of female genital organ","type":"exact"},{"name":"malignant neoplasm of female reproductive organ","type":"exact"},{"name":"malignant neoplasm of female reproductive system","type":"exact"},{"name":"malignant neoplasm of the female reproductive system","type":"exact"},{"name":"malignant tumor of female reproductive system","type":"exact"},{"name":"malignant tumor of the female reproductive system","type":"exact"},{"name":"malignant tumour of female reproductive system","type":"exact"},{"name":"malignant tumour of the female reproductive system","type":"exact"}],"termid":"MONDO:0001416","terms_by_termid":{"MONDO:0011962":null},"xrefs":{"Monarch":{"xref_id":"0001416"}}}


id: PBO:0088132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; is conserved in mammals; predicted to contain eleven transmembrane helices; interacts with Pdr5p, a protein involved in multidrug resistance","termid":"PBO:0088132"}


id: PBO:0031213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_regulation_phenotype,_adaptive_response_to_loss_of_mtDNA_(obsolete_FYPO:0000221)","termid":"PBO:0031213"}


id: GO:0120294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutaminyl-[protein] + serotonin = 5-serotonyl-L-glutamyl-[protein] + NH4(+).","definition_xrefs":["GOC:sp","PMID:14697203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"peptide serotonyltransferase activity","secondary_identifiers":["RHEA:66552"],"termid":"GO:0120294"}


id: MONDO:1012613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intestinal cobalamin (vitamin B12) malabsorption that occurs in dogs due to a mutation in the AMN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"intestinal cobalamin (vitamin B12) malabsorption, dog","termid":"MONDO:1012451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intestinal cobalamin (vitamin B12) malabsorption, AMN-related, dog","secondary_identifiers":["OMIA:000565-9615"],"termid":"MONDO:1012613","xrefs":{"Monarch":{"xref_id":"1012613"}}}


id: PBO:0007356
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA trimethylguanosine capped","termid":"PBO:0007356"}


id: PBO:0044304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 domain containing 1","termid":"PBO:0044304"}


id: PATO:0015003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A decrease in the ability of a process to produce its output.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"process efficacy","termid":"PATO:0015002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased efficacy","termid":"PATO:0015003"}


id: GO:0021932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radially directed movement of a cell along radial glial cells in the hindbrain. Radial migration refers to a directed movement from the internal ventricular area to the outer surface of the hindbrain.","definition_xrefs":["GOC:dph","PMID:15157725","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain radial glia guided cell migration","termid":"GO:0021932"}


id: GO:1901785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-cresol.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:10623531","UniPathway:UPA00708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol catabolic process","termid":"GO:0046199"},{"relation_name":"is_a","term_name":"p-cresol metabolic process","termid":"GO:1901784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-cresol catabolic process","synonyms":[{"name":"p-cresol breakdown","type":"exact"},{"name":"p-cresol catabolism","type":"exact"},{"name":"p-cresol degradation","type":"exact"}],"termid":"GO:1901785"}


id: GO:0140078
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66662],"is_not":false,"summary":null,"term":"GO:0140078"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of an AP site 3' of the baseless site by a beta-lyase mechanism, leaving an unsaturated aldehyde, termed a 3'-(4-hydroxy-5-phospho-2-pentenal) residue, and a 5'-phosphate.","definition_xrefs":["PMID:1698278","RHEA:66592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-(apurinic or apyrimidinic site) endonuclease activity","termid":"GO:0003906"},{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"class I DNA-(apurinic or apyrimidinic site) endonuclease activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:4.2.99.18-RXN","EC:4.2.99.18","Wikipedia:AP_endonuclease"],"synonyms":[{"name":"AP endonuclease class I activity","type":"related"},{"name":"AP lyase activity","type":"related"},{"name":"AP site-DNA 5'-phosphomonoester-lyase activity","type":"exact"},{"name":"DNA-(apurinic or apyrimidinic site) 5'-phosphomonoester-lyase activity","type":"exact"},{"name":"DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"},{"name":"class I AP endonuclease activity","type":"related"},{"name":"class I DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"}],"termid":"GO:0140078","terms_by_termid":{"GO:0140078":null}}


id: GO:0034275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving kynurenic acid, 4-hydroxyquinoline-2-carboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"kynurenic acid metabolic process","synonyms":[{"name":"4-hydroxyquinoline-2-carboxylic acid metabolic process","type":"exact"},{"name":"kynurenic acid metabolism","type":"exact"}],"termid":"GO:0034275"}


id: GO:0120180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a cell-substrate junction into its constituent components.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction organization","termid":"GO:0150115"},{"relation_name":"is_a","term_name":"cell junction disassembly","termid":"GO:0150146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-substrate junction disassembly","termid":"GO:0120180"}


id: PBO:0075118
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id: GO:0034166
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id: PBO:0045729
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id: MONDO:0016722
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id: PBO:0059294
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id: PBO:0063705
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id: PATO:0000188
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