# terms

id: MONDO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A bulbospinal muscular atrophy that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete bulbospinal muscular atrophy of adulthood (obsolete MONDO:0016115)","secondary_identifiers":["Orphanet:206707"],"synonyms":[{"name":"adult bulbospinal muscular atrophy","type":"exact"},{"name":"bulbospinal muscular atrophy of adult","type":"related"},{"name":"bulbospinal muscular atrophy of adults","type":"exact"}],"termid":"MONDO:0016115","xrefs":{"Monarch":{"xref_id":"0016115"}}}


id: PBO:0031655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031655"}


id: MONDO:0015545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complication of rheumatic disease that is caused by excessive activation and uncontrolled proliferation of T lymphocytes and well-differentiated macrophages. It is characterized by fever, pancytopenia, liver insufficiency, coagulopathy and neurologic symptoms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"secondary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"macrophage activation syndrome","secondary_identifiers":["MedDRA:10053867","MEDGEN:242753","Orphanet:158061","SCTID:430478003","UMLS:C1096155","GARD:12124","MESH:D055501","EFO:1001806","NCIT:C114471"],"synonyms":[{"name":"MAS","type":"exact"},{"name":"reactive hemophagocytic lymphohistiocytosis","type":"exact"}],"termid":"MONDO:0015545","xrefs":{"Monarch":{"xref_id":"0015545"}}}


id: GO:0150088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A single axon terminal bouton making contact onto two or more dendritic spines protruding from multiple dendrites.","definition_xrefs":["PMID:11248111","GOC:aruk","GOC:bc","PMID:24487234","PMID:22028887","PMID:7482800","PMID:8366344","PMID:10586883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synapse bouton","termid":"GO:0150086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"multiple synapse bouton, contacting multiple dendrites","synonyms":[{"name":"MSB2","type":"exact"},{"name":"type 2 multi-synapse bouton","type":"exact"},{"name":"type 2 multi-synaptic bouton","type":"exact"},{"name":"type 2 multiple spine synapse bouton","type":"exact"},{"name":"type 2 multiple-synapse bouton","type":"exact"},{"name":"type 2 multisynapse bouton","type":"exact"},{"name":"type 2 multisynaptic bouton","type":"exact"}],"termid":"GO:0150088"}


id: PBO:0069168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 420, pseudogene","termid":"PBO:0069168"}


id: PBO:0054650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2055","termid":"PBO:0054650"}


id: PBO:0050629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 4","termid":"PBO:0050629"}


id: GO:0015719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of allantoate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"allantoate transport","synonyms":[{"name":"allantoin/allantoate transport","type":"broad"}],"termid":"GO:0015719"}


id: MONDO:0016647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare type of Stickler syndrome characterized by moderate to severe sensorineural hearing loss, high myopia, retinal degeneration, vitreous anomalies, and epiphyseal dysplasia. Midface hypoplasia, cleft palate, as well as additional skeletal manifestations (such as platyspondyly, scoliosis, and tibial and femoral bowing at birth) have also been observed.","definition_xrefs":["Orphanet:250984"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive Stickler syndrome (obsolete MONDO:0016647)","synonyms":[{"name":"Stickler syndrome, autosomal recessive","type":"exact"}],"termid":"MONDO:0016647","xrefs":{"Monarch":{"xref_id":"0016647"}}}


id: PBO:0043311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4","termid":"PBO:0043311"}


id: GO:0030868
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the smooth endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum","termid":"GO:0005790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005789","GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"smooth endoplasmic reticulum membrane","secondary_identifiers":["NIF_Subcellular:sao1596955044"],"synonyms":[{"name":"SER membrane","type":"exact"},{"name":"smooth ER membrane","type":"exact"}],"termid":"GO:0030868"}


id: PBO:0050667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 4 like","termid":"PBO:0050667"}


id: PBO:0079210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase 2","termid":"PBO:0079210"}


id: PR:O94530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sua5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonylcarbamoyl-AMP synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.03c","synonyms":[{"name":"L-threonylcarbamoyladenylate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sua5","type":"exact"},{"name":"TC-AMP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A37 threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94530"}


id: PBO:0030326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_wall_biogenesis","termid":"PBO:0030326"}


id: MONDO:1010483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetralogy of fallot, non-human animal","termid":"MONDO:1010021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, domestic cat","secondary_identifiers":["OMIA:000994-9685"],"termid":"MONDO:1010483","xrefs":{"Monarch":{"xref_id":"1010483"}}}


id: MONDO:0859690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant adenoma","termid":"MONDO:0850125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant cystadenoma","secondary_identifiers":["DOID:60004"],"termid":"MONDO:0859690","xrefs":{"Monarch":{"xref_id":"0859690"}}}


id: GO:0045972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone secretion","termid":"GO:0007558"},{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone secretion","termid":"GO:0045443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of juvenile hormone secretion","synonyms":[{"name":"down regulation of juvenile hormone secretion","type":"exact"},{"name":"down-regulation of juvenile hormone secretion","type":"exact"},{"name":"downregulation of juvenile hormone secretion","type":"exact"},{"name":"inhibition of juvenile hormone secretion","type":"narrow"}],"termid":"GO:0045972"}


id: FYPO:0003574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003574"}


id: PBO:0087172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B12.5; part of central core; similar to Rpc19p and bacterial alpha subunit","termid":"PBO:0087172"}


id: PR:O94717
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ers1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-silencing factor ers1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.05","synonyms":[{"name":"Spom972h-ers1","type":"exact"}],"termid":"PR:O94717"}


id: PBO:0091339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, TSS is downstream of MET, relates to 5'UTR of adjacent gene","termid":"PBO:0091339"}


id: MONDO:1010030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant high-grade glioma that occurs during childhood in the central nervous system.","definition_xrefs":["PMID:35456430","PMID:38496580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric high-grade glioma","secondary_identifiers":["NCIT:C202298"],"synonyms":[{"name":"childhood malignant glioma","type":"exact"},{"name":"pHGG","type":"exact"}],"termid":"MONDO:1010030","xrefs":{"Monarch":{"xref_id":"1010030"}}}


id: MOD:00587
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 6x(13)C, 4x(15)N labeled L-arginine.","definition_xrefs":["PubMed:12716131","Unimod:267","OMSSA:137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,4x(15)N labeled L-arginine","synonyms":[{"name":"13C(6) 15N(4) Silac label","type":"related"},{"name":"Label:13C(6)15N(4)","type":"related"},{"name":"arg-13c6-15n4","type":"exact"}],"termid":"MOD:00587"}


id: PBO:0080284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 47 pseudogene","termid":"PBO:0080284"}


id: PBO:0072895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol-C5-desaturase","termid":"PBO:0072895"}


id: FYPO:0001172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which hypermethylation of the 7-(mono)methylguanosine (m(7)G) cap structure at the 2' position of the guanosine residue to form a 2,2,7-trimethylguanosine cap structure is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal 7-methylguanosine cap hypermethylation","synonyms":[{"name":"abnormal 2,2,7-trimethylguanosine cap formation","type":"exact"},{"name":"abnormal 7-methylguanosine cap hypermethylation during mitotic cell cycle","type":"related"},{"name":"abnormal 7-methylguanosine cap hypermethylation during vegetative growth","type":"exact"},{"name":"abnormal TMG cap formation","type":"exact"},{"name":"abnormal conversion of m(7)G to m(3)G","type":"exact"},{"name":"abnormal snRNA capping","type":"narrow"},{"name":"abnormal snoRNA capping","type":"narrow"}],"termid":"FYPO:0001172"}


id: GO:1904960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytochrome-c oxidase activity.","definition_xrefs":["PMID:26734017","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of cytochrome-c oxidase activity","termid":"GO:1904959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of cytochrome-c oxidase activity","synonyms":[{"name":"activation of NADH cytochrome c oxidase","type":"narrow"},{"name":"activation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"activation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"activation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"activation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"activation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"activation of cytochrome a3 activity","type":"narrow"},{"name":"activation of cytochrome aa3 activity","type":"narrow"},{"name":"activation of cytochrome c oxidase activity","type":"narrow"},{"name":"activation of cytochrome oxidase activity","type":"related"},{"name":"activation of cytochrome-c oxidase activity","type":"narrow"},{"name":"activation of ferrocytochrome c oxidase","type":"narrow"},{"name":"activation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"activation of indophenol oxidase","type":"narrow"},{"name":"activation of indophenolase","type":"narrow"},{"name":"activation of warburg's respiratory enzyme activity","type":"related"},{"name":"positive regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"positive regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"positive regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"positive regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"positive regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"positive regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"positive regulation of cytochrome a3 activity","type":"narrow"},{"name":"positive regulation of cytochrome aa3 activity","type":"narrow"},{"name":"positive regulation of cytochrome c oxidase activity","type":"exact"},{"name":"positive regulation of cytochrome oxidase activity","type":"related"},{"name":"positive regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"positive regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"positive regulation of indophenol oxidase","type":"narrow"},{"name":"positive regulation of indophenolase","type":"narrow"},{"name":"positive regulation of warburg's respiratory enzyme activity","type":"related"},{"name":"up regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"up regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"up regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"up regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"up regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"up regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"up regulation of cytochrome a3 activity","type":"narrow"},{"name":"up regulation of cytochrome aa3 activity","type":"narrow"},{"name":"up regulation of cytochrome c oxidase activity","type":"exact"},{"name":"up regulation of cytochrome oxidase activity","type":"related"},{"name":"up regulation of cytochrome-c oxidase activity","type":"exact"},{"name":"up regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"up regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"up regulation of indophenol oxidase","type":"narrow"},{"name":"up regulation of indophenolase","type":"narrow"},{"name":"up regulation of warburg's respiratory enzyme activity","type":"related"},{"name":"up-regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"up-regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"up-regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"up-regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"up-regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"up-regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"up-regulation of cytochrome a3 activity","type":"narrow"},{"name":"up-regulation of cytochrome aa3 activity","type":"narrow"},{"name":"up-regulation of cytochrome c oxidase activity","type":"exact"},{"name":"up-regulation of cytochrome oxidase activity","type":"related"},{"name":"up-regulation of cytochrome-c oxidase activity","type":"exact"},{"name":"up-regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"up-regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"up-regulation of indophenol oxidase","type":"narrow"},{"name":"up-regulation of indophenolase","type":"narrow"},{"name":"up-regulation of warburg's respiratory enzyme activity","type":"related"},{"name":"upregulation of NADH cytochrome c oxidase","type":"exact"},{"name":"upregulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"upregulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"upregulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"upregulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"upregulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"upregulation of cytochrome a3 activity","type":"narrow"},{"name":"upregulation of cytochrome aa3 activity","type":"narrow"},{"name":"upregulation of cytochrome c oxidase activity","type":"exact"},{"name":"upregulation of cytochrome oxidase activity","type":"related"},{"name":"upregulation of cytochrome-c oxidase activity","type":"exact"},{"name":"upregulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"upregulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"upregulation of indophenol oxidase","type":"narrow"},{"name":"upregulation of indophenolase","type":"narrow"},{"name":"upregulation of warburg's respiratory enzyme activity","type":"related"}],"termid":"GO:1904960"}


id: PBO:0089601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR2-SEACAT complex WD repeat subunit Seh1","termid":"PBO:0089601"}


id: PBO:0031158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tyrosine_import","termid":"PBO:0031158"}


id: MONDO:0001487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the intrahepatic bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"gallbladder cancer","termid":"MONDO:0005411"},{"relation_name":"is_a","term_name":"bile duct cancer","termid":"MONDO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"intrahepatic bile duct cancer","secondary_identifiers":["UMLS:C0546835","SCTID:187777008","ICD9:155.1","MEDGEN:639748","DOID:12298"],"synonyms":[{"name":"Ca intrahepatic bile ducts","type":"exact"},{"name":"cancer of intrahepatic bile duct","type":"exact"},{"name":"malignant intrahepatic bile duct neoplasm","type":"exact"},{"name":"malignant neoplasm of intrahepatic bile duct","type":"exact"},{"name":"malignant neoplasm of intrahepatic bile ducts","type":"exact"},{"name":"malignant neoplasm of intrahepatic biliary passages","type":"exact"}],"termid":"MONDO:0001487","xrefs":{"Monarch":{"xref_id":"0001487"}}}


id: PBO:0040886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 8b","termid":"PBO:0040886"}


id: GO:0102641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-propane-1,2-diol + NADP = (R)-lactaldehyde + NADPH + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(R)-lactaldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-15743"],"termid":"GO:0102641"}


id: MONDO:0019785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 15q24 microdeletion syndrome (obsolete MONDO:0019785)","termid":"MONDO:0019785","xrefs":{"Monarch":{"xref_id":"0019785"}}}


id: GO:0034918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxy-2-methylhexanoyl-CoA = 2-methyl-3-oxohexanoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-2-methylhexanoyl-CoA dehydrogenase activity (obsolete GO:0034918)","termid":"GO:0034918"}


id: GO:0005948
data:
  {"annotated_genes":["SJAG_03985","SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77527,77849],"is_not":false,"summary":null,"term":"GO:0005948"}]},"cv_name":"cellular_component","definition":"A dimeric (a large and a small chain) or tetrameric (two large and two small chains) enzyme complex. Catalyzes the formation of acetolactate from pyruvate.","definition_xrefs":["PMID:16458324","PMID:8756689","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03985":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"acetolactate synthase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"acetohydroxyacid synthase complex","type":"exact"}],"termid":"GO:0005948","terms_by_termid":{"GO:0005948":null}}


id: GO:0052486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the innate immune response of the symbiont organism, the symbiont's first line of defense against infection. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont innate immunity (obsolete GO:0052486)","synonyms":[{"name":"negative regulation by organism of symbiont innate immunity","type":"exact"},{"name":"negative regulation of symbiont innate immune response","type":"exact"}],"termid":"GO:0052486"}


id: GO:0033047
data:
  {"annotated_genes":["SJAG_01297","SJAG_00082","SJAG_04999","SJAG_03681","SJAG_04464","SJAG_01679","SJAG_04884","SJAG_00460","SJAG_04126","SJAG_01330","SJAG_00883","SJAG_05290","SJAG_04140","SJAG_03353","SJAG_01805","SJAG_02336","SJAG_02169","SJAG_03048","SJAG_02451","SJAG_04280","SJAG_04597","SJAG_02332","SJAG_00244","SJAG_01837","SJAG_03126","SJAG_01082","SJAG_04699","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109181,115775,110213,116268,101488,105816,92569,113944,117903],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[103714,116499,101330,111878,117560,108265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[104279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[105200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[96064],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[104287],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902845"},{"annotations":[118011,113945,107120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[118681],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[113183,118684,91844,104299,95670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[96280,91845],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1902846"},{"annotations":[113418],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[112998],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032888"},{"annotations":[117052],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sister chromatid segregation during mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid segregation","termid":"GO:0033045"},{"relation_name":"regulates","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04464":null,"SJAG_04597":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic sister chromatid segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033047","terms_by_termid":{"GO:0007094":null,"GO:0032888":null,"GO:0090267":null,"GO:0110161":null,"GO:0110162":null,"GO:0140429":null,"GO:0140499":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902845":null,"GO:1902846":null,"GO:2000816":null}}


id: PBO:0085914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; YOR019W has a paralog, JIP4, that arose from the whole genome duplication","termid":"PBO:0085914"}


id: GO:1905123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucosylceramidase activity.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","PMID:24334770","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucosylceramidase activity (obsolete GO:1905123)","synonyms":[{"name":"regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"regulation of GCase activity","type":"exact"},{"name":"regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"regulation of acid beta-glucosidase activity","type":"exact"},{"name":"regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"regulation of ceramide glucosidase activity","type":"exact"},{"name":"regulation of glucocerebrosidase activity","type":"exact"},{"name":"regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"regulation of psychosine hydrolase activity","type":"exact"}],"termid":"GO:1905123"}


id: PR:P26674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ste6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P26674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ste6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.01","synonyms":[{"name":"Spom972h-ste6","type":"exact"}],"termid":"PR:P26674"}


id: GO:0045917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement activation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of humoral immune response","termid":"GO:0002922"},{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"positively_regulates","term_name":"complement activation","termid":"GO:0006956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement activation","synonyms":[{"name":"activation of complement activation","type":"narrow"},{"name":"positive regulation of complement cascade","type":"exact"},{"name":"stimulation of complement activation","type":"narrow"},{"name":"up regulation of complement activation","type":"exact"},{"name":"up-regulation of complement activation","type":"exact"},{"name":"upregulation of complement activation","type":"exact"}],"termid":"GO:0045917"}


id: SO:0100010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An experimental region wherean analysis has been run and not produced any annotation.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_result_region","termid":"SO:0000703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no_output","synonyms":[{"name":"no output","type":"exact"}],"termid":"SO:0100010"}


id: PBO:0053176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain containing 1","termid":"PBO:0053176"}


id: MONDO:0003955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, usually solitary, well circumscribed multicystic neoplasm that arises from the breast and typically affects young females. The cysts are lined by papillary proliferations that contain epithelial and myoepithelial layers. In a minority of cases, atypia may be present.","definition_xrefs":["NCIT:C9503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal breast papillomatosis","termid":"MONDO:0004253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile breast papillomatosis","secondary_identifiers":["DOID:6641","MEDGEN:233588","UMLS:C1334303","SCTID:708518001"],"synonyms":[{"name":"Swiss cheese disease","type":"exact"},{"name":"breast juvenile papillomatosis","type":"related"},{"name":"juvenile breast papillomatosis","type":"exact"},{"name":"juvenile papillomatosis of breast","type":"exact"},{"name":"juvenile papillomatosis of the breast","type":"exact"}],"termid":"MONDO:0003955","xrefs":{"Monarch":{"xref_id":"0003955"}}}


id: PBO:0055769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA PDCD5 and p53 scaffold","termid":"PBO:0055769"}


id: PBO:0071028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 30","termid":"PBO:0071028"}


id: GO:0031282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of guanylate cyclase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of guanylate cyclase activity","termid":"GO:0031282"}


id: GO:1905159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of Factor XII activation.","definition_xrefs":["GO_REF:0000058","PMID:617517","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Factor XII activation (obsolete GO:1905159)","synonyms":[{"name":"down regulation of Factor XII activation","type":"exact"},{"name":"down regulation of Hageman factor activation","type":"exact"},{"name":"down-regulation of Factor XII activation","type":"exact"},{"name":"down-regulation of Hageman factor activation","type":"exact"},{"name":"downregulation of Factor XII activation","type":"exact"},{"name":"downregulation of Hageman factor activation","type":"exact"},{"name":"inhibition of Factor XII activation","type":"narrow"},{"name":"inhibition of Hageman factor activation","type":"narrow"},{"name":"negative regulation of Hageman factor activation","type":"exact"}],"termid":"GO:1905159"}


id: PBO:0048484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCOM1, MYZAP-POLR2M combined locus","termid":"PBO:0048484"}


id: PBO:0008880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3-containing 90S preribosome complex subunit Cms1 (predicted)","termid":"PBO:0008880"}


id: PBO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog2 (predicted)","termid":"PBO:0003362"}


id: PBO:0071253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 94","termid":"PBO:0071253"}


id: GO:0031833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 7 serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 7 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 7 receptor binding","type":"exact"},{"name":"type 7 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031833"}


id: PBO:0081905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 862","termid":"PBO:0081905"}


id: GO:0004045
data:
  {"annotated_genes":["SJAG_05008","SJAG_00936","SJAG_05221","SJAG_00308"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77731,79701,100545,103987],"is_not":false,"summary":null,"term":"GO:0004045"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-L-alpha-aminoacyl-tRNA + H2O = an N-acyl-L-amino acid + a tRNA + H+.","definition_xrefs":["RHEA:54448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00936":null,"SJAG_05008":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003824","GO:0140101","GO:0140098","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"peptidyl-tRNA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0019850","EC:3.1.1.29","GO:0019851","MetaCyc:AMINOCYL-TRNA-HYDROLASE-RXN"],"synonyms":[{"name":"D-tyrosyl-tRNA hydrolase activity","type":"narrow"},{"name":"N-substituted aminoacyl transfer RNA hydrolase activity","type":"related"},{"name":"aminoacyl-tRNA aminoacylhydrolase activity","type":"related"},{"name":"aminoacyl-tRNA hydrolase reaction","type":"exact"},{"name":"aminoacyl-transfer ribonucleate hydrolase activity","type":"related"}],"termid":"GO:0004045","terms_by_termid":{"GO:0004045":null}}


id: PR:Q9P7M5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00663","PANTHER:PTHR13305:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.13c","secondary_identifiers":["UniProtKB:Q9P7M5"],"synonyms":[{"name":"Spom972h-NOP10","type":"exact"},{"name":"nucleolar protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nucleolar protein family A member 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"snoRNP protein nop10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7M5"}


id: PBO:0003790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp90 co-chaperone Cdc37","termid":"PBO:0003790"}


id: GO:1900452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of long term synaptic depression.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"regulates","term_name":"long-term synaptic depression","termid":"GO:0060292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of long-term synaptic depression","synonyms":[{"name":"regulation of LTD","type":"related"},{"name":"regulation of long term depression","type":"broad"},{"name":"regulation of long term synaptic depression","type":"exact"}],"termid":"GO:1900452"}


id: MONDO:0016939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 2p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 2. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 2p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 2","termid":"MONDO:0016922"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 2","secondary_identifiers":["Orphanet:262698","MEDGEN:208635","icd11.foundation:232544112","MESH:C538318","UMLS:C0795803","GARD:5337"],"synonyms":[{"name":"2p duplication","type":"related"},{"name":"2p trisomy","type":"related"},{"name":"Duplication 2p","type":"related"},{"name":"chromosome 2p duplication","type":"related"},{"name":"partial duplication of chromosome 2p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 2","type":"exact"},{"name":"partial trisomy 2p","type":"related"},{"name":"partial trisomy of chromosome 2p","type":"exact"},{"name":"trisomy 2p","type":"related"}],"termid":"MONDO:0016939","xrefs":{"Monarch":{"xref_id":"0016939"}}}


id: MONDO:1012704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinal and skeletal dysplasia that occurs in dogs due to a mutation in the COL9A3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal and skeletal dysplasia, dog","termid":"MONDO:1012317"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculoskeletal dysplasia, COL9A3-related, dog","secondary_identifiers":["OMIA:001522-9615"],"synonyms":[{"name":"oculoskeletal dysplasia 1, dog","type":"related"}],"termid":"MONDO:1012704","xrefs":{"Monarch":{"xref_id":"1012704"}}}


id: GO:1990461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of iron ion. These include transport of iron away from sensitive areas and to compartments or complexes whose purpose is sequestration of iron ion.","definition_xrefs":["GOC:sart","PMID:23064556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"response to iron ion","termid":"GO:0010039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of iron ion","termid":"GO:1990461"}


id: PBO:0048461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase 1","termid":"PBO:0048461"}


id: GO:0090407
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id: GO:1900552
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving asperfuranone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"asperfuranone metabolic process","synonyms":[{"name":"asperfuranone metabolism","type":"exact"}],"termid":"GO:1900552"}


id: PBO:0111328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Nop58","termid":"PBO:0111328"}


id: MONDO:0007922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphedema - distichiasis is a rare syndromic lymphedema disorder characterized by lower-limb lymphedema and varying degrees of abnormal growth of eyelashes from the orifices of the Meibomian glands (distichiasis), with occasional associated manifestations.","definition_xrefs":["Orphanet:33001"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes distichiasis (obsolete MONDO:0020190)","termid":"MONDO:0020190"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphedema-distichiasis syndrome","secondary_identifiers":["NCIT:C128191","OMIM:153400","DOID:0111509","UMLS:C0265345","NORD:1383","MESH:C537710","SCTID:8634009","GARD:333","ICD10CM:Q82.0","ICD9:743.63","MEDGEN:75566"],"synonyms":[{"name":"hereditary lymphedema-distichiasis syndrome (subtype)","type":"related"},{"name":"lymphedema with distichiasis","type":"related"},{"name":"lymphedema-distichiasis syndrome","type":"exact"},{"name":"lymphedema-distichiasis syndrome with renal disease and diabetes mellitus","type":"related"}],"termid":"MONDO:0007922","xrefs":{"Monarch":{"xref_id":"0007922"}}}


id: GO:0006501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a lipid group to the carboxy-terminus of a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"C-terminal protein amino acid modification","termid":"GO:0018410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"C-terminal protein lipidation","secondary_identifiers":["Reactome:R-HSA-163125"],"termid":"GO:0006501"}


id: GO:0031533
data:
  {"annotated_genes":["SJAG_01724","SJAG_04488"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64697,70226],"is_not":false,"summary":null,"term":"GO:0031533"}]},"cv_name":"cellular_component","definition":"A protein complex that consists of an RNA 5' triphosphatase and a guanyl transferase (Cet1p and Ceg1p in S. cerevisiae; Pct1 and Ceg1 in S. pombe) and is involved in mRNA capping.","definition_xrefs":["PMID:12455993","GOC:vw","PMID:9345280","PMID:10347220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01724":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"mRNA capping enzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null},"termid":"GO:0031533","terms_by_termid":{"GO:0031533":null}}


id: PBO:0027905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_mitosis","termid":"PBO:0027905"}


id: GO:0005072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Activity of any of the molecules that transmit the signal from a TGF-beta receptor through the cytoplasm to the nucleus.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, cytoplasmic mediator activity (obsolete GO:0005072)","synonyms":[{"name":"TGF-beta receptor, cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, cytoplasmic mediator activity","type":"exact"}],"termid":"GO:0005072"}


id: FYPO:0003500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, forms one or more branches near a septum, is elongated, and has more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated, multiseptate cell","termid":"FYPO:0000134"},{"relation_name":"is_a","term_name":"viable elongated multiseptate vegetative cell","termid":"FYPO:0001496"},{"relation_name":"is_a","term_name":"viable branched, elongated vegetative cell","termid":"FYPO:0002459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000004","FYPO:0000032"],"is_obsolete":false,"name":"viable branched, elongated, multiseptate vegetative cell","synonyms":[{"name":"viable branched, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"viable branched, elongated, multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, long, multiseptate cell","type":"exact"}],"termid":"FYPO:0003500"}


id: GO:0014052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"regulation of GABA secretion","type":"exact"}],"termid":"GO:0014052"}


id: PBO:0006195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-modified_by","termid":"PBO:0006195"}


id: MONDO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive loss of tooth tissue by chemical processes that do not involve bacterial action. (Jablonski, Dictionary of Dentistry, 1992, p296)","definition_xrefs":["MESH:D014077-modified"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth erosion, non-bacterial","secondary_identifiers":["ICD9:521.3","MESH:D014077","ICD9:521.30","SCTID:82212003","UMLS:C0040436","ICD9:521.34","ICD9:521.35","DOID:2498","MEDGEN:21584"],"synonyms":[{"name":"generalised erosion","type":"related"},{"name":"generalized erosion","type":"related"},{"name":"localised erosion","type":"related"},{"name":"localized erosion","type":"related"},{"name":"tooth erosion","type":"exact"}],"termid":"MONDO:0002325","xrefs":{"Monarch":{"xref_id":"0002325"}}}


id: PBO:0091348
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DBR1","termid":"PBO:0091348"}


id: GO:0018406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of a peptidyl-tryptophan residue by the transfer of alpha-mannopyranose from dolichyl-activated mannose to the indole ring.","definition_xrefs":["RESID:AA0217","PMID:9450955","PMID:7947762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein C-linked glycosylation via tryptophan","termid":"GO:0018317"},{"relation_name":"is_a","term_name":"protein mannosylation","termid":"GO:0035268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan","secondary_identifiers":["GO:0032004"],"synonyms":[{"name":"protein amino acid C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan","type":"exact"},{"name":"protein amino acid C-linked mannosylation","type":"exact"}],"termid":"GO:0018406"}


id: PBO:0089085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase,  human DHRS7 family","termid":"PBO:0089085"}


id: PBO:0046430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B6","termid":"PBO:0046430"}


id: PATO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cylindrical shape that is hollow.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cylindrical","termid":"PATO:0001873"},{"relation_name":"is_a","term_name":"hollow","termid":"PATO:0002078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubular","synonyms":[{"name":"tube like","type":"exact"},{"name":"tube-shaped","type":"exact"},{"name":"tubulate","type":"exact"}],"termid":"PATO:0002299"}


id: PBO:0091733
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously thought to be a ribosomal protein","termid":"PBO:0091733"}


id: MONDO:0030860
data:
  {"annotated_genes":["SJAG_01537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87533],"is_not":false,"summary":null,"term":"MONDO:0030860"}]},"cv_name":"mondo","definition":"Any neuronopathy, distal hereditary motor in which the cause of the disease is a mutation in the BSCL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, type 5","termid":"MONDO:0100350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 5C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436838","DOID:0081401","GARD:18268","MEDGEN:1760720","OMIM:619112"],"synonyms":[{"name":"DHMN5C","type":"exact"},{"name":"HMN5C","type":"exact"},{"name":"neuropathy, distal hereditary motor, type VC","type":"exact"},{"name":"spinal muscular atrophy, distal, type 5C","type":"exact"}],"termid":"MONDO:0030860","terms_by_termid":{"MONDO:0030860":null},"xrefs":{"Monarch":{"xref_id":"0030860"}}}


id: PBO:0005890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine, mitochondrial","termid":"PBO:0005890"}


id: GO:1901412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole biosynthetic process from glutamate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glutamate","termid":"GO:1901410"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"is_a","term_name":"positive regulation of glutamate metabolic process","termid":"GO:2000213"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole biosynthetic process from glutamate","termid":"GO:0033526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0033013","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"activation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"activation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"activation of tetrapyrrole biosynthetic process from glutamate","type":"narrow"},{"name":"activation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"activation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:1901412"}


id: GO:1900876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nonadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonadec-1-ene metabolic process","synonyms":[{"name":"nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900876"}


id: PBO:0073049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 7","termid":"PBO:0073049"}


id: MONDO:0007245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cutaneous disorder characterized by the presence of several cafe-au-lait (CAL) macules without any other manifestations of neurofibromatosis or any other systemic disorder.","definition_xrefs":["Orphanet:2678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cafe au lait spots, multiple","secondary_identifiers":["MEDGEN:396266","MESH:C537421","UMLS:C1861975","OMIM:114030","GARD:3967"],"synonyms":[{"name":"NF6","type":"exact"},{"name":"autosomal dominant café au lait spots","type":"exact"},{"name":"cafe-au-lait spots, multiple","type":"exact"},{"name":"familial cafe-au-lait spots","type":"exact"},{"name":"familial café-au-lait spots","type":"exact"},{"name":"multiple cafe-au-lait spots","type":"exact"},{"name":"multiple cafe-au-lait syndrome","type":"exact"},{"name":"multiple café-au-lait spots","type":"exact"},{"name":"multiple café-au-lait syndrome","type":"exact"},{"name":"neurofibromatosis type 6","type":"exact"}],"termid":"MONDO:0007245","xrefs":{"Monarch":{"xref_id":"0007245"}}}


id: GO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"},{"relation_name":"regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002598"}


id: MOD:01295
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to monosodium L-aspartate.","definition_xrefs":["PubMed:12216740","Unimod:30#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosodium salt","termid":"MOD:00423"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium L-aspartate","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"Na1Asp","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:01295"}


id: MONDO:0020113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired aplastic anemia","termid":"MONDO:0015610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"primary acquired red cell aplasia","secondary_identifiers":["GARD:19465","MedDRA:10038184","Orphanet:98421"],"synonyms":[{"name":"primary autoimmune red cell aplasia","type":"exact"},{"name":"red cell aplasia","type":"broad"}],"termid":"MONDO:0020113","xrefs":{"Monarch":{"xref_id":"0020113"}}}


id: PBO:0078841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 3-5","termid":"PBO:0078841"}


id: PBO:0068503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 91, pseudogene","termid":"PBO:0068503"}


id: PBO:0043797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylated homeobox like 2","termid":"PBO:0043797"}


id: GO:0090119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, or cholesterol-containing compounds, by membrane-bounded vesicles.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"},{"relation_name":"is_a","term_name":"intracellular cholesterol transport","termid":"GO:0032367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"vesicle-mediated cholesterol transport","termid":"GO:0090119"}


id: GO:0070415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving trehalose that occur as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:jp","GOC:mah","PMID:9797333"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose metabolism in response to cold stress (obsolete GO:0070415)","synonyms":[{"name":"trehalose metabolic process involved in response to cold stress","type":"exact"}],"termid":"GO:0070415"}


id: PBO:0059474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3 pseudogene 1","termid":"PBO:0059474"}


id: PBO:0087762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC1 (Tor1p or Tor2p-Kog1p-Lst8p-Tco89p); regulates global H3K56ac; TORC1 complex regulates growth in response to nutrient availability; cooperates with Ssd1p in the maintenance of cellular integrity; deletion strains are hypersensitive to rapamycin","termid":"PBO:0087762"}


id: PBO:0038414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_transports_or_maintains_localization_of","termid":"PBO:0038414"}


id: PBO:0057947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-3","termid":"PBO:0057947"}


id: PBO:0074237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 49 member 4","termid":"PBO:0074237"}


id: PR:O13868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.02c gene.","definition_xrefs":["UniProtKB:O13868","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.02c","synonyms":[{"name":"Spom972h-SPAC1B3.02c","type":"exact"}],"termid":"PR:O13868"}


id: GO:0009169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine ribonucleoside monophosphate, a compound consisting of a purine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate catabolic process","termid":"GO:0009128"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate catabolic process","termid":"GO:0009158"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleoside monophosphate catabolic process","synonyms":[{"name":"purine ribonucleoside monophosphate breakdown","type":"exact"},{"name":"purine ribonucleoside monophosphate catabolism","type":"exact"},{"name":"purine ribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009169"}


id: GO:0045149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetoin, 3-hydroxy-2-butanone, often as part of a fermentation pathway or for use as a carbon source.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"acetoin metabolic process","synonyms":[{"name":"acetoin metabolism","type":"exact"}],"termid":"GO:0045149"}


id: GO:0034976
data:
  {"annotated_genes":["SJAG_01626","SJAG_04262","SJAG_04471","SJAG_02539","SJAG_00288","SJAG_00931","SJAG_03657","SJAG_01656","SJAG_01709","SJAG_04046","SJAG_01768","SJAG_04583","SJAG_00766","SJAG_02244","SJAG_04345","SJAG_03345","SJAG_00403","SJAG_01134","SJAG_00226","SJAG_03611","SJAG_03032","SJAG_04612","SJAG_03237","SJAG_01585","SJAG_02685","SJAG_03841","SJAG_04103","SJAG_00941","SJAG_01051","SJAG_04118","SJAG_00530","SJAG_03153","SJAG_01527","SJAG_04904","SJAG_04435","SJAG_00948","SJAG_01528","SJAG_00681","SJAG_04384","SJAG_02694","SJAG_03227","SJAG_05274","SJAG_00790","SJAG_02601","SJAG_01854","SJAG_04429","SJAG_02774","SJAG_00126","SJAG_01516","SJAG_00627","SJAG_01038","SJAG_04283","SJAG_07000","SJAG_00131","SJAG_05022","SJAG_03482","SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74563,82027,98444,106618,120433],"is_not":false,"summary":null,"term":"GO:0034976"},{"annotations":[118031,115800,116072,79055,119238,100611,73070,103149,118785,116208,69711,72518,109125,78157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030968"},{"annotations":[110068,72516,80313,76572,72773,99734,73068,96866,119167,93256,96594,118600,106755,78155,110133,74259,80467,80431,72578,72603,80625,95430,106669,89623,75257,91391,109625,113964,117860,76132,102679,81376,104848,100116,80508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036503"},{"annotations":[94959,68067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036498"},{"annotations":[79854,79331],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904293"},{"annotations":[77399,80915],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[97589,95407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stress acting at the endoplasmic reticulum. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen.","definition_xrefs":["GOC:cjm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00131":null,"SJAG_00226":null,"SJAG_00288":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00627":null,"SJAG_00681":null,"SJAG_00766":null,"SJAG_00790":null,"SJAG_00931":null,"SJAG_00941":null,"SJAG_00948":null,"SJAG_01038":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01516":null,"SJAG_01527":null,"SJAG_01528":null,"SJAG_01585":null,"SJAG_01626":null,"SJAG_01656":null,"SJAG_01709":null,"SJAG_01768":null,"SJAG_01854":null,"SJAG_01858":null,"SJAG_02244":null,"SJAG_02539":null,"SJAG_02601":null,"SJAG_02685":null,"SJAG_02694":null,"SJAG_02774":null,"SJAG_03032":null,"SJAG_03153":null,"SJAG_03227":null,"SJAG_03237":null,"SJAG_03345":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03657":null,"SJAG_03841":null,"SJAG_04046":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04345":null,"SJAG_04384":null,"SJAG_04429":null,"SJAG_04435":null,"SJAG_04471":null,"SJAG_04583":null,"SJAG_04612":null,"SJAG_04904":null,"SJAG_05022":null,"SJAG_05274":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to endoplasmic reticulum stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"ER stress response","type":"exact"},{"name":"cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"response to ER stress","type":"exact"}],"termid":"GO:0034976","terms_by_termid":{"GO:0030968":null,"GO:0030970":null,"GO:0034976":null,"GO:0036498":null,"GO:0036503":null,"GO:0097466":null,"GO:1904293":null}}


id: GO:0005639
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear inner membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of nuclear inner membrane (obsolete GO:0005639)","synonyms":[{"name":"integral to nuclear inner membrane","type":"narrow"}],"termid":"GO:0005639"}


id: PBO:0067508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 648, pseudogene","termid":"PBO:0067508"}


id: PBO:0000730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase (predicted)","termid":"PBO:0000730"}


id: MONDO:1030001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, juvenile absence, susceptibility to","secondary_identifiers":["OMIMPS:607631"],"termid":"MONDO:1030001","xrefs":{"Monarch":{"xref_id":"1030001"}}}


id: PBO:0004109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 (predicted)","termid":"PBO:0004109"}


id: MONDO:0019596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to testicular steroidogenesis defect (obsolete MONDO:0019596)","secondary_identifiers":["Orphanet:90787"],"synonyms":[{"name":"46,XY DSD due to testicular steroidogenesis defect","type":"exact"}],"termid":"MONDO:0019596","xrefs":{"Monarch":{"xref_id":"0019596"}}}


id: PBO:0066006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ral GEF with PH domain and SH3 binding motif 1","termid":"PBO:0066006"}


id: GO:0031628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an opioid receptor.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"opioid receptor binding","termid":"GO:0031628"}


id: GO:0045596
data:
  {"annotated_genes":["SJAG_02169","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[92572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell differentiation","type":"exact"},{"name":"down-regulation of cell differentiation","type":"exact"},{"name":"downregulation of cell differentiation","type":"exact"},{"name":"inhibition of cell differentiation","type":"narrow"}],"termid":"GO:0045596","terms_by_termid":{"GO:0051517":null,"GO:0075297":null}}


id: GO:0060144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process occurring in the host cell that contributes to the process of posttranscriptional gene inactivation ('silencing') both of viral gene(s), and host gene(s) homologous to the viral genes.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete host cellular process involved in virus induced gene silencing (obsolete GO:0060144)","termid":"GO:0060144"}


id: MONDO:0014620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myoclonus-dystonia syndrome in which the cause of the disease is a mutation in the KCTD17 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus-dystonia syndrome","termid":"MONDO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"myoclonic dystonia 26","secondary_identifiers":["GARD:16103","OMIM:616398","DOID:0090036","UMLS:C4225341","MEDGEN:904244"],"synonyms":[{"name":"DYT26","type":"related"},{"name":"KCTD17 myoclonus-dystonia syndrome","type":"exact"},{"name":"dystonia 26, myoclonic","type":"related"},{"name":"myoclonic dystonia type 26","type":"exact"},{"name":"myoclonus-dystonia syndrome caused by mutation in KCTD17","type":"exact"}],"termid":"MONDO:0014620","xrefs":{"Monarch":{"xref_id":"0014620"}}}


id: PBO:0046434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxide hydrolase 4","termid":"PBO:0046434"}


id: MONDO:0700270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the ATM gene. Pathogenic germline variation in ATM confers an autosomal dominant predisposition to tumor formation at multiple primary sites, including breast cancer, ovarian cancer, pancreatic cancer, and prostate cancer.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATM-related cancer predisposition","termid":"MONDO:0700270","xrefs":{"Monarch":{"xref_id":"0700270"}}}


id: PBO:0086547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR274C is not an essential gene","termid":"PBO:0086547"}


id: GO:0044030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA methylation (obsolete GO:0044030)","termid":"GO:0044030"}


id: MONDO:0957832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniometadiaphyseal osteosclerosis with hip dysplasia","secondary_identifiers":["MEDGEN:1844026","OMIM:620558","UMLS:C5882710"],"termid":"MONDO:0957832","xrefs":{"Monarch":{"xref_id":"0957832"}}}


id: PBO:0003864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor SpELL","termid":"PBO:0003864"}


id: PBO:0082218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 7 subunit of the 20S proteasome; protein abundance increases in response to DNA replication stress","termid":"PBO:0082218"}


id: PR:O74351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cysteine desulfurase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03272","PANTHER:PTHR11601:SF13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine desulfurase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.11c","secondary_identifiers":["UniProtKB:O74351"],"synonyms":[{"name":"Spom972h-NFS1","type":"exact"}],"termid":"PR:O74351"}


id: PBO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy","termid":"PBO:0001063"}


id: MONDO:0006373
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A non-metastasizing tumor that arises from the adenohypophysial cells of the anterior lobe of the pituitary gland. The tumor can be hormonally functioning or not. The diagnosis can be based on imaging studies and/or radioimmunoassays. Due to its location in the sella turcica, expansion of the tumor mass can impinge on the optic chiasm or involve the temporal lobe, third ventricle and posterior fossa A frequently associated physical finding is bitemporal hemianopsia which may progress to further visual loss.","definition_xrefs":["NCIT:C3329"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"pituitary gland adenoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:PTAD","GARD:19680","MedDRA:10035079","DOID:3829","ICDO:8272/0","EFO:1000478","SCTID:254956000","UMLS:C0032000","MEDGEN:45933","Orphanet:99408","ICD10CM:D35.2","NANDO:2200095"],"synonyms":[{"name":"PTAD","type":"related"},{"name":"adenoma of pituitary","type":"exact"},{"name":"adenoma of pituitary gland","type":"exact"},{"name":"adenoma of the pituitary","type":"exact"},{"name":"adenoma of the pituitary gland","type":"exact"},{"name":"adenoma, anterior lobe pituitary gland, benign","type":"exact"},{"name":"pituitary adenoma","type":"exact"},{"name":"pituitary gland adenoma","type":"exact"}],"termid":"MONDO:0006373","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0006373"}}}


id: MONDO:0018262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fetal anticonvulsant syndrome (obsolete MONDO:0018262)","secondary_identifiers":["Orphanet:370068"],"synonyms":[{"name":"FACS","type":"exact"},{"name":"fetal AEDS","type":"exact"},{"name":"fetal antiepileptic drug syndrome","type":"exact"},{"name":"foetal AEDS","type":"exact"},{"name":"foetal antiepileptic drug syndrome","type":"exact"}],"termid":"MONDO:0018262","xrefs":{"Monarch":{"xref_id":"0018262"}}}


id: PBO:0076699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCERG1 pseudogene 1","termid":"PBO:0076699"}


id: GO:0030223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myeloid precursor cell acquires the specialized features of a neutrophil.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte differentiation","termid":"GO:0030851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil differentiation","synonyms":[{"name":"neutrophil cell differentiation","type":"exact"},{"name":"neutrophil granulocyte differentiation","type":"exact"},{"name":"neutrophil granulocytopoiesis","type":"exact"}],"termid":"GO:0030223"}


id: FYPO:0007705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is normal (i.e. indistinguishable from wild type) when the cell is subject to glucose starvation.","definition_xrefs":["PMID:26443240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to lateral cell cortex during glucose starvation","synonyms":[{"name":"normal protein localisation to lateral cell cortex during glucose starvation","type":"exact"},{"name":"normal protein localization to cell side during glucose starvation","type":"related"},{"name":"normal protein localization to lateral cell cortex during cellular response to glucose starvation","type":"exact"},{"name":"normal protein localization to lateral cell cortex during glucose depletion","type":"exact"},{"name":"normal protein localization to lateral cell cortex during glucose deprivation","type":"exact"},{"name":"normal protein localization to lateral cortex during glucose starvation","type":"exact"}],"termid":"FYPO:0007705"}


id: PBO:0051530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 2 receptor subunit beta","termid":"PBO:0051530"}


id: GO:0046356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"acetyl-CoA catabolic process","synonyms":[{"name":"acetyl-CoA breakdown","type":"exact"},{"name":"acetyl-CoA catabolism","type":"exact"},{"name":"acetyl-CoA degradation","type":"exact"}],"termid":"GO:0046356"}


id: PR:P54789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An origin recognition complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.15","secondary_identifiers":["UniProtKB:P54789"],"synonyms":[{"name":"SPBC29A10.15","type":"related"},{"name":"Spom972h-ORC1","type":"exact"},{"name":"orp1","type":"related"}],"termid":"PR:P54789"}


id: GO:0006691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene metabolic process","secondary_identifiers":["Reactome:R-HSA-2142691"],"synonyms":[{"name":"leukotriene metabolism","type":"exact"}],"termid":"GO:0006691"}


id: PBO:0090746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Esf2","termid":"PBO:0090746"}


id: PBO:0079749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase L5","termid":"PBO:0079749"}


id: MONDO:0044977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of receptor activity (obsolete MONDO:0044977)","termid":"MONDO:0044977","xrefs":{"Monarch":{"xref_id":"0044977"}}}


id: PBO:0075029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-40","termid":"PBO:0075029"}


id: GO:1990161
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homohexameric protein complex that possesses DNA helicase activity; functions during DNA replication and repair.","definition_xrefs":["PMID:17947583","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DnaB helicase complex","synonyms":[{"name":"DnaB hexamer","type":"exact"}],"termid":"GO:1990161"}


id: PBO:0030272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_partial_rereplication","termid":"PBO:0030272"}


id: PBO:0075724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase","termid":"PBO:0075724"}


id: GO:0004957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostaglandin E receptor activity","synonyms":[{"name":"PGE receptor activity","type":"related"},{"name":"PGE(2) receptor activity","type":"exact"}],"termid":"GO:0004957"}


id: SO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL9 RNA leader sequence to the 5' end of an mRNA. SL9 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL9_acceptor_site","synonyms":[{"name":"SL9 acceptor site","type":"exact"}],"termid":"SO:0001754"}


id: GO:0050515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-CDP-2-C-methyl-D-erythritol + ATP = 4-CDP-2-C-methyl-D-erythritol 2-phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:18437","EC:2.7.1.148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity","secondary_identifiers":["MetaCyc:2.7.1.148-RXN","KEGG_REACTION:R05634","GO:0008698"],"synonyms":[{"name":"4-diphosphocytidyl-2-C-methyl-D-erythritol kinase activity","type":"related"},{"name":"4-diphosphocytidyl-2C-methyl-D-erythritol kinase activity","type":"exact"},{"name":"ATP:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol 2-phosphotransferase activity","type":"related"},{"name":"CDP-ME kinase activity","type":"related"},{"name":"CMK activity","type":"related"}],"termid":"GO:0050515"}


id: GO:0046918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent attachment of a palmitoyl group to a nitrogen (N) atom in an N-terminal glycine residue to form N-palmitoyl-glycine.","definition_xrefs":["RESID:AA0339"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-glycine N-palmitoylation (obsolete GO:0046918)","termid":"GO:0046918"}


id: MONDO:0008715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital malformation syndrome characterized by the association of facial and skeletal anomalies with severe intellectual deficit and occasional genitourinary anomalies.","definition_xrefs":["Orphanet:1784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrofrontofacionasal dysostosis","secondary_identifiers":["DOID:0060226","GARD:484","icd11.foundation:700995487","SCTID:720408003","MEDGEN:349729","UMLS:C1860118"],"synonyms":[{"name":"AFFN dysostosis","type":"exact"},{"name":"Affn dysostosis 1","type":"narrow"},{"name":"Richieri-Costa-Colletto syndrome","type":"exact"},{"name":"acro fronto facio nasal dysostosis","type":"related"},{"name":"acrofrontofacionasal dysostosis 1","type":"narrow"},{"name":"acrofrontofacionasal dysostosis syndrome","type":"related"},{"name":"acrofrontofacionasal dysostosis type 1","type":"narrow"},{"name":"cleft Lip/palate with frontonasal dysostosis and postaxial polysyndactyly","type":"related"},{"name":"polysyndactyly, postaxial, frontonasal dysostosis and cleft lip/palate","type":"related"},{"name":"polysyndactyly, postaxial, frontonasal dysostosis, and cleft Lip/palate","type":"related"}],"termid":"MONDO:0008715","xrefs":{"Monarch":{"xref_id":"0008715"}}}


id: GO:0140782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of novofumigatonin, a heavily oxygenated meroterpenoid containing a unique orthoester moiety.","definition_xrefs":["PMID:29968715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"novofumigatonin biosynthetic process","synonyms":[{"name":"novofumigatonin anabolism","type":"exact"},{"name":"novofumigatonin biosynthesis","type":"exact"},{"name":"novofumigatonin formation","type":"exact"},{"name":"novofumigatonin synthesis","type":"exact"}],"termid":"GO:0140782"}


id: GO:0070248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell death by apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"is_a","term_name":"regulation of natural killer cell apoptotic process","termid":"GO:0070247"},{"relation_name":"negatively_regulates","term_name":"natural killer cell apoptotic process","termid":"GO:0070246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell apoptotic process","synonyms":[{"name":"down regulation of natural killer cell apoptosis","type":"exact"},{"name":"down-regulation of natural killer cell apoptosis","type":"exact"},{"name":"downregulation of natural killer cell apoptosis","type":"exact"},{"name":"inhibition of natural killer cell apoptosis","type":"narrow"},{"name":"negative regulation of NK cell apoptosis","type":"exact"},{"name":"negative regulation of natural killer cell apoptosis","type":"narrow"}],"termid":"GO:0070248"}


id: MONDO:0016162
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012399"}]},"cv_name":"mondo","definition":"Bilateral frontal polymicrogyria is one of the rarest subtypes of polymicrogyria. It is a symmetric and bilateral form (in both brain hemispheres) that only involves the frontal lobes without including the area located behind the Sylvius fissure or the area located behind the Rolando sulcus. Some researchers classify the condition into two different forms: bilateral frontal polymicrogyriaand the bilateral frontoparietal. Signs and symptoms included delayed motor and language milestones; spastic (stiffness) hemiparesis (weakness in one side of the body) or quadriparesis (weakness in all four limbs of the body); and mild to moderate intellectual disability. Seizures mayalsobe present. The frontoparietal form is caused by changes (mutations) in the GPR56 gene but the cause for the frontal form of polymicrogyira is still not known. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral polymicrogyria","termid":"MONDO:0017091"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral frontal polymicrogyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10783","icd11.foundation:688947844","UMLS:C5437679","MEDGEN:1754014","DOID:0080921","Orphanet:208444"],"termid":"MONDO:0016162","terms_by_termid":{"MONDO:0012399":null},"xrefs":{"Monarch":{"xref_id":"0016162"}}}


id: GO:0140490
data:
  {"annotated_genes":["SJAG_03835","SJAG_00856","SJAG_01215","SJAG_02886","SJAG_02609","SJAG_01756"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80830,101995,108400,111582,112561,119205],"is_not":false,"summary":null,"term":"GO:0140490"}]},"cv_name":"molecular_function","definition":"The action of a molecule that provides a shape mimicking the end of a microtubule to seed the formation of a new microtubule via self-assembly.","definition_xrefs":["PMID:21993292","PMID:20631709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular template activity","termid":"GO:0140489"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02886":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"microtubule nucleator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"microtubule nucleation template activity","type":"exact"}],"termid":"GO:0140490","terms_by_termid":{"GO:0140490":null}}


id: GO:0150179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine metabolic process.","definition_xrefs":["PMID:30074985","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine metabolic process","termid":"GO:0150179"}


id: GO:0048851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hypophysis are generated and organized. The hypophysis is an endocrine gland that secretes hormones that regulate many other glands.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hypophysis morphogenesis","termid":"GO:0048850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypophysis formation","synonyms":[{"name":"hypophysis biosynthesis","type":"exact"},{"name":"pituitary gland biosynthesis","type":"exact"},{"name":"pituitary gland formation","type":"exact"}],"termid":"GO:0048851"}


id: PBO:0048713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 3 pseudogene 2","termid":"PBO:0048713"}


id: FYPO:0003530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type). The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000257","FYPO:0001312","FYPO:0000298"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"normal intra-S DNA damage checkpoint","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0003530"}


id: R0:0009004
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"'has consumer' is a relation between a material entity and an organism in which the former can normally be digested or otherwise absorbed by the latter without immediate or persistent ill effect.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_consumer","termid":"R0:0009004"}


id: MONDO:1010511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in golden hamsters in which the cause of the disease is a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"cardiomyopathy, golden hamster","termid":"MONDO:1010437"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, SGCD-related, golden hamster","secondary_identifiers":["OMIA:002211-10036"],"termid":"MONDO:1010511","xrefs":{"Monarch":{"xref_id":"1010511"}}}


id: GO:0050205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carbamoyl phosphate + oxamate = oxalurate + phosphate.","definition_xrefs":["RHEA:22984","EC:2.1.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"oxamate carbamoyltransferase activity","secondary_identifiers":["MetaCyc:OXAMATE-CARBAMOYLTRANSFERASE-RXN","KEGG_REACTION:R02937"],"synonyms":[{"name":"carbamoyl-phosphate:oxamate carbamoyltransferase activity","type":"related"},{"name":"oxamic transcarbamylase activity","type":"related"}],"termid":"GO:0050205"}


id: GO:0046649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte activation","termid":"GO:0046649"}


id: SO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes a C_D_box_snoRNA. Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.","definition_xrefs":["PMID:12457565","PMID:22065625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_gene","termid":"SO:0001267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA_gene","synonyms":[{"name":"box C/D snoRNA gene, C D box snoRNA gene, C/D box snoRNA gene","type":"exact"}],"termid":"SO:0002375"}


id: GO:0033483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of an internal steady state of a gas within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete gas homeostasis (obsolete GO:0033483)","termid":"GO:0033483"}


id: MONDO:0011200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A focal dystonia characterized by predominately cervical dystonia that has material basis in variation in the chromosome region 18p.","definition_xrefs":["DOID:0090040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"torsion dystonia 7","secondary_identifiers":["MESH:C566572","GARD:7782","NANDO:1200518","MEDGEN:355560","Orphanet:93963","UMLS:C1865818","OMIM:602124"],"synonyms":[{"name":"DYT7","type":"related"},{"name":"cervical dystonia, primary","type":"related"},{"name":"dystonia 7, torsion","type":"related"},{"name":"dystonia-7, torsion","type":"exact"},{"name":"torsion dystonia type 7","type":"exact"},{"name":"torsion dystonia, focal adult-onset","type":"related"}],"termid":"MONDO:0011200","xrefs":{"Monarch":{"xref_id":"0011200"}}}


id: GO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal tripeptide from a polypeptide at neutral pH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tripeptidyl-peptidase II activity (obsolete GO:0004294)","synonyms":[{"name":"tripeptidyl-peptidase II activity","type":"exact"}],"termid":"GO:0004294"}


id: PBO:0046273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emerin","termid":"PBO:0046273"}


id: PBO:0074534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA G2","termid":"PBO:0074534"}


id: MONDO:0022174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cytogenetic abnormality that refers to the allelic loss of all or part of the short arm of chromosome 12.","definition_xrefs":["NCIT:C36410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 12","termid":"MONDO:0017277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12p deletion","secondary_identifiers":["MESH:C538302","MESH:C538301","GARD:21404","Orphanet:316244","MEDGEN:208640","UMLS:C0795844"],"synonyms":[{"name":"12p del","type":"related"},{"name":"12p deletion","type":"related"},{"name":"12p monosomy","type":"related"},{"name":"12p-","type":"related"},{"name":"del(12p)","type":"related"},{"name":"deletion 12p","type":"related"},{"name":"loss of chromosome 12p","type":"related"},{"name":"monosomy 12p","type":"related"},{"name":"partial deletion of chromosome 12p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 12","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 12","type":"exact"},{"name":"partial monosomy 12p","type":"related"},{"name":"partial monosomy of chromosome 12p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 12","type":"exact"}],"termid":"MONDO:0022174","xrefs":{"Monarch":{"xref_id":"0022174"}}}


id: PBO:0047657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 9","termid":"PBO:0047657"}


id: PBO:0080052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 24","termid":"PBO:0080052"}


id: PBO:0027105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_termination_of_RNA_polymerase_II_transcription_at_rDNA","termid":"PBO:0027105"}


id: PBO:0091749
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1950050_1950051insG","termid":"PBO:0091749"}


id: GO:0047940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronate + ATP = 1-phospho-alpha-D-glucuronate + ADP + 2 H+.","definition_xrefs":["RHEA:17005","EC:2.7.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"glucuronokinase activity","secondary_identifiers":["KEGG_REACTION:R01476","MetaCyc:GLUCURONOKINASE-RXN"],"synonyms":[{"name":"ATP:D-glucuronate 1-phosphotransferase activity","type":"related"},{"name":"glucurono-glucuronokinase activity","type":"related"},{"name":"glucuronokinase (phosphorylating)","type":"related"}],"termid":"GO:0047940"}


id: FYPO:0004980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the equatorial microtubule organizing center is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to cortical microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000935"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to eMTOC during vegetative growth","synonyms":[{"name":"decreased protein localisation to eMTOC during vegetative growth","type":"exact"},{"name":"decreased protein localization to eMTOC during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to equatorial microtubule organizing center during vegetative growth","type":"exact"},{"name":"decreased protein localization to mitotic eMTOC","type":"related"},{"name":"reduced protein localization to eMTOC during vegetative growth","type":"exact"}],"termid":"FYPO:0004980"}


id: MONDO:0009471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary intrinsic factor deficiency","termid":"MONDO:0009852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"intrinsic factor and r binder, combined congenital deficiency of","secondary_identifiers":["MESH:C565461","MEDGEN:340942","GARD:15190","OMIM:243320","UMLS:C1855721"],"synonyms":[{"name":"intrinsic factor and r binder, combined congenital deficiency of","type":"exact"}],"termid":"MONDO:0009471","xrefs":{"Monarch":{"xref_id":"0009471"}}}


id: MONDO:0014567
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87273],"is_not":false,"summary":null,"term":"MONDO:0014567"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"glutamate pyruvate transaminase 2 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070542","NORD:91168","UMLS:C4225388","Orphanet:477673","GARD:17853","MEDGEN:906606","OMIM:616281"],"synonyms":[{"name":"GPT2 Deficiency","type":"exact"},{"name":"GPT2 deficiency","type":"exact"},{"name":"MRT49","type":"exact"},{"name":"glutamate pyruvate transaminase 2 deficiency","type":"exact"},{"name":"mental retardation, autosomal recessive 49","type":"exact"},{"name":"mental retardation, autosomal recessive type 49","type":"exact"},{"name":"neurodevelopmental disorder with microcephaly and spastic paraplegia","type":"exact"},{"name":"postnatal microcephaly-infantile hypotonia-spastic diplegia-dysarthria-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0014567","terms_by_termid":{"MONDO:0014567":null},"xrefs":{"Monarch":{"xref_id":"0014567"}}}


id: MONDO:0006229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the stomach. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C6764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"gastric neuroendocrine neoplasm","termid":"MONDO:0003111"},{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric small cell neuroendocrine carcinoma","secondary_identifiers":["MEDGEN:272664","EFO:1000277","DOID:6552","UMLS:C1333788","ONCOTREE:STSC"],"synonyms":[{"name":"Oat cell carcinoma of stomach","type":"exact"},{"name":"Oat cell carcinoma of the stomach","type":"exact"},{"name":"STSC","type":"related"},{"name":"gastric Oat cell carcinoma","type":"exact"},{"name":"gastric small cell carcinoma","type":"exact"},{"name":"gastric small cell neuroendocrine carcinoma","type":"exact"},{"name":"small cell carcinoma of stomach","type":"exact"},{"name":"small cell carcinoma of the stomach","type":"exact"},{"name":"stomach small cell carcinoma","type":"exact"}],"termid":"MONDO:0006229","xrefs":{"Monarch":{"xref_id":"0006229"}}}


id: PBO:0079124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid stimulating hormone receptor","termid":"PBO:0079124"}


id: GO:0005949
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A heterodimeric enzyme composed of an alpha and beta subunit. Catalyzes the formation of L-2-aminoadipate from L-2-aminoadipate 6-semialdehyde.","definition_xrefs":["EC:1.2.1.31"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoadipate-semialdehyde dehydrogenase complex (obsolete GO:0005949)","synonyms":[{"name":"aminoadipate-semialdehyde dehydrogenase complex","type":"exact"}],"termid":"GO:0005949"}


id: PBO:0043697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 3","termid":"PBO:0043697"}


id: PBO:0031282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_mitotic_cell_cycle","termid":"PBO:0031282"}


id: PBO:0079105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22 domain family member 1","termid":"PBO:0079105"}


id: GO:0010939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of necrotic cell death. Necrotic cell death is a cell death process that is morphologically characterized by a gain in cell volume (oncosis), swelling of organelles, plasma membrane rupture and subsequent loss of intracellular contents.","definition_xrefs":["PMID:16507998"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of necrotic cell death (obsolete GO:0010939)","termid":"GO:0010939"}


id: GO:0048632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle growth.","definition_xrefs":["GOC:lm","PMID:15726494","PMID:15907921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue growth","termid":"GO:0048631"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle tissue growth","termid":"GO:0048630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle tissue growth","synonyms":[{"name":"down regulation of skeletal muscle growth","type":"exact"},{"name":"down-regulation of skeletal muscle growth","type":"exact"},{"name":"downregulation of skeletal muscle growth","type":"exact"},{"name":"inhibition of skeletal muscle growth","type":"narrow"}],"termid":"GO:0048632"}


id: PBO:0028890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_swollen_elongated_germ_tube","termid":"PBO:0028890"}


id: PATO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000155 relative threshold (obsolete PATO:0000155)","termid":"PATO:0000155"}


id: MONDO:0004520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stage 0 includes: pTis, N0, M0, S0. pTis: Intratubular germ cell neoplasia (carcinoma in situ). N0: regional lymph node metastasis. M0: No distant metastasis. S0: Marker study levels within normal limits. (AJCC 6th and 7th eds.)","definition_xrefs":["NCIT:C7325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular embryonal carcinoma","termid":"MONDO:0006446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intratubular embryonal carcinoma","secondary_identifiers":["DOID:8275","MEDGEN:1832671","NCIT:C192096","UMLS:C5784893"],"synonyms":[{"name":"intratubular embryonal carcinoma","type":"exact"},{"name":"stage 0 testicular embryonal carcinoma","type":"exact"},{"name":"stage 0 testicular embryonal carcinoma aJCC v6","type":"exact"},{"name":"stage 0 testicular embryonal carcinoma aJCC v6 and v7","type":"exact"},{"name":"stage 0 testicular embryonal carcinoma aJCC v7","type":"exact"}],"termid":"MONDO:0004520","xrefs":{"Monarch":{"xref_id":"0004520"}}}


id: PBO:0091051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane calcium ion import channel Cch1","termid":"PBO:0091051"}


id: PBO:0054020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1350","termid":"PBO:0054020"}


id: PBO:0053391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 319","termid":"PBO:0053391"}


id: PBO:0036538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricase Uro1","termid":"PBO:0036538"}


id: GO:0110002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tRNA methylation.","definition_xrefs":["GOC:vw","PMID:23074192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA processing","termid":"GO:2000235"},{"relation_name":"regulates","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"regulation of tRNA methylation","termid":"GO:0110002"}


id: MOD:01222
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-formyl-L-serine.","definition_xrefs":["PubMed:15799070","Unimod:122#S","PubMed:15627961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-formylated residue","termid":"MOD:01483"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-formyl-L-serine","synonyms":[{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"}],"termid":"MOD:01222"}


id: PBO:0083207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL197C/UBP12","termid":"PBO:0083207"}


id: GO:0009877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of nitrogen-fixing root nodules on plant roots.","definition_xrefs":["PMID:21856632","PMID:33317178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nodulation","secondary_identifiers":["GO:0009878"],"synonyms":[{"name":"nodule development","type":"exact"},{"name":"nodule formation","type":"exact"},{"name":"nodule morphogenesis","type":"related"}],"termid":"GO:0009877"}


id: GO:0061642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuron growth cone is directed to a specific target site in response to an attractive chemical signal.","definition_xrefs":["GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of axon","termid":"GO:0061642"}


id: PBO:0062698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily C member 4 pseudogene","termid":"PBO:0062698"}


id: PBO:0084900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial transporter repressible by thiamine; THI74 has a paralog, YML018C, that arose from the whole genome duplication; shows sequence homology to human gene SLC35F3, a thiamine transporter implicated in hypertension","termid":"PBO:0084900"}


id: PBO:0058471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5579","termid":"PBO:0058471"}


id: GO:0018218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The phosphorylation of peptidyl-cysteine to form peptidyl-S-phospho-L-cysteine.","definition_xrefs":["RESID:AA0034"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine phosphorylation (obsolete GO:0018218)","termid":"GO:0018218"}


id: PR:O42889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8E4.05c gene.","definition_xrefs":["UniProtKB:O42889","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E4.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.05c","synonyms":[{"name":"Spom972h-SPBC8E4.05c","type":"exact"}],"termid":"PR:O42889"}


id: MOD:01612
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-iodo-L-tyrosine.","definition_xrefs":["PubMed:8995307","ChEBI:27847","RESID:AA0509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoiodinated tyrosine","termid":"MOD:01228"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-iodo-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-hydroxy-3-iodophenyl)propanoic acid","type":"exact"},{"name":"3'-iodo-L-tyrosine","type":"exact"},{"name":"3-iodo-L-tyrosine","type":"exact"},{"name":"3-iodotyrosine","type":"exact"},{"name":"4-hydroxy-3-iodo-phenylalanine","type":"exact"},{"name":"MIT","type":"exact"},{"name":"MOD_RES Iodotyrosine","type":"exact"}],"termid":"MOD:01612"}


id: PBO:0080248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 11, pseudogene","termid":"PBO:0080248"}


id: PBO:0027923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_protein_aggregate_level","termid":"PBO:0027923"}


id: PBO:0003737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Pfa3 (predicted)","termid":"PBO:0003737"}


id: SO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of a mobile element when comparing a reference sequence (has mobile element) to a individual sequence (does not have mobile element).","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deletion","termid":"SO:0000159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_element_deletion","synonyms":[{"name":"mobile element deletion","type":"exact"}],"termid":"SO:0002066"}


id: PBO:0084942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multidrug efflux pump of the major facilitator superfamily; required for resistance to aminotriazole and 4-nitroquinoline-N-oxide; ATR1 has a paralog, YMR279C, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0084942"}


id: PBO:0052734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 26","termid":"PBO:0052734"}


id: PBO:0079514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidine phosphorylase","termid":"PBO:0079514"}


id: GO:0071894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A histone ubiquitination process in which a ubiquitin monomer is added to a conserved lysine residue in the C-terminus of histone H2B. The conserved lysine residue is K119 in fission yeast, K123 in budding yeast, and K120 in mammals.","definition_xrefs":["GOC:mah","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:0071894)","synonyms":[{"name":"budding yeast H2B K123 ubiquitination","type":"narrow"},{"name":"fission yeast H2B K119 ubiquitination","type":"narrow"},{"name":"mammalian H2B K120 ubiquitination","type":"narrow"}],"termid":"GO:0071894"}


id: GO:0033432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CGG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"CGG codon-amino acid adaptor activity","synonyms":[{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033432"}


id: GO:1904309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cordycepin stimulus.","definition_xrefs":["GO_REF:0000071","PMID:21597460","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cordycepin","synonyms":[{"name":"response to 3'-deoxyadenosine","type":"exact"}],"termid":"GO:1904309"}


id: FYPO:0006834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of primary cell septum biogenesis is increased.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of primary cell septum biogenesis","synonyms":[{"name":"decreased duration of primary cell septum biogenesis","type":"related"},{"name":"increased rate of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"increased rate of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"increased rate of primary septum biogenesis","type":"exact"},{"name":"increased rate of primary septum synthesis","type":"related"}],"termid":"FYPO:0006834"}


id: MONDO:0100573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epilepsy where patients have both generalized and focal seizure types, with interictal and/or ictal EEG findings that accompany both seizure types. Patients with Dravet syndrome and Lennox-Gastaut syndrome may have combined focal and generalized epilepsy.","direct_ancestors":[{"relation_name":"is_a","term_name":"focal epilepsy","termid":"MONDO:0005384"},{"relation_name":"is_a","term_name":"generalized epilepsy","termid":"MONDO:0100574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"combined generalized and focal epilepsy","secondary_identifiers":["UMLS:C5816884","MEDGEN:1836943"],"termid":"MONDO:0100573","xrefs":{"Monarch":{"xref_id":"0100573"}}}


id: PBO:0065819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5A, member RAS oncogene family","termid":"PBO:0065819"}


id: FYPO:0004191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydroxyurea is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to hydroxyurea","synonyms":[{"name":"increased RNA accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased RNA level during cellular response to HU","type":"exact"},{"name":"increased RNA level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to hydroxyurea","type":"narrow"},{"name":"increased transcript level during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004191"}


id: PR:Q9C0V7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An arylsulfatase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized sulfatase PB10D8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB10D8.02c","secondary_identifiers":["UniProtKB:Q9C0V7"],"synonyms":[{"name":"Spom972h-ARSB","type":"exact"}],"termid":"PR:Q9C0V7"}


id: PBO:0031758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_centromere","termid":"PBO:0031758"}


id: PBO:0091725
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene was called cdc2L (cdc2 left) in PMID:16453669, name not added as potentially misleading","termid":"PBO:0091725"}


id: PBO:0048026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled related protein","termid":"PBO:0048026"}


id: GO:1900406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of conjugation with cellular fusion.","definition_xrefs":["GOC:mah","PMID:1112904","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900406)","termid":"GO:1900406"}


id: GO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stereocilia coupling link that is composed of a fine filament present in developing stereocilia that couples the bases of individual stereocilia to one another. They are not present in mature stereocilia.","definition_xrefs":["PMID:17567809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia coupling link","termid":"GO:0002139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia ankle link","termid":"GO:0002141"}


id: MONDO:0015003
data:
  {"annotated_genes":["SJAG_02007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88846],"is_not":false,"summary":null,"term":"MONDO:0015003"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipoic acid biosynthesis defect","termid":"MONDO:0018424"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0003441","MONDO:0005559","MONDO:0004069","MONDO:0002525"],"is_obsolete":false,"name":"dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934601","DOID:0081419","GARD:13488","OMIM:617282","Orphanet:508093","UMLS:C4310634"],"synonyms":[{"name":"DYTOABG","type":"exact"},{"name":"dystonia 29, childhood-onset","type":"related"},{"name":"dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities","type":"exact"},{"name":"dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities; DYTOABG","type":"exact"}],"termid":"MONDO:0015003","terms_by_termid":{"MONDO:0015003":null},"xrefs":{"Monarch":{"xref_id":"0015003"}}}


id: PBO:0062279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 15","termid":"PBO:0062279"}


id: PBO:0071511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 14","termid":"PBO:0071511"}


id: PBO:0084124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heterotrimeric nascent polypeptide-associated complex beta3 subunit; complex binds ribosomes via its beta-subunits in close proximity to nascent polypeptides; interacts with Caf130p of the CCR4-NOT complex; similar to human BTF3; BTT1 has a paralog, EGD1, that arose from the whole genome duplication","termid":"PBO:0084124"}


id: PBO:0048093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 14","termid":"PBO:0048093"}


id: GO:0070696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor that spans a cell membrane and possesses protein serine/threonine kinase activity.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor serine/threonine kinase binding","termid":"GO:0033612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"transmembrane receptor protein serine/threonine kinase binding","termid":"GO:0070696"}


id: GO:0106112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cohesin ssDNA (lagging strand) loading.","definition_xrefs":["PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitotic cohesin ssDNA (lagging strand) loading (obsolete GO:0106112)","termid":"GO:0106112"}


id: MONDO:1012723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa that occurs in dogs due to a mutation in the LAMA3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa, dog","termid":"MONDO:1011548"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional epidermolysis bullosa, LAMA3-related, dog","secondary_identifiers":["OMIA:001677-9615"],"synonyms":[{"name":"epidermolysis bullosa, junctionalis, LAMA3-related, dog","type":"exact"}],"termid":"MONDO:1012723","xrefs":{"Monarch":{"xref_id":"1012723"}}}


id: PBO:0043239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Leyden crystal protein pseudogene 1","termid":"PBO:0043239"}


id: FYPO:0006645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during metaphase is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PomBase:mah","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during metaphase","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during metaphase","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during metaphase during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006645"}


id: PR:Q09898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sid2 gene.","definition_xrefs":["UniProtKB:Q09898","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase sid2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.11c","synonyms":[{"name":"Spom972h-sid2","type":"exact"}],"termid":"PR:Q09898"}


id: PBO:0029635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_growth","termid":"PBO:0029635"}


id: PR:P40977
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.11","secondary_identifiers":["UniProtKB:P40977"],"synonyms":[{"name":"PLC-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PLCD4","type":"exact"},{"name":"phospholipase C-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40977"}


id: GO:0006775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"fat-soluble vitamin metabolic process","secondary_identifiers":["Reactome:R-HSA-6806667"],"synonyms":[{"name":"fat-soluble vitamin metabolism","type":"exact"}],"termid":"GO:0006775"}


id: PBO:0109294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in head and neck cancer 2","termid":"PBO:0109294"}


id: PBO:0070363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 1","termid":"PBO:0070363"}


id: FYPO:0003260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of splicing of RNA primary transcripts at sites that are not normally frequently used is decreased.","definition_xrefs":["PMID:24210919","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA splicing, via splicosome","termid":"FYPO:0003040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA splicing at cryptic splice sites","synonyms":[{"name":"decreased RNA splicing at cryptic splice sites during mitotic cell cycle","type":"related"},{"name":"decreased RNA splicing at cryptic splice sites during vegetative growth","type":"exact"},{"name":"decreased RNA splicing of cryptic introns","type":"exact"},{"name":"reduced RNA splicing at cryptic splice sites","type":"exact"}],"termid":"FYPO:0003260"}


id: PBO:0073223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 6D","termid":"PBO:0073223"}


id: GO:0002920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a humoral immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of humoral immune response","termid":"GO:0002920"}


id: GO:0036027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and urokinase-type plasminogen activator (PLAU); formation of the complex inhibits the serine protease activity of urokinase-type plasminogen activator.","definition_xrefs":["GOC:ans","PMID:3501295","PMID:8536714","PMID:10340997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-PLAU complex","synonyms":[{"name":"PCI-PLAU complex","type":"exact"},{"name":"SERPINA5-PLAU complex","type":"exact"},{"name":"plasma serine protease inhibitor-PLAU complex","type":"exact"},{"name":"protein C inhibitor-U-plasminogen activator complex","type":"exact"},{"name":"protein C inhibitor-uPA complex","type":"exact"},{"name":"protein C inhibitor-urokinase-type plasminogen activator complex","type":"exact"},{"name":"serpin A5-PLAU complex","type":"exact"}],"termid":"GO:0036027"}


id: GO:0021802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial migration of cells from the ventricular zone that is independent of radial glial cells. Cells extend processes that terminate at the pial surface and follow the processes as they migrate.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex radially oriented cell migration","termid":"GO:0021799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somal translocation","synonyms":[{"name":"perikaryal translocation of Morest","type":"exact"}],"termid":"GO:0021802"}


id: GO:0090140
data:
  {"annotated_genes":["SJAG_04203","SJAG_01212"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[110847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01212":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"regulation of mitochondrial fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrial division","type":"exact"}],"termid":"GO:0090140","terms_by_termid":{"GO:0090141":null,"GO:0090258":null}}


id: RO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a 'neuron projection bundle' and a region in which one or more of its component neuron projections either synapses to targets or receives synaptic input.\\nT innervates some R\\nExpands_to: T has_fasciculating_neuron_projection that synapse_in some R.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innervates","termid":"RO:0002134"}


id: MONDO:0006611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation of non-necrotizing granulomas in the skin. It may be a manifestation of systemic sarcoidosis or may also arise in isolation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin sarcoidosis","secondary_identifiers":["EFO:1000767","UMLS:C0036203","Wikipedia:Cutaneous_manifestations_of_sarcoidosis","ICD10CM:D86.3","MEDGEN:19872","SCTID:55941000","DOID:13402","NCIT:C34996"],"synonyms":[{"name":"cutaneous sarcoid","type":"exact"},{"name":"cutaneous sarcoidosis","type":"exact"},{"name":"sarcoidosis of zone of skin","type":"exact"},{"name":"zone of skin sarcoidosis","type":"exact"}],"termid":"MONDO:0006611","xrefs":{"Monarch":{"xref_id":"0006611"}}}


id: PBO:0029374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0029374"}


id: PBO:0062301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 12 pseudogene","termid":"PBO:0062301"}


id: PATO:0002436
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's position being displaced from a reference point.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"offset","termid":"PATO:0002436"}


id: PBO:0085082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear dsRNA-specific ribonuclease (RNase III); involved in rDNA transcription, rRNA processing and U2 snRNA 3' end formation by cleavage of a stem-loop structure at the 3' end of U2 snRNA; involved in polyadenylation-independent transcription termination; involved in the cell wall stress response, regulating the degradation of cell wall integrity and morphogenesis checkpoint genes","termid":"PBO:0085082"}


id: GO:0034997
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that comprises one integrin alphav subunit, one integrin beta5 subunit, and vitronectin.","definition_xrefs":["PMID:1694173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alphav-beta5 integrin-vitronectin complex","synonyms":[{"name":"ITGAV-ITGB5-VTN complex","type":"narrow"}],"termid":"GO:0034997"}


id: GO:0006211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of 5-methylcytosine, a methylated base of DNA.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-methylcytosine catabolic process (obsolete GO:0006211)","synonyms":[{"name":"5-methylcytosine breakdown","type":"exact"},{"name":"5-methylcytosine catabolism","type":"exact"},{"name":"5-methylcytosine degradation","type":"exact"}],"termid":"GO:0006211"}


id: GO:0047702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3S)-3,6-diaminohexanoate = (3S,5S)-3,5-diaminohexanoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-lysine 5,6-aminomutase activity (obsolete GO:0047702)","synonyms":[{"name":"b-lysine 5,6-aminomutase activity","type":"exact"}],"termid":"GO:0047702"}


id: FYECO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Inositol was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000066 absence of inositol (obsolete FYECO:0000066)","termid":"FYECO:0000066"}


id: GO:2000310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of N-methyl-D-aspartate selective glutamate receptor activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter receptor activity","termid":"GO:0099601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of NMDA receptor activity","secondary_identifiers":["Reactome:R-HSA-438066"],"synonyms":[{"name":"regulation of N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"}],"termid":"GO:2000310"}


id: PBO:0004184
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exchange Factor Cdc25-like","termid":"PBO:0004184"}


id: GO:0033144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of any intracellular steroid hormone receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of intracellular steroid hormone receptor signaling pathway","synonyms":[{"name":"negative regulation of steroid hormone receptor signaling pathway","type":"broad"},{"name":"negative regulation of steroid hormone receptor signalling pathway","type":"broad"}],"termid":"GO:0033144"}


id: MONDO:1012087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alpha fucosidosis, non-human animal","termid":"MONDO:1011783"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha fucosidosis, dog","secondary_identifiers":["OMIA:000396-9615"],"termid":"MONDO:1012087","xrefs":{"Monarch":{"xref_id":"1012087"}}}


id: GO:0032099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces appetite.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to food","termid":"GO:0032096"},{"relation_name":"is_a","term_name":"regulation of appetite","termid":"GO:0032098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of appetite","synonyms":[{"name":"appetite suppression","type":"related"},{"name":"down regulation of appetite","type":"exact"},{"name":"down-regulation of appetite","type":"exact"},{"name":"downregulation of appetite","type":"exact"},{"name":"inhibition of appetite","type":"narrow"},{"name":"negative regulation of hunger","type":"related"}],"termid":"GO:0032099"}


id: PBO:0042071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC140 long non-coding RNA","termid":"PBO:0042071"}


id: MONDO:1010617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital hypothyroidism in pigs in which the cause of the disease is a mutation in the DUOX2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, DUOX2-related, pig","secondary_identifiers":["OMIA:002210-9823"],"termid":"MONDO:1010617","xrefs":{"Monarch":{"xref_id":"1010617"}}}


id: SO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Messenger RNA sequences that are untranslated and lie five prime or three prime to sequences which are translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR","synonyms":[{"name":"untranslated region","type":"exact"}],"termid":"SO:0000203"}


id: GO:1900768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fonsecin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"fonsecin metabolic process","termid":"GO:1900767"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone catabolic process","termid":"GO:1900786"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"fonsecin catabolic process","synonyms":[{"name":"fonsecin breakdown","type":"exact"},{"name":"fonsecin catabolism","type":"exact"},{"name":"fonsecin degradation","type":"exact"}],"termid":"GO:1900768"}


id: PBO:0063763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 3","termid":"PBO:0063763"}


id: PBO:0070641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 12","termid":"PBO:0070641"}


id: GO:0010200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chitin","termid":"GO:0010200"}


id: PBO:0043542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin pseudogene 1","termid":"PBO:0043542"}


id: PBO:0018178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Spc25","termid":"PBO:0018178"}


id: MOD:01903
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks two L-serine residues to form serine oxazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0574","PubMed:21568297","PubMed:21950656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine oxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S)-1-azanyl-2-hydroxyethyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazole-4-carboxylic acid (Ser-Ser)","type":"exact"},{"name":"L-serine oxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01903"}


id: GO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a gamma-delta T cell population by cell division as part of an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"},{"relation_name":"is_a","term_name":"T cell proliferation involved in immune response","termid":"GO:0002309"},{"relation_name":"is_a","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell proliferation involved in immune response","synonyms":[{"name":"gamma-delta T cell proliferation during immune response","type":"related"},{"name":"gamma-delta T lymphocyte proliferation during immune response","type":"related"},{"name":"gamma-delta T-cell proliferation during immune response","type":"related"},{"name":"gamma-delta T-lymphocyte proliferation during immune response","type":"related"}],"termid":"GO:0002311"}


id: MONDO:0023152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrocartilaginous embolism (FCE) is a rare type of embolism (sudden blocking of an artery) that occurs in the spinal cord. FCE occurs when materials that are usually found within the vertebral disk of the spine enter into the nearby vascular system (veins and arteries) and block one of the spinal cord vessels. The signs and symptoms of FCE often develop after a minor or even unnoticed btriggering eventb such as lifting, straining, or falling. Symptoms of FCE may include neck and/or back pain, progressive muscle weakness, and paralysis.The exact underlying cause of FCE is poorly understood. Most cases occur sporadically in people with no family history of the disease. Diagnosis is based on imaging of the spinal cord and ruling out other causes of a blockage of the vascular system within the spinal cord. Treatment is generally focused on preventing possible complications and improving quality of life with medications and physical therapy.","definition_xrefs":["GARD:0009718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrocartilaginous embolism","secondary_identifiers":["UMLS:C2931666","MEDGEN:419466","MESH:C537927"],"synonyms":[{"name":"embolism, fibrocartilaginous","type":"related"}],"termid":"MONDO:0023152","xrefs":{"Monarch":{"xref_id":"0023152"}}}


id: SO:1000157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal transition where the segment between the first two breaks listed is removed and inserted at the third break; the insertion is in cytologically the same orientation as its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_transposition","termid":"SO:1000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninverted_interchromosomal_transposition","synonyms":[{"name":"(Drosophila)eTp","type":"related"},{"name":"uninverted interchromosomal transposition","type":"exact"}],"termid":"SO:1000157"}


id: GO:0033645
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collection of membranous structures involved in transport within the host cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endomembrane system","termid":"GO:0033645"}


id: PBO:0090447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, implicated in DNA repair","termid":"PBO:0090447"}


id: _global:positively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of positively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulated_by","secondary_identifiers":["RO:0002336"],"termid":"_global:positively_regulated_by"}


id: GO:0005865
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofilament","termid":"GO:0036379"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005737","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"striated muscle thin filament","termid":"GO:0005865"}


id: GO:0033796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reduction of elemental sulfur or polysulfide to hydrogen sulfide, H2 + n sulfur = H+ + hydrogen sulfide + (n-1) sulfur.","definition_xrefs":["RHEA:35591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","termid":"GO:0046995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sulfur reductase activity","secondary_identifiers":["EC:1.12.98.4","MetaCyc:RXN-8269"],"synonyms":[{"name":"(donor):sulfur oxidoreductase activity","type":"related"},{"name":"sulphur reductase activity","type":"exact"}],"termid":"GO:0033796"}


id: MONDO:0011962
data:
  {"annotated_genes":["SJAG_02748","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86881,89095],"is_not":false,"summary":null,"term":"MONDO:0011962"}]},"cv_name":"mondo","definition":"Primary or metastatic malignant neoplasm involving the endometrium (mucous membrane that lines the endometrial cavity).","definition_xrefs":["NCIT:C27815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"},{"relation_name":"is_a","term_name":"endometrium neoplasm","termid":"MONDO:0021251"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:2840","DOID:1380","UMLS:C0007103","OMIM:608089"],"synonyms":[{"name":"cancer of endometrium","type":"exact"},{"name":"endometrial Ca","type":"exact"},{"name":"endometrial cancer","type":"exact"},{"name":"endometrial cancer, familial, autosomal dominant, somatic mutation","type":"exact"},{"name":"endometrial cancer, susceptibility to, autosomal dominant, somatic mutation","type":"exact"},{"name":"endometrial carcinoma, somatic","type":"exact"},{"name":"endometrial neoplasm","type":"broad"},{"name":"endometrium cancer","type":"exact"},{"name":"malignant endometrial neoplasm","type":"exact"},{"name":"malignant endometrium neoplasm","type":"exact"},{"name":"malignant neoplasm of endometrium","type":"exact"},{"name":"neoplasm of endometrium","type":"broad"},{"name":"primary malignant neoplasm of endometrium","type":"exact"},{"name":"tumor of endometrium","type":"broad"},{"name":"tumour of endometrium","type":"broad"}],"termid":"MONDO:0011962","terms_by_termid":{"MONDO:0011962":null},"xrefs":{"Monarch":{"xref_id":"0011962"}}}


id: GO:0004148
data:
  {"annotated_genes":["SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73524],"is_not":false,"summary":null,"term":"GO:0004148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-[(R)-dihydrolipoyl]-L-lysyl-[protein] + NAD+ = N(6)-[(R)-lipoyl]-L-lysyl-[protein] + NADH + H+.","definition_xrefs":["RHEA:15045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydrolipoyl dehydrogenase (NADH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9859172","Reactome:R-HSA-5694018","Reactome:R-HSA-9853499","MetaCyc:1.8.1.4-RXN","EC:1.8.1.4","Reactome:R-HSA-1222412","Reactome:R-HSA-9858589","Reactome:R-HSA-9861616","Reactome:R-HSA-9907572"],"synonyms":[{"name":"E3 component of alpha-ketoacid dehydrogenase complexes activity","type":"related"},{"name":"L-protein activity","type":"related"},{"name":"LDP-Glc activity","type":"narrow"},{"name":"LDP-Val activity","type":"narrow"},{"name":"dehydrolipoate dehydrogenase activity","type":"related"},{"name":"diaphorase activity","type":"related"},{"name":"dihydrolipoamide dehydrogenase activity","type":"related"},{"name":"dihydrolipoamide reduction","type":"related"},{"name":"dihydrolipoamide:NAD+ oxidoreductase","type":"related"},{"name":"dihydrolipoic dehydrogenase activity","type":"related"},{"name":"dihydrolipoylprotein reduction","type":"related"},{"name":"dihydrothioctic dehydrogenase activity","type":"related"},{"name":"glycine-cleavage system L-protein activity","type":"related"},{"name":"lipoamide dehydrogenase (NADH) activity","type":"related"},{"name":"lipoamide oxidoreductase (NADH) activity","type":"related"},{"name":"lipoamide reductase (NADH) activity","type":"related"},{"name":"lipoamide reductase activity","type":"related"},{"name":"lipoate dehydrogenase activity","type":"related"},{"name":"lipoic acid dehydrogenase activity","type":"related"},{"name":"lipoyl dehydrogenase activity","type":"related"},{"name":"protein-6-N-(dihydrolipoyl)lysine:NAD+ oxidoreductase","type":"related"},{"name":"protein-N6-(dihydrolipoyl)lysine:NAD+ oxidoreductase","type":"related"}],"termid":"GO:0004148","terms_by_termid":{"GO:0004148":null}}


id: GO:0021569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:curators","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 development","termid":"GO:0021569"}


id: MONDO:0015202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete babesiosis (obsolete MONDO:0015202)","termid":"MONDO:0015202","xrefs":{"Monarch":{"xref_id":"0015202"}}}


id: PBO:0072505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 34","termid":"PBO:0072505"}


id: PBO:0070699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 3","termid":"PBO:0070699"}


id: PBO:0074982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-24","termid":"PBO:0074982"}


id: MONDO:0004653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myelodysplastic/myeloproliferative neoplasm characterized by the principal involvement of the neutrophil series with leukocytosis and multilineage dysplasia. The neoplastic cells do not have a Philadelphia chromosome or the BCR/ABL fusion gene. (WHO, 2001)","definition_xrefs":["NCIT:C3519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukemia","termid":"MONDO:0004643"},{"relation_name":"is_a","term_name":"myelodysplastic/myeloproliferative neoplasm","termid":"MONDO:0006311"},{"relation_name":"is_a","term_name":"myelodysplastic/myeloproliferative disease","termid":"MONDO:0020077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"atypical chronic myeloid leukemia, BCR-ABL1 negative","secondary_identifiers":["DOID:8747","MedDRA:10054651","MEDGEN:266233","ICDO:9876/3","GARD:19583","DOID:0060597","Orphanet:98824","SCTID:277589003","UMLS:C1292772","icd11.foundation:331838766"],"synonyms":[{"name":"aCML","type":"exact"},{"name":"atypical CML","type":"exact"},{"name":"atypical chronic myeloid leukaemia","type":"exact"},{"name":"atypical chronic myeloid leukaemia BCR-ABL1 negative","type":"exact"},{"name":"atypical chronic myeloid leukemia","type":"exact"},{"name":"atypical chronic myeloid leukemia BCR-ABL1 negative","type":"exact"},{"name":"atypical chronic myeloid leukemia, BCR-ABL1 Negative","type":"exact"},{"name":"subacute granulocytic leukaemia","type":"exact"},{"name":"subacute granulocytic leukemia","type":"exact"},{"name":"subacute myelogenous leukaemia","type":"exact"},{"name":"subacute myelogenous leukemia","type":"exact"},{"name":"subacute myeloid leukaemia","type":"exact"},{"name":"subacute myeloid leukemia","type":"exact"}],"termid":"MONDO:0004653","xrefs":{"Monarch":{"xref_id":"0004653"}}}


id: PBO:0028959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_UDP-galactose_transmembrane_transport","termid":"PBO:0028959"}


id: FYPO:0003972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which exit from mitosis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000337","FYPO:0001985"],"is_obsolete":false,"name":"abnormal exit from mitosis","synonyms":[{"name":"abnormal exit from mitosis during mitotic cell cycle","type":"related"},{"name":"abnormal exit from mitosis during vegetative growth","type":"exact"},{"name":"abnormal mitotic exit","type":"exact"}],"termid":"FYPO:0003972"}


id: PBO:0072702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RuvB like AAA ATPase 2","termid":"PBO:0072702"}


id: PBO:0070009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1306, pseudogene","termid":"PBO:0070009"}


id: PBO:0005137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain protein Cue1/4 family involved in ER associated protein catabolism (predicted)","termid":"PBO:0005137"}


id: GO:0047876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + oligoglycosylglucosylceramide = ceramide + oligoglycosylglucose.","definition_xrefs":["EC:3.2.1.123","MetaCyc:ENDOGLYCOSYLCERAMIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"endoglycosylceramidase activity","secondary_identifiers":["RHEA:22288"],"synonyms":[{"name":"EGCase activity","type":"related"},{"name":"endo-glucosylceramidase activity","type":"related"},{"name":"endoglycoceramidase activity","type":"related"},{"name":"glycosyl-N-acetyl-sphingosine 1,1-beta-D-glucanohydrolase activity","type":"related"},{"name":"oligoglycosylglucosylceramide glycohydrolase activity","type":"related"}],"termid":"GO:0047876"}


id: PBO:0081519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 428","termid":"PBO:0081519"}


id: GO:0039582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host PKR (protein kinase regulated by RNA) activity by promoting the localization of PKR in the nucleus. For example, human cytomegalovirus (HMCV) gene products directly interact with PKR and inhibit its activation by sequestering it in the nucleus, away from both its activator (cytoplasmic dsRNA) and its substrate, (eIF2alpha).","definition_xrefs":["PMID:16987971"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host PKR activity by positive regulation of PKR nuclear localization (obsolete GO:0039582)","synonyms":[{"name":"suppression by virus of host PKR activity by nuclear sequestration of PKR","type":"exact"},{"name":"suppression by virus of host PKR activity by positive regulation of PKR localization to nucleus","type":"exact"},{"name":"suppression by virus of host PKR activity by sequestering of PKR in nucleus","type":"exact"}],"termid":"GO:0039582"}


id: GO:0021909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","PMID:11262869"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in spinal cord anterior-posterior patterning (obsolete GO:0021909)","termid":"GO:0021909"}


id: PR:O59770
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04533","PANTHER:PTHR11599:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.04c","secondary_identifiers":["UniProtKB:O59770"],"synonyms":[{"name":"Spom972h-PSMA3","type":"exact"}],"termid":"PR:O59770"}


id: PBO:0041859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 5","termid":"PBO:0041859"}


id: GO:0042311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the internal diameter of blood vessels, especially arterioles or capillaries, due to relaxation of smooth muscle cells that line the vessels, and usually resulting in a decrease in blood pressure.","definition_xrefs":["GOC:pr","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasodilation","secondary_identifiers":["GO:0045909","Wikipedia:Vasodilation"],"synonyms":[{"name":"positive regulation of blood vessel size","type":"exact"},{"name":"vasodilatation","type":"exact"}],"termid":"GO:0042311"}


id: MONDO:0023539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0023539 (obsolete MONDO:0023539)","termid":"MONDO:0023539","xrefs":{"Monarch":{"xref_id":"0023539"}}}


id: PBO:0002256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIH regulator Mms19","termid":"PBO:0002256"}


id: GO:0036494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, or increases the frequency, rate or extent of translation initiation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation in response to stress","termid":"GO:0032058"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"},{"relation_name":"is_a","term_name":"positive regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"positive regulation of translation initiation in response to ER stress","type":"exact"}],"termid":"GO:0036494"}


id: GO:0062109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of DNA recombinase disassembly, the disaggregation of a DNA recombinase complex into its constituent components.","definition_xrefs":["PMID:30297419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"DNA recombinase disassembly","termid":"GO:1990986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of DNA recombinase disassembly","termid":"GO:0062109"}


id: PBO:0088908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Npr3","termid":"PBO:0088908"}


id: SO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short tandem repeat expansion with an increase in a sequence of three nucleotide units repeated in tandem compared to a reference sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"short_tandem_repeat_expansion","termid":"SO:0002162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide_repeat_expansion","synonyms":[{"name":"trinucleotide repeat expansion","type":"exact"}],"termid":"SO:0002165"}


id: PBO:0084591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YFL043C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YFL042C","termid":"PBO:0084591"}


id: PBO:0080715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WRN RecQ like helicase","termid":"PBO:0080715"}


id: PBO:0088404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNP complex","termid":"PBO:0088404"}


id: GO:0004990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with oxytocin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"oxytocin receptor activity","termid":"GO:0004990"}


id: GO:1900502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of butyryl-CoA catabolic process to butyrate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA catabolic process to butyrate","termid":"GO:1900500"},{"relation_name":"positively_regulates","term_name":"butyryl-CoA catabolic process to butyrate","termid":"GO:0044581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0006629","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"positive regulation of butyryl-CoA catabolic process to butyrate","synonyms":[{"name":"activation of butyryl-CoA catabolic process to butyrate","type":"narrow"},{"name":"activation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"positive regulation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"up regulation of butyryl-CoA catabolic process to butyrate","type":"exact"},{"name":"up regulation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"up-regulation of butyryl-CoA catabolic process to butyrate","type":"exact"},{"name":"up-regulation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"upregulation of butyryl-CoA catabolic process to butyrate","type":"exact"},{"name":"upregulation of butyryl-CoA catabolism to butyrate","type":"exact"}],"termid":"GO:1900502"}


id: GO:0090592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis of DNA that is a part of the process of duplicating one or more molecules of DNA.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"},{"relation_name":"part_of","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"}


id: GO:0018152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-tyrosine to form a 3'-(1'-L-histidyl)-L-tyrosine protein cross-link.","definition_xrefs":["RESID:AA0270"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(1'-L-histidyl)-L-tyrosine (obsolete GO:0018152)","termid":"GO:0018152"}


id: MONDO:0014394
data:
  {"annotated_genes":["SJAG_03254"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88226],"is_not":false,"summary":null,"term":"MONDO:0014394"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPS29 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:863078","OMIM:615909","UMLS:C4014641","DOID:0111889","GARD:16030"],"synonyms":[{"name":"DBA13","type":"related"},{"name":"Diamond-Blackfan Anaemia type 13","type":"exact"},{"name":"Diamond-Blackfan Anemia type 13","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPS29","type":"exact"},{"name":"Diamond-Blackfan anemia 13","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPS29","type":"exact"},{"name":"RPS29 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPS29 Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0014394","terms_by_termid":{"MONDO:0014394":null},"xrefs":{"Monarch":{"xref_id":"0014394"}}}


id: MONDO:0017960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CANDLE syndrome (obsolete MONDO:0017960)","termid":"MONDO:0017960","xrefs":{"Monarch":{"xref_id":"0017960"}}}


id: PBO:0060543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 3","termid":"PBO:0060543"}


id: MONDO:0002648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm in which there is infiltration of the skin overlying the breast by neoplastic large cells with abundant pale cytoplasm and large nuclei with prominent nucleoli (Paget cells). It is almost always associated with an intraductal or invasive ductal carcinoma of the breast. The clinical features include focal skin reddening, and eczema. Retraction of the nipple may sometimes occur.","definition_xrefs":["NCIT:C47857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"Paget disease","termid":"MONDO:0021165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mammary Paget disease","secondary_identifiers":["MEDGEN:18263","DOID:3443","UMLS:C0030185","ICDO:8540/3","MESH:D010144"],"synonyms":[{"name":"Paget cell neoplasm","type":"exact"},{"name":"Paget disease of the breast","type":"exact"},{"name":"Paget's disease of breast","type":"exact"},{"name":"Paget's disease of the breast","type":"exact"},{"name":"breast Paget disease","type":"exact"},{"name":"mammary Paget disease","type":"exact"},{"name":"mammary Paget's disease","type":"exact"}],"termid":"MONDO:0002648","xrefs":{"Monarch":{"xref_id":"0002648"}}}


id: PBO:0075269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 22","termid":"PBO:0075269"}


id: PBO:0056006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5","termid":"PBO:0056006"}


id: MONDO:0010049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-glaucoma-intellectual disability syndrome is characterized by progressive spastic paraplegia, glaucoma and intellectual deficit. It has been described in two families. The second described sibship was born to consanguineous parents. The mode of inheritance is autosomal recessive.","definition_xrefs":["Orphanet:2818"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia-glaucoma-intellectual disability syndrome","secondary_identifiers":["MESH:C564809","MEDGEN:376520","OMIM:270850","UMLS:C1849113","GARD:4931"],"synonyms":[{"name":"spastic paresis glaucoma intellectual disability","type":"related"},{"name":"spastic paresis glaucoma mental retardation","type":"related"},{"name":"spastic paresis, glaucoma, and intellectual disability","type":"related"},{"name":"spastic paresis, glaucoma, and mental retardation","type":"related"}],"termid":"MONDO:0010049","xrefs":{"Monarch":{"xref_id":"0010049"}}}


id: FYPO:0003181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I does not occur.","definition_xrefs":["PomBase:mah","GO:0042138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished meiotic DNA double-strand break formation","synonyms":[{"name":"absent meiotic DNA double-strand break formation","type":"exact"},{"name":"meiotic DNA double-strand break formation abolished","type":"exact"}],"termid":"FYPO:0003181"}


id: PR:Q874R4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q874R4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C947.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.04","synonyms":[{"name":"Spom972h-pfl3","type":"exact"}],"termid":"PR:Q874R4"}


id: GO:0036313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the catalytic subunit of a phosphatidylinositol 3-kinase. The catalytic subunit catalyzes the addition of a phosphate group to an inositol lipid at the 3' position of the inositol ring.","definition_xrefs":["GOC:bf","PMID:17475214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase binding","termid":"GO:0019900"},{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase binding","termid":"GO:0043548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase catalytic subunit binding","synonyms":[{"name":"PI3K catalytic subunit binding","type":"exact"},{"name":"p110 binding","type":"related"}],"termid":"GO:0036313"}


id: PBO:0111772
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR domain","termid":"PBO:0111772"}


id: PBO:0090343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2B (calcineurin B) regulatory subunit","termid":"PBO:0090343"}


id: PBO:0086300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in translation; forms a complex with Gir2p; has similarity to mammalian developmentally regulated GTP-binding protein","termid":"PBO:0086300"}


id: PBO:0039444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKHD1 divergent transcript","termid":"PBO:0039444"}


id: GO:0018165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uridylylation of peptidyl-tyrosine to form peptidyl-O4'-(phospho-5'-uridine)-L-tyrosine, found in glutamine synthetase.","definition_xrefs":["RESID:AA0256"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tyrosine uridylylation (obsolete GO:0018165)","termid":"GO:0018165"}


id: PBO:0067818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 120","termid":"PBO:0067818"}


id: GO:1903337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vacuolar transport.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"positively_regulates","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of vacuolar transport","synonyms":[{"name":"activation of vacuolar transport","type":"narrow"},{"name":"up regulation of vacuolar transport","type":"exact"},{"name":"up-regulation of vacuolar transport","type":"exact"},{"name":"upregulation of vacuolar transport","type":"exact"}],"termid":"GO:1903337"}


id: MONDO:0018620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothalamic adipsic hypernatraemia syndrome","secondary_identifiers":["GARD:21850","UMLS:C5681196","NANDO:2200325","MEDGEN:1814472","Orphanet:443101"],"termid":"MONDO:0018620","xrefs":{"Monarch":{"xref_id":"0018620"}}}


id: GO:0051592
data:
  {"annotated_genes":["SJAG_02858","SJAG_03631","SJAG_03799","SJAG_03879","SJAG_01233","SJAG_04454"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102904,115349,116677,118130,100002,112134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071277"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01233":null,"SJAG_02858":null,"SJAG_03631":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to calcium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to Ca2+ ion","type":"exact"}],"termid":"GO:0051592","terms_by_termid":{"GO:0071277":null}}


id: PR:Q10482
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysosomal amino acid transporter 1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.10","secondary_identifiers":["UniProtKB:Q10482"],"synonyms":[{"name":"Spom972h-PQLC2","type":"exact"}],"termid":"PR:Q10482"}


id: PBO:0028616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U2_snRNP_binding","termid":"PBO:0028616"}


id: GO:1900207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pronephric nephron tubule development.","definition_xrefs":["GOC:bf","PMID:9758706","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of pronephric nephron tubule development","termid":"GO:1900206"},{"relation_name":"negatively_regulates","term_name":"pronephric nephron tubule development","termid":"GO:0039020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pronephric nephron tubule development","synonyms":[{"name":"down regulation of pronephric nephron tubule development","type":"exact"},{"name":"down-regulation of pronephric nephron tubule development","type":"exact"},{"name":"downregulation of pronephric nephron tubule development","type":"exact"},{"name":"inhibition of pronephric nephron tubule development","type":"narrow"}],"termid":"GO:1900207"}


id: GO:0005619
data:
  {"annotated_genes":["SJAG_04771","SJAG_03057","SJAG_01321","SJAG_03483","SJAG_02916","SJAG_04236","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92088,111036,116076,116370,119799],"is_not":false,"summary":null,"term":"GO:0005619"},{"annotations":[93626],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[89338],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"}]},"cv_name":"cellular_component","definition":"The specialized cell wall of the ascospore (spore), which is the product of meiotic division. Examples of this component are found in Fungi.","definition_xrefs":["GOC:vw","ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall","termid":"GO:0009277"},{"relation_name":"is_a","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01321":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_04236":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"ascospore wall","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type spore wall","type":"broad"}],"termid":"GO:0005619","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null}}


id: _global:quality_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"characteristic_of","termid":"_global:characteristic_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality_of","secondary_identifiers":["RO:0000080"],"termid":"_global:quality_of"}


id: GO:0001641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that is activated by trans-1-aminocyclopentane-1,3-dicarboxylic acid (t-ACPD) and inhibits adenylate cyclase activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase inhibiting G protein-coupled glutamate receptor activity","termid":"GO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"group II metabotropic glutamate receptor activity","termid":"GO:0001641"}


id: GO:1905819
data:
  {"annotated_genes":["SJAG_03327","SJAG_04699","SJAG_04126","SJAG_01082","SJAG_03126","SJAG_04999","SJAG_01837","SJAG_01297","SJAG_00460","SJAG_01679","SJAG_02451","SJAG_02336","SJAG_00883","SJAG_03353","SJAG_04884","SJAG_04259","SJAG_02169","SJAG_01330","SJAG_03681","SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101488,105816,117903,113944,116268,92569,109181,110213,115775],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[108263,116496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[118674,77162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[108265,117560,116499,101330,103714,111878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[100587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[105200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[96064],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[115780],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[118681],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[103254],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chromosome separation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bhm","PMID:21795393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chromosome segregation","termid":"GO:0051985"},{"relation_name":"is_a","term_name":"regulation of chromosome separation","termid":"GO:1905818"},{"relation_name":"negatively_regulates","term_name":"chromosome separation","termid":"GO:0051304"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chromosome separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of chromatid release","type":"related"},{"name":"down regulation of chromosome separation","type":"exact"},{"name":"down regulation of rDNA separation","type":"narrow"},{"name":"down-regulation of chromatid release","type":"related"},{"name":"down-regulation of chromosome separation","type":"exact"},{"name":"down-regulation of rDNA separation","type":"narrow"},{"name":"downregulation of chromatid release","type":"related"},{"name":"downregulation of chromosome separation","type":"exact"},{"name":"downregulation of rDNA separation","type":"narrow"},{"name":"inhibition of chromatid release","type":"related"},{"name":"inhibition of chromosome separation","type":"narrow"},{"name":"inhibition of rDNA separation","type":"narrow"},{"name":"negative regulation of chromatid release","type":"related"},{"name":"negative regulation of rDNA separation","type":"narrow"}],"termid":"GO:1905819","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0090267":null,"GO:0140499":null,"GO:1902103":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:2000816":null}}


id: PBO:0086738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; partial duplicate of RSC30/YHR056C, truncated remnant of segmental duplication","termid":"PBO:0086738"}


id: MOD:00380
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["RESID:AA0375","Unimod:424#D","PubMed:14725769","PubMed:12910261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin guanine dinucleotide","termid":"MOD:01167"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-aspartyl-molybdenum","type":"exact"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"},{"name":"nitrate reductase A aspartyl Mo-bisMGD cofactor","type":"exact"},{"name":"phosphoric acid 4-(2-amino-4-oxo-3,4,5,6,-tetrahydro-pteridin-6-yl)-2-hydroxy-3,4-dimercapto-but-3-en-yl ester guanylate ester","type":"exact"}],"termid":"MOD:00380"}


id: PBO:0049517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AC histone family pseudogene 2","termid":"PBO:0049517"}


id: MONDO:0014814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any advanced sleep phase syndrome in which the cause of the disease is a mutation in the PER3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"advanced sleep phase syndrome","termid":"MONDO:0015609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advanced sleep phase syndrome 3","secondary_identifiers":["OMIM:616882","UMLS:C4225169","MEDGEN:909447","GARD:16165","DOID:0110013"],"synonyms":[{"name":"FASPS3","type":"exact"},{"name":"PER3 advanced sleep phase syndrome","type":"exact"},{"name":"advanced sleep phase syndrome caused by mutation in PER3","type":"exact"},{"name":"advanced sleep phase syndrome type 3","type":"exact"},{"name":"advanced sleep phase syndrome, familial, 3","type":"exact"},{"name":"advanced sleep phase syndrome, familial, type 3","type":"exact"},{"name":"familial advanced sleep phase syndrome 3","type":"exact"}],"termid":"MONDO:0014814","xrefs":{"Monarch":{"xref_id":"0014814"}}}


id: PBO:0029034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_meiosis_I","termid":"PBO:0029034"}


id: PBO:0087243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine protein phosphatase involved in formation of FAR complex; inhibits mitophagy by dephosphorylating Atg32p; required for glycogen accumulation; interacts with Tap42p, which binds to and regulates other protein phosphatases","termid":"PBO:0087243"}


id: PBO:0005095
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses per1","termid":"PBO:0005095"}


id: PATO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflectivity quality inhering in a bearer by virtue of the bearer's reflecting lots of light.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflectivity","termid":"PATO:0001297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glistening","synonyms":[{"name":"glossy","type":"exact"},{"name":"shiny","type":"exact"}],"termid":"PATO:0001373"}


id: PBO:0059638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 4","termid":"PBO:0059638"}


id: MOD:00436
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylhexosamine group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylhexosaminylated residue","synonyms":[{"name":"HexNAc","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"}],"termid":"MOD:00436"}


id: PBO:0003529
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog Of Bin","termid":"PBO:0003529"}


id: PBO:0046655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"establishment of sister chromatid cohesion N-acetyltransferase 2","termid":"PBO:0046655"}


id: MONDO:0014858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the HIVEP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 43","secondary_identifiers":["DOID:0070073","OMIM:616977","UMLS:C4310771","GARD:13179","MEDGEN:934738","SCTID:765434008"],"synonyms":[{"name":"HIVEP2 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"HIVEP2-related intellectual disability","type":"related"},{"name":"MRD43","type":"exact"},{"name":"autosomal dominant intellectual disability 43","type":"exact"},{"name":"autosomal dominant intellectual disability-43","type":"related"},{"name":"autosomal dominant mental retardation 43","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 43","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in HIVEP2","type":"exact"},{"name":"intellectual disability, autosomal dominant 43","type":"exact"},{"name":"intellectual disability, autosomal dominant type 43","type":"exact"},{"name":"mental retardation, autosomal dominant 43","type":"exact"},{"name":"mental retardation, autosomal dominant type 43","type":"exact"}],"termid":"MONDO:0014858","xrefs":{"Monarch":{"xref_id":"0014858"}}}


id: PBO:0050066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLTF antisense RNA 1","termid":"PBO:0050066"}


id: GO:0042358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine diphosphate metabolic process","termid":"GO:0042357"},{"relation_name":"is_a","term_name":"thiamine-containing compound catabolic process","termid":"GO:0042725"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790","GO:0006766"],"is_obsolete":false,"name":"thiamine diphosphate catabolic process","synonyms":[{"name":"TPP catabolic process","type":"exact"},{"name":"TPP catabolism","type":"exact"},{"name":"thiamin diphosphate breakdown","type":"exact"},{"name":"thiamin diphosphate catabolic process","type":"exact"},{"name":"thiamin diphosphate catabolism","type":"exact"},{"name":"thiamin diphosphate degradation","type":"exact"},{"name":"thiamin pyrophosphate catabolic process","type":"exact"},{"name":"thiamin pyrophosphate catabolism","type":"exact"},{"name":"thiamine diphosphate catabolism","type":"exact"},{"name":"thiamine pyrophosphate catabolic process","type":"exact"},{"name":"thiamine pyrophosphate catabolism","type":"exact"}],"termid":"GO:0042358"}


id: GO:0021603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cranial nerves. This process pertains to the initial formation of a structure from unspecified parts. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial nerve formation","termid":"GO:0021603"}


id: FYPO:0001922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein dephosphorylation is normal (i.e. indistinguishable from wild type). Protein dephosphorylation is the removal of a phosphate group from a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0006470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein dephosphorylation during vegetative growth","synonyms":[{"name":"normal protein dephosphorylation during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide dephosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001922"}


id: MONDO:0002136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"noninfectious dermatoses of eyelid","termid":"MONDO:0002137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"eczematous dermatitis of eyelid","secondary_identifiers":["DOID:1893","SCTID:36259009","MEDGEN:509832","UMLS:C0155177","ICD9:373.31"],"termid":"MONDO:0002136","xrefs":{"Monarch":{"xref_id":"0002136"}}}


id: GO:0160174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular developmental process by which the outer layer of the cell (the cortex) rotates relative to the inner cytoplasm.","definition_xrefs":["PMID:22949618","PMID:37983969","PMID:25077289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cortical rotation","termid":"GO:0160174"}


id: MONDO:1012692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive hereditary neurodegenerative disorder that occurs in dogs and is characterized by neuronal degeneration and loss in the cerebellum, olivary nuclei, substantia nigra, and caudate nuclei due to a mutation in the SERAC1 gene.","definition_xrefs":["PMID:34490804","PMID:38003185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine multiple system degeneration, SERAC1-related, dog","secondary_identifiers":["OMIA:001468-9615"],"synonyms":[{"name":"CMSD","type":"exact"},{"name":"canine multiple system degeneration, dog","type":"related"}],"termid":"MONDO:1012692","xrefs":{"Monarch":{"xref_id":"1012692"}}}


id: PBO:0046312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer lncRNA neighbor of NEAT1 and MALAT1","termid":"PBO:0046312"}


id: PBO:0054715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2124","termid":"PBO:0054715"}


id: FYPO:0004144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of catalase activity is decreased during a cellular response to nitrosative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalase activity","termid":"FYPO:0003387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased catalase activity during cellular response to nitrosative stress","synonyms":[{"name":"decreased catalase activity during nitrosative stress","type":"exact"},{"name":"reduced catalase activity during cellular response to nitrosative stress","type":"exact"}],"termid":"FYPO:0004144"}


id: GO:0090519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism or cell protects itself from anoxia, which may also result in resistance to repeated exposure to anoxia.","definition_xrefs":["GOC:tb","PMID:19372430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to anoxia","termid":"GO:0034059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anoxia protection","termid":"GO:0090519"}


id: PBO:0017876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine aminotransferase Rhp1602 (predicted)","termid":"PBO:0017876"}


id: GO:0005652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane.","definition_xrefs":["ISBN:0198506732","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"},{"relation_name":"part_of","term_name":"nuclear periphery","termid":"GO:0034399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0034399"}],"interesting_parent_ids":["GO:0034399","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear lamina","secondary_identifiers":["Wikipedia:Nuclear_lamina","NIF_Subcellular:sao1455996588"],"termid":"GO:0005652"}


id: GO:0006600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving creatine (N-(aminoiminomethyl)-N-methylglycine), a compound synthesized from the amino acids arginine, glycine, and methionine that occurs in muscle.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"creatine metabolic process","secondary_identifiers":["Reactome:R-HSA-71288"],"synonyms":[{"name":"creatine metabolism","type":"exact"}],"termid":"GO:0006600"}


id: FYPO:0004450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to calcium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to calcium ion","synonyms":[{"name":"normal protein phosphorylation during cellular response to calcium","type":"exact"},{"name":"normal protein phosphorylation during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to calcium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0004450"}


id: PBO:0003575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap109","termid":"PBO:0003575"}


id: PBO:0014269
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital disorders of glycosylation","termid":"PBO:0014269"}


id: PBO:0049956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 2","termid":"PBO:0049956"}


id: PBO:0089052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase family V, transmembrane protein dislocase/calcium transporting ATPase Cta4","termid":"PBO:0089052"}


id: SO:0000210
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a transfer RNA (SO:0000253).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_primary_transcript","synonyms":[{"name":"tRNA primary transcript","type":"exact"}],"termid":"SO:0000210"}


id: PBO:0116972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRD1 antisense RNA 2","termid":"PBO:0116972"}


id: GO:1900006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendrite development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron projection development","termid":"GO:0010976"},{"relation_name":"is_a","term_name":"regulation of dendrite development","termid":"GO:0050773"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendrite development","synonyms":[{"name":"up regulation of dendrite development","type":"related"}],"termid":"GO:1900006"}


id: PR:Q9P7X7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-like protein 6A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.08","secondary_identifiers":["UniProtKB:Q9P7X7"],"synonyms":[{"name":"Spom972h-ACTL6A","type":"exact"},{"name":"actin-like protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"actin-like protein arp4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"altered polarity protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7X7"}


id: PBO:0063310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCGF3 antisense RNA 1","termid":"PBO:0063310"}


id: GO:0060657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of mammary gland cord elongation as a result of a signal being created by a mesenchymal cell that is a precursor to the mammary fat and its subsequent reception and interpretation by an mammary cord epithelial cell.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"mammary gland cord elongation","termid":"GO:0060654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of mammary gland cord elongation by mammary fat precursor cell-epithelial cell signaling","synonyms":[{"name":"regulation of mammary gland cord elongation by mammary fat precursor cell-epithelial cell signalling","type":"exact"}],"termid":"GO:0060657"}


id: PBO:0030284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sulfide","termid":"PBO:0030284"}


id: GO:0090123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The polysaccharide-based coating on the inner side of a lysosomal membrane. It may be involved in protecting the membrane from digestion by lysosomal enzymes.","definition_xrefs":["PMID:29367433","PMID:10521503","GOC:dph","GOC:ascb_2009","PMID:22809326","GOC:tb","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lysosomal glycocalyx","termid":"GO:0090123"}


id: PBO:0044935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-glutamate cyclase","termid":"PBO:0044935"}


id: PBO:0030212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_salt_stress","termid":"PBO:0030212"}


id: PBO:0069497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 764, pseudogene","termid":"PBO:0069497"}


id: PBO:0070059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 16, pseudogene","termid":"PBO:0070059"}


id: GO:0018941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving organomercury compound, any organic compound containing a mercury atom.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercury metabolic process (obsolete GO:0018941)","synonyms":[{"name":"organomercury metabolism","type":"exact"}],"termid":"GO:0018941"}


id: GO:0014880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle filament sliding, and consequently contributes to the regulation of the velocity of shortening of skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding","termid":"GO:0032971"},{"relation_name":"part_of","term_name":"regulation of the velocity of shortening of skeletal muscle modulating contraction","termid":"GO:0014729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of muscle filament sliding involved in regulation of the velocity of shortening in skeletal muscle contraction","termid":"GO:0014880"}


id: PBO:0075040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-3","termid":"PBO:0075040"}


id: PBO:0028277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_branched,_elongated,_multiseptate_vegetative_cell","termid":"PBO:0028277"}


id: PBO:0043800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis and planar polarity effector complex subunit 2","termid":"PBO:0043800"}


id: FYPO:0005257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-proline measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular proline level","synonyms":[{"name":"decreased cellular L-proline level","type":"exact"},{"name":"decreased cellular proline level during mitotic cell cycle","type":"related"},{"name":"decreased cellular proline level during vegetative growth","type":"exact"},{"name":"decreased level of proline in cell","type":"exact"},{"name":"reduced cellular proline level","type":"exact"},{"name":"reduced level of proline in cell","type":"exact"}],"termid":"FYPO:0005257"}


id: GO:0044217
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"other organism part","termid":"GO:0044217"}


id: MONDO:0010372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Clark-Baraitser syndrome (obsolete MONDO:0010372)","termid":"MONDO:0010372","xrefs":{"Monarch":{"xref_id":"0010372"}}}


id: PBO:0087218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold protein; assists in association of proteasome core particle with regulatory particle; inhibitor of proteasome in vivo and in vitro; inhibits proteasomal ATPase activity; degraded by the mature proteasome after assembly; contains HEAT-like repeats; protein increases in abundance and relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087218"}


id: PATO:0001135
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001135 ig d concentration (obsolete PATO:0001135)","termid":"PATO:0001135"}


id: PBO:0063011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein membrane anchor with glycosphingolipid microdomains 1","termid":"PBO:0063011"}


id: PBO:0043435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connector enhancer of kinase suppressor of Ras 1","termid":"PBO:0043435"}


id: PBO:0058941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix import factor 23","termid":"PBO:0058941"}


id: PBO:0084692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial dicarboxylate carrier; integral membrane protein, catalyzes a dicarboxylate-phosphate exchange across the inner mitochondrial membrane, transports cytoplasmic dicarboxylates into the mitochondrial matrix","termid":"PBO:0084692"}


id: FYPO:0004650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule in the mitotic spindle, occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule depolymerization during vegetative growth","termid":"FYPO:0005682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule depolymerization","synonyms":[{"name":"decreased mitotic spindle microtubule catastrophe","type":"related"},{"name":"decreased mitotic spindle microtubule depolymerisation","type":"exact"},{"name":"decreased mitotic spindle microtubule depolymerization during vegetative growth","type":"exact"},{"name":"decreased mitotic spindle microtubule shrinkage","type":"related"},{"name":"decreased spindle microtubule depolymerization during mitotic cell cycle","type":"exact"},{"name":"reduced mitotic spindle microtubule depolymerization","type":"exact"}],"termid":"FYPO:0004650"}


id: MONDO:0018239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aggrecan-related bone disorder (obsolete MONDO:0018239)","secondary_identifiers":["Orphanet:364817"],"termid":"MONDO:0018239","xrefs":{"Monarch":{"xref_id":"0018239"}}}


id: PBO:0040922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer associated ESR1 regulating natural antisense transcript 1","termid":"PBO:0040922"}


id: PBO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta subunit Gnr1","termid":"PBO:0005272"}


id: GO:1904112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of plus-end directed microfilament motor activity.","definition_xrefs":["GOC:kmv","GO_REF:0000059","GOC:TermGenie","PMID:25717181"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of plus-end directed microfilament motor activity (obsolete GO:1904112)","synonyms":[{"name":"activation of barbed-end directed actin-filament motor activity","type":"narrow"},{"name":"activation of plus-end directed actin filament motor activity","type":"related"},{"name":"activation of plus-end directed actin-filament motor activity","type":"narrow"},{"name":"activation of plus-end directed microfilament motor activity","type":"narrow"},{"name":"positive regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"positive regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"positive regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"up regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"up-regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"up-regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"up-regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up-regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"upregulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"upregulation of plus-end directed actin filament motor activity","type":"related"},{"name":"upregulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"upregulation of plus-end directed microfilament motor activity","type":"exact"}],"termid":"GO:1904112"}


id: MONDO:0010013
data:
  {"annotated_genes":["SJAG_00339"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88739],"is_not":false,"summary":null,"term":"MONDO:0010013"}]},"cv_name":"mondo","definition":"Schneckenbecken dysplasia (or chondrodysplasia with snail-like pelvis) is a prenatally lethal spondylodysplastic dysplasia.","definition_xrefs":["Orphanet:3144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"severe spondylodysplastic dysplasia","termid":"MONDO:0800080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005497","MONDO:0024322"],"is_obsolete":false,"name":"schneckenbecken dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:584032448","UMLS:C0432194","GARD:169","MESH:C536637","SCTID:254049009","ICD9:756.9","OMIM:269250","MEDGEN:98475","DOID:0050775"],"synonyms":[{"name":"SHNKND","type":"related"},{"name":"SLC35D1-CDG","type":"exact"},{"name":"chondrodysplasia lethal neonatal with snail like pelvis","type":"related"},{"name":"chondrodysplasia with snail-like pelvis","type":"exact"},{"name":"chondrodysplasia, lethal neonatal, with snail-like pelvis","type":"related"},{"name":"schneckenbecken dysplasia","type":"exact"}],"termid":"MONDO:0010013","terms_by_termid":{"MONDO:0010013":null},"xrefs":{"Monarch":{"xref_id":"0010013"}}}


id: PBO:0016081
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human U2AF2","termid":"PBO:0016081"}


id: PR:Q9Y876
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psh3 gene.","definition_xrefs":["UniProtKB:Q9Y876","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory component protein psh3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.20c","synonyms":[{"name":"Spom972h-psh3","type":"exact"}],"termid":"PR:Q9Y876"}


id: PBO:0049882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 1","termid":"PBO:0049882"}


id: PATO:0000929
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000929 light intensivity sensitivity (obsolete PATO:0000929)","termid":"PATO:0000929"}


id: GO:1900667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocrocin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"endocrocin biosynthetic process","termid":"GO:1900602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of endocrocin biosynthetic process","synonyms":[{"name":"regulation of endocrocin anabolism","type":"exact"},{"name":"regulation of endocrocin biosynthesis","type":"exact"},{"name":"regulation of endocrocin formation","type":"exact"},{"name":"regulation of endocrocin synthesis","type":"exact"}],"termid":"GO:1900667"}


id: GO:0043713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoisocaproate + NADH + H+ = (R)-2-hydroxyisocaproate + NAD+.","definition_xrefs":["PMID:16957230","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(R)-2-hydroxyisocaproate dehydrogenase activity","termid":"GO:0043713"}


id: GO:0046528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process following disc eversion whereby imaginal discs fuse with adjacent disc derivatives to form a continuous adult epidermis.","definition_xrefs":["PMID:11494317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc fusion","termid":"GO:0046528"}


id: PBO:0082060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase; multifunctional enzyme of the peroxisomal fatty acid beta-oxidation pathway; mutation is functionally complemented by human HSD17B4","termid":"PBO:0082060"}


id: PBO:0045985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHMT2 and SLC44A4 antisense RNA 1","termid":"PBO:0045985"}


id: PBO:0041176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 2 member A1","termid":"PBO:0041176"}


id: PBO:0052598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 5","termid":"PBO:0052598"}


id: GO:0070191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-methionine R-oxide + thioredoxin = L-methionine + thioredoxin disulfide; can act on free oxidized methionine with specificity for the R enantiomer; does not act on oxidized methionine in peptide linkage. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["PMID:19049972","GOC:mcc","PMID:17535911"],"gene_count":0,"genotype_count":0,"name":"obsolete methionine-R-sulfoxide reductase activity (obsolete GO:0070191)","termid":"GO:0070191"}


id: FYPO:0001215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of a protein complex at the cellular level is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal protein-containing complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein complex assembly during vegetative growth","synonyms":[{"name":"normal cellular protein complex assembly during vegetative growth","type":"exact"},{"name":"normal protein complex assembly during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001215"}


id: GO:0061972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bone which forms superficially in the organism are generated and organized.","definition_xrefs":["PMID:12588850","PMID:15003632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane bone morphogenesis","termid":"GO:0061973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermal bone morphogenesis","termid":"GO:0061972"}


id: GO:1903478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any actin filament bundle convergence that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","GOC:mtg_cell_cycle","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament bundle convergence involved in mitotic contractile ring assembly (obsolete GO:1903478)","synonyms":[{"name":"actin filament bundle convergence involved in actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"actin filament bundle convergence involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"actin filament bundle convergence involved in cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"actin filament bundle convergence involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903478"}


id: GO:0102740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: theobromine + S-adenosyl-L-methionine = H+ + caffeine + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete theobromine:S-adenosyl-L-methionine 1-N-methyltransferase activity (obsolete GO:0102740)","termid":"GO:0102740"}


id: PBO:0080644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 91","termid":"PBO:0080644"}


id: PBO:0066930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 232","termid":"PBO:0066930"}


id: PBO:0074175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 2","termid":"PBO:0074175"}


id: PBO:0044043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosome and spindle pole associated protein 1","termid":"PBO:0044043"}


id: PBO:0046187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 2","termid":"PBO:0046187"}


id: MONDO:0020732
data:
  {"annotated_genes":["SJAG_04934"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009910"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"progeroid syndrome","termid":"MONDO:0015333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"progeria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:176670","icd11.foundation:926151882","MESH:D011371"],"termid":"MONDO:0020732","terms_by_termid":{"MONDO:0009910":null},"xrefs":{"Monarch":{"xref_id":"0020732"}}}


id: PBO:0076395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adaptor 2B","termid":"PBO:0076395"}


id: GO:1903286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of potassium ion import.","definition_xrefs":["PMID:10636900","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"regulates","term_name":"potassium ion import across plasma membrane","termid":"GO:1990573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of potassium ion import","synonyms":[{"name":"regulation of potassium import","type":"exact"},{"name":"regulation of potassium ion uptake","type":"exact"}],"termid":"GO:1903286"}


id: PBO:0061947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily X member 5 pseudogene","termid":"PBO:0061947"}


id: PBO:0001611
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.9","termid":"PBO:0001611"}


id: PBO:0062127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 7 pseudogene","termid":"PBO:0062127"}


id: PBO:0068204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 511","termid":"PBO:0068204"}


id: MONDO:0021451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of brain","secondary_identifiers":["NCIT:C4781","SCTID:92030004","UMLS:C0496899","EFO:1000107","ICD9:225.0","MEDGEN:99225"],"synonyms":[{"name":"benign brain neoplasm","type":"exact"},{"name":"benign brain tumor","type":"exact"},{"name":"benign brain tumour","type":"exact"},{"name":"benign neoplasm of the brain","type":"exact"},{"name":"benign tumor of brain","type":"exact"},{"name":"benign tumor of the brain","type":"exact"},{"name":"benign tumour of brain","type":"exact"},{"name":"benign tumour of the brain","type":"exact"},{"name":"brain benign neoplasm","type":"exact"},{"name":"brain neoplasms, benign","type":"exact"}],"termid":"MONDO:0021451","xrefs":{"Monarch":{"xref_id":"0021451"}}}


id: PBO:0090609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S18","termid":"PBO:0090609"}


id: PBO:0001282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein","termid":"PBO:0001282"}


id: GO:0006520
data:
  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id: PBO:0034211
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id: MONDO:0957284
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"nemaline myopathy 5C, autosomal dominant","secondary_identifiers":["UMLS:C5830549","OMIM:620389","MEDGEN:1841185","DOID:0081375"],"termid":"MONDO:0957284","xrefs":{"Monarch":{"xref_id":"0957284"}}}


id: GO:0086045
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which AV node cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"AV node cell action potential","termid":"GO:0086016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during AV node cell action potential","synonyms":[{"name":"membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086045"}


id: PBO:0072155
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 32","termid":"PBO:0072155"}


id: PBO:0074011
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 2","termid":"PBO:0074011"}


id: PBO:0044573
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 zinc finger pseudogene 3","termid":"PBO:0044573"}


id: PBO:0071447
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 53","termid":"PBO:0071447"}


id: GO:0042376
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phylloquinone, vitamin K1, a quinone-derived compound synthesized by green plants.","definition_xrefs":["PMID:27337968","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phylloquinone metabolic process","termid":"GO:0042374"},{"relation_name":"is_a","term_name":"vitamin K catabolic process","termid":"GO:0042377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phylloquinone catabolic process","synonyms":[{"name":"phylloquinone breakdown","type":"exact"},{"name":"phylloquinone catabolism","type":"exact"},{"name":"phylloquinone degradation","type":"exact"},{"name":"phytomenadione catabolic process","type":"exact"},{"name":"phytomenadione catabolism","type":"exact"},{"name":"phytonadione catabolic process","type":"exact"},{"name":"phytonadione catabolism","type":"exact"},{"name":"phytylmenaquinone catabolic process","type":"exact"},{"name":"phytylmenaquinone catabolism","type":"exact"},{"name":"vitamin K1 catabolic process","type":"exact"},{"name":"vitamin K1 catabolism","type":"exact"}],"termid":"GO:0042376"}


id: PBO:0080372
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set pre-B cell surrogate light chain 1","termid":"PBO:0080372"}


id: GO:0008335
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the structural integrity of the ring canals connecting the female germline cyst.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"ovarian nurse cell to oocyte transport","termid":"GO:0007300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036","GO:0006810"],"is_obsolete":false,"name":"female germline ring canal stabilization","synonyms":[{"name":"nurse cell ring canal stabilization","type":"narrow"},{"name":"ovarian ring canal stabilization","type":"narrow"}],"termid":"GO:0008335"}


id: FYPO:0006194
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is spherical, and undergoes one or two rounds of cell division before all cells die, and some cells lyse.","definition_xrefs":["PomBase:mah","PMID:12456722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, abnormal cell shape","termid":"FYPO:0002421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, spherical cell with cell lysis","synonyms":[{"name":"inviable following spore germination, single or double cell division, spherical cell with cell lysis","type":"exact"},{"name":"inviable germinated spore, single or double cell division, spherical cell with cell lysis","type":"exact"},{"name":"lethal after spore germination, single or double cell division, spherical cell with cell lysis","type":"exact"}],"termid":"FYPO:0006194"}


id: MONDO:0030920
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 54","secondary_identifiers":["DOID:0080230","MEDGEN:1614787","GARD:16474","UMLS:C4540484","OMIM:617799"],"synonyms":[{"name":"MRD54","type":"related"},{"name":"autosomal dominant intellectual disability 54","type":"related"},{"name":"autosomal dominant mental retardation 54","type":"related"},{"name":"intellectual disability, autosomal dominant 54","type":"exact"},{"name":"mental retardation, autosomal dominant 54","type":"related"}],"termid":"MONDO:0030920","xrefs":{"Monarch":{"xref_id":"0030920"}}}


id: FYPO:0001419
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  {"alleles_by_uniquename":{"SJAG_03360:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03360","name":"shc1delta","uniquename":"SJAG_03360:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121299],"is_not":false,"summary":null,"term":"FYPO:0001419"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grows at the same rate as wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03360":null},"genotype_count":1,"genotypes_by_uniquename":{"shc1delta":{"display_name":"shc1delta","display_uniquename":"shc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03360:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal cell population growth rate","references_by_uniquename":{"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_03360"],"single_locus_genotype_uniquenames":["shc1delta"],"synonyms":[{"name":"normal cell population proliferation","type":"related"},{"name":"normal cell proliferation","type":"related"},{"name":"normal growth rate","type":"broad"}],"termid":"FYPO:0001419","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001419":null}}


id: GO:0051476
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phosphoenolpyruvate-dependent sugar phosphotransferase transport specific for mammosylglycerate.","definition_xrefs":["PMID:368051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate-dependent sugar phosphotransferase system","termid":"GO:0009401"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"phosphoenolpyruvate-dependent mannosylglycerate phosphotransferase system","synonyms":[{"name":"mannosylglycerate transport","type":"broad"}],"termid":"GO:0051476"}


id: PATO:0002265
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality of a process inhering in a bearer by virtue of the bearer's disposition to exhibit marked activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioural activity","termid":"PATO:0002265"}


id: MONDO:0060720
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation with defective fucosylation","secondary_identifiers":["OMIMPS:618005","UMLS:C4693905","MEDGEN:1647704"],"synonyms":[{"name":"CDGF","type":"related"},{"name":"congenital disorder of glycosylation with defective fucosylation","type":"exact"}],"termid":"MONDO:0060720","xrefs":{"Monarch":{"xref_id":"0060720"}}}


id: GO:0070607
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  {"annotated_genes":["SJAG_02278","SJAG_00424","SJAG_00610","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94287,96819,91282,104769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of (1->3)-alpha-glucan metabolic process","termid":"GO:0070605"},{"relation_name":"regulates","term_name":"cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070597"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell wall 1,3-alpha-glucan metabolic process","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"regulation of cell wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"regulation of cell wall alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070607","terms_by_termid":{"GO:0070610":null}}


id: PR:Q10272
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein crb3/ipi3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.08c","secondary_identifiers":["UniProtKB:Q10272"],"synonyms":[{"name":"Spom972h-WDR18","type":"exact"}],"termid":"PR:Q10272"}


id: GO:0009602
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id: GO:0051276
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id: MONDO:1012881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly that occurs in sheep due to a mutation in the MFSD2A gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly, sheep","termid":"MONDO:1010618"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, MFSD2A-related, sheep","secondary_identifiers":["OMIA:002371-9940"],"synonyms":[{"name":"congenital brain hypoplasia, sheep","type":"related"}],"termid":"MONDO:1012881","xrefs":{"Monarch":{"xref_id":"1012881"}}}


id: PBO:0003677
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CRE 5'-TGACGT-3'","termid":"PBO:0003677"}


id: PBO:0091715
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PSMC1","termid":"PBO:0091715"}


id: PBO:0031059
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_long_cells_(obsolete_FYPO:0000318)","termid":"PBO:0031059"}


id: GO:1902413
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  {"annotated_genes":["SJAG_04943","SJAG_03048","SJAG_00845","SJAG_01464","SJAG_02592","SJAG_01386","SJAG_02838","SJAG_04551","SJAG_01787","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94704,101568,104060,109047],"is_not":false,"summary":null,"term":"GO:1902413"},{"annotations":[92614,112741,96236,104284,105618,97734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[105619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[104289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cytokinesis.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis","termid":"GO:1902412"},{"relation_name":"negatively_regulates","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_04551":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cytokinesis after mitosis","type":"exact"},{"name":"down regulation of mitotic cytokinesis","type":"exact"},{"name":"down-regulation of cytokinesis after mitosis","type":"exact"},{"name":"down-regulation of mitotic cytokinesis","type":"exact"},{"name":"downregulation of cytokinesis after mitosis","type":"exact"},{"name":"downregulation of mitotic cytokinesis","type":"exact"},{"name":"inhibition of cytokinesis after mitosis","type":"narrow"},{"name":"inhibition of mitotic cytokinesis","type":"narrow"},{"name":"negative regulation of cytokinesis after mitosis","type":"exact"}],"termid":"GO:1902413","terms_by_termid":{"GO:1902413":null,"GO:1903472":null,"GO:1903500":null,"GO:1905757":null}}


id: GO:0016539
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  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68887],"is_not":false,"summary":null,"term":"GO:0016539"}]},"cv_name":"biological_process","definition":"The removal of an internal amino acid sequence (an intein) from a protein during protein maturation; the excision of inteins is precise and the N- and C-terminal exteins are joined by a normal peptide bond. Protein splicing involves 4 nucleophilic displacements by the 3 conserved splice junction residues.","definition_xrefs":["PMID:16305544","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein splicing","termid":"GO:0030908"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"intein-mediated protein splicing","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"intein","type":"related"}],"termid":"GO:0016539","terms_by_termid":{"GO:0016539":null}}


id: PBO:0091581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Yip11/Gem2","termid":"PBO:0091581"}


id: MONDO:0045050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract (disease) that involves the lens nucleus.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nuclear cataract","secondary_identifiers":["ICD9:366.04","HP:0100018","SCTID:53889007","icd11.foundation:2020818341","MEDGEN:140274","UMLS:C0392557","NCIT:C135176"],"synonyms":[{"name":"cataract (disease) of lens nucleus","type":"exact"},{"name":"lens nucleus cataract (disease)","type":"exact"}],"termid":"MONDO:0045050","xrefs":{"Monarch":{"xref_id":"0045050"}}}


id: MONDO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute interstitial pneumonia (obsolete MONDO:0002430)","termid":"MONDO:0002430","xrefs":{"Monarch":{"xref_id":"0002430"}}}


id: MONDO:0006485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant neoplasm arising from the uterine corpus and less often the cervix. It is characterized by the presence of two components: a malignant epithelial component and a sarcomatous component. In the uterine corpus the epithelial component is usually glandular whereas in the cervix is usually non-glandular. Carcinosarcoma of the cervix, although it is aggressive, it may have a better prognosis compared to the uterine corpus carcinosarcoma.","definition_xrefs":["NCIT:C42700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"},{"relation_name":"is_a","term_name":"carcinosarcoma","termid":"MONDO:0002928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine carcinosarcoma","secondary_identifiers":["MEDGEN:83678","ONCOTREE:UCS","SCTID:702369008","MESH:D012192","DOID:6171","UMLS:C0280630","EFO:1000613"],"synonyms":[{"name":"carcinosarcoma of the uterus","type":"exact"},{"name":"malignant mixed mesodermal (Mullerian) tumor of the uterus","type":"exact"},{"name":"malignant mixed mesodermal (Mullerian) tumour of the uterus","type":"exact"},{"name":"malignant mixed mesodermal (Müllerian) tumor of the uterus","type":"exact"},{"name":"malignant mixed mesodermal (Müllerian) tumour of the uterus","type":"exact"},{"name":"mixed mullerian sarcoma of uterus","type":"exact"},{"name":"uterine carcinosarcoma","type":"exact"},{"name":"uterine carcinosarcoma/uterine malignant mixed mullerian tumor","type":"related"},{"name":"uterine carcinosarcoma/uterine malignant mixed mullerian tumour","type":"related"},{"name":"uterine malignant mixed mesodermal (Mullerian) tumor","type":"exact"},{"name":"uterine malignant mixed mesodermal (Mullerian) tumour","type":"exact"},{"name":"uterine malignant mixed mesodermal (Müllerian) tumor","type":"exact"},{"name":"uterine malignant mixed mesodermal (Müllerian) tumour","type":"exact"},{"name":"uterus carcinosarcoma","type":"exact"}],"termid":"MONDO:0006485","xrefs":{"Monarch":{"xref_id":"0006485"}}}


id: PBO:0026871
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_methylation_at_telomere","termid":"PBO:0026871"}


id: PBO:0005063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a-a","termid":"PBO:0005063"}


id: PBO:0087567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of telomeric Ku complex (Yku70p-Yku80p); involved in telomere length maintenance, structure and telomere position effect; required for localization of telomerase ribonucleoprotein via interaction with TLC1 guide RNA; relocates to sites of double-strand cleavage to promote nonhomologous end joining during DSB repair; colocalizes with quiescent cell telomere hyperclusters","termid":"PBO:0087567"}


id: MOD:00228
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-diphytanylglycerol diether-L-cysteine.","definition_xrefs":["RESID:AA0223","PubMed:8195126","Unimod:410","PubMed:7797461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"S-diphytanylglycerol diether-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2,3-bis(3,7,11,15-tetramethylhexadecanyloxy)propyl]sulfanyl)propanoic acid","type":"exact"},{"name":"Archaeol","type":"related"},{"name":"LIPID S-archaeol cysteine","type":"exact"},{"name":"S-(diphytanylglyceryl)-L-cysteine","type":"exact"},{"name":"S-[2',3'-bis(phytanyloxy)propyl]cysteine","type":"exact"},{"name":"S-archaeol cysteine","type":"exact"},{"name":"S-diphytanylglycerol diether","type":"related"},{"name":"SPhyt2GlyceroCys","type":"exact"}],"termid":"MOD:00228"}


id: MONDO:0020389
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary valve agenesis","termid":"MONDO:0020064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary valve agenesis-ventricular septal defect-persistent ductus arteriosus syndrome","secondary_identifiers":["MEDGEN:1678560","GARD:19618","Orphanet:99048","UMLS:C5191313"],"synonyms":[{"name":"APV/PDA, non-Fallot type","type":"exact"},{"name":"PVA/PDA, non-Fallot type","type":"exact"},{"name":"absence of pulmonary valve-ventricular septal defect-persistent ductus arteriosus syndrome","type":"exact"},{"name":"pulmonary valve agenesis-intact ventricular septum-persistent ductus arteriosus syndrome","type":"related"}],"termid":"MONDO:0020389","xrefs":{"Monarch":{"xref_id":"0020389"}}}


id: PBO:0088167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40 repeat-containing subunit of Set3C histone deacetylase complex; complex represses early/middle sporulation genes; antagonizes telomeric silencing; binds specifically to the Sir4p N-terminus","termid":"PBO:0088167"}


id: FYPO:0005461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule-based movement is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule-based movement during vegetative growth","synonyms":[{"name":"abnormal microtubule-based movement during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005461"}


id: PBO:0004614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 implicated in trancription (predicted)","termid":"PBO:0004614"}


id: GO:0044093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.","definition_xrefs":["GO:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of molecular function","termid":"GO:0044093"}


id: PBO:0086831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function identified by gene-trapping; microarray-based expression analysis, and genome-wide homology searching; partially overlaps a Ty1 element","termid":"PBO:0086831"}


id: GO:0047464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (heparosan-N-sulfate)(n) = (heparan-N-sulfate)(n). Converts D-glucosyluronate residues to L-iduronate residues.","definition_xrefs":["EC:5.1.3.17","MetaCyc:5.1.3.17-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"heparosan-N-sulfate-glucuronate 5-epimerase activity","secondary_identifiers":["Reactome:R-HSA-2024100","RHEA:20197","Reactome:R-HSA-2076371"],"synonyms":[{"name":"C-5 uronosyl epimerase activity","type":"related"},{"name":"D-glucuronyl C-5 epimerase activity","type":"related"},{"name":"heparosan epimerase activity","type":"related"},{"name":"heparosan-N-sulfate-D-glucuronosyl 5-epimerase activity","type":"related"},{"name":"heparosan-N-sulphate-glucuronate 5-epimerase activity","type":"exact"},{"name":"poly[(1,4)-beta-D-glucuronosyl-(1,4)-N-sulfo-alpha-D-glucosaminyl] glucurono-5-epimerase activity","type":"related"},{"name":"polyglucuronate epimerase activity","type":"related"}],"termid":"GO:0047464"}


id: GO:1905897
data:
  {"annotated_genes":["SJAG_01528","SJAG_02244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79331,79854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to endoplasmic reticulum stress.","definition_xrefs":["GOC:aruk","GOC:TermGenie","GOC:bc","PMID:21803450","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01528":null,"SJAG_02244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to endoplasmic reticulum stress","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of ER stress response","type":"exact"},{"name":"regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"regulation of response to ER stress","type":"exact"}],"termid":"GO:1905897","terms_by_termid":{"GO:1904293":null}}


id: MONDO:1011907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, non-human animal","secondary_identifiers":["OMIA:000710"],"termid":"MONDO:1011907","xrefs":{"Monarch":{"xref_id":"1011907"}}}


id: PBO:0001106
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by carbon dioxide","termid":"PBO:0001106"}


id: MONDO:0004710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a uterus.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterus carcinoma in situ","secondary_identifiers":["MEDGEN:673127","SCTID:92788005","UMLS:C0686237","ICD9:233.2","DOID:9108"],"synonyms":[{"name":"carcinoma in situ of uterus","type":"exact"},{"name":"stage 0 uterus carcinoma","type":"exact"},{"name":"uterus in situ carcinoma","type":"exact"}],"termid":"MONDO:0004710","xrefs":{"Monarch":{"xref_id":"0004710"}}}


id: PBO:0060613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutral cholesterol ester hydrolase 1","termid":"PBO:0060613"}


id: FYPO:0007992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during metaphase.","definition_xrefs":["PomBase:mlr","PMID:35286199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0002822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during metaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during metaphase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during metaphase","type":"exact"}],"termid":"FYPO:0007992"}


id: GO:0033830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetylglucosamine + Skp1-protein-hydroxyproline = UDP + Skp1-protein-O-(N-acetyl-D-glucosaminyl)hydroxyproline.","definition_xrefs":["EC:2.4.1.229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"Skp1-protein-hydroxyproline N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:17841"],"synonyms":[{"name":"Skp1-HyPro GlcNAc-transferase activity","type":"related"},{"name":"UDP-GlcNAc:Skp1-hydroxyproline GlcNAc-transferase activity","type":"related"},{"name":"UDP-GlcNAc:hydroxyproline polypeptide GlcNAc-transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:Skp1-protein-hydroxyproline N-acetyl-D-glucosaminyl-transferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine (GlcNAc):hydroxyproline polypeptide GlcNAc-transferase activity","type":"related"}],"termid":"GO:0033830"}


id: PBO:0069607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 884, pseudogene","termid":"PBO:0069607"}


id: MONDO:0007071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenocortical hypofunction, chronic primary congenital","secondary_identifiers":["ICD9:255.41","OMIM:103230","GARD:15033","MEDGEN:78784","UMLS:C0271740","MESH:C562711","SCTID:12427005"],"synonyms":[{"name":"Addison disease, congenital","type":"related"},{"name":"adrenocortical hypofunction, chronic primary congenital","type":"exact"}],"termid":"MONDO:0007071","xrefs":{"Monarch":{"xref_id":"0007071"}}}


id: GO:0003177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pulmonary valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semi-lunar valve development","termid":"GO:1905314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary valve development","termid":"GO:0003177"}


id: SOFP:non_canonical_start_codon
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"The sequence of the biological start codon","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_canonical_start_codon","termid":"SOFP:non_canonical_start_codon"}


id: PBO:0111811
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I subfamily","termid":"PBO:0111811"}


id: PBO:0065681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase domain containing 1","termid":"PBO:0065681"}


id: PBO:0002765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT I complex subunit Vps28","termid":"PBO:0002765"}


id: GO:0062212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of firing from an early origin of replication involved in mitotic DNA replication.","definition_xrefs":["PMID:22279046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic DNA replication initiation","termid":"GO:1903466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"regulation of mitotic DNA replication initiation from early origin","synonyms":[{"name":"regulation of early replication origin firing","type":"exact"}],"termid":"GO:0062212"}


id: GO:0106156
data:
  {"annotated_genes":["SJAG_05265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96687],"is_not":false,"summary":null,"term":"GO:0106156"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-lysine + 2-oxoglutarate + O2 = protein 4-hydroxy-L-lysine + succinate + CO2.","definition_xrefs":["PMID:24486019","RHEA:57156","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"peptidyl-lysine 4-dioxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9629946"],"termid":"GO:0106156","terms_by_termid":{"GO:0106156":null}}


id: PBO:0069978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1273, pseudogene","termid":"PBO:0069978"}


id: GO:0031773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kisspeptin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"kisspeptin receptor binding","synonyms":[{"name":"G-protein coupled receptor 54 binding","type":"exact"},{"name":"KiSS-1 receptor binding","type":"exact"},{"name":"hOT7T175 receptor binding","type":"exact"},{"name":"hypogonadotropin-1 receptor binding","type":"exact"},{"name":"kisspeptin receptor ligand","type":"narrow"},{"name":"metastin receptor binding","type":"exact"}],"termid":"GO:0031773"}


id: GO:0050285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-sinapoylcholine + H2O = choline + H+ + sinapate.","definition_xrefs":["EC:3.1.1.49","RHEA:10016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"sinapine esterase activity","secondary_identifiers":["MetaCyc:SINAPINE-ESTERASE-RXN","KEGG_REACTION:R02381"],"synonyms":[{"name":"aromatic choline esterase activity","type":"related"},{"name":"sinapoylcholine sinapohydrolase activity","type":"related"}],"termid":"GO:0050285"}


id: SO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to an EST or cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_match","synonyms":[{"name":"expressed sequence match","type":"exact"}],"termid":"SO:0000102"}


id: GO:1900188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in single-species biofilm formation","termid":"GO:1900187"},{"relation_name":"negatively_regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"down regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"down-regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down-regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"downregulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"downregulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"inhibition of cell adhesion during single-species biofilm formation","type":"related"},{"name":"inhibition of cell adhesion involved in single-species biofilm formation","type":"narrow"},{"name":"negative regulation of cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:1900188"}


id: GO:0003358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a noradrenergic neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation","termid":"GO:0003357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron development","synonyms":[{"name":"norepinephrine secreting neuron development","type":"exact"}],"termid":"GO:0003358"}


id: SO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a kind of homology where divergence occurred after a duplication event.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homologous","termid":"SO:0000857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous","termid":"SO:0000859"}


id: GO:0060188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein desumoylation. Protein desumoylation is the process in which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein desumoylation","termid":"GO:0016926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein desumoylation","termid":"GO:0060188"}


id: FYPO:0000956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bismuth ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on bismuth","synonyms":[{"name":"normal cell population growth in presence of bismuth","type":"exact"},{"name":"normal cell population growth on bismuth","type":"exact"},{"name":"normal cellular response to bismuth","type":"related"},{"name":"normal growth on bismuth ions","type":"exact"},{"name":"normal vegetative cell population growth on bismuth","type":"exact"}],"termid":"FYPO:0000956"}


id: GO:1905055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any calcium:cation antiporter activity that is involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["PMID:22972962","GO_REF:0000061","GOC:TermGenie","PMID:23255722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"calcium:monoatomic cation antiporter activity involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium ion antiporter activity involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"calcium:cation antiporter activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"broad"}],"termid":"GO:1905055"}


id: PBO:0027167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_premeiotic_DNA_replication_initiation","termid":"PBO:0027167"}


id: MONDO:0011073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"transient neonatal diabetes mellitus","termid":"MONDO:0020525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005015","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"diabetes mellitus, transient neonatal, 1","secondary_identifiers":["MEDGEN:371317","GARD:1839","MESH:C563322","Orphanet:99886","SCTID:609579009","UMLS:C1832386","OMIM:601410"],"synonyms":[{"name":"Dmtn","type":"related"},{"name":"Tndm","type":"related"},{"name":"Tndm1","type":"related"},{"name":"diabetes mellitus, transient neonatal 1","type":"exact"},{"name":"diabetes mellitus, transient neonatal, 1","type":"exact"},{"name":"diabetes mellitus, transient neonatal, type 1","type":"exact"}],"termid":"MONDO:0011073","xrefs":{"Monarch":{"xref_id":"0011073"}}}


id: PBO:0003819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR42","termid":"PBO:0003819"}


id: PBO:0076878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX28 pseudogene 2","termid":"PBO:0076878"}


id: SO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements at -37 to -32 with respect to the TSS (+1). Consensus sequence is (G|C)(G|C)(G|A)CGCC. Binds TFIIB.","definition_xrefs":["PMID:16858867","PMID:12651739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BREu_motif","synonyms":[{"name":"B-recognition element","type":"exact"},{"name":"BRE motif","type":"exact"},{"name":"BREu","type":"related"},{"name":"BREu motif","type":"exact"},{"name":"TFIIB recognition element","type":"related"},{"name":"transcription factor B-recognition element","type":"exact"}],"termid":"SO:0000016"}


id: GO:0098751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a bone cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone cell development","termid":"GO:0098751"}


id: PBO:0058320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4693","termid":"PBO:0058320"}


id: GO:0039668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus or viral genetic material into a host cell which occurs through retraction of the virion-bound pilus, followed by entry of the viral genome into the host cell through the pilus basal pore. Filamentous bacteriophages absorb to the tip of the F-pili and can enter the bacterial cell in this way.","definition_xrefs":["GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus basal pore (obsolete GO:0039668)","synonyms":[{"name":"filamentous viral entry into host cell via pilus retraction","type":"narrow"}],"termid":"GO:0039668"}


id: PBO:0035974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_acetaldehyde","termid":"PBO:0035974"}


