# terms

id: PBO:0043518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centriolin","termid":"PBO:0043518"}


id: MONDO:0002699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic ductal carcinoma (obsolete MONDO:0002699)","termid":"MONDO:0002699","xrefs":{"Monarch":{"xref_id":"0002699"}}}


id: GO:0035894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of platelet aggregation in another organism.","definition_xrefs":["PMID:11453648","GOC:fj","GOC:bf","PMID:18804547"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of platelet aggregation in another organism (obsolete GO:0035894)","synonyms":[{"name":"positive regulation of platelet aggregation in another organism","type":"related"},{"name":"positive regulation of platelet aggregation in other organism","type":"exact"},{"name":"up-regulation of platelet aggregation in other organism","type":"related"},{"name":"upregulation of platelet aggregation in other organism","type":"exact"}],"termid":"GO:0035894"}


id: PBO:0028907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_cellular_response_to_calcium_ion","termid":"PBO:0028907"}


id: MOD:01303
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to an N4-hexosaminyl-L-asparagine.","definition_xrefs":["Unimod:454#N","PubMed:11467524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"hexosaminylated residue","termid":"MOD:00876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-hexosaminylated asparagine","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"}],"termid":"MOD:01303"}


id: PBO:0072157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 34","termid":"PBO:0072157"}


id: PBO:0026699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_arabinose_carbon_source","termid":"PBO:0026699"}


id: PBO:0036467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA branch migration helicase Irc3 (predicted)","termid":"PBO:0036467"}


id: GO:0008781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + N-acylneuraminate = diphosphate + CMP-N-acylneuraminate.","definition_xrefs":["EC:2.7.7.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acylneuraminate cytidylyltransferase activity","secondary_identifiers":["Reactome:R-HSA-4084982","MetaCyc:RXN-9990","RHEA:11344"],"synonyms":[{"name":"CMP-N-acetylneuraminate synthase activity","type":"related"},{"name":"CMP-N-acetylneuraminate synthetase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid synthase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid synthetase activity","type":"related"},{"name":"CMP-NANA synthetase activity","type":"related"},{"name":"CMP-Neu5Ac synthetase activity","type":"related"},{"name":"CMP-NeuAc synthetase activity","type":"related"},{"name":"CMP-NeuNAc synthetase activity","type":"related"},{"name":"CMP-sialate diphosphorylase activity","type":"related"},{"name":"CMP-sialate pyrophosphorylase activity","type":"related"},{"name":"CMP-sialate synthase activity","type":"related"},{"name":"CMP-sialate synthetase activity","type":"related"},{"name":"CMP-sialic acid synthetase activity","type":"related"},{"name":"CMP-sialic synthetase activity","type":"related"},{"name":"CTP:N-acylneuraminate cytidylyltransferase activity","type":"exact"},{"name":"acetylneuraminate cytidylyltransferase activity","type":"related"},{"name":"acylneuraminate cytidyltransferase activity","type":"related"},{"name":"cytidine 5'-monophospho-N-acetylneuraminic acid synthetase activity","type":"related"},{"name":"cytidine 5'-monophosphosialic acid synthetase activity","type":"related"},{"name":"cytidine 5-monophosphate N-acetylneuraminic acid synthetase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminic synthetase activity","type":"related"},{"name":"cytidine monophosphosialate pyrophosphorylase activity","type":"related"},{"name":"cytidine monophosphosialate synthetase activity","type":"related"},{"name":"cytidine monophosphosialic acid synthetase activity","type":"related"}],"termid":"GO:0008781"}


id: MONDO:0100046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing exfoliation syndrome.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exfoliation syndrome, susceptibility to","secondary_identifiers":["MEDGEN:864692","OMIM:177650","UMLS:C4016255"],"synonyms":[{"name":"pseudoexfoliation glaucoma","type":"related"},{"name":"pseudoexfoliation of the lens","type":"related"},{"name":"pseudoexfoliation syndrome","type":"related"}],"termid":"MONDO:0100046","xrefs":{"Monarch":{"xref_id":"0100046"}}}


id: MONDO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete muscular dystrophy (obsolete MONDO:0004912)","termid":"MONDO:0004912","xrefs":{"Monarch":{"xref_id":"0004912"}}}


id: PBO:0068163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 470","termid":"PBO:0068163"}


id: GO:0071927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of octopamine binding to a cell surface receptor.","definition_xrefs":["GOC:mah","PMID:15355245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octopamine or tyramine signaling pathway","termid":"GO:0007211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"octopamine signaling pathway","synonyms":[{"name":"octopamine signalling pathway","type":"exact"}],"termid":"GO:0071927"}


id: PBO:0069880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1168, pseudogene","termid":"PBO:0069880"}


id: PBO:0085994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for viability in rich media of cells lacking mitochondrial DNA; mutants have an invasive growth defect with elongated morphology; induced by amino acid starvation; ICY1 has a paralog, ATG41, that arose from the whole genome duplication","termid":"PBO:0085994"}


id: GO:0015156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of melibiose from one side of a membrane to the other. Melibiose is the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose and occurs as a constituent of the trisaccharide raffinose or in the exudates and nectaries of a number of plants.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"melibiose transmembrane transporter activity","termid":"GO:0015156"}


id: PBO:0086900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter of the MRP subfamily; adjacent ORFs YKR103W and YKR104W are merged in different strain backgrounds; MRP stands for multidrug resistance-associated protein","termid":"PBO:0086900"}


id: PBO:0027772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tingenone","termid":"PBO:0027772"}


id: GO:0102459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-dADP + H2O = 8-oxo-dAMP + hydrogenphosphate + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"8-oxo-dADP diphosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXN-14005"],"synonyms":[{"name":"8-oxo-deoxyadenine diphosphate phosphatase activity","type":"exact"}],"termid":"GO:0102459"}


id: FYPO:0005380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body duplication is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal spindle pole body organization","termid":"FYPO:0005378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic spindle pole body duplication","synonyms":[{"name":"normal mitotic SPB duplication","type":"exact"},{"name":"normal mitotic spindle pole body duplication during vegetative growth","type":"exact"},{"name":"normal spindle pole body duplication during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005380"}


id: PR:Q09827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec61 subunit gamma that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein Sec61 subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.02c","secondary_identifiers":["UniProtKB:Q09827"],"synonyms":[{"name":"Spom972h-SEC61G","type":"exact"}],"termid":"PR:Q09827"}


id: MONDO:0000342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with O'nyong-nyong virus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alphavirus infectious disease","termid":"MONDO:0005643"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O'nyong'nyong fever","secondary_identifiers":["MEDGEN:547234","SCTID:85579005","UMLS:C0276286","ICD10CM:A92.1","DOID:0050516"],"synonyms":[{"name":"O'nyong-nyong virus caused disease or disorder","type":"exact"},{"name":"O'nyong-nyong virus disease or disorder","type":"exact"},{"name":"O'nyong-nyong virus infectious disease","type":"exact"}],"termid":"MONDO:0000342","xrefs":{"Monarch":{"xref_id":"0000342"}}}


id: PBO:0003141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate N-acetyltransferase (predicted)","termid":"PBO:0003141"}


id: PATO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of cyan colour and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyan","termid":"PATO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated cyan","synonyms":[{"name":"bright cyan ","type":"related"}],"termid":"PATO:0001269"}


id: PATO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is less than 90 degrees.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute angle to","termid":"PATO:0001051"}


id: MONDO:0010717
data:
  {"annotated_genes":["SJAG_02006"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88274],"is_not":false,"summary":null,"term":"MONDO:0010717"}]},"cv_name":"mondo","definition":"Pyruvate dehydrogenase E1-alpha deficiency is the most frequent form of pyruvate dehydrogenase deficiency (PDHD) characterized by variable lactic acidosis, impaired psychomotor development, hypotonia and neurological dysfunction.","definition_xrefs":["Orphanet:79243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency","termid":"MONDO:0019169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0004069","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"pyruvate dehydrogenase E1-alpha deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564071","GARD:4620","MEDGEN:326486","ICD9:277.6","OMIM:312170","SCTID:124593001","UMLS:C1839413"],"synonyms":[{"name":"PDH deficiency","type":"related"},{"name":"PDHAD","type":"exact"},{"name":"ataxia with lactic acidosis 1","type":"related"},{"name":"ataxia, intermittent, with abnormal pyruvate metabolism","type":"related"},{"name":"ataxia, intermittent, with pyruvate dehydrogenase deficiency","type":"related"},{"name":"ataxia, intermittent, with pyruvate dehydrogenase, or decarboxylase, deficiency","type":"related"},{"name":"lactic acidemia, thiamine-responsive","type":"related"},{"name":"pyruvate decarboxylase deficiency","type":"broad"},{"name":"pyruvate dehydrogenase Complex deficiency","type":"related"},{"name":"pyruvate dehydrogenase E1-ALPHA deficiency","type":"related"},{"name":"pyruvate dehydrogenase E1-alpha deficiency","type":"exact"},{"name":"pyruvate dehydrogenase complex E1 component subunit alpha deficiency","type":"exact"},{"name":"pyruvate dehydrogenase e1-alpha deficiency, X-linked dominant","type":"exact"}],"termid":"MONDO:0010717","terms_by_termid":{"MONDO:0010717":null},"xrefs":{"Monarch":{"xref_id":"0010717"}}}


id: GO:0010667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death.","definition_xrefs":["GOC:mtg_apoptosis","GOC:tb","GOC:rl","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell apoptotic process","termid":"GO:0010664"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell apoptotic process","termid":"GO:0010665"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell apoptotic process","termid":"GO:0010659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell apoptotic process","synonyms":[{"name":"down regulation of cardiac muscle cell apoptosis","type":"exact"},{"name":"down-regulation of cardiac muscle cell apoptosis","type":"exact"},{"name":"downregulation of cardiac muscle cell apoptosis","type":"exact"},{"name":"inhibition of cardiac muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of cardiac muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010667"}


id: MONDO:0006077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hyperplasia that involves the adrenal medulla.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal medullary hyperplasia","secondary_identifiers":["UMLS:C1332177","MEDGEN:231356","NCIT:C35838","EFO:1000076"],"synonyms":[{"name":"adrenal medulla hyperplasia","type":"exact"}],"termid":"MONDO:0006077","xrefs":{"Monarch":{"xref_id":"0006077"}}}


id: PBO:0076244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 5","termid":"PBO:0076244"}


id: PBO:0070244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 185 pseudogene","termid":"PBO:0070244"}


id: PBO:0079111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 2 pseudogene 1","termid":"PBO:0079111"}


id: PBO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heavy metal ion homeostasis protein (predicted)","termid":"PBO:0002076"}


id: MONDO:0022825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cystic eye","secondary_identifiers":["UMLS:C0158543","Orphanet:519384","icd11.foundation:2061090928","MEDGEN:510582","GARD:10617"],"synonyms":[{"name":"CCE","type":"related"}],"termid":"MONDO:0022825","xrefs":{"Monarch":{"xref_id":"0022825"}}}


id: PR:Q09705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S24, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.15","synonyms":[{"name":"Spom972h-rsm24","type":"exact"}],"termid":"PR:Q09705"}


id: FYPO:0003182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister chromatids are not segregated equally to the two spindle poles in the second meiotic nuclear division.","definition_xrefs":["PMID:10440376","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal meiotic chromosome segregation","termid":"FYPO:0000925"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"sister chromatid nondisjunction at meiosis II","secondary_identifiers":["FYPO:0006416","FYPO:0003605"],"synonyms":[{"name":"abnormal chromosome disjunction during meiosis II","type":"exact"},{"name":"abnormal meiotic sister chromatid disjunction","type":"exact"},{"name":"abolished meiotic sister chromatid separation","type":"related"},{"name":"meiosis II nondisjunction","type":"related"},{"name":"nondisjunction at meiosis II","type":"exact"},{"name":"nondisjunction of sister chromatids in meiosis II","type":"exact"},{"name":"unequal meiotic chromosome segregation during meiosis II","type":"exact"},{"name":"unequal meiotic sister chromatid segregation in meiosis II","type":"exact"}],"termid":"FYPO:0003182"}


id: GO:0044751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a human chorionic gonadotropin stimulus.","definition_xrefs":["PMID:21325635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to human chorionic gonadotropin","termid":"GO:0044752"},{"relation_name":"is_a","term_name":"cellular response to gonadotropin stimulus","termid":"GO:0071371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to human chorionic gonadotropin stimulus","synonyms":[{"name":"cellular response to human chorionic gonadotrophin stimulus","type":"exact"}],"termid":"GO:0044751"}


id: GO:0047494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + CDP-ethanolamine = L-serine-phosphoethanolamine + CMP + H+.","definition_xrefs":["EC:2.7.8.4","RHEA:22656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016780","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"serine-phosphoethanolamine synthase activity","secondary_identifiers":["KEGG_REACTION:R02563","MetaCyc:SERINE-PHOSPHOETHANOLAMINE-SYNTHASE-RXN"],"synonyms":[{"name":"CDP-ethanolamine:L-serine ethanolamine phosphotransferase activity","type":"related"},{"name":"serine ethanolamine phosphate synthetase activity","type":"related"},{"name":"serine ethanolamine phosphodiester synthase activity","type":"related"},{"name":"serine ethanolaminephosphotransferase activity","type":"related"},{"name":"serine-phosphinico-ethanolamine synthase activity","type":"related"},{"name":"serinephosphoethanolamine synthase activity","type":"related"}],"termid":"GO:0047494"}


id: PBO:0005108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm3","termid":"PBO:0005108"}


id: MONDO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A marked difference between the individual's expressed/experienced gender and the gender others would assign him or her, and it must continue for at least six months. (from DSM-5)","definition_xrefs":["MESH:D000068116"],"gene_count":0,"genotype_count":0,"name":"obsolete gender dysphoria (obsolete MONDO:0001153)","secondary_identifiers":["DOID:10919","ICD9:302.50","Orphanet:459690","SCTID:93461009"],"synonyms":[{"name":"transsexualism","type":"related"}],"termid":"MONDO:0001153","xrefs":{"Monarch":{"xref_id":"0001153"}}}


id: GO:0043763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of UTP:glucose-1-phosphate uridylyltransferase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"UTP:glucose-1-phosphate uridylyltransferase regulator activity","synonyms":[{"name":"UDP-glucose diphosphorylase regulator activity","type":"exact"},{"name":"UDP-glucose pyrophosphorylase regulator activity","type":"exact"},{"name":"glucose-1-phosphate uridylyltransferase regulator activity","type":"exact"}],"termid":"GO:0043763"}


id: MONDO:0009392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperopia, high","secondary_identifiers":["MEDGEN:341009","MESH:C565497","OMIM:238950","UMLS:C1855925"],"synonyms":[{"name":"hyperopia, high","type":"exact"}],"termid":"MONDO:0009392","xrefs":{"Monarch":{"xref_id":"0009392"}}}


id: MONDO:0011102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the TECTA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 12","secondary_identifiers":["MESH:C563295","DOID:0110544","MEDGEN:321902","UMLS:C1832187","OMIM:601543","GARD:18107"],"synonyms":[{"name":"DFNA12","type":"narrow"},{"name":"DFNA8","type":"narrow"},{"name":"TECTA autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 12","type":"narrow"},{"name":"autosomal dominant deafness 8","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 12","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in TECTA","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 12","type":"narrow"},{"name":"autosomal dominant nonsyndromic hearing loss 12","type":"exact"},{"name":"deafness, autosomal dominant 12","type":"narrow"},{"name":"deafness, autosomal dominant 8","type":"narrow"},{"name":"deafness, autosomal dominant 8/12","type":"narrow"},{"name":"deafness, autosomal dominant type 12","type":"narrow"}],"termid":"MONDO:0011102","xrefs":{"Monarch":{"xref_id":"0011102"}}}


id: GO:1900130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lipid binding.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipid binding (obsolete GO:1900130)","termid":"GO:1900130"}


id: PBO:0070395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RORA antisense RNA 2","termid":"PBO:0070395"}


id: PBO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease Dhp1","termid":"PBO:0002013"}


id: GO:0033178
data:
  {"annotated_genes":["SJAG_01447","SJAG_00212","SJAG_01817","SJAG_04955","SJAG_04015","SJAG_01397","SJAG_00136","SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72976,98504,111842,120757,104588,61019,100810,89865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting two-sector ATPase complex and catalyzes ATP hydrolysis or synthesis. The catalytic domain (F1, V1, or A1) comprises a hexameric catalytic core and a central stalk, and is peripherally associated with the membrane when the two-sector ATPase is assembled.","definition_xrefs":["GOC:mah","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex, catalytic domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033178","terms_by_termid":{"GO:0000221":null}}


id: MONDO:0006657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apparent mineralocorticoid excess syndrome (obsolete MONDO:0006657)","secondary_identifiers":["NANDO:2100130","NANDO:2200362"],"termid":"MONDO:0006657","xrefs":{"Monarch":{"xref_id":"0006657"}}}


id: PBO:0073220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEMA6A antisense RNA 2","termid":"PBO:0073220"}


id: PBO:0087236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Separase/separin, a caspase-like cysteine protease; cleaves Mcd1p/Scc1p, a mitotic cohesin complex subunit, resulting in the dissociation of cohesin from chromatin and sister chromatid separation; cleaves meiotic-cohesin subunit Rec8p along chromosome arms in meiosis I and at centromeric sites during meiosis II; inhibits PP2A-Cdc55p to promote mitotic exit; inhibited by Pds1p (securin); relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087236"}


id: GO:0005750
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains about 10 polypeptide subunits including four redox centers: cytochrome b/b6, cytochrome c1 and an 2Fe-2S cluster. Catalyzes the oxidation of ubiquinol by oxidized cytochrome c1.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex III (obsolete GO:0005750)","synonyms":[{"name":"mitochondrial coenzyme Q-cytochrome c oxidoreductase complex","type":"exact"},{"name":"mitochondrial coenzyme Q-cytochrome c reductase complex","type":"exact"},{"name":"mitochondrial complex III","type":"exact"},{"name":"mitochondrial cytochrome bc(1) complex","type":"exact"},{"name":"mitochondrial cytochrome bc1 complex","type":"exact"},{"name":"mitochondrial electron transport complex III","type":"related"},{"name":"mitochondrial ubiquinol-cytochrome c oxidoreductase complex","type":"exact"},{"name":"mitochondrial ubiquinol-cytochrome-c reductase complex","type":"exact"}],"termid":"GO:0005750"}


id: GO:0042835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BRE RNA element (Bruno response element).","definition_xrefs":["PMID:10893231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"BRE binding","termid":"GO:0042835"}


id: GO:1901058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-hydroxyphenyl lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"p-hydroxyphenyl lignin metabolic process","synonyms":[{"name":"H-lignin metabolic process","type":"exact"},{"name":"p-hydroxyphenyl lignin metabolism","type":"exact"}],"termid":"GO:1901058"}


id: GO:0003251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of cell proliferation that contributes to the shaping of a heart valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in heart valve morphogenesis","termid":"GO:0003250"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000138"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in heart valve morphogenesis","termid":"GO:0003249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in heart valve morphogenesis","termid":"GO:0003251"}


id: PBO:0084978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; involved in detoxification of furfural; expression is up-regulated in the presence of furfural and 5-hydroxymethylfurfural, which are compounds generated during lignocellulosic biomass pre-treatment; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0084978"}


id: PBO:0050818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 3","termid":"PBO:0050818"}


id: GO:0019455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cystine reductase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process via cystine","termid":"GO:0019453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine, using cystine reductase","synonyms":[{"name":"L-cysteine breakdown via cystine, using cystine reductase","type":"exact"},{"name":"L-cysteine degradation via cystine, using cystine reductase","type":"exact"}],"termid":"GO:0019455"}


id: MONDO:0016190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of myofibrillar proteins","termid":"MONDO:0016186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of protein ZASP","secondary_identifiers":["UMLS:C5680840","GARD:20429","MEDGEN:1842575","Orphanet:209050"],"termid":"MONDO:0016190","xrefs":{"Monarch":{"xref_id":"0016190"}}}


id: GO:0032590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a dendrite.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"dendrite membrane","termid":"GO:0032590"}


id: PBO:0081045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C4H2-type containing","termid":"PBO:0081045"}


id: GO:0018447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: chloral hydrate = 3 H+ + 2 e- + trichloroacetate, and chloral hydrate + H2 = H2O + trichloroethanol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chloral hydrate dehydrogenase activity (obsolete GO:0018447)","termid":"GO:0018447"}


id: GO:1901457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to acetate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to acetate","termid":"GO:1901457"}


id: GO:0060482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lobar bronchus from an initial condition to its mature state. This process begins with the formation of the lobar bronchus and ends with the mature structure. The lobar bronchus is the major airway within the respiratory tree that starts by division of the principal bronchi on both sides and ends at the point of its own subdivision into tertiary or segmental bronchi.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchus development","termid":"GO:0060433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lobar bronchus development","termid":"GO:0060482"}


id: PBO:0029513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_stubby_vegetative_cell_population_(obsolete_FYPO:0002201)","termid":"PBO:0029513"}


id: PBO:0058751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6875","termid":"PBO:0058751"}


id: PBO:0027168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation","termid":"PBO:0027168"}


id: GO:0007390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The spreading of the amnioserosa from its compressed state to cover the whole of the dorsal surface. Initiating in the thorax and spreading posteriorly, it is accompanied by the transition from a parasegmental to segmental division of the embryo.","definition_xrefs":["GOC:bf","PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-band shortening","synonyms":[{"name":"germ-band retraction","type":"exact"}],"termid":"GO:0007390"}


id: PBO:0091096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Dhm2","termid":"PBO:0091096"}


id: PBO:0063199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pterin-4 alpha-carbinolamine dehydratase 1","termid":"PBO:0063199"}


id: PBO:0040755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BDNF antisense RNA","termid":"PBO:0040755"}


id: PBO:0040810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD cargo adaptor 1 pseudogene 1","termid":"PBO:0040810"}


id: GO:0034116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of heterotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of heterotypic cell-cell adhesion","termid":"GO:0034114"},{"relation_name":"positively_regulates","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of heterotypic cell-cell adhesion","termid":"GO:0034116"}


id: PBO:0088505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-3) methyltransferase Trm140","termid":"PBO:0088505"}


id: PBO:0091567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, LTR associated","termid":"PBO:0091567"}


id: PBO:0109459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Meu34, unknown biological role","termid":"PBO:0109459"}


id: GO:0070618
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Grb2 and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway.","definition_xrefs":["PMID:8940013","GOC:mah","PMID:7798267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Grb2-Sos complex","synonyms":[{"name":"Grb2-mSos1 complex","type":"narrow"}],"termid":"GO:0070618"}


id: PBO:0028671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Sad1_foci_during_response_to_DNA_damage","termid":"PBO:0028671"}


id: MONDO:0011219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Fried's tooth and nail syndrome","secondary_identifiers":["MEDGEN:764338","GARD:16903","DOID:0111661","Orphanet:99672","UMLS:C3551424","OMIM:602401","SCTID:239020008"],"synonyms":[{"name":"ECTD8","type":"related"},{"name":"ectodermal dysplasia 8, hair/tooth/nail type","type":"related"}],"termid":"MONDO:0011219","xrefs":{"Monarch":{"xref_id":"0011219"}}}


id: GO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell over time, from its formation to the mature structure. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"columnar/cuboidal epithelial cell development","termid":"GO:0002066"}


id: GO:0034681
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha11 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"integrin alpha11-beta1 complex","synonyms":[{"name":"ITGA11-ITGB1 complex","type":"narrow"},{"name":"alpha11-beta1 integrin complex","type":"exact"}],"termid":"GO:0034681"}


id: PBO:0113245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that binds the rDNA replication fork barrier site; required for replication fork blocking and recombinational hotspot activity that results in concerted evolution of the rDNA, termed homogenization; role in recruitment of condensin to the replication fork barrier (RFB), contributing to the faithful segregation of rDNA repeats; proposed role in recovery from low rDNA copy number; related to retroviral integrases","termid":"PBO:0113245"}


id: GO:0061043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"regulates","term_name":"vascular wound healing","termid":"GO:0061042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular wound healing","termid":"GO:0061043"}


id: MONDO:0010121
data:
  {"annotated_genes":["SJAG_01852"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88918],"is_not":false,"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","definition":"Thrombocytopenia-absent radius (TAR) syndrome is a very rare congenital malformation syndrome characterized by bilateral radial aplasia and thrombocytopenia.","definition_xrefs":["Orphanet:3320"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia-absent radius syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:61235","NANDO:2200661","ICD9:759.89","GARD:5116","SCTID:85589009","MedDRA:10071719","DECIPHER:64","DOID:14699","NORD:1768","MESH:C536940","NCIT:C99038","OMIM:274000","UMLS:C0175703"],"synonyms":[{"name":"1q21.1 susceptibility locus for Thrombocytopenia-Absent Radius (TAR) syndrome","type":"exact"},{"name":"TAR","type":"related"},{"name":"TAR syndrome","type":"exact"},{"name":"Tar syndrome","type":"related"},{"name":"Thrombocytopenia Absent Radius Syndrome","type":"exact"},{"name":"absent radii and thrombocytopenia","type":"related"},{"name":"chromosome 1Q21.1 deletion syndrome, 200-Kb","type":"related"},{"name":"radial aplasia-thrombocytopenia syndrome","type":"exact"},{"name":"thrombocytopenia absent radii","type":"related"},{"name":"thrombocytopenia absent radius syndrome","type":"related"},{"name":"thrombocytopenia with absent radii (TAR) syndrome","type":"exact"},{"name":"thrombocytopenia-absent radius syndrome","type":"exact"}],"termid":"MONDO:0010121","terms_by_termid":{"MONDO:0010121":null},"xrefs":{"Monarch":{"xref_id":"0010121"}}}


id: GO:0015836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lipid-linked peptidoglycans into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan transport","termid":"GO:0015835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lipid-linked peptidoglycan transport","synonyms":[{"name":"lipid-linked murein transport","type":"exact"}],"termid":"GO:0015836"}


id: MONDO:0009665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A late-onset form of multiple carboxylase deficiency, an inborn error of biotin metabolism that, if untreated, is characterized by seizures, breathing difficulties, hypotonia, skin rash, alopecia, hearing loss and delayed development.","definition_xrefs":["Orphanet:79241"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"multiple carboxylase deficiency","termid":"MONDO:0015454"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005244","MONDO:0037792"],"is_obsolete":false,"name":"biotinidase deficiency","secondary_identifiers":["ICD9:277.6","OMIM:253260","GARD:894","MEDGEN:66323","MedDRA:10071434","DOID:856","ICD10CM:D81.810","NCIT:C84598","NORD:857","SCTID:8808004","UMLS:C0220754","MESH:D028921","NANDO:1200822"],"synonyms":[{"name":"BTD deficiency","type":"exact"},{"name":"biotin deficiency","type":"related"},{"name":"biotinidase deficiency","type":"exact"},{"name":"deficiency of biotinidase","type":"exact"},{"name":"juvenile-onset multiple carboxylase deficiency","type":"exact"},{"name":"late-onset biotin-responsive multiple carboxylase deficiency","type":"related"},{"name":"late-onset multiple carboxylase deficiency","type":"exact"},{"name":"multiple carboxylase deficiency, juvenile-onset","type":"related"},{"name":"multiple carboxylase deficiency, late-onset","type":"related"}],"termid":"MONDO:0009665","xrefs":{"Monarch":{"xref_id":"0009665"}}}


id: MONDO:0019950
data:
  {"annotated_genes":["SJAG_00831","SJAG_04053","SJAG_04316","SJAG_03188","SJAG_01491","SJAG_02096","SJAG_02103","SJAG_05219","SJAG_01918","SJAG_00804"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[88499,88500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[87781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[87126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014023"},{"annotations":[87965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014896"},{"annotations":[86998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013049"},{"annotations":[88182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011246"},{"annotations":[87593,87594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009682"},{"annotations":[87687,87688,87686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[87774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[88493,88494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[87086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033556"},{"annotations":[88498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[87779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[88496,88497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"}]},"cv_name":"mondo","definition":"A muscular dystrophy that is characterized by diminished muscle tone (hypotonia), progressive muscle weakness and degeneration (atrophy), abnormally fixed joints, spinal rigidity, and delays in reaching motor milestones such as sitting or standing unassisted.","definition_xrefs":["DOID:0050557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00804":null,"SJAG_00831":null,"SJAG_01491":null,"SJAG_01918":null,"SJAG_02096":null,"SJAG_02103":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:97242","SCTID:240059009","UMLS:C0699743","icd11.foundation:396687076","MEDGEN:147063","GARD:9138","ICD9:359.0"],"synonyms":[{"name":"CMD","type":"exact"},{"name":"MDC","type":"exact"},{"name":"congenital MD","type":"related"}],"termid":"MONDO:0019950","terms_by_termid":{"MONDO:0009364":null,"MONDO:0009682":null,"MONDO:0011246":null,"MONDO:0012248":null,"MONDO:0013049":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0014023":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null,"MONDO:0014896":null,"MONDO:0033556":null},"xrefs":{"Monarch":{"xref_id":"0019950"}}}


id: GO:0033358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-L-arabinose, uridinediphosphoarabinose, a substance composed of arabinose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-L-arabinose metabolic process","termid":"GO:0033356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UDP-L-arabinose biosynthetic process","synonyms":[{"name":"UDP-L-arabinose anabolism","type":"exact"},{"name":"UDP-L-arabinose biosynthesis","type":"exact"},{"name":"UDP-L-arabinose formation","type":"exact"},{"name":"UDP-L-arabinose synthesis","type":"exact"}],"termid":"GO:0033358"}


id: PBO:0048946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 1","termid":"PBO:0048946"}


id: PBO:0073632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 17, pseudogene","termid":"PBO:0073632"}


id: MONDO:0100285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of infants in which there is progressive obliteration or discontinuity of the extrahepatic biliary system, resulting in obstruction of bile flow.","definition_xrefs":["OMIM:210500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary atresia","termid":"MONDO:0008867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic biliary atresia","secondary_identifiers":["GARD:886","MEDGEN:1621383","NCIT:C97069","UMLS:C4520983","icd11.foundation:1813934523"],"synonyms":[{"name":"EHBA","type":"exact"},{"name":"biliary atresia, extrahepatic","type":"exact"}],"termid":"MONDO:0100285","xrefs":{"Monarch":{"xref_id":"0100285"}}}


id: MONDO:0018457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic bone development disorder (obsolete MONDO:0018457)","secondary_identifiers":["Orphanet:404584"],"synonyms":[{"name":"rare genetic skeletal development disorder","type":"exact"}],"termid":"MONDO:0018457","xrefs":{"Monarch":{"xref_id":"0018457"}}}


id: PR:O13928
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.08","synonyms":[{"name":"Spom972h-rho3","type":"exact"}],"termid":"PR:O13928"}


id: PBO:0040270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATM interactor","termid":"PBO:0040270"}


id: FYPO:0006654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of G-quadruplex DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000653"],"is_obsolete":false,"name":"normal G-quadruplex DNA binding","synonyms":[{"name":"normal G-quartet DNA binding","type":"exact"},{"name":"normal G4 DNA binding","type":"exact"}],"termid":"FYPO:0006654"}


id: PR:O94324
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk31 gene.","definition_xrefs":["UniProtKB:O94324","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.06c","synonyms":[{"name":"Spom972h-ppk31","type":"exact"},{"name":"meiotically up-regulated gene 25 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94324"}


id: PBO:0113340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; well conserved across Saccharomyces species; added to genome annotation based on proteomic, translation, and evolutionary evidence","termid":"PBO:0113340"}


id: PBO:0053737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 960","termid":"PBO:0053737"}


id: GO:0021945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process that increases the extent of granule cell motility using intracellular calcium signaling mechanisms during radial migration.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:tb","PMID:15157725"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cerebellar granule cell migration by calcium (obsolete GO:0021945)","synonyms":[{"name":"calcium-mediated activation of granule cell migration","type":"narrow"},{"name":"calcium-mediated positive regulation of granule cell migration","type":"exact"},{"name":"calcium-mediated stimulation of granule cell migration","type":"narrow"},{"name":"calcium-mediated up regulation of granule cell migration","type":"exact"},{"name":"calcium-mediated up-regulation of granule cell migration","type":"exact"},{"name":"calcium-mediated upregulation of granule cell migration","type":"exact"}],"termid":"GO:0021945"}


id: MONDO:0012064
data:
  {"annotated_genes":["SJAG_04222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87450],"is_not":false,"summary":null,"term":"MONDO:0012064"}]},"cv_name":"mondo","definition":"Choanal atresia - deafness - cardiac defects - dysmorphism syndrome, also known as Burn-McKeown syndrome, is an extremely rare multiple congenital anomaly syndrome characterized by bilateral choanal atresia associated with a characteristic cranio-facial dysmorphism (hypertelorism with narrow palpebral fissures, coloboma of inferior eyelid with presence of eyelashes medial to the defect, prominent nasal bridge, thin lips, prominent ears), that can be accompanied by hearing loss, unilateral cleft lip, preauricular tags, cardiac septal defects and anomalies of the kidneys. The features of this syndrome overlaps considerably with those of the CHARGE syndrome.","definition_xrefs":["Orphanet:1200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04222":null},"genotype_count":0,"is_obsolete":false,"name":"choanal atresia-hearing loss-cardiac defects-craniofacial dysmorphism syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:608572","DOID:0080695","UMLS:C1837822","MESH:C563682","MEDGEN:325265","GARD:10041"],"synonyms":[{"name":"BMKS","type":"related"},{"name":"Burn-McKeown syndrome","type":"exact"},{"name":"bilateral choanal atresia, cardiac defects, deafness, and dysmorphic appearance","type":"related"},{"name":"choanal atresia deafness cardiac defects dysmorphism","type":"related"},{"name":"oculootofacial dysplasia","type":"exact"}],"termid":"MONDO:0012064","terms_by_termid":{"MONDO:0012064":null},"xrefs":{"Monarch":{"xref_id":"0012064"}}}


id: PBO:0075614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted phosphoprotein 2","termid":"PBO:0075614"}


id: GO:0018950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"o-xylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:oxy"],"synonyms":[{"name":"o-xylene metabolism","type":"exact"},{"name":"ortho-xylene metabolic process","type":"exact"},{"name":"ortho-xylene metabolism","type":"exact"}],"termid":"GO:0018950"}


id: PBO:0004698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf3","termid":"PBO:0004698"}


id: PBO:0058419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4788","termid":"PBO:0058419"}


id: GO:0048058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corneal lens in the compound eye over time, from its formation to the mature structure. The corneal lens is a chitinous extracellular secretion of the four underlying cone cells and the pigment cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"compound eye development","termid":"GO:0048749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye corneal lens development","termid":"GO:0048058"}


id: GO:0003207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a cardiac chamber from unspecified parts. A cardiac chamber is an enclosed cavity within the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber formation","synonyms":[{"name":"heart chamber formation","type":"exact"}],"termid":"GO:0003207"}


id: PBO:0067187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 248, pseudogene","termid":"PBO:0067187"}


id: GO:1901554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paracetamol stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to paracetamol","synonyms":[{"name":"response to acetaminophen","type":"exact"}],"termid":"GO:1901554"}


id: PBO:0073085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHA pseudogene 1","termid":"PBO:0073085"}


id: GO:0043664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host-derived membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host bacteroid-containing symbiosome","termid":"GO:0043663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host peribacteroid membrane","termid":"GO:0043664"}


id: PBO:0011136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein Far11","termid":"PBO:0011136"}


id: PBO:0039397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 2","termid":"PBO:0039397"}


id: PBO:0119988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCL2 upstream transcript","termid":"PBO:0119988"}


id: PBO:0046261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 1","termid":"PBO:0046261"}


id: MONDO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract (disease) that involves the lens cortex.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cortical cataract","secondary_identifiers":["icd11.foundation:1118806999","MEDGEN:82868","SCTID:193576003","UMLS:C0271160","ICD9:366.03","NCIT:C135177"],"synonyms":[{"name":"cataract (disease) of lens cortex","type":"exact"},{"name":"lens cortex cataract (disease)","type":"exact"}],"termid":"MONDO:0045051","xrefs":{"Monarch":{"xref_id":"0045051"}}}


id: MONDO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon usually benign neoplasm that arises from the testis. It is characterized by the presence of cysts lined by transitional cells and solid nests of transitional cells in a spindle cell stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"},{"relation_name":"is_a","term_name":"Brenner tumor","termid":"MONDO:0024235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular Brenner tumor","secondary_identifiers":["MEDGEN:273631","NCIT:C39953","UMLS:C1515281","DOID:4739"],"synonyms":[{"name":"testes, rudimentary Brenner tumor","type":"exact"},{"name":"testes, rudimentary Brenner tumour","type":"exact"},{"name":"testis Brenner tumor","type":"exact"},{"name":"testis Brenner tumour","type":"exact"}],"termid":"MONDO:0003118","xrefs":{"Monarch":{"xref_id":"0003118"}}}


id: PBO:0029965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029965"}


id: PBO:0002184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA","termid":"PBO:0002184"}


id: PBO:0041728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II gamma","termid":"PBO:0041728"}


id: MONDO:1010621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Omphalocele that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"omphalocele, non-human animal","termid":"MONDO:1010067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele, cattle","secondary_identifiers":["OMIA:000741-9913"],"termid":"MONDO:1010621","xrefs":{"Monarch":{"xref_id":"1010621"}}}


id: FYPO:0001684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to purvalanol A","synonyms":[{"name":"decreased RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"decreased RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"decreased transcript level during cellular response to purvalanol A","type":"exact"},{"name":"reduced RNA level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001684"}


id: GO:0047473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ATP-dependent activation of D-alanine and its transfer as a thiol ester to the phosphopantheinyl prosthetic group of a D-alanyl carrier protein, according to the reaction: ATP + D-alanine + a [D-alaninyl carrier protein] = a D-alanyl-[D-alanyl carrier protein] + AMP + diphosphate.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"D-alanine [D-alanyl carrier protein] ligase activity","synonyms":[{"name":"D-alanine-D-alanyl carrier protein ligase activity","type":"related"},{"name":"D-alanine-activating enzyme activity","type":"related"},{"name":"D-alanine-poly(phosphoribitol) ligase activity","type":"broad"},{"name":"D-alanine:poly(phosphoribitol) ligase (AMP-forming)","type":"broad"}],"termid":"GO:0047473"}


id: PBO:0071355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 14","termid":"PBO:0071355"}


id: PBO:0045832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 22","termid":"PBO:0045832"}


id: GO:1905762
data:
  {"annotated_genes":["SJAG_00686","SJAG_04682","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91543,106857,120142],"is_not":false,"summary":null,"term":"GO:1905762"}]},"cv_name":"molecular_function","definition":"Binding to a CCR4-NOT complex.","definition_xrefs":["GOC:TermGenie","PMID:26942678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_02622":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CCR4-NOT complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905762","terms_by_termid":{"GO:1905762":null}}


id: PBO:0060692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3","termid":"PBO:0060692"}


id: GO:0051153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle cell differentiation.","definition_xrefs":["CL:0000737","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"regulates","term_name":"striated muscle cell differentiation","termid":"GO:0051146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle cell differentiation","termid":"GO:0051153"}


id: MONDO:0020639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal abnormality consisting of the absence of one chromosome from the normal diploid number.","definition_xrefs":["NCIT:C3239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploidy","termid":"MONDO:0700064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosomy","secondary_identifiers":["MEDGEN:6432","UMLS:C0026499","MESH:D009006"],"termid":"MONDO:0020639","xrefs":{"Monarch":{"xref_id":"0020639"}}}


id: MONDO:0016691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pilocytic astrocytoma is a rare subtype of low-grade glioma of the central nervous system characterized by a well circumscribed, often cystic, brain tumor with a discrete mural nodule and long, hair-like projections that extend from the neoplastic astrocytes. Depending on the primary localization and the size of the tumor, patients can present with signs of raised intracranial pressure (headache, vomiting, papilledema), blurred vision, decreased visual acuity, ataxia and/or nystagmus, among others. It is most commonly located in the cerebellum, but occurrence in the hypothalamus, brain stem, optic chiasma, and hemispheres has also been reported.","definition_xrefs":["Orphanet:251612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low-grade astrocytoma","termid":"MONDO:0016685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pilocytic astrocytoma","secondary_identifiers":["UMLS:C0334583","ICDO:9421/1","GARD:9808","NCIT:C4047","ONCOTREE:PAST","MEDGEN:87271","DOID:4851","NANDO:2200084","SCTID:763865009"],"synonyms":[{"name":"Piloid astrocytoma","type":"exact"},{"name":"astrocytoma, benign","type":"exact"},{"name":"astrocytoma, pilocytic, benign","type":"exact"},{"name":"grade I astrocytic neoplasm","type":"exact"},{"name":"grade I astrocytic tumor","type":"exact"},{"name":"grade I astrocytic tumour","type":"exact"},{"name":"grade I astrocytoma","type":"exact"},{"name":"pilocytic astrocytoma","type":"exact"}],"termid":"MONDO:0016691","xrefs":{"Monarch":{"xref_id":"0016691"}}}


id: PR:O42832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00360","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent rRNA methyltransferase spb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.11","secondary_identifiers":["UniProtKB:O42832"],"synonyms":[{"name":"2'-O-ribose RNA methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosyl-L-methionine-dependent methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ3","type":"exact"}],"termid":"PR:O42832"}


id: PBO:0073886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 3","termid":"PBO:0073886"}


id: MONDO:0013001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete synesthesia (obsolete MONDO:0013001)","secondary_identifiers":["MESH:C562460","OMIM:612759"],"synonyms":[{"name":"Synsth","type":"related"},{"name":"synesthesia","type":"exact"}],"termid":"MONDO:0013001","xrefs":{"Monarch":{"xref_id":"0013001"}}}


id: FYPO:0003036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to ultraviolet light. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal transcription during cellular response to UV","synonyms":[{"name":"normal transcription during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal transcription during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0003036"}


id: GO:0062085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["PMID:21917918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of capsule polysaccharide biosynthetic process","termid":"GO:0062084"},{"relation_name":"is_a","term_name":"positive regulation of capsule organization","termid":"GO:1901915"},{"relation_name":"positively_regulates","term_name":"capsule polysaccharide biosynthetic process","termid":"GO:0045227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of capsule polysaccharide biosynthetic process","termid":"GO:0062085"}


id: PBO:0069984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1279, pseudogene","termid":"PBO:0069984"}


id: FYPO:0000882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000882"}


id: PBO:0088934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermembrane lipid transfer protein, chorein family Vps13a","termid":"PBO:0088934"}


id: PR:O74451
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pus3 gene.","definition_xrefs":["UniProtKB:O74451","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase C16C4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.06c","synonyms":[{"name":"Spom972h-pus3","type":"exact"}],"termid":"PR:O74451"}


id: GO:0120151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitotic actomyosin contractile ring disassembly.","definition_xrefs":["PMID:19109423"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitotic actomyosin contractile ring disassembly (obsolete GO:0120151)","termid":"GO:0120151"}


id: PR:O60074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- did2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein-sorting-associated protein 46 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.12","synonyms":[{"name":"Spom972h-did2","type":"exact"},{"name":"charged multivesicular body protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"doa4-independent degradation protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60074"}


id: GO:0061757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a leukocyte to an arterial endothelial cell via adhesion molecules.","definition_xrefs":["GOC:add","GOC:BHF","GOC:BHF_miRNA","GOC:bc","PMID:22267480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}


id: PBO:0016120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific polypeptide Pi","termid":"PBO:0016120"}


id: PBO:0089456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein Ent3","termid":"PBO:0089456"}


id: PBO:0053774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1019","termid":"PBO:0053774"}


id: FYPO:0000392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the metaphase/anaphase transition under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell cycle arrest at mitotic metaphase/anaphase transition (obsolete FYPO:0000392)","synonyms":[{"name":"abnormal cell cycle arrest at metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition with condensed chromosomes","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at metaphase/anaphase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase arrest","type":"exact"},{"name":"cell cycle passage through the metaphase-anaphase transition: arrested","type":"related"}],"termid":"FYPO:0000392"}


id: GO:0031010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any nuclear protein complex that contains an ATPase subunit of the imitation switch (ISWI) family. ISWI ATPases are involved in assembling chromatin and in sliding and spacing nucleosomes to regulate transcription of nuclear RNA polymerases I, II, and III and also DNA replication, recombination and repair.","definition_xrefs":["PMID:16568949","GOC:krc","PMID:15284901","GOC:mah","PMID:15020051","PMID:21810179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"ISWI-type complex","termid":"GO:0031010"}


id: PBO:0110072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing Dbl1, implicated in DNA repair","termid":"PBO:0110072"}


id: GO:2001160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K79 methylation.","definition_xrefs":["PMID:12876294"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K79 methylation (obsolete GO:2001160)","synonyms":[{"name":"regulation of histone H3 K79 methylation","type":"exact"},{"name":"regulation of histone H3K79me","type":"exact"},{"name":"regulation of histone lysine H3 K79 methylation","type":"exact"}],"termid":"GO:2001160"}


id: PBO:0049218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 2","termid":"PBO:0049218"}


id: PBO:0038821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 24, pseudogene","termid":"PBO:0038821"}


id: GO:0071056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM15.","definition_xrefs":["PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM15 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM15 complex","type":"narrow"}],"termid":"GO:0071056"}


id: PBO:0064654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRF interacting protein alpha 4","termid":"PBO:0064654"}


id: FYPO:0003852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing FR901464.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on FR901464","synonyms":[{"name":"normal cell population growth in presence of FR901464","type":"exact"},{"name":"normal cell population growth on FR901464","type":"exact"},{"name":"normal cellular response to FR901464","type":"related"},{"name":"normal vegetative cell population growth on FR901464","type":"exact"}],"termid":"FYPO:0003852"}


id: GO:0086049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the AV node cardiac muscle cell membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"AV node cell action potential","termid":"GO:0086016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during AV node cell action potential","synonyms":[{"name":"membrane repolarization involved in regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086049"}


id: GO:0055107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins from the Golgi to a secretory granule. The secretory granule is a membrane-bounded particle, usually protein, formed in the granular endoplasmic reticulum and the Golgi complex.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"Golgi to secretory granule transport","termid":"GO:0055107"}


id: GO:2001082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to inulin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"inulin binding","termid":"GO:2001082"}


id: PBO:0045584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 6","termid":"PBO:0045584"}


id: GO:0017136
data:
  {"annotated_genes":["SJAG_04186","SJAG_04039","SJAG_01075"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91898,79138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[106121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[91899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[116423,79139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[79140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-acetyl-L-lysyl-[histone] + NAD+ + H2O = L-lysyl-[protein] + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group from a histone to NAD, producing nicotinamide.","definition_xrefs":["PMID:28450737","PMID:24691964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"},{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacetylase activity","termid":"GO:0034979"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016746","GO:0019213","GO:0033558","GO:0016740","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone deacetylase activity","type":"exact"},{"name":"NAD-dependent histone lysine deacetylase activity","type":"exact"},{"name":"SIR2","type":"related"},{"name":"histone deacetylase activity","type":"broad"},{"name":"sirtuin","type":"narrow"}],"termid":"GO:0017136","terms_by_termid":{"GO:0032041":null,"GO:0046969":null,"GO:0046970":null,"GO:0140765":null,"GO:0141222":null}}


id: MONDO:1011666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-specific digestive disorder, non-human animal","secondary_identifiers":["OMIA:001768"],"termid":"MONDO:1011666","xrefs":{"Monarch":{"xref_id":"1011666"}}}


id: PBO:0069618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 895, pseudogene","termid":"PBO:0069618"}


id: MONDO:0011921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aural atresia, congenital","secondary_identifiers":["GARD:18275","MEDGEN:375051","UMLS:C1842937","MESH:C564321","OMIM:607842"],"synonyms":[{"name":"CAA","type":"related"},{"name":"aural atresia, congenital","type":"exact"},{"name":"aural atresia, congenital, with hyposmia","type":"related"}],"termid":"MONDO:0011921","xrefs":{"Monarch":{"xref_id":"0011921"}}}


id: MONDO:0026166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic immune deficiency with skin involvement (obsolete MONDO:0026166)","secondary_identifiers":["Orphanet:183494"],"termid":"MONDO:0026166","xrefs":{"Monarch":{"xref_id":"0026166"}}}


id: MONDO:0020346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete synaptic congenital myasthenic syndrome (obsolete MONDO:0020346)","secondary_identifiers":["Orphanet:98915"],"synonyms":[{"name":"synaptic congenital myasthenic syndromes","type":"related"}],"termid":"MONDO:0020346","xrefs":{"Monarch":{"xref_id":"0020346"}}}


id: PBO:0085951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is defective in unfolded protein response; possibly involved in a membrane regulation metabolic pathway; member of the PhzF superfamily, though most likely not involved in phenazine production","termid":"PBO:0085951"}


id: GO:0000009
data:
  {"annotated_genes":["SJAG_00816","SJAG_00437","SJAG_04770","SJAG_00295","SJAG_03056","SJAG_01276","SJAG_03555"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71815,73781,82247],"is_not":false,"summary":null,"term":"GO:0000009"},{"annotations":[61702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052917"},{"annotations":[61357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102704"},{"annotations":[89332,93078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033164"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannose residue to an oligosaccharide, forming an alpha-(1->6) linkage.","definition_xrefs":["GOC:mcc","PMID:2644248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_00437":null,"SJAG_00816":null,"SJAG_01276":null,"SJAG_03056":null,"SJAG_03555":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-1,6-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-449718"],"synonyms":[{"name":"1,6-alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0000009","terms_by_termid":{"GO:0000009":null,"GO:0033164":null,"GO:0052917":null,"GO:0102704":null}}


id: GO:1990476
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool that remain unreleased even after prolonged stimulation causes a saturating degree of vesicular turnover. 50-80% of the total number of synaptic vesicles at a resting terminal bouton are in this pool.","definition_xrefs":["GOC:pad","PMID:22745285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"synaptic vesicle, resting pool","synonyms":[{"name":"reserve pool of synaptic vesicles","type":"exact"},{"name":"resting pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990476"}


id: FYPO:0009062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to X-rays.","direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to ionizing radiation during vegetative growth","termid":"FYPO:0002312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to X-rays during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to X rays","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to X-rays","type":"exact"},{"name":"resistant to X rays during vegetative growth","type":"exact"},{"name":"resistant to X-rays during vegetative growth","type":"exact"}],"termid":"FYPO:0009062"}


id: PBO:0039619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANXA2R overlapping transcript 1","termid":"PBO:0039619"}


id: PBO:0070577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 43","termid":"PBO:0070577"}


id: MONDO:0035788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with anal stenosis (obsolete MONDO:0035788)","secondary_identifiers":["Orphanet:601008"],"termid":"MONDO:0035788","xrefs":{"Monarch":{"xref_id":"0035788"}}}


id: GO:1902846
data:
  {"annotated_genes":["SJAG_04597","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91845,96280],"is_not":false,"summary":null,"term":"GO:1902846"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic spindle elongation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid segregation","termid":"GO:0062033"},{"relation_name":"positively_regulates","term_name":"mitotic spindle elongation","termid":"GO:0000022"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic spindle elongation","type":"narrow"},{"name":"activation of spindle elongation during mitosis","type":"narrow"},{"name":"positive regulation of spindle elongation during mitosis","type":"exact"},{"name":"up regulation of mitotic spindle elongation","type":"exact"},{"name":"up regulation of spindle elongation during mitosis","type":"exact"},{"name":"up-regulation of mitotic spindle elongation","type":"exact"},{"name":"up-regulation of spindle elongation during mitosis","type":"exact"},{"name":"upregulation of mitotic spindle elongation","type":"exact"},{"name":"upregulation of spindle elongation during mitosis","type":"exact"}],"termid":"GO:1902846","terms_by_termid":{"GO:1902846":null}}


id: PBO:0056921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misshapen like kinase 1","termid":"PBO:0056921"}


id: PR:O74742
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A folylpolyglutamate synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11136:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.17","secondary_identifiers":["UniProtKB:O74742"],"synonyms":[{"name":"FPGS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1709.17","type":"related"},{"name":"Spom972h-FPGS","type":"exact"},{"name":"folylpoly-gamma-glutamate synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tetrahydrofolate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tetrahydrofolylpolyglutamate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74742"}


id: FYPO:0002825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle","synonyms":[{"name":"decreased protein localisation to mitotic spindle","type":"exact"},{"name":"decreased protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle during mitosis","type":"exact"},{"name":"decreased protein localization to spindle during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle","type":"exact"}],"termid":"FYPO:0002825"}


id: MONDO:1012127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency disease, llama","secondary_identifiers":["OMIA:000550-9844"],"termid":"MONDO:1012127","xrefs":{"Monarch":{"xref_id":"1012127"}}}


id: MONDO:1010687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in red fox.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, red fox","secondary_identifiers":["OMIA:000038-9627"],"termid":"MONDO:1010687","xrefs":{"Monarch":{"xref_id":"1010687"}}}


id: PR:P78812
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 6-phosphogluconate dehydrogenase, decarboxylating that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11811:SF19","PRO:DNx","OMA:SCHPO02372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconate dehydrogenase, decarboxylating (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.16","secondary_identifiers":["UniProtKB:P78812"],"synonyms":[{"name":"Spom972h-PGD","type":"exact"}],"termid":"PR:P78812"}


id: GO:0061738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The autophagy process by which cytosolic proteins targeted for degradation are tagged with a chaperone and are directly transferred into and degraded in a late endosomal compartment.","definition_xrefs":["GOC:pad","GOC:PARL","GOC:autophagy","GOC:dph","PMID:21238931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"late endosomal microautophagy","secondary_identifiers":["Reactome:R-HSA-9615710"],"termid":"GO:0061738"}


id: FYPO:0005828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"},{"relation_name":"is_a","term_name":"normal protein transport along microtubule during vegetative growth","termid":"FYPO:0005827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"normal protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"normal protein transport along microtubule to cell tip during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005828"}


id: GO:0015002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the four-electron reduction of dioxygen (O2) to water, coupled to generation of a proton electrochemical gradient across a membrane.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete heme-copper terminal oxidase activity (obsolete GO:0015002)","synonyms":[{"name":"haem-copper terminal oxidase activity","type":"exact"}],"termid":"GO:0015002"}


id: PBO:0075804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 3, pseudogene","termid":"PBO:0075804"}


id: MONDO:0015320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Pierre Robin syndrome associated with a chromosomal anomaly (obsolete MONDO:0015320)","termid":"MONDO:0015320","xrefs":{"Monarch":{"xref_id":"0015320"}}}


id: PR:P18869
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-isopropylmalate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03074","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.02c","secondary_identifiers":["UniProtKB:P18869"],"synonyms":[{"name":"3-IPM-DH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-leuB","type":"exact"},{"name":"beta-IPM dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P18869"}


id: MONDO:0012244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 5","secondary_identifiers":["UMLS:C1836436","GARD:15455","MESH:C563744","OMIM:609299","MEDGEN:373085"],"synonyms":[{"name":"HPC5","type":"related"},{"name":"prostate cancer, hereditary, 5","type":"exact"},{"name":"prostate cancer, hereditary, type 5","type":"exact"}],"termid":"MONDO:0012244","xrefs":{"Monarch":{"xref_id":"0012244"}}}


id: PBO:0049121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor associated sorting protein 1","termid":"PBO:0049121"}


id: MONDO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary myoglobinuria (obsolete MONDO:0000866)","secondary_identifiers":["MESH:D009212","DOID:0080108","NCIT:C114705","ICD10CM:R82.1"],"synonyms":[{"name":"myoglobinurias","type":"related"}],"termid":"MONDO:0000866","xrefs":{"Monarch":{"xref_id":"0000866"}}}


id: PBO:0049578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3-3A divergent transcript","termid":"PBO:0049578"}


id: PBO:0004681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor complex subunit Spt4","termid":"PBO:0004681"}


id: PATO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's receiving or being subjected to an action without responding or initiating an action in return.","definition_xrefs":["www.answers.com:www.answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"passive","termid":"PATO:0000764"}


id: GO:1904587
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95407,97589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycoprotein stimulus.","definition_xrefs":["GOC:TermGenie","PMID:14597422","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glycoprotein","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to glycoproteins","type":"exact"}],"termid":"GO:1904587","terms_by_termid":{"GO:0097466":null}}


id: PBO:0084782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial phenylalanyl-tRNA synthetase; active as a monomer, unlike the cytoplasmic subunit which is active as a dimer complexed to a beta subunit dimer; similar to the alpha subunit of E. coli phenylalanyl-tRNA synthetase","termid":"PBO:0084782"}


id: PBO:0050691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 18","termid":"PBO:0050691"}


id: GO:0016073
data:
  {"annotated_genes":["SJAG_00559","SJAG_02156","SJAG_03745","SJAG_01234","SJAG_04084","SJAG_00566","SJAG_04153","SJAG_00319","SJAG_02993","SJAG_00854","SJAG_00081","SJAG_01191","SJAG_04586","SJAG_00088","SJAG_04818","SJAG_00083","SJAG_04321","SJAG_03257","SJAG_04754","SJAG_03572","SJAG_01798","SJAG_04527","SJAG_01521","SJAG_01176","SJAG_04824","SJAG_04286","SJAG_01958","SJAG_03179","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72032,72377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"},{"annotations":[97073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120049"},{"annotations":[117451,105748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034472"},{"annotations":[118054,109994,92480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016180"},{"annotations":[79412,82110,59458,108174,108237,61119,64928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"},{"annotations":[73077,73380,74210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034473"},{"annotations":[104088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034474"},{"annotations":[74978,76097,78028,76851,73078,79473,73381,78479,74211,90214,75325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034475"},{"annotations":[91823,73079,73382,100840,74212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034476"},{"annotations":[81221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034477"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving snRNA, small nuclear RNA, any of various low-molecular-mass RNA molecules found in the eukaryotic nucleus as components of the small nuclear ribonucleoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00083":null,"SJAG_00088":null,"SJAG_00319":null,"SJAG_00559":null,"SJAG_00566":null,"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01234":null,"SJAG_01521":null,"SJAG_01798":null,"SJAG_01958":null,"SJAG_02156":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03257":null,"SJAG_03572":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04286":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04586":null,"SJAG_04754":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"snRNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"snRNA metabolism","type":"exact"}],"termid":"GO:0016073","terms_by_termid":{"GO:0016180":null,"GO:0031120":null,"GO:0034472":null,"GO:0034473":null,"GO:0034474":null,"GO:0034475":null,"GO:0034476":null,"GO:0034477":null,"GO:0071037":null,"GO:0120049":null}}


id: GO:0018471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-chlorobenzaldehyde + 2 H2O = 4-chlorobenzoate + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0447"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-chlorobenzaldehyde oxidase activity (obsolete GO:0018471)","termid":"GO:0018471"}


id: GO:0043662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The soluble material inside the peribacteroid membrane, but outside of the bacteroid, within a bacteroid-containing symbiosome.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacteroid-containing symbiosome","termid":"GO:0043660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"peribacteroid fluid","termid":"GO:0043662"}


id: GO:0106294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADPH + H+ + O2 = NADP + hydrogen peroxide (H2O2).","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH oxidase H202-forming activity (obsolete GO:0106294)","termid":"GO:0106294"}


id: PBO:0055271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2698","termid":"PBO:0055271"}


id: FYPO:0008405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum","termid":"FYPO:0006377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum","termid":"FYPO:0008405"}


id: PBO:0058846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8075","termid":"PBO:0058846"}


id: PBO:0059971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 16","termid":"PBO:0059971"}


id: PBO:0028318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitochondrial_fission_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028318"}


id: PBO:0056112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA2 pseudogene 3","termid":"PBO:0056112"}


id: MONDO:0009805
data:
  {"annotated_genes":["SJAG_02413"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88101],"is_not":false,"summary":null,"term":"MONDO:0009805"}]},"cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the PPIB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564921","OMIM:259440","UMLS:C1850169","DOID:0110349","GARD:10619","MEDGEN:376720"],"synonyms":[{"name":"OI 9","type":"related"},{"name":"OI type IX","type":"related"},{"name":"OI, type 9","type":"related"},{"name":"OI9","type":"exact"},{"name":"PPIB osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in PPIB","type":"exact"},{"name":"osteogenesis imperfecta sillence type II/III without abnormality of type I collagen","type":"related"},{"name":"osteogenesis imperfecta type 9","type":"exact"},{"name":"osteogenesis imperfecta type IX","type":"exact"},{"name":"osteogenesis imperfecta, type 9","type":"related"},{"name":"osteogenesis imperfecta, type IX","type":"related"}],"termid":"MONDO:0009805","terms_by_termid":{"MONDO:0009805":null},"xrefs":{"Monarch":{"xref_id":"0009805"}}}


id: MONDO:0014059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the TENM3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 9","secondary_identifiers":["GARD:15909","MEDGEN:767506","OMIM:615145","UMLS:C3554592"],"synonyms":[{"name":"MCOPCB9","type":"related"},{"name":"TENM3 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"microphthalmia, isolated, with coloboma 9","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in TENM3","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 9","type":"exact"},{"name":"microphthalmia, syndromic 15","type":"exact"}],"termid":"MONDO:0014059","xrefs":{"Monarch":{"xref_id":"0014059"}}}


id: PBO:0016893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase/ cyclin-dependent kinase activating kinase Csk1","termid":"PBO:0016893"}


id: PBO:0001363
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.32","termid":"PBO:0001363"}


id: MONDO:0019335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild hyperphenylalaninemia (HPA) is a rare form of phenylketonuria, an inborn error of amino acid metabolism, characterized by mild symptoms of HPA.","definition_xrefs":["Orphanet:79651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0004736"],"is_obsolete":false,"name":"mild hyperphenylalaninemia","secondary_identifiers":["UMLS:C5680207","GARD:19027","MEDGEN:1843033"],"synonyms":[{"name":"mHPA","type":"exact"},{"name":"mild HPA","type":"exact"},{"name":"non-PKU HPA","type":"exact"}],"termid":"MONDO:0019335","xrefs":{"Monarch":{"xref_id":"0019335"}}}


id: MONDO:0008587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tracheobronchopathia osteochondroplastica (TO) is an idiopathic and benign disease of the large airways characterized by submucosal osteocartilaginous nodules presenting in the trachea with or without the involvement of the major bronchi.","definition_xrefs":["Orphanet:3348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tracheobronchopathia osteochondroplastica","secondary_identifiers":["icd11.foundation:1797446244","UMLS:C3887588","MESH:C536977","OMIM:189961","GARD:5235","MEDGEN:854438","SCTID:54675009"],"synonyms":[{"name":"cartilaginous or bony projections into the tracheobronchial lumen","type":"related"},{"name":"tracheobronchopathia osteochondroplastica","type":"exact"},{"name":"tracheobronchopathia osteoplastica","type":"related"},{"name":"tracheopathia osteoplastica","type":"exact"}],"termid":"MONDO:0008587","xrefs":{"Monarch":{"xref_id":"0008587"}}}


id: PBO:0086907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative vacuolar membrane transporter for cationic amino acids; involved in vacuolar export of arginine under nitrogen starvation conditions; appears to be inactive under nitrogen replete conditions; may contribute to amino acid homeostasis; vacuolar membrane protein; member of the PQ-loop family, containing seven transmembrane domains; homologous to the human lysosomal cationic amino acid exporter PQLC2; null mutant is functionally complemented by the rat PQLC2 vacuolar transporter","termid":"PBO:0086907"}


id: PATO:0002199
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a substance by virtue of the ease with which the substance can be changed from a solid to a liquid state especially by the application of heat.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a substance","termid":"PATO:0002198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meltability","termid":"PATO:0002199"}


id: PBO:0061675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 62 C-terminal like","termid":"PBO:0061675"}


id: PBO:0116283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor, structural and functional homolog of human FAM192A; plays structural role in intermediate spliceosomal C* complex, which executes exon ligation; required for survival upon exposure to K1 killer toxin; proposed to regulate double-strand break repair via non-homologous end-joining","termid":"PBO:0116283"}


id: GO:0051289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein homooligomerization","termid":"GO:0051260"},{"relation_name":"is_a","term_name":"protein tetramerization","termid":"GO:0051262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"protein homotetramerization","synonyms":[{"name":"protein homotetramer assembly","type":"exact"},{"name":"protein homotetramer biosynthesis","type":"exact"},{"name":"protein homotetramer biosynthetic process","type":"exact"},{"name":"protein homotetramer formation","type":"exact"}],"termid":"GO:0051289"}


id: FYPO:0003736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the mitotic index is normal (i.e. indistinguishable from wild type). The mitotic index is the proportion of the population undergoing mitosis at any given time.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic index","termid":"FYPO:0003736"}


id: PBO:0066207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22","termid":"PBO:0066207"}


id: PBO:0000963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Cysteine","termid":"PBO:0000963"}


id: PBO:0042972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD1 helical C-terminal domain containing 1","termid":"PBO:0042972"}


id: PBO:0054066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1413","termid":"PBO:0054066"}


id: MONDO:0010221
data:
  {"annotated_genes":["SJAG_01416"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87011],"is_not":false,"summary":null,"term":"MONDO:0010221"}]},"cv_name":"mondo","definition":"CHIME syndrome is a rare ectodermal dysplasia syndrome characterized by ocular colobomas, cardiac defects, ichthyosiform dermatosis, intellectual disability, conductive hearing loss and epilepsy.","definition_xrefs":["Orphanet:3474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01416":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005066","MONDO:0005093","MONDO:0024322","MONDO:0002525"],"is_obsolete":false,"name":"CHIME syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:310","MESH:C536729","MEDGEN:341214","SCTID:720639008","UMLS:C1848392","DOID:0112152","OMIM:280000"],"synonyms":[{"name":"CHIME","type":"related"},{"name":"CHIME syndrome","type":"exact"},{"name":"PIGL-CDG","type":"exact"},{"name":"Zunich neuroectodermal syndrome","type":"related"},{"name":"Zunich-Kaye syndrome","type":"exact"},{"name":"coloboma, congenital heart disease, ichthyosiform dermatosis, intellectual disability, and ear anomalies syndrome","type":"related"},{"name":"coloboma, congenital heart disease, ichthyosiform dermatosis, mental retardation, and ear anomalies syndrome","type":"related"},{"name":"coloboma-congenital heart disease-ichthyosiform dermatosis-intellectual disability-ear anomalies syndrome","type":"exact"},{"name":"congenital disorder of glycosylation due to PIGL deficiency","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 5","type":"related"},{"name":"neuroectodermal dysplasia, CHIME type","type":"exact"},{"name":"neuroectodermal syndrome, Zunich type","type":"exact"}],"termid":"MONDO:0010221","terms_by_termid":{"MONDO:0010221":null},"xrefs":{"Monarch":{"xref_id":"0010221"}}}


id: PBO:0060575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 11","termid":"PBO:0060575"}


id: PBO:0062418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 55 pseudogene","termid":"PBO:0062418"}


id: PBO:0046156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 4","termid":"PBO:0046156"}


id: PBO:0089166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family Rio2","termid":"PBO:0089166"}


id: PR:O42847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 8A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01698","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C23A1.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.09","secondary_identifiers":["UniProtKB:O42847"],"synonyms":[{"name":"Spom972h-RBM8A","type":"exact"}],"termid":"PR:O42847"}


id: GO:0005354
data:
  {"annotated_genes":["SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112624],"is_not":false,"summary":null,"term":"GO:0005354"}]},"cv_name":"molecular_function","definition":"Enables the transfer of galactose from one side of a membrane to the other. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00057":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"galactose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"}],"termid":"GO:0005354","terms_by_termid":{"GO:0005354":null}}


id: PBO:0072681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and FYVE domain containing 2","termid":"PBO:0072681"}


id: FYPO:0004836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is decreased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein oxidation during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein oxidation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased protein oxidation during mitotic cell cycle","type":"related"},{"name":"reduced protein oxidation during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004836"}


id: MONDO:0018855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon form of keratosis pilaris in which there are scar-like follicular depressions and loss of hair.","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"keratosis pilaris","termid":"MONDO:0021036"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis pilaris atrophicans","secondary_identifiers":["ICD9:757.39","Orphanet:498","UMLS:C0263428","DOID:0080751","GARD:18694","icd11.foundation:273325594","MEDGEN:75520","MESH:C537412","SCTID:400059005","OMIM:604093"],"synonyms":[{"name":"Atrophodermia reticulata","type":"related"},{"name":"Atrophodermia reticulata symmetrica faciei","type":"related"},{"name":"Atrophodermia vermiculata","type":"related"},{"name":"KPA","type":"related"},{"name":"amelogenesis imperfecta, hypoplastic-hypomaturation, X-linked 2","type":"related"},{"name":"burnett Schwartz Berberian syndrome","type":"related"},{"name":"folliculitis ulerythematosa","type":"related"},{"name":"folliculitis ulerythematosa reticulata","type":"related"},{"name":"honeycomb atrophy","type":"related"},{"name":"keratosis pilaris","type":"related"},{"name":"keratosis pilaris atrophicans","type":"exact"},{"name":"keratosis pilaris atrophicans facies","type":"related"},{"name":"ulerythema ophryogenes","type":"related"},{"name":"ulerythema ophryogenes with multiple congenital anomalies","type":"related"},{"name":"ulerythema ophryogenesis","type":"related"}],"termid":"MONDO:0018855","xrefs":{"Monarch":{"xref_id":"0018855"}}}


id: GO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a single subunit mitochondrial RNA polymerase enzyme, which is composed of a single catalytic subunit similar to the RNA polymerase enzymes from phages T3, T7, and SP6.","definition_xrefs":["GOC:txnOH","PMID:20701995","PMID:2088182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-subunit type RNA polymerase binding","termid":"GO:0001050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"mitochondrial single-subunit type RNA polymerase binding","termid":"GO:0001001"}


id: PBO:0069789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1075, pseudogene","termid":"PBO:0069789"}


id: PBO:0031400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_segregation","termid":"PBO:0031400"}


id: PBO:0069235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 490, pseudogene","termid":"PBO:0069235"}


id: FYPO:0003271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-methionine as the sole sulfur source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002060","FYPO:0001985","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on methionine sulfur source","synonyms":[{"name":"decreased cell population growth on methionine sulphur source","type":"exact"},{"name":"decreased growth on methionine sulfur source","type":"broad"},{"name":"decreased methionine utilization","type":"related"},{"name":"decreased vegetative cell population growth on methionine sulfur source","type":"exact"},{"name":"reduced cell population growth on methionine sulfur source","type":"exact"}],"termid":"FYPO:0003271"}


id: MONDO:1010480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Supravalvular aortic stenosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supravalvular aortic stenosis, non-human animal","termid":"MONDO:1010020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supravalvular aortic stenosis, domestic cat","secondary_identifiers":["OMIA:000960-9685"],"termid":"MONDO:1010480","xrefs":{"Monarch":{"xref_id":"1010480"}}}


id: PBO:0027931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_heat","termid":"PBO:0027931"}


id: FYPO:0001053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis at the same size as wild type, and then septates to give rise to a cut phenotype. In a cut phenotype, a cell undergoes septation despite abnormal mitosis such that the septum physically divides the nucleus into two parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"has_part","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"},{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"is_a","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000032","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000337","FYPO:0000631","FYPO:0000004","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"cut, normal size cell","synonyms":[{"name":"cut following normal onset of mitosis, normal size cell","type":"exact"},{"name":"cut with mitotic catastrophe, normal size cell","type":"related"},{"name":"cut, normal size cell during mitotic cell cycle","type":"related"},{"name":"cut, normal size cell during vegetative growth","type":"exact"},{"name":"septation following abnormal nuclear division, normal size cell","type":"exact"}],"termid":"FYPO:0001053"}


id: GO:0038056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway by stopping, preventing or reducing the frequency, rate or extent of secretion of a member of the BMP family of proteins from the signaling cell.","definition_xrefs":["GOC:sart","GOC:bf","PMID:21750037"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of BMP signaling pathway by negative regulation of BMP secretion (obsolete GO:0038056)","synonyms":[{"name":"negative regulation of BMP signaling pathway by negative regulation of bone morphogenetic protein secretion","type":"exact"},{"name":"negative regulation of BMP signalling pathway by negative regulation of BMP secretion","type":"exact"}],"termid":"GO:0038056"}


id: PBO:0043116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIAO2A pseudogene 1","termid":"PBO:0043116"}


id: GO:2001005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of pectin catabolic process","termid":"GO:2001003"},{"relation_name":"positively_regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of pectin catabolic process","synonyms":[{"name":"positive regulation of pectin breakdown","type":"exact"},{"name":"positive regulation of pectin catabolism","type":"exact"},{"name":"positive regulation of pectin degradation","type":"exact"}],"termid":"GO:2001005"}


id: PBO:0065009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 13","termid":"PBO:0065009"}


id: PBO:0059306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L50 pseudogene 2","termid":"PBO:0059306"}


id: PBO:0113392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant shows improved incorporation efficiency of noncanonical amino acids in place of amber stop codon","termid":"PBO:0113392"}


id: PBO:0045337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 10","termid":"PBO:0045337"}


id: MONDO:0015954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic headache disorder (obsolete MONDO:0015954)","secondary_identifiers":["Orphanet:183509"],"synonyms":[{"name":"rare genetic headache","type":"exact"}],"termid":"MONDO:0015954","xrefs":{"Monarch":{"xref_id":"0015954"}}}


id: PBO:0031231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylation","termid":"PBO:0031231"}


id: MONDO:0007134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cooks syndrome is a malformation syndrome affecting the apical structures of digits and presenting with hypo/aplasia of nails and distal phalanges. More than half of digits are usually involved and the thumbs may appear digitalized.","definition_xrefs":["Orphanet:1487"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic nail anomaly (obsolete MONDO:0019285)","termid":"MONDO:0019285"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Cooks syndrome","secondary_identifiers":["GARD:4083","OMIM:106995","MEDGEN:354848","MESH:C537766","SCTID:720747002","UMLS:C1862841"],"synonyms":[{"name":"Cooks syndrome","type":"exact"},{"name":"ODP","type":"exact"},{"name":"anonychia and absence/hypoplasia of distal phalanges","type":"related"},{"name":"anonychia-onychodystrophy with hypoplasia or absence of distal phalanges","type":"related"},{"name":"anonychia-onychodystrophy with hypoplasia or absence of distal phalanges syndrome","type":"exact"}],"termid":"MONDO:0007134","xrefs":{"Monarch":{"xref_id":"0007134"}}}


id: PBO:0090167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor Eaf1","termid":"PBO:0090167"}


id: MOD:01415
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a monohydroxylated isoleucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated isoleucine","termid":"MOD:01414"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated isoleucine","synonyms":[{"name":"Hy1Ile","type":"exact"}],"termid":"MOD:01415"}


id: PBO:0052120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily D member 3","termid":"PBO:0052120"}


id: GO:0052482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of cell wall modification, in which the cell wall is reinforced and made thicker, that occurs as part of the defense response of an organism.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cell wall thickening","termid":"GO:0052386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"defense response by cell wall thickening","synonyms":[{"name":"cell wall thickening during defense response","type":"related"}],"termid":"GO:0052482"}


id: PBO:0113803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane stretch-activated calcium ion channel regulatory subunit Yam8","termid":"PBO:0113803"}


id: GO:1901221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac chamber morphogenesis.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber morphogenesis","termid":"GO:1901219"},{"relation_name":"positively_regulates","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac chamber morphogenesis","synonyms":[{"name":"activation of cardiac chamber morphogenesis","type":"narrow"},{"name":"activation of heart chamber morphogenesis","type":"narrow"},{"name":"positive regulation of heart chamber morphogenesis","type":"exact"},{"name":"up regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"up regulation of heart chamber morphogenesis","type":"exact"},{"name":"up-regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"up-regulation of heart chamber morphogenesis","type":"exact"},{"name":"upregulation of cardiac chamber morphogenesis","type":"exact"},{"name":"upregulation of heart chamber morphogenesis","type":"exact"}],"termid":"GO:1901221"}


id: GO:0050684
data:
  {"annotated_genes":["SJAG_01919","SJAG_03214","SJAG_04949","SJAG_03279","SJAG_01799","SJAG_01169","SJAG_02018","SJAG_01040","SJAG_01511","SJAG_04782","SJAG_02058","SJAG_04863","SJAG_05231","SJAG_00996"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77922],"is_not":false,"summary":null,"term":"GO:0050684"},{"annotations":[91319,120443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[75801,94020,77109,112905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[115057,107429,66146,113513,94753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000381"},{"annotations":[100462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905744"},{"annotations":[95607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA processing, those processes involved in the conversion of a primary mRNA transcript into a mature mRNA prior to its translation into polypeptide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00996":null,"SJAG_01040":null,"SJAG_01169":null,"SJAG_01511":null,"SJAG_01799":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_03214":null,"SJAG_03279":null,"SJAG_04782":null,"SJAG_04863":null,"SJAG_04949":null,"SJAG_05231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0050684","terms_by_termid":{"GO:0000381":null,"GO:0048024":null,"GO:0048026":null,"GO:0050684":null,"GO:1905744":null,"GO:1905746":null}}


id: MOD:01717
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino- or imino-hydrogen with a Proteome Sciences TMT6plex reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex reporter+balance reagent N-acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01717"}


id: PBO:0062750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily K member 2","termid":"PBO:0062750"}


id: GO:0021634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the optic nerve. This process pertains to the initial formation of a structure from unspecified parts. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","ISBN:0838580343","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"optic nerve morphogenesis","termid":"GO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve formation","synonyms":[{"name":"CN II biosynthesis","type":"related"},{"name":"CN II formation","type":"related"}],"termid":"GO:0021634"}


id: MONDO:0018319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"neuralgia","termid":"MONDO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"familial episodic pain syndrome","secondary_identifiers":["GARD:12684","OMIMPS:615040","DOID:0111728","Orphanet:391384","UMLS:C5190598","MEDGEN:1682682"],"synonyms":[{"name":"FEPS","type":"exact"}],"termid":"MONDO:0018319","xrefs":{"Monarch":{"xref_id":"0018319"}}}


id: PR:O14119
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A seipin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21212:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seipin homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.04","secondary_identifiers":["UniProtKB:O14119"],"synonyms":[{"name":"Spom972h-BSCL2","type":"exact"}],"termid":"PR:O14119"}


id: MONDO:0014518
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88558],"is_not":false,"summary":null,"term":"MONDO:0014518"}]},"cv_name":"mondo","definition":"Any isolated hereditary giant platelet disorder in which the cause of the disease is a mutation in the PRKACG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111048","GARD:17738","UMLS:C4015405","MEDGEN:863842","OMIM:616176","Orphanet:438207"],"synonyms":[{"name":"BDPLT19","type":"exact"},{"name":"PRKACG isolated hereditary giant platelet disorder","type":"exact"},{"name":"bleeding disorder, platelet-type, 19","type":"related"},{"name":"isolated hereditary giant platelet disorder caused by mutation in PRKACG","type":"exact"},{"name":"severe autosomal recessive macrothrombocytopenia","type":"exact"}],"termid":"MONDO:0014518","terms_by_termid":{"MONDO:0014518":null},"xrefs":{"Monarch":{"xref_id":"0014518"}}}


id: GO:0033631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits.","definition_xrefs":["GOC:add","PMID:12213832","PMID:14754902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion mediated by integrin","termid":"GO:0033627"},{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion mediated by integrin","synonyms":[{"name":"cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033631"}


id: PBO:0058172
data:
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id: FYPO:0006807
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id: GO:0102974
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id: PBO:0091174
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id: GO:0042578
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id: GO:0061471
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id: PBO:0051744
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id: PBO:0070025
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id: GO:0070395
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id: MOD:00472
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id: PBO:0082996
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id: PBO:0028538
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id: PBO:0064673
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id: MONDO:0014778
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id: PBO:0077727
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id: MONDO:0000332
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id: GO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antimicrobial peptide production.","definition_xrefs":["PMID:11807545","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"positive regulation of antimicrobial humoral response","termid":"GO:0002760"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"positively_regulates","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of antimicrobial peptide production","synonyms":[{"name":"activation of antimicrobial peptide production","type":"narrow"},{"name":"antimicrobial peptide induction","type":"exact"},{"name":"stimulation of antimicrobial peptide production","type":"narrow"},{"name":"up regulation of antimicrobial peptide production","type":"exact"},{"name":"up-regulation of antimicrobial peptide production","type":"exact"},{"name":"upregulation of antimicrobial peptide production","type":"exact"}],"termid":"GO:0002225"}


id: GO:0048857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a neural nucleus from its initial condition to its mature state. A neural nucleus is an anatomical structure consisting of a discrete aggregate of neuronal soma.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural nucleus development","termid":"GO:0048857"}


id: PR:Q9UUD8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18A7.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized peptidase C18A7.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18A7.01","synonyms":[{"name":"Spom972h-SPBC18A7.01","type":"exact"}],"termid":"PR:Q9UUD8"}


id: GO:1902614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anti-Mullerian hormone signaling pathway.","definition_xrefs":["PMID:23624077","GO_REF:0000058","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090100"},{"relation_name":"is_a","term_name":"regulation of anti-Mullerian hormone signaling pathway","termid":"GO:1902612"},{"relation_name":"positively_regulates","term_name":"anti-Mullerian hormone receptor signaling pathway","termid":"GO:1990262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of anti-Mullerian hormone signaling pathway","synonyms":[{"name":"activation of anti-Mullerian hormone signaling pathway","type":"narrow"},{"name":"up regulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"up-regulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"upregulation of anti-Mullerian hormone signaling pathway","type":"exact"}],"termid":"GO:1902614"}


id: PBO:0071854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 49","termid":"PBO:0071854"}


id: PBO:0042151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 13","termid":"PBO:0042151"}


id: PBO:0002744
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMSH","termid":"PBO:0002744"}


id: MONDO:0021097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm that arises anywhere in the ductal system of the breast. It is characterized by fibrovascular structures lined by benign epithelial and myoepithelial proliferations. Intraductal breast papillomas are classified as central, when they arise in large ducts, or peripheral, when they arise in the terminal ductal lobular units.","definition_xrefs":["NCIT:C3863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"intraductal papilloma","termid":"MONDO:0002060"},{"relation_name":"is_a","term_name":"intraductal papillary breast neoplasm","termid":"MONDO:0002061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal breast papilloma","secondary_identifiers":["SCTID:99571000119102","MEDGEN:65944","UMLS:C0238034","SCTID:254848002","DOID:1626"],"synonyms":[{"name":"breast duct papilloma","type":"related"},{"name":"breast papilloma","type":"exact"},{"name":"duct papilloma of breast","type":"exact"},{"name":"duct papilloma of the breast","type":"exact"},{"name":"ductal breast papilloma","type":"exact"},{"name":"intraductal breast papilloma","type":"exact"},{"name":"intraductal papilloma of breast","type":"exact"},{"name":"intraductal papilloma of the breast","type":"exact"},{"name":"mammary duct papilloma","type":"exact"},{"name":"papilloma of breast","type":"exact"},{"name":"papilloma of the breast","type":"exact"}],"termid":"MONDO:0021097","xrefs":{"Monarch":{"xref_id":"0021097"}}}


id: PBO:0044950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 6","termid":"PBO:0044950"}


id: PBO:0029431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029431"}


id: PBO:0051340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-18 (pseudogene)","termid":"PBO:0051340"}


id: PBO:0050576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 1","termid":"PBO:0050576"}


id: SO:0001283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2'-O-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylcytidine","secondary_identifiers":["RNAMOD:022"],"synonyms":[{"name":"2'-O-methylcytidine","type":"exact"},{"name":"Cm","type":"exact"},{"name":"two prime O methylcytidine","type":"exact"}],"termid":"SO:0001283"}


id: GO:0045723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"positive regulation of fatty acid biosynthetic process","synonyms":[{"name":"activation of fatty acid biosynthetic process","type":"narrow"},{"name":"positive regulation of fatty acid anabolism","type":"exact"},{"name":"positive regulation of fatty acid biosynthesis","type":"exact"},{"name":"positive regulation of fatty acid formation","type":"exact"},{"name":"positive regulation of fatty acid synthesis","type":"exact"},{"name":"stimulation of fatty acid biosynthetic process","type":"narrow"},{"name":"up regulation of fatty acid biosynthetic process","type":"exact"},{"name":"up-regulation of fatty acid biosynthetic process","type":"exact"},{"name":"upregulation of fatty acid biosynthetic process","type":"exact"}],"termid":"GO:0045723"}


id: GO:0032325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor catabolic process","termid":"GO:0032325"}


id: PBO:0070525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 24","termid":"PBO:0070525"}


id: GO:0097470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Type of synapse characterized by an electron-dense ribbon, lamella (bar) or spherical body in the presynaptic process cytoplasm.","definition_xrefs":["PMID:15626493","NIF_Subcellular:sao1884931180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ribbon synapse","synonyms":[{"name":"synapsis fasciolaris","type":"exact"}],"termid":"GO:0097470"}


id: MONDO:0700232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by variants in the KIZ gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"KIZ-related retinopathy","synonyms":[{"name":"KIZ-related retinopathy","type":"exact"}],"termid":"MONDO:0700232","xrefs":{"Monarch":{"xref_id":"0700232"}}}


id: GO:1902372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of tRNA catabolic process","termid":"GO:1902370"},{"relation_name":"is_a","term_name":"positive regulation of tRNA metabolic process","termid":"GO:1903328"},{"relation_name":"positively_regulates","term_name":"tRNA decay","termid":"GO:0016078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"positively_regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tRNA catabolic process","synonyms":[{"name":"activation of tRNA breakdown","type":"narrow"},{"name":"activation of tRNA catabolic process","type":"narrow"},{"name":"activation of tRNA catabolism","type":"narrow"},{"name":"activation of tRNA degradation","type":"narrow"},{"name":"positive regulation of tRNA breakdown","type":"exact"},{"name":"positive regulation of tRNA catabolism","type":"exact"},{"name":"positive regulation of tRNA degradation","type":"exact"},{"name":"up regulation of tRNA breakdown","type":"exact"},{"name":"up regulation of tRNA catabolic process","type":"exact"},{"name":"up regulation of tRNA catabolism","type":"exact"},{"name":"up regulation of tRNA degradation","type":"exact"},{"name":"up-regulation of tRNA breakdown","type":"exact"},{"name":"up-regulation of tRNA catabolic process","type":"exact"},{"name":"up-regulation of tRNA catabolism","type":"exact"},{"name":"up-regulation of tRNA degradation","type":"exact"},{"name":"upregulation of tRNA breakdown","type":"exact"},{"name":"upregulation of tRNA catabolic process","type":"exact"},{"name":"upregulation of tRNA catabolism","type":"exact"},{"name":"upregulation of tRNA degradation","type":"exact"}],"termid":"GO:1902372"}


id: FYPO:0007186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular reactive oxygen species level during vegetative growth","termid":"FYPO:0003004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular reactive oxygen species level during cellular response to hydroxyurea","synonyms":[{"name":"increased ROS accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased cellular ROS accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased cellular ROS level during cellular response to hydroxyurea","type":"exact"},{"name":"increased cellular reactive oxygen species accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to HU","type":"exact"},{"name":"increased cellular reactive oxygen species level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007186"}


id: MONDO:1011954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tibial dyschondroplasia, non-human animal","secondary_identifiers":["OMIA:001007"],"termid":"MONDO:1011954","xrefs":{"Monarch":{"xref_id":"1011954"}}}


id: MONDO:0016882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 20","secondary_identifiers":["MEDGEN:1825964","UMLS:C5679662","Orphanet:261846","GARD:20805"],"synonyms":[{"name":"partial deletion of chromosome type 20","type":"exact"},{"name":"partial monosomy of chromosome 20","type":"exact"}],"termid":"MONDO:0016882","xrefs":{"Monarch":{"xref_id":"0016882"}}}


id: MONDO:0002081
data:
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id: PBO:0064374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMPCA pseudogene 1","termid":"PBO:0064374"}


id: PBO:0080192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox","termid":"PBO:0080192"}


id: PBO:0016561
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Giardia lamblia single peptide cis-prenyltransferase","termid":"PBO:0016561"}


id: PBO:0056343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 2","termid":"PBO:0056343"}


id: GO:0051233
data:
  {"annotated_genes":["SJAG_04841","SJAG_04140","SJAG_01805","SJAG_00930","SJAG_01429","SJAG_02542","SJAG_02336","SJAG_00697","SJAG_03073","SJAG_04745","SJAG_02266","SJAG_01837","SJAG_00723","SJAG_01371","SJAG_03048","SJAG_04412","SJAG_00082","SJAG_01297","SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118668,120718,103341,105459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990385"},{"annotations":[113875,92826,113169,120720,93232,78959,78036,96645,95654,102959,119582,80639,105461,118669,91463,91831,104267,110208,102443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990023"}]},"cv_name":"cellular_component","definition":"The area in the center of the spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PMID:15296749","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00697":null,"SJAG_00723":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01429":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02266":null,"SJAG_02336":null,"SJAG_02542":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_04140":null,"SJAG_04412":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"spindle midzone","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"central spindle","type":"exact"},{"name":"spindle equator","type":"exact"}],"termid":"GO:0051233","terms_by_termid":{"GO:1990023":null,"GO:1990385":null}}


id: SO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a small temporal RNA (stRNA). Found in roundworm development.","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stRNA_encoding","synonyms":[{"name":"stRNA encoding","type":"exact"}],"termid":"SO:0000656"}


id: GO:0014815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Signaling between growth factors and their receptors that results in the activation of satellite cell, where this process is involved in skeletal muscle regeneration. Satellite cells are quiescent cells that are located between the basal lamina and the plasmalemma of the muscle fiber, which are the main contributors to postnatal muscle growth. In adult muscle, satellite cells become activated to divide and differentiate in response to muscle damage.","definition_xrefs":["PMID:16607119","GOC:ef","GOC:mtg_muscle"],"gene_count":0,"genotype_count":0,"name":"obsolete initiation of skeletal muscle satellite cell activation by growth factor signaling, involved in skeletal muscle regeneration (obsolete GO:0014815)","termid":"GO:0014815"}


id: PBO:0044086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A6","termid":"PBO:0044086"}


id: GO:0047516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propane-1,3-diol + NAD+ = 3-hydroxypropanal + NADH + H+.","definition_xrefs":["EC:1.1.1.202","MetaCyc:13-PROPANEDIOL-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,3-propanediol dehydrogenase activity","secondary_identifiers":["RHEA:23188"],"synonyms":[{"name":"1,3-PD:NAD+ oxidoreductase activity","type":"related"},{"name":"1,3-propanediol oxidoreductase activity","type":"related"},{"name":"1,3-propanediol:NAD+ oxidoreductase activity","type":"related"},{"name":"3-hydroxypropionaldehyde reductase activity","type":"related"},{"name":"propane-1,3-diol:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047516"}


id: PBO:0004195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INCENP, Pic1","termid":"PBO:0004195"}


id: PBO:0109630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napsin B aspartic peptidase (pseudogene)","termid":"PBO:0109630"}


id: PBO:0084336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore-associated protein; required for chromosome segregation and kinetochore clustering; required for normal segregation of chromosomes in meiosis and mitosis; component of the FEAR regulatory network, which promotes Cdc14p release from the nucleolus during anaphase; potential Cdc28p substrate","termid":"PBO:0084336"}


id: GO:0009582
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which an (non-living) abiotic stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of abiotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of abiotic stimulus","type":"related"}],"termid":"GO:0009582","terms_by_termid":{"GO:0050982":null}}


id: PATO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located far (not close to) in space in relation to another entity.","definition_xrefs":["PATOC:PM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far from","synonyms":[{"name":"distant from","type":"exact"},{"name":"remote from","type":"exact"}],"termid":"PATO:0002233"}


id: PBO:0062049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily U member 1 pseudogene","termid":"PBO:0062049"}


id: GO:0036501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimeric protein complex that contains the co-factors for the ATPase VCP/p97 (Cdc48p in budding yeast). In mammals, this complex consists of UFD1L (UFD1) and NPLOC4 (NPL4). In budding yeast, the complex is a dimer of Ufd1p and Npl4p.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:17289586","PMID:10811609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"UFD1-NPL4 complex","synonyms":[{"name":"Npl4p-Ufd1p complex","type":"exact"},{"name":"UFD1L-NPLOC4 complex","type":"exact"},{"name":"Ufd1-Npl4 binary complex","type":"exact"},{"name":"Ufd1-Npl4 cofactor complex","type":"exact"},{"name":"Ufd1/Npl4 complex","type":"exact"}],"termid":"GO:0036501"}


id: MONDO:0003680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondrosarcoma arising from the surface of bone. It is characterized by a lobulated growth pattern, high mitotic activity, myxoid stroma formation, and necrotic changes. It occurs in adults. Clinical presentation includes pain, and sometimes swelling.","definition_xrefs":["NCIT:C7357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone chondrosarcoma","termid":"MONDO:0000515"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"periosteal chondrosarcoma","secondary_identifiers":["DOID:5866","MONDO:0003683","ICDO:9221/3","DOID:5859","UMLS:C0334549","MEDGEN:90806"],"synonyms":[{"name":"chondrosarcoma (disease) of periosteum","type":"exact"},{"name":"juxtacortical chondrosarcoma","type":"exact"},{"name":"juxtacortical chondrosarcoma (morphologic abnormality)","type":"exact"},{"name":"periosteal chondrosarcoma","type":"exact"},{"name":"periosteum chondrosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003680","xrefs":{"Monarch":{"xref_id":"0003680"}}}


id: MONDO:0015339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adult form of the peroxisomal disease X-linked adrenoleukodystrophy (X-ALD), characterized by spastic paraparesia and often associated with peripheral adrenal insufficiency in males. Both males and females can be affected with AMN.","definition_xrefs":["Orphanet:139399"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked cerebral adrenoleukodystrophy","termid":"MONDO:0010247"},{"relation_name":"is_a","term_name":"adrenoleukodystrophy","termid":"MONDO:0018544"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0019053","MONDO:0005244","MONDO:0005066","MONDO:0002039"],"is_obsolete":false,"name":"adrenomyeloneuropathy","secondary_identifiers":["GARD:10614","SCTID:65389002","UMLS:C1527231","MEDGEN:315918","icd11.foundation:1214673956","NANDO:1200168","NANDO:2201248"],"synonyms":[{"name":"AMN","type":"exact"},{"name":"adrenomyeloneuropathy","type":"exact"}],"termid":"MONDO:0015339","xrefs":{"Monarch":{"xref_id":"0015339"}}}


id: PR:P05767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl39 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L39 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.04","synonyms":[{"name":"Spom972h-rpl39","type":"exact"},{"name":"YL36 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05767"}


id: SO:0100019
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide catalytic motif is a short (up to 20 amino acids) polypeptide region that contains one or more active site residues.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_catalytic_motif","synonyms":[{"name":"catalytic_motif","type":"related"},{"name":"polypeptide catalytic motif","type":"exact"}],"termid":"SO:0100019"}


id: PBO:0072782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAE1 pseudogene 1","termid":"PBO:0072782"}


id: PBO:0054947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2361","termid":"PBO:0054947"}


id: PATO:0000518
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000518 chemical sensitivity value (obsolete PATO:0000518)","termid":"PATO:0000518"}


id: PR:Q9UUI8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GDP-fucose transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01987","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C22F8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.04","secondary_identifiers":["UniProtKB:Q9UUI8"],"synonyms":[{"name":"Spom972h-SLC35C1","type":"exact"}],"termid":"PR:Q9UUI8"}


id: GO:0044398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which an organism causes swelling of soft tissues in another organism via the action of a venom. Edema is the result of excess water accumulation in tissues.","definition_xrefs":["PMID:20562011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of biological process","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated edema in another organism","synonyms":[{"name":"envenomation resulting in induction of edema in another organism","type":"exact"},{"name":"envenomation resulting in induction of edema in other organism","type":"exact"},{"name":"envenomation resulting in induction of oedema in other organism","type":"exact"}],"termid":"GO:0044398"}


id: MONDO:0012324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare partial deletion of the long arm of chromosome 14 characterized by ocular anomalies (anopthalmia/microphthalmia, ptosis, hypertelorism, exophthalmos), pituitary anomalies (pituitary hypoplasia/aplasia with growth hormone deficiency and growth retardation) and hand/foot anomalies (polydactyly, short digits, pes cavus). Other clinical features may include muscular hypotonia, psychomotor development delay/intellectual disability, dysmorphic signs (facial asymmetry, microretrognathia, high-arched palate, ear anomalies), congenital genitourinary malformations, hearing impairment. Smaller 14q22 deletions may have variable expression.","definition_xrefs":["Orphanet:264200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Frias syndrome","secondary_identifiers":["UMLS:C1864825","MEDGEN:400621","GARD:2384","MESH:C535639","Orphanet:2055","OMIM:609640"],"synonyms":[{"name":"14q22-q23 microdeletion syndrome","type":"exact"},{"name":"14q22q23 microdeletion syndrome","type":"exact"},{"name":"Del(14)(q22q23)","type":"exact"},{"name":"Frias syndrome","type":"exact"},{"name":"Growth deficiency, Facial anomalies, and brachydactyly","type":"related"},{"name":"chromosome 14Q22 deletion syndrome","type":"related"},{"name":"monosomy 14q22-q23","type":"exact"},{"name":"monosomy 14q22q23","type":"exact"}],"termid":"MONDO:0012324","xrefs":{"Monarch":{"xref_id":"0012324"}}}


id: PBO:0045146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 3","termid":"PBO:0045146"}


id: PBO:0045843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 33","termid":"PBO:0045843"}


id: PBO:0065350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked 2","termid":"PBO:0065350"}


id: PBO:0059930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 16","termid":"PBO:0059930"}


id: PBO:0087015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide-diphosphate reductase (RNR) small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits; relocalizes from nucleus to cytoplasm upon DNA replication stress; RNR4 has a paralog, RNR2, that arose from the whole genome duplication","termid":"PBO:0087015"}


id: PBO:0082327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; required for optimal CDC20 transcription; interacts with Rpn12p and Ubr1p; mutant has aneuploidy tolerance","termid":"PBO:0082327"}


id: PBO:0088594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ family ubiquitin-type ligase substrate adaptor Btb2","termid":"PBO:0088594"}


id: GO:1903510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving mucopolysaccharide.","definition_xrefs":["GOC:TermGenie","PMID:4236091","GO_REF:0000068","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete mucopolysaccharide metabolic process (obsolete GO:1903510)","synonyms":[{"name":"mucopolysaccharide metabolism","type":"exact"}],"termid":"GO:1903510"}


id: GO:1903233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis of neurotransmitter.","definition_xrefs":["GOC:TermGenie","PMID:16782817","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle exocytosis","termid":"GO:2000300"},{"relation_name":"regulates","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium ion-dependent exocytosis of neurotransmitter","termid":"GO:1903233"}


id: PBO:0003804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof9","termid":"PBO:0003804"}


id: MONDO:0800465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ectodermal dysplasia syndrome in which the cause of the disease is a variation in the CTSC gene. Variations in the CTSC gene can result in (1) Papillon-Lefevre syndrome (PLS) characterized by palmoplantar keratoderma, severe periodontitis affecting deciduous and permanent dentitions, and premature loss of dentition, (2) Haim-Munk syndrome (HMS) with additional features of arachnodactly, acroosteolysis, pesplanus, and onychogryphosis, (3) aggressive periodontitis 1 (AP1) characterized by severe and protracted gingival infections, leading to tooth loss. All three phenotypes are associated with autosomal recessive inheritance.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"CTSC-related disorder","synonyms":[{"name":"CTSC-related disorder","type":"exact"}],"termid":"MONDO:0800465","xrefs":{"Monarch":{"xref_id":"0800465"}}}


id: PBO:0090946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein disulfide isomerase Pdi4","termid":"PBO:0090946"}


id: PATO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of change of the bearer's angular velocity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Angular_acceleration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acceleration","termid":"PATO:0001028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angular acceleration","termid":"PATO:0001350"}


id: FYPO:0006249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA aminoacylation, the formation of an ester bond between a tRNA molecule and an amino acid specified by the tRNA anticodon, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0006418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal tRNA aminoacylation","synonyms":[{"name":"normal tRNA aminoacylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA aminoacylation during vegetative growth","type":"exact"},{"name":"normal tRNA aminoacylation for protein translation","type":"exact"}],"termid":"FYPO:0006249"}


id: PBO:0050575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate 2-O-sulfotransferase 1","termid":"PBO:0050575"}


id: MONDO:0013014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spondyloepimetaphyseal dysplasia characterized by severe short stature, facial dysmorphism and characteristic radiographic findings.","definition_xrefs":["Orphanet:171866"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, aggrecan type","secondary_identifiers":["SCTID:719165004","icd11.foundation:1133152894","OMIM:612813","UMLS:C2748544","GARD:10513","MEDGEN:411237","MESH:C567558"],"synonyms":[{"name":"SEMD, aggrecan type","type":"exact"},{"name":"SEMDAG","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, aggrecan type","type":"exact"}],"termid":"MONDO:0013014","xrefs":{"Monarch":{"xref_id":"0013014"}}}


id: PBO:0032715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_error-free_translesion_synthesis_of_cyclobutane_pyrimidine_dimers","termid":"PBO:0032715"}


id: GO:0102184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cycloartenol + NADH + O2 + H+ = 4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NAD + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cycloartenol 4alpha-methyl oxidase activity (obsolete GO:0102184)","termid":"GO:0102184"}


id: PBO:0075594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spire type actin nucleation factor 1","termid":"PBO:0075594"}


id: MONDO:0019958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete insulinoma (obsolete MONDO:0019958)","termid":"MONDO:0019958","xrefs":{"Monarch":{"xref_id":"0019958"}}}


id: PBO:0002570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p150-Glued","termid":"PBO:0002570"}


id: PATO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000748 discrimination value (obsolete PATO:0000748)","termid":"PATO:0000748"}


id: GO:0098529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction that targets a skeletal muscle fiber.","definition_xrefs":["GOC:mtg_OBO2OWL_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction development","termid":"GO:0007528"},{"relation_name":"part_of","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular junction development, skeletal muscle fiber","termid":"GO:0098529"}


id: PR:P87309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei4-dependent protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.08","synonyms":[{"name":"Spom972h-mde2","type":"exact"}],"termid":"PR:P87309"}


id: GO:0060551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of fructose 1,6-bisphosphate metabolism. Fructose 1,6-bisphosphate metabolism is the chemical reactions and pathways involving fructose 1,6-bisphosphate, also known as FBP. The D enantiomer is a metabolic intermediate in glycolysis and gluconeogenesis.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"regulates","term_name":"fructose 1,6-bisphosphate metabolic process","termid":"GO:0030388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fructose 1,6-bisphosphate metabolic process","termid":"GO:0060551"}


id: GO:1905395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a flavonoid stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22700048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to flavonoid","termid":"GO:1905395"}


id: PBO:0029716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_replication_during_vegetative_growth","termid":"PBO:0029716"}


id: PBO:0063394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6IP pseudogene 1","termid":"PBO:0063394"}


id: PBO:0030144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_L-thialysine","termid":"PBO:0030144"}


id: MONDO:0700162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granular cell tumor occurring in a dog.","definition_xrefs":["NCIT:C158784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine glioma","termid":"MONDO:0700151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine granular cell tumor","termid":"MONDO:0700162","xrefs":{"Monarch":{"xref_id":"0700162"}}}


id: PBO:0078751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 12 homolog","termid":"PBO:0078751"}


id: MONDO:0012880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the CHD7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 5 with or without anosmia","secondary_identifiers":["MEDGEN:765467","GARD:10773","MESH:C567220","OMIM:612370","UMLS:C3552553","ICD10CM:E23.0","DOID:0090084"],"synonyms":[{"name":"CHD7 hypogonadotropic hypogonadism","type":"exact"},{"name":"HH5","type":"related"},{"name":"KAL5","type":"narrow"},{"name":"Kallmann syndrome 5","type":"related"},{"name":"hypogonadotropic hypogonadism 5 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in CHD7","type":"exact"}],"termid":"MONDO:0012880","xrefs":{"Monarch":{"xref_id":"0012880"}}}


id: PBO:0089769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-type spliceosomal complex ATPase Cwf11","termid":"PBO:0089769"}


id: MONDO:0032909
data:
  {"annotated_genes":["SJAG_00601"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88530],"is_not":false,"summary":null,"term":"MONDO:0032909"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 3 deficiency, nuclear type 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1719382","OMIM:618775","UMLS:C5394051","GARD:16377"],"synonyms":[{"name":"MC3DN10","type":"related"},{"name":"MITOCHONDRIAL COMPLEX III DEFICIENCY, NUCLEAR TYPE 10","type":"related"}],"termid":"MONDO:0032909","terms_by_termid":{"MONDO:0032909":null},"xrefs":{"Monarch":{"xref_id":"0032909"}}}


id: FYPO:0002725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","termid":"FYPO:0001674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"decreased alpha-aminoadipate reductase activity","type":"exact"},{"name":"reduced L-aminoadipate-semialdehyde dehydrogenase activity","type":"exact"},{"name":"reduced alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0002725"}


id: GO:0050297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopa + O2 = 4-(L-alanin-3-yl)-2-hydroxy-cis,cis-muconate 6-semialdehyde + H+.","definition_xrefs":["RHEA:21220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"stizolobate synthase activity","secondary_identifiers":["EC:1.13.11.29","MetaCyc:RXN-8460"],"synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine:oxygen 4,5-oxidoreductase (recyclizing)","type":"related"},{"name":"DOPA dioxygenase activity","type":"exact"}],"termid":"GO:0050297"}


id: PBO:0047049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member D","termid":"PBO:0047049"}


id: MONDO:0001601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An malaria caused by infection with Plasmodium ovale.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malaria","termid":"MONDO:0005136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Plasmodium ovale malaria","secondary_identifiers":["SCTID:19341001","ICD10CM:B53.0","MEDGEN:508870","UMLS:C0152072","DOID:12919","ICD9:084.3"],"synonyms":[{"name":"Malariaby Plasmodium ovale","type":"exact"},{"name":"ovale malaria","type":"exact"}],"termid":"MONDO:0001601","xrefs":{"Monarch":{"xref_id":"0001601"}}}


id: MONDO:0009252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Essential fructosuria is a rare autosomal recessive disorder of fructose metabolism caused by a deficiency of fructokinaseenzyme activity. It is characterized by elevated fructosemia and presence of fructosuria following ingestion of fructose and related sugars (sucrose, sorbitol). Essential fructosuria is clinically asymptomatic and harmless. Dietary restriction is not indicated.","definition_xrefs":["Orphanet:2056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fructose metabolism","termid":"MONDO:0017689"},{"relation_name":"is_a","term_name":"disorder of galactose and fructose metabolism","termid":"MONDO:0800152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"essential fructosuria","secondary_identifiers":["SCTID:40278002","icd11.foundation:1362211287","MESH:C538068","MedDRA:10015487","DOID:0111680","ICD10CM:E74.11","MEDGEN:78645","OMIM:229800","UMLS:C0268160","GARD:6471"],"synonyms":[{"name":"fructokinase deficiency","type":"exact"},{"name":"fructosuria, essential","type":"exact"},{"name":"hepatic fructokinase deficiency","type":"related"},{"name":"ketohexokinase deficiency","type":"exact"}],"termid":"MONDO:0009252","xrefs":{"Monarch":{"xref_id":"0009252"}}}


id: GO:1903615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of protein tyrosine phosphatase activity.","definition_xrefs":["GO_REF:0000059","PMID:11129957","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein tyrosine phosphatase activity (obsolete GO:1903615)","synonyms":[{"name":"activation of PPT-phosphatase activity","type":"narrow"},{"name":"activation of PTP-phosphatase activity","type":"narrow"},{"name":"activation of PTPase activity","type":"narrow"},{"name":"activation of [phosphotyrosine]protein phosphatase activity","type":"narrow"},{"name":"activation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"narrow"},{"name":"activation of phosphotyrosine histone phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosine phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosine protein phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosylprotein phosphatase activity","type":"narrow"},{"name":"activation of protein phosphotyrosine phosphatase activity","type":"narrow"},{"name":"activation of protein tyrosine phosphatase activity","type":"narrow"},{"name":"activation of protein-tyrosine-phosphatase activity","type":"narrow"},{"name":"activation of protein-tyrosine-phosphate phosphohydrolase activity","type":"narrow"},{"name":"activation of tyrosine O-phosphate phosphatase activity","type":"narrow"},{"name":"activation of tyrosylprotein phosphatase activity","type":"narrow"},{"name":"positive regulation of PPT-phosphatase activity","type":"exact"},{"name":"positive regulation of PTP-phosphatase activity","type":"exact"},{"name":"positive regulation of PTPase activity","type":"exact"},{"name":"positive regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"positive regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"positive regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"positive regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"positive regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"positive regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"positive regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"up regulation of PPT-phosphatase activity","type":"exact"},{"name":"up regulation of PTP-phosphatase activity","type":"exact"},{"name":"up regulation of PTPase activity","type":"exact"},{"name":"up regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"up regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"up regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"up regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"up regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"up regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"up regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"up regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"up regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"up-regulation of PPT-phosphatase activity","type":"exact"},{"name":"up-regulation of PTP-phosphatase activity","type":"exact"},{"name":"up-regulation of PTPase activity","type":"exact"},{"name":"up-regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"up-regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"up-regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"up-regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"up-regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"up-regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"upregulation of PPT-phosphatase activity","type":"exact"},{"name":"upregulation of PTP-phosphatase activity","type":"exact"},{"name":"upregulation of PTPase activity","type":"exact"},{"name":"upregulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"upregulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"upregulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"upregulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"upregulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"upregulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"upregulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"upregulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"upregulation of tyrosylprotein phosphatase activity","type":"exact"}],"termid":"GO:1903615"}


id: PBO:0080659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 3","termid":"PBO:0080659"}


id: PBO:0045149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 7","termid":"PBO:0045149"}


id: MONDO:0975828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked 114","secondary_identifiers":["OMIM:301134"],"termid":"MONDO:0975828","xrefs":{"Monarch":{"xref_id":"0975828"}}}


id: PBO:0077256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 7","termid":"PBO:0077256"}


id: GO:0031781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 melanocortin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 3 melanocortin receptor binding","synonyms":[{"name":"type 3 melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0031781"}


id: PBO:0073504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 3","termid":"PBO:0073504"}


id: RO:HOM0000075
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves orthologous pairs of transcription factors and downstream regulated genes in different organisms.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_regulogy_relationship_with","synonyms":[{"name":"regulogous to","type":"exact"}],"termid":"RO:HOM0000075"}


id: PBO:0056442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 15","termid":"PBO:0056442"}


id: PBO:0047266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 246 member A","termid":"PBO:0047266"}


id: PBO:0076822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 5A","termid":"PBO:0076822"}


id: FYPO:0007847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the meiotic spindle is longer than normal during meiosis I.","definition_xrefs":["PomBase:mah","PMID:34346498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long meiotic spindle","termid":"FYPO:0000736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0000120","FYPO:0005447","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"long meiosis I spindle","synonyms":[{"name":"elongated meiosis I spindle","type":"exact"},{"name":"long spindle during first meiotic nuclear division","type":"exact"},{"name":"long spindle during meiosis I","type":"exact"}],"termid":"FYPO:0007847"}


id: GO:1904151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microglial cell mediated cytotoxicity.","definition_xrefs":["GOC:BHF","GOC:nc","PMID:19100238","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated cytotoxicity","termid":"GO:0001912"},{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"regulation of microglial cell mediated cytotoxicity","termid":"GO:1904149"},{"relation_name":"positively_regulates","term_name":"microglial cell mediated cytotoxicity","termid":"GO:0090634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microglial cell mediated cytotoxicity","synonyms":[{"name":"activation of microglial cell mediated cytotoxicity","type":"narrow"},{"name":"up regulation of microglial cell mediated cytotoxicity","type":"exact"},{"name":"up-regulation of microglial cell mediated cytotoxicity","type":"exact"},{"name":"upregulation of microglial cell mediated cytotoxicity","type":"exact"}],"termid":"GO:1904151"}


id: GO:0090250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that contributes to the establishment of planar cell polarity.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion involved in establishment of planar polarity","termid":"GO:0090250"}


id: GO:0010512
data:
  {"annotated_genes":["SJAG_00053","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92256,59709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol.","definition_xrefs":["GOC:vw","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010511"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"negatively_regulates","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0010512","terms_by_termid":{"GO:1902647":null}}


id: PBO:0064474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLE4 pseudogene 1","termid":"PBO:0064474"}


id: PBO:0113071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved mitochondrial YihA GTPase family member; required for efficient cellular respiration; localizes to mitochondrial inner membrane facing matrix side; associates with mitochondrial ribosome; required for de novo Cox1p synthesis at suboptimal temperatures; sumoylated under stress conditions","termid":"PBO:0113071"}


id: GO:0045251
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex facilitating the electron transfer from an acyl-CoA molecule to ubiquinone via its flavin adenine dinucleotide (FAD) cofactor. Usually contains an alpha and a beta subunit and the structural cofactor adenosine monophosphate (AMP). Part of a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the electron transport system.","definition_xrefs":["GOC:bhm","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"electron transfer flavoprotein complex","synonyms":[{"name":"ETF complex","type":"exact"}],"termid":"GO:0045251"}


id: GO:0023066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the vascular system.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via vascular system (obsolete GO:0023066)","synonyms":[{"name":"signal transmission via vascular system","type":"exact"}],"termid":"GO:0023066"}


id: GO:0060760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of a response to cytokine stimulus.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"positively_regulates","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to cytokine stimulus","termid":"GO:0060760"}


id: FYECO:0000120
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that specifies one or more substance(s) that are absent from the growth medium, assay buffer, etc. Typically, absence is only specified for substances that would normally be present.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical added or excluded","termid":"FYECO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping absent","termid":"FYECO:0000120"}


id: GO:0046365
data:
  {"annotated_genes":["SJAG_00605","SJAG_02945","SJAG_00839","SJAG_03903","SJAG_02009","SJAG_03828","SJAG_02954","SJAG_04334","SJAG_03818","SJAG_04276","SJAG_06622","SJAG_03373","SJAG_04192","SJAG_06621","SJAG_02796","SJAG_03174","SJAG_02951","SJAG_02010","SJAG_03660","SJAG_00461","SJAG_02135","SJAG_04660","SJAG_00027","SJAG_02107","SJAG_04495","SJAG_02369","SJAG_03958","SJAG_01310","SJAG_02950"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103094,96898,97632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[107395,99888,105304,111364,79634,107766,118353,111362,107765,111365,107396,111361,74209,107394,96400,105563,111360,100159,111363,111366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[58918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[97633,103095,96900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[115712,115706,115724,115713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"},{"annotations":[121057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02010":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03174":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03818":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03958":null,"SJAG_04192":null,"SJAG_04276":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04660":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"monosaccharide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"monosaccharide breakdown","type":"exact"},{"name":"monosaccharide catabolism","type":"exact"},{"name":"monosaccharide degradation","type":"exact"}],"termid":"GO:0046365","terms_by_termid":{"GO:0005998":null,"GO:0019303":null,"GO:0019568":null,"GO:0033499":null,"GO:0042843":null,"GO:0061621":null}}


id: MONDO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Trichohepatoenteric syndrome (obsolete MONDO:0000154)","termid":"MONDO:0000154","xrefs":{"Monarch":{"xref_id":"0000154"}}}


id: GO:0047101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: [a branched-chain alpha-keto acid] + CoA + NAD+ = [a branched-chain acyl-CoA] + CO2 + NADH. This enzyme system catalyzes the oxidative decarboxylation of branched-chain alpha-keto acids derived from L-leucine, L-isoleucine, and L-valine to branched-chain acyl-CoAs.","definition_xrefs":["EC:1.2.1.25"],"gene_count":0,"genotype_count":0,"name":"obsolete branched-chain alpha-keto acid dehydrogenase activity (obsolete GO:0047101)","termid":"GO:0047101"}


id: PBO:0042359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD101 antisense RNA 1","termid":"PBO:0042359"}


id: FYPO:0005414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the second meiotic nuclear division is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during meiosis","termid":"FYPO:0003611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein level during meiosis II","synonyms":[{"name":"increased protein accumulation during meiosis II","type":"related"},{"name":"increased protein level during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005414"}


id: PBO:0004070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase (predicted)","termid":"PBO:0004070"}


id: GO:0008114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = 6-phospho-2-dehydro-D-gluconate + NADPH.","definition_xrefs":["EC:1.1.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phosphogluconate 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.43-RXN"],"synonyms":[{"name":"2-keto-6-phosphogluconate reductase activity","type":"related"},{"name":"6-phospho-D-gluconate:NAD(P)+ 2-oxidoreductase activity","type":"related"},{"name":"6-phosphogluconate 2-dehydrogenase activity","type":"exact"},{"name":"6-phosphogluconate dehydrogenase (NAD)","type":"related"},{"name":"6-phosphogluconic dehydrogenase activity","type":"broad"},{"name":"gluconate 6-phosphate dehydrogenase activity","type":"related"},{"name":"phosphogluconate dehydrogenase activity","type":"related"}],"termid":"GO:0008114"}


id: PBO:0061945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily S member 2","termid":"PBO:0061945"}


id: MONDO:1012874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hearing loss and hypercholesterolaemia that occurs in pigs due to a mutation in the OSBPL2 gene created by genetic engineering or gene editing.","definition_xrefs":["OMIA:002360-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder, non-human animal","termid":"MONDO:1012969"},{"relation_name":"is_a","term_name":"inherited auditory system disease, non-human animal","termid":"MONDO:1012970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, OSBPL2-related, pig","termid":"MONDO:1012874","xrefs":{"Monarch":{"xref_id":"1012874"}}}


id: PBO:0041783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyphosine 2","termid":"PBO:0041783"}


id: GO:0034867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpent-2-enoyl-CoA + H2O = 2,4,4-trimethyl-3-hydroxypentanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpent-2-enoyl-CoA hydratase activity (obsolete GO:0034867)","termid":"GO:0034867"}


id: PBO:0036377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule organizer Mto2","termid":"PBO:0036377"}


id: GO:1904419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric loop formation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:BHF_telomere","PMID:22579284","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomeric loop formation","termid":"GO:1904418"},{"relation_name":"negatively_regulates","term_name":"telomeric loop formation","termid":"GO:0031627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"negative regulation of telomeric loop formation","synonyms":[{"name":"down regulation of t-loop biosynthesis","type":"exact"},{"name":"down regulation of t-loop formation","type":"exact"},{"name":"down regulation of telomeric loop formation","type":"exact"},{"name":"down-regulation of t-loop biosynthesis","type":"exact"},{"name":"down-regulation of t-loop formation","type":"exact"},{"name":"down-regulation of telomeric loop formation","type":"exact"},{"name":"downregulation of t-loop biosynthesis","type":"exact"},{"name":"downregulation of t-loop formation","type":"exact"},{"name":"downregulation of telomeric loop formation","type":"exact"},{"name":"inhibition of t-loop biosynthesis","type":"narrow"},{"name":"inhibition of t-loop formation","type":"narrow"},{"name":"inhibition of telomeric loop formation","type":"narrow"},{"name":"negative regulation of t-loop biosynthesis","type":"exact"},{"name":"negative regulation of t-loop formation","type":"exact"}],"termid":"GO:1904419"}


id: PBO:0070462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 5","termid":"PBO:0070462"}


id: FYPO:0004344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable when cells the population are subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased viability upon nitrogen starvation","synonyms":[{"name":"increased cell population viability upon nitrogen starvation","type":"exact"},{"name":"increased viability during nitrogen starvation","type":"exact"},{"name":"increased viability upon nitrogen depletion","type":"exact"},{"name":"increased viability upon nitrogen deprivation","type":"exact"}],"termid":"FYPO:0004344"}


id: PBO:0076720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichohyalin","termid":"PBO:0076720"}


id: PBO:0109976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated heterodimeric guanine nucleotide exchange factor (GEF) subunit Aut12","termid":"PBO:0109976"}


id: GO:1900398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pyrimidine nucleotide biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide biosynthetic process","termid":"GO:0030809"},{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleotide biosynthetic process","termid":"GO:1900397"},{"relation_name":"negatively_regulates","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"negative regulation of pyrimidine nucleotide biosynthetic process","synonyms":[{"name":"down regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"down regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"down regulation of pyrimidine nucleotide biosynthetic process","type":"exact"},{"name":"down regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"down regulation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"downregulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"downregulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"downregulation of pyrimidine nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of pyrimidine nucleotide formation","type":"exact"},{"name":"downregulation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"inhibition of pyrimidine nucleotide anabolism","type":"exact"},{"name":"inhibition of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"inhibition of pyrimidine nucleotide biosynthetic process","type":"narrow"},{"name":"inhibition of pyrimidine nucleotide formation","type":"exact"},{"name":"inhibition of pyrimidine nucleotide synthesis","type":"exact"},{"name":"negative regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"negative regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"negative regulation of pyrimidine nucleotide synthesis","type":"exact"}],"termid":"GO:1900398"}


id: PBO:0056113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase like 1","termid":"PBO:0056113"}


id: GO:0071504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heparin stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to heparin","termid":"GO:0071503"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to heparin","termid":"GO:0071504"}


id: MONDO:0015808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Folliculotropic mycosis fungoides is a rare variant of mycosis fungoides (MF), a form of cutaneous T-cell lymphoma, and is characterized by the presence of folliculotropic infiltrates in patch-plaque lesions usually involving the head and neck area.","definition_xrefs":["Orphanet:178512"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mycosis fungoides","termid":"MONDO:0009691"},{"relation_name":"is_a","term_name":"secondary catabolic mucinosis of skin","termid":"MONDO:0021655"},{"relation_name":"is_a","term_name":"mycosis fungoides variant","termid":"MONDO:0045071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"folliculotropic mycosis fungoides","secondary_identifiers":["MEDGEN:302080","NCIT:C35685","SCTID:404109006","UMLS:C1627767","icd11.foundation:1335995469","GARD:20154","ICD9:701.8"],"synonyms":[{"name":"alopecia mucinosa (t cell lymphoma)","type":"related"},{"name":"follicular mucinosis type mycosis fungoides","type":"exact"},{"name":"follicular mycosis fungoides","type":"exact"},{"name":"folliculotropic mycosis fungoides","type":"exact"},{"name":"mycosis fungoides-associated follicular mucinosis","type":"exact"}],"termid":"MONDO:0015808","xrefs":{"Monarch":{"xref_id":"0015808"}}}


id: GO:0010051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the patterning of the conducting tissues. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylem and phloem pattern formation","synonyms":[{"name":"vascular tissue pattern formation","type":"exact"}],"termid":"GO:0010051"}


id: GO:0045807
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105620],"is_not":false,"summary":null,"term":"GO:0045807"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of endocytosis","type":"narrow"},{"name":"stimulation of endocytosis","type":"narrow"},{"name":"up regulation of endocytosis","type":"exact"},{"name":"up-regulation of endocytosis","type":"exact"},{"name":"upregulation of endocytosis","type":"exact"}],"termid":"GO:0045807","terms_by_termid":{"GO:0045807":null}}


id: MONDO:0957240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 24","secondary_identifiers":["MEDGEN:1841082","OMIM:620342","DOID:0081449","UMLS:C5830446"],"termid":"MONDO:0957240","xrefs":{"Monarch":{"xref_id":"0957240"}}}


id: MONDO:0007464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Isolated distichiasis is a rare congenital eyelid anomaly characterized by an accessory row of eyelashes (that may be partial or complete) posterior to the normal row of cilia, at or close to the meibomian gland orifices, that is not associated with any other condition, and that may lead to ocular irritation and corneal damage if left untreated.","definition_xrefs":["Orphanet:99177"],"gene_count":0,"genotype_count":0,"name":"obsolete isolated distichiasis (obsolete MONDO:0007464)","secondary_identifiers":["OMIM:126300","ICD9:743.63","SCTID:95339000"],"synonyms":[{"name":"distichiasis","type":"related"},{"name":"eyelashes, two rows of","type":"related"}],"termid":"MONDO:0007464","xrefs":{"Monarch":{"xref_id":"0007464"}}}


id: MONDO:0004355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic leukemia that occurs during childhood.","definition_xrefs":["NCIT:C4989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"childhood leukemia","secondary_identifiers":["MEDGEN:234132","DOID:7757","UMLS:C1332977","NANDO:2100002"],"synonyms":[{"name":"childhood leukaemia (disease)","type":"exact"},{"name":"childhood leukemia","type":"exact"},{"name":"childhood leukemia (disease)","type":"exact"},{"name":"leukaemia","type":"broad"},{"name":"leukaemia (disease) of childhood","type":"exact"},{"name":"leukemia","type":"broad"},{"name":"leukemia (disease) of childhood","type":"exact"},{"name":"paediatric leukaemia (disease)","type":"exact"},{"name":"pediatric leukemia (disease)","type":"exact"}],"termid":"MONDO:0004355","xrefs":{"Monarch":{"xref_id":"0004355"}}}


id: PBO:0051451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-39","termid":"PBO:0051451"}


id: PBO:0017542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-F0 ATPase assembly protein (predicted)","termid":"PBO:0017542"}


id: FYPO:0003044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is abnormal. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["GO:0031507","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal heterochromatin assembly","synonyms":[{"name":"abnormal heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"abnormal heterochromatin assembly during vegetative growth","type":"exact"},{"name":"abnormal heterochromatin formation","type":"exact"}],"termid":"FYPO:0003044"}


id: GO:0042037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-L-histidine to form peptidyl-L-3'-methyl-L-histidine (otherwise known as pi-methylhistidine, pros-methylhistidine).","definition_xrefs":["RESID:AA0073"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-histidine methylation, to form pros-methylhistidine (obsolete GO:0042037)","synonyms":[{"name":"peptidyl-histidine pros-methylation","type":"exact"}],"termid":"GO:0042037"}


id: MOD:00131
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-2-aminoadipic acid.","definition_xrefs":["PubMed:358196","RESID:AA0122","PubMed:336041","PubMed:7419498","DeltaMass:353","Unimod:381#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-aminoadipic acid","synonyms":[{"name":"(2S)-2-aminohexanedioic acid","type":"exact"},{"name":"2-amino-1,4-butanedicarboxylic acid","type":"exact"},{"name":"L-2-aminoadipic acid","type":"exact"},{"name":"L-alpha-aminoadipic acid","type":"exact"},{"name":"Lys->AminoadipicAcid","type":"related"},{"name":"Lysoic","type":"exact"},{"name":"Oxidation of lysine (to aminoadipic acid)","type":"exact"},{"name":"alpha-amino adipic acid","type":"related"}],"termid":"MOD:00131"}


id: MONDO:0014475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 40 (SCA40) is a very rare subtype of autosomal dominant cerebellar ataxia type 1, characterized by the adult-onset of unsteady gait and dysarthria, followed by wide-based gait, gait ataxia, ocular dysmetria, intention tremor, scanning speech, hyperreflexia and dysdiadochokinesis.","definition_xrefs":["Orphanet:423275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 40","secondary_identifiers":["MEDGEN:1385103","GARD:12371","OMIM:616053","SCTID:734020000","DOID:0050986","UMLS:C4518336"],"synonyms":[{"name":"SCA40","type":"exact"},{"name":"spinocerebellar ataxia 40","type":"related"},{"name":"spinocerebellar ataxia type 40","type":"exact"}],"termid":"MONDO:0014475","xrefs":{"Monarch":{"xref_id":"0014475"}}}


id: MONDO:0002626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a accessory XI nerve spinal component.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"accessory nerve disorder","termid":"MONDO:0002636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal accessory nerve neoplasm","secondary_identifiers":["UMLS:C1263902","MEDGEN:266074","ICD9:239.7","DOID:337","SCTID:126977003","NCIT:C5829"],"synonyms":[{"name":"XIth cranial nerve neoplasms","type":"exact"},{"name":"XIth cranial nerve tumors","type":"exact"},{"name":"XIth cranial nerve tumours","type":"exact"},{"name":"accessory XI nerve spinal component neoplasm","type":"exact"},{"name":"accessory XI nerve spinal component neoplasm (disease)","type":"exact"},{"name":"accessory XI nerve spinal component tumor","type":"exact"},{"name":"accessory XI nerve spinal component tumour","type":"exact"},{"name":"accessory nerve neoplasm","type":"exact"},{"name":"eleventh cranial nerve neoplasm","type":"exact"},{"name":"eleventh cranial nerve neoplasms","type":"exact"},{"name":"eleventh cranial nerve tumor","type":"exact"},{"name":"eleventh cranial nerve tumors","type":"exact"},{"name":"eleventh cranial nerve tumour","type":"exact"},{"name":"eleventh cranial nerve tumours","type":"exact"},{"name":"neoplasm of accessory XI nerve spinal component","type":"exact"},{"name":"neoplasm of accessory nerve","type":"exact"},{"name":"neoplasm of eleventh cranial nerve","type":"exact"},{"name":"neoplasm of spinal accessory nerve","type":"exact"},{"name":"neoplasm of the eleventh cranial nerve","type":"exact"},{"name":"neoplasm of the spinal accessory nerve","type":"exact"},{"name":"spinal accessory nerve neoplasm","type":"exact"},{"name":"spinal accessory nerve neoplasms","type":"exact"},{"name":"spinal accessory nerve tumor","type":"exact"},{"name":"spinal accessory nerve tumors","type":"exact"},{"name":"spinal accessory nerve tumour","type":"exact"},{"name":"spinal accessory nerve tumours","type":"exact"},{"name":"tumor of accessory XI nerve spinal component","type":"exact"},{"name":"tumor of eleventh cranial nerve","type":"exact"},{"name":"tumor of spinal accessory nerve","type":"exact"},{"name":"tumor of the eleventh cranial nerve","type":"exact"},{"name":"tumor of the spinal accessory nerve","type":"exact"},{"name":"tumour of accessory XI nerve spinal component","type":"exact"},{"name":"tumour of eleventh cranial nerve","type":"exact"},{"name":"tumour of spinal accessory nerve","type":"exact"},{"name":"tumour of the eleventh cranial nerve","type":"exact"},{"name":"tumour of the spinal accessory nerve","type":"exact"}],"termid":"MONDO:0002626","xrefs":{"Monarch":{"xref_id":"0002626"}}}


id: PBO:0085704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in rRNA processing; required for maturation of the 35S primary transcript of pre-rRNA and for cleavage leading to mature 18S rRNA; homologous to eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase activity","termid":"PBO:0085704"}


id: PBO:0047104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 153 member C, pseudogene","termid":"PBO:0047104"}


id: PBO:0048434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,4-alpha-glucan branching enzyme 1","termid":"PBO:0048434"}


id: GO:0007271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of acetylcholine from a presynapse, across a chemical synapse, the subsequent activation of dopamine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dos","Wikipedia:Cholinergic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"synaptic transmission, cholinergic","synonyms":[{"name":"cholinergic synaptic transmission","type":"exact"}],"termid":"GO:0007271"}


id: PBO:0005543
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.57","termid":"PBO:0005543"}


id: PBO:0087896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; component of the heteromeric Ino2p/Ino4p basic helix-loop-helix transcription activator that binds inositol/choline-responsive elements (ICREs), required for derepression of phospholipid biosynthetic genes in response to inositol depletion; involved in diauxic shift","termid":"PBO:0087896"}


id: PR:000028951
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxiredoxin tpx1 complex in Schizosaccharomyces pombe.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxiredoxin tpx1","termid":"PR:000028932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tpx1/HyperOx(C48) dimer","synonyms":[{"name":"PomBase_original_PRO_term_name: peroxiredoxin tpx1 complex (Schizosaccharomyces pombe)","type":"exact"},{"name":"tpx1/HyperOx(C48) dimer","type":"exact"}],"termid":"PR:000028951"}


id: PBO:0062613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily V member 1","termid":"PBO:0062613"}


id: GO:0043634
data:
  {"annotated_genes":["SJAG_16455","SJAG_01176","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78099,101513,115257],"is_not":false,"summary":null,"term":"GO:0043634"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a noncoding RNA (ncRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target ncRNA.","definition_xrefs":["GOC:dgf","GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation-dependent RNA catabolic process","termid":"GO:0043633"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_03984":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyadenylation-dependent ncRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(A)-dependent ncRNA catabolic process","type":"related"}],"termid":"GO:0043634","terms_by_termid":{"GO:0043634":null}}


id: SO:0001871
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence GNAACR, bound by the transcription factor complex PBF (PCB-binding factor) and found in promoters of genes expressed during the M/G1 transition of the cell cycle.","definition_xrefs":["GO:mah","PMID:12411492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCB","termid":"SO:0001871"}


id: PBO:0117115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFSWAP antisense RNA 1","termid":"PBO:0117115"}


id: GO:0019935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An intracellular signaling cassette that starts with production or release of the cyclic nucleotide, and ends with the activation of downstream effectors that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclic-nucleotide-mediated signaling (obsolete GO:0019935)","synonyms":[{"name":"cyclic-nucleotide-mediated signalling","type":"exact"}],"termid":"GO:0019935"}


id: GO:0008153
data:
  {"annotated_genes":["SJAG_02408"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74780],"is_not":false,"summary":null,"term":"GO:0008153"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-aminobenzoate, an intermediate in the synthesis of folic acid, a compound which some organisms, e.g. prokaryotes, eukaryotic microbes, and plants, can synthesize de novo. Others, notably mammals, cannot. In yeast, it is present as a factor in the B complex of vitamins.","definition_xrefs":["PMID:11377864","ISBN:0198506732","MetaCyc:PWY-6543","PMID:11960743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"},{"relation_name":"is_a","term_name":"para-aminobenzoic acid metabolic process","termid":"GO:0046482"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02408":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"4-aminobenzoate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"4-aminobenzoic acid biosynthesis","type":"exact"},{"name":"4-aminobenzoic acid biosynthetic process","type":"exact"},{"name":"PABA biosynthesis","type":"exact"},{"name":"PABA biosynthetic process","type":"exact"},{"name":"p-aminobenzoic acid biosynthesis","type":"exact"},{"name":"p-aminobenzoic acid biosynthetic process","type":"exact"},{"name":"para-aminobenzoic acid anabolism","type":"exact"},{"name":"para-aminobenzoic acid biosynthesis","type":"exact"},{"name":"para-aminobenzoic acid biosynthetic process","type":"exact"},{"name":"para-aminobenzoic acid formation","type":"exact"},{"name":"para-aminobenzoic acid synthesis","type":"exact"},{"name":"vitamin Bx biosynthesis","type":"exact"},{"name":"vitamin Bx biosynthetic process","type":"exact"}],"termid":"GO:0008153","terms_by_termid":{"GO:0008153":null}}


id: PBO:0086902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative tRNA acetyltransferase; RNA-binding protein required for the formation of the modified nucleoside N(4)-acetylcytidine in serine and leucine tRNAs but not required for the same modification in 18S rRNA; protein abundance increases in response to DNA replication stress","termid":"PBO:0086902"}


id: FYPO:0000168
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121186,121246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the spindle assembly checkpoint of a mitotic cell cycle is abnormal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah","GO:0007094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic metaphase/anaphase transition","termid":"FYPO:0000200"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle checkpoint","termid":"FYPO:0001704"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000298","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic spindle assembly checkpoint","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"abnormal mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"abnormal mitotic spindle assembly checkpoint activation","type":"related"}],"termid":"FYPO:0000168","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: MONDO:0003925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the ciliated respiratory mucosa that lines the ethmoid sinus. It results from the invagination and proliferation of epithelial cells in the underlying stroma.","definition_xrefs":["NCIT:C6843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted papilloma","termid":"MONDO:0002537"},{"relation_name":"is_a","term_name":"ethmoid sinus Schneiderian papilloma","termid":"MONDO:0003923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethmoid sinus inverted papilloma","secondary_identifiers":["MEDGEN:232472","DOID:6562","UMLS:C1333474"],"synonyms":[{"name":"ethmoid sinus inverted papilloma","type":"exact"},{"name":"inverted papilloma of ethmoid sinus","type":"exact"},{"name":"inverted papilloma of the ethmoid sinus","type":"exact"}],"termid":"MONDO:0003925","xrefs":{"Monarch":{"xref_id":"0003925"}}}


id: GO:0090133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up a mesendoderm undergo directed movement. The mesendoderm is the epithelial tissue that gives rise to both mesoderm and endoderm.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium migration","termid":"GO:0090132"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"},{"relation_name":"part_of","term_name":"mesendoderm development","termid":"GO:0048382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesendoderm migration","termid":"GO:0090133"}


id: PBO:0058272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-1","termid":"PBO:0058272"}


id: PBO:0039447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and kinase domain containing 1","termid":"PBO:0039447"}


id: PBO:0045047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-acetyltransferase","termid":"PBO:0045047"}


id: GO:0099404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which telomeres of sister chromatids are joined during mitosis.","definition_xrefs":["PMID:26373281","GOC:BHF_telomere","GOC:BHF","GOC:rph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"mitotic sister chromatid cohesion at telomere","type":"exact"},{"name":"sister chromatid cohesion at telomere at mitosis","type":"exact"},{"name":"telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:0099404"}


id: PBO:0091510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide exchange factor for the ER lumenal Hsp70 chaperone, Sil1","termid":"PBO:0091510"}


id: MONDO:0001958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant cerebellar ataxia (obsolete MONDO:0001958)","termid":"MONDO:0001958","xrefs":{"Monarch":{"xref_id":"0001958"}}}


id: PBO:0018234
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory chain defects","termid":"PBO:0018234"}


id: PBO:0046356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 14","termid":"PBO:0046356"}


id: MONDO:0013569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous or compound heterozygous mutation in the WDR35 gene on chromosome 2p21.1.","definition_xrefs":["DOID:0110090","PMID:21473986","PMID:17935248"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"asphyxiating thoracic dystrophy 3","termid":"MONDO:0013127"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 7 with or without polydactyly","secondary_identifiers":["UMLS:C3279792","OMIM:614091","GARD:15756","MEDGEN:481422","Orphanet:498497"],"synonyms":[{"name":"SRPS5","type":"exact"},{"name":"SRTD7","type":"exact"},{"name":"short rib-polydactyly syndrome type 5","type":"exact"},{"name":"short rib-polydactyly syndrome type V","type":"exact"},{"name":"short rib-polydactyly syndrome, type 5","type":"exact"},{"name":"short-rib thoracic dysplasia 7 with or without polydactyly","type":"exact"}],"termid":"MONDO:0013569","xrefs":{"Monarch":{"xref_id":"0013569"}}}


id: PBO:0024473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein Spo20/Sec14","termid":"PBO:0024473"}


id: GO:0035999
data:
  {"annotated_genes":["SJAG_03914","SJAG_04156","SJAG_01616","SJAG_01766","SJAG_03712","SJAG_01466","SJAG_01126","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60013,61658,72673,73624,74336,77487,78374,106726],"is_not":false,"summary":null,"term":"GO:0035999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways by which one-carbon (C1) units are transferred between tetrahydrofolate molecules, to synthesize other tetrahydrofolate molecules.","definition_xrefs":["GOC:yaf","PMID:1825999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"one-carbon metabolic process","termid":"GO:0006730"},{"relation_name":"is_a","term_name":"tetrahydrofolate metabolic process","termid":"GO:0046653"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01126":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolate interconversion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-2201"],"termid":"GO:0035999","terms_by_termid":{"GO:0035999":null}}


id: PBO:0073989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 3","termid":"PBO:0073989"}


id: GO:0033981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-dopachrome + H+ = 5,6-dihydroxyindole + CO2.","definition_xrefs":["EC:4.1.1.84","RHEA:18441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"D-dopachrome decarboxylase activity","secondary_identifiers":["GO:0030928","KEGG_REACTION:R07313","MetaCyc:4.1.1.84-RXN"],"synonyms":[{"name":"D-dopachrome carboxy-lyase (5,6-dihydroxyindole-forming) activity","type":"related"},{"name":"D-dopachrome carboxy-lyase activity","type":"related"},{"name":"D-dopachrome tautomerase activity","type":"related"},{"name":"D-tautomerase activity","type":"related"},{"name":"dopachrome conversion activity","type":"broad"},{"name":"dopachrome decarboxylase activity","type":"exact"},{"name":"phenylpyruvate tautomerase II activity","type":"related"}],"termid":"GO:0033981"}


id: PBO:0081438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 287","termid":"PBO:0081438"}


id: PBO:0070868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL14 pseudogene 6","termid":"PBO:0070868"}


id: GO:1900642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of austinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of austinol biosynthetic process","termid":"GO:1900640"},{"relation_name":"positively_regulates","term_name":"austinol biosynthetic process","termid":"GO:1900560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of austinol biosynthetic process","synonyms":[{"name":"activation of austinol anabolism","type":"exact"},{"name":"activation of austinol biosynthesis","type":"exact"},{"name":"activation of austinol biosynthetic process","type":"narrow"},{"name":"activation of austinol formation","type":"exact"},{"name":"activation of austinol synthesis","type":"exact"},{"name":"positive regulation of austinol anabolism","type":"exact"},{"name":"positive regulation of austinol biosynthesis","type":"exact"},{"name":"positive regulation of austinol formation","type":"exact"},{"name":"positive regulation of austinol synthesis","type":"exact"},{"name":"up regulation of austinol anabolism","type":"exact"},{"name":"up regulation of austinol biosynthesis","type":"exact"},{"name":"up regulation of austinol biosynthetic process","type":"exact"},{"name":"up regulation of austinol formation","type":"exact"},{"name":"up regulation of austinol synthesis","type":"exact"},{"name":"up-regulation of austinol anabolism","type":"exact"},{"name":"up-regulation of austinol biosynthesis","type":"exact"},{"name":"up-regulation of austinol biosynthetic process","type":"exact"},{"name":"up-regulation of austinol formation","type":"exact"},{"name":"up-regulation of austinol synthesis","type":"exact"},{"name":"upregulation of austinol anabolism","type":"exact"},{"name":"upregulation of austinol biosynthesis","type":"exact"},{"name":"upregulation of austinol biosynthetic process","type":"exact"},{"name":"upregulation of austinol formation","type":"exact"},{"name":"upregulation of austinol synthesis","type":"exact"}],"termid":"GO:1900642"}


id: GO:0106022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle docking.","definition_xrefs":["PMID:22810233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of vesicle docking","termid":"GO:0106020"},{"relation_name":"positively_regulates","term_name":"vesicle docking","termid":"GO:0048278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0140056","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vesicle docking","synonyms":[{"name":"positive regulation of vesicle to membrane docking","type":"exact"}],"termid":"GO:0106022"}


id: PATO:0001161
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration which relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diluted","termid":"PATO:0001161"}


id: PR:P41892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc7 gene.","definition_xrefs":["UniProtKB:P41892","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.06c","synonyms":[{"name":"Spom972h-cdc7","type":"exact"}],"termid":"PR:P41892"}


id: MONDO:0004782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by excretion of large amounts of urine, accompanied by excessive thirst. Causes include deficiency of antidiuretic hormone or failure of the kidneys to respond to antidiuretic hormone. It may also be drug-related.","definition_xrefs":["NCIT:C43263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"diabetes insipidus","secondary_identifiers":["ICD9:253.5","DOID:9409","MESH:D003919","SCTID:15771004","MEDGEN:8349","NANDO:2100117","UMLS:C0011848","ICD10CM:E23.2"],"termid":"MONDO:0004782","xrefs":{"Monarch":{"xref_id":"0004782"}}}


id: PATO:0001908
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having more than one nucleus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleated","termid":"PATO:0002505"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multinucleate","termid":"PATO:0001908"}


id: MONDO:0043139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"visual epilepsy","termid":"MONDO:0001386"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"microcephaly sparse hair intellectual disability seizures","secondary_identifiers":["MEDGEN:444077","MESH:C537545","UMLS:C2931530"],"termid":"MONDO:0043139","xrefs":{"Monarch":{"xref_id":"0043139"}}}


id: PBO:0085046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential nuclear protein; null mutation has global effects on transcription; VHR2 has a paralog, VHR1, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085046"}


id: GO:0035873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which lactate is transported across a membrane. Lactate is 2-hydroxypropanoate, CH3-CHOH-COOH; L(+)-lactate is formed by anaerobic glycolysis in animal tissues, and DL-lactate is found in sour milk, molasses and certain fruit juices.","definition_xrefs":["ISBN:0198506732","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate transport","termid":"GO:0015727"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"lactate transmembrane transport","synonyms":[{"name":"lactate membrane transport","type":"exact"}],"termid":"GO:0035873"}


id: PR:Q9Y7Y9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18A7.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Y9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C18A7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18A7.02c","synonyms":[{"name":"Spom972h-SPBC18A7.02c","type":"exact"}],"termid":"PR:Q9Y7Y9"}


id: FYECO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tamoxifen was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tamoxifen","termid":"FYECO:0000368"}


id: PBO:0055824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRAT domain containing 2","termid":"PBO:0055824"}


id: PR:O59802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol N-acetylglucosaminyltransferase subunit C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04589","PANTHER:PTHR12982:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.04c","secondary_identifiers":["UniProtKB:O59802"],"synonyms":[{"name":"Spom972h-PIGC","type":"exact"}],"termid":"PR:O59802"}


id: GO:0004865
data:
  {"annotated_genes":["SJAG_04999","SJAG_03309","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76387,77839,89683],"is_not":false,"summary":null,"term":"GO:0004865"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a serine/threonine protein phosphatase, an enzyme that catalyzes the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase inhibitor activity","termid":"GO:0004864"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02380":null,"SJAG_03309":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0004857","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"protein serine/threonine phosphatase inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0004865","terms_by_termid":{"GO:0004865":null}}


id: PBO:0088879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIP41 type 2a phosphatase regulator Tip41","termid":"PBO:0088879"}


id: GO:0080034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the formation of an abnormal mass of cells in the host organism, induced by a symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18836040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host response to induction by symbiont of tumor, nodule or growth in host","termid":"GO:0080034"}


id: PBO:0111066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA, antisense cnt5","termid":"PBO:0111066"}


id: PATO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flexibility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"flexible","termid":"PATO:0001544"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased flexibility","synonyms":[{"name":"high flexibility","type":"exact"}],"termid":"PATO:0001776"}


id: MONDO:0016847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 1q is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome 1, with a highly variable phenotype principally characterized by intellectual disability, short stature, craniofacial dysmorphism (incl. macro/microcephaly, prominent forehead, posteriorly rotated, low-set ears, abnormal palpebral fissures, microphthalmia, broad, flat nasal bridge, high-arched palate, micro/retrognathia), cardiac defects and urogenital anomalies. Patients may also present cerebral (e.g. ventriculomegaly) and gastrointestinal malformations, as well as dystonic tremor and recurrent respiratory tract infections.","definition_xrefs":["Orphanet:261344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 1","termid":"MONDO:0016952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 1q","secondary_identifiers":["MEDGEN:1636619","SCTID:768927001","UMLS:C4708596","GARD:20781"],"synonyms":[{"name":"Duplication 1q","type":"exact"},{"name":"trisomy type 1q","type":"exact"}],"termid":"MONDO:0016847","xrefs":{"Monarch":{"xref_id":"0016847"}}}


id: GO:1902424
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104279],"is_not":false,"summary":null,"term":"GO:1902424"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation.","definition_xrefs":["PMID:22065639","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051986"},{"relation_name":"is_a","term_name":"regulation of attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1902423"},{"relation_name":"negatively_regulates","term_name":"attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0051315"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"negative regulation of attachment of mitotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"down regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"down regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"down regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"down regulation of mitotic bipolar attachment","type":"related"},{"name":"down-regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"down-regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"down-regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"down-regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"down-regulation of mitotic bipolar attachment","type":"related"},{"name":"downregulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"downregulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"downregulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"downregulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"downregulation of mitotic bipolar attachment","type":"related"},{"name":"inhibition of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"inhibition of attachment of spindle microtubules to kinetochore involved in mitosis","type":"narrow"},{"name":"inhibition of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"narrow"},{"name":"inhibition of attachment of spindle microtubules to mitotic chromosome","type":"narrow"},{"name":"inhibition of mitotic bipolar attachment","type":"related"},{"name":"negative regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"negative regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"negative regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"negative regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"negative regulation of mitotic attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"negative regulation of mitotic bipolar attachment","type":"related"}],"termid":"GO:1902424","terms_by_termid":{"GO:1902424":null}}


id: GO:1902300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which galactaric acid anion (galactarate) is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldarate transmembrane transport","termid":"GO:0042869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"galactarate transmembrane transport","secondary_identifiers":["GO:0042871"],"synonyms":[{"name":"D-galactarate transport","type":"related"},{"name":"galactarate transport","type":"related"},{"name":"galactaric acid anion transport","type":"exact"}],"termid":"GO:1902300"}


id: GO:1902247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of geranylgeranyl diphosphate.","definition_xrefs":["PMID:22672125","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"},{"relation_name":"is_a","term_name":"geranylgeranyl diphosphate metabolic process","termid":"GO:0033385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"geranylgeranyl diphosphate catabolic process","synonyms":[{"name":"geranylgeranyl diphosphate breakdown","type":"exact"},{"name":"geranylgeranyl diphosphate catabolism","type":"exact"},{"name":"geranylgeranyl diphosphate degradation","type":"exact"}],"termid":"GO:1902247"}


id: FYPO:0007999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle pole body is abolished during karyogamy.","definition_xrefs":["PomBase:mlr","PMID:25869666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to meiotic spindle pole body","termid":"FYPO:0003542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000054","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to spindle pole body during karyogamy","termid":"FYPO:0007999"}


id: PBO:0116787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP69B divergent transcript","termid":"PBO:0116787"}


id: PR:Q09893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.05","synonyms":[{"name":"Spom972h-SPAC24B11.05","type":"exact"}],"termid":"PR:Q09893"}


id: GO:0000302
data:
  {"annotated_genes":["SJAG_03303","SJAG_01734","SJAG_01216","SJAG_04953","SJAG_04403","SJAG_04399","SJAG_04632","SJAG_01199","SJAG_04788","SJAG_02515","SJAG_02183","SJAG_00141","SJAG_05181","SJAG_00668","SJAG_03653","SJAG_04823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97141],"is_not":false,"summary":null,"term":"GO:0000302"},{"annotations":[97078,101904,119379,120320,110801,106985],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[94998,61559,91246,75990,70437,66221,101171,90821,58381],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00668":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02183":null,"SJAG_02515":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to reactive oxygen species","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"response to AOS","type":"exact"},{"name":"response to ROI","type":"exact"},{"name":"response to ROS","type":"exact"},{"name":"response to active oxygen species","type":"exact"},{"name":"response to reactive oxidative species","type":"exact"},{"name":"response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:0000302","terms_by_termid":{"GO:0000302":null,"GO:0019430":null,"GO:0061692":null}}


id: GO:0003754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct non-covalent assembly of polypeptide-containing structures in vivo, but is not a component of these assembled structures when they are performing their normal biological function.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone activity (obsolete GO:0003754)","synonyms":[{"name":"chaperone activity","type":"exact"}],"termid":"GO:0003754"}


id: SO:0001639
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes an RNase P RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzymatic_RNA_gene","termid":"SO:0002180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase_P_RNA_gene","synonyms":[{"name":"RNase P RNA gene","type":"exact"}],"termid":"SO:0001639"}


id: GO:2000236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of tRNA metabolic process","termid":"GO:1903327"},{"relation_name":"is_a","term_name":"regulation of tRNA processing","termid":"GO:2000235"},{"relation_name":"negatively_regulates","term_name":"tRNA processing","termid":"GO:0008033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of tRNA processing","synonyms":[{"name":"negative regulation of tRNA maturation","type":"exact"}],"termid":"GO:2000236"}


id: MONDO:0013916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the ZNF423 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 14","secondary_identifiers":["UMLS:C3539071","MEDGEN:761313","DOID:0111122","OMIM:614844"],"synonyms":[{"name":"Joubert syndrome 19","type":"related"},{"name":"NPHP14","type":"exact"},{"name":"ZNF423 nephronophthisis (disease)","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in ZNF423","type":"exact"},{"name":"nephronophthisis 14","type":"exact"},{"name":"nephronophthisis type 14","type":"exact"}],"termid":"MONDO:0013916","xrefs":{"Monarch":{"xref_id":"0013916"}}}


