# terms

id: GO:1902771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of choline O-acetyltransferase activity.","definition_xrefs":["GOC:mr","PMID:7576634","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of choline O-acetyltransferase activity (obsolete GO:1902771)","synonyms":[{"name":"activation of CHOACTase activity","type":"narrow"},{"name":"activation of acetyl-CoA:choline O-acetyltransferase activity","type":"narrow"},{"name":"activation of choline O-acetyltransferase activity","type":"narrow"},{"name":"activation of choline acetylase activity","type":"narrow"},{"name":"activation of choline acetyltransferase activity","type":"narrow"},{"name":"positive regulation of CHOACTase activity","type":"exact"},{"name":"positive regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"positive regulation of choline acetylase activity","type":"exact"},{"name":"positive regulation of choline acetyltransferase activity","type":"exact"},{"name":"up regulation of CHOACTase activity","type":"exact"},{"name":"up regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"up regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"up regulation of choline acetylase activity","type":"exact"},{"name":"up regulation of choline acetyltransferase activity","type":"exact"},{"name":"up-regulation of CHOACTase activity","type":"exact"},{"name":"up-regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"up-regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"up-regulation of choline acetylase activity","type":"exact"},{"name":"up-regulation of choline acetyltransferase activity","type":"exact"},{"name":"upregulation of CHOACTase activity","type":"exact"},{"name":"upregulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"upregulation of choline O-acetyltransferase activity","type":"exact"},{"name":"upregulation of choline acetylase activity","type":"exact"},{"name":"upregulation of choline acetyltransferase activity","type":"exact"}],"termid":"GO:1902771"}


id: GO:0006666
data:
  {"annotated_genes":["SJAG_02488"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74771],"is_not":false,"summary":null,"term":"GO:0006666"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-keto-sphinganine, a derivative of sphinganine with a ketone group at C3. It is an intermediate in the synthesis of sphingosine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"3-keto-sphinganine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"3-keto-dihydrosphingosine metabolic process","type":"exact"},{"name":"3-keto-dihydrosphingosine metabolism","type":"exact"},{"name":"3-keto-sphinganine metabolism","type":"exact"}],"termid":"GO:0006666","terms_by_termid":{"GO:0006666":null}}


id: GO:0141055
data:
  {"annotated_genes":["SJAG_00341"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone H3 substrate.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone ubiquitin ligase activity","termid":"GO:0140852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004842","GO:0003824","GO:0016746","GO:0019787","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histone H3 ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141055","terms_by_termid":{"GO:0140851":null}}


id: PBO:0066967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 269","termid":"PBO:0066967"}


id: PBO:0073518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding glutamate rich protein like 3","termid":"PBO:0073518"}


id: GO:0021824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of cerebral cortex neuronal precursors tangentially through the cortex using interaction of the migrating cells with axons of other neurons.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:jid","GOC:dgh","GOC:dph","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex tangential migration using cell-axon interactions","termid":"GO:0021824"}


id: PBO:0028080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiple_mitotic_spindles","termid":"PBO:0028080"}


id: PBO:0062058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 5 pseudogene","termid":"PBO:0062058"}


id: FYPO:0005422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable and elongated, has a nucleus that is broken into multiple small fragments, and progression through the mitotic cell cycle is arrested in interphase during a cellular response to ultraviolet light. The cell contains no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated cell with fragmented nucleus and mitotic cell cycle arrest in interphase","termid":"FYPO:0004197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000004","FYPO:0002403","FYPO:0000631","FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV","synonyms":[{"name":"elongated inviable cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with fragmented nucleus and cell cycle arrest in mitotic interphase during cellular response to UV","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented nuclear DNA and mitotic cell cycle arrest in interphase during cellular response to UV","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus and cell cycle arrest in interphase during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented nucleus and mitotic interphase arrest during cellular response to UV","type":"exact"},{"name":"lethal; elongated vegetative cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV","type":"exact"},{"name":"mitotic cell cycle arrest in interphase and elongated inviable cell with fragmented nucleus during cellular response to UV","type":"exact"},{"name":"mitotic interphase arrested elongated inviable vegetative cell during cellular response to UV","type":"exact"}],"termid":"FYPO:0005422"}


id: MONDO:0012684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated arrhythmogenic right ventricular dysplasia in which the cause of the disease is a mutation in the JUP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 12","secondary_identifiers":["MEDGEN:409749","DOID:0110083","OMIM:611528","MESH:C566925","UMLS:C1969081"],"synonyms":[{"name":"ARVC12","type":"exact"},{"name":"ARVD12","type":"exact"},{"name":"JUP familial isolated arrhythmogenic right ventricular dysplasia","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 12","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia 12","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 12","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 12","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, type 12","type":"exact"},{"name":"familial arrhythmogenic right ventricular dysplasia 12","type":"exact"},{"name":"familial isolated arrhythmogenic right ventricular dysplasia caused by mutation in JUP","type":"exact"}],"termid":"MONDO:0012684","xrefs":{"Monarch":{"xref_id":"0012684"}}}


id: MOD:00060
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N-acetyl-L-serine.","definition_xrefs":["PubMed:14730666","RESID:AA0051","PubMed:11999733","PubMed:12175151","PubMed:15350136","PubMed:2106685","PubMed:1880797","PubMed:6997045","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated L-serine","termid":"MOD:00647"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-serine","synonyms":[{"name":"(2S)-2-acetamido-3-hydroxypropanoic acid","type":"exact"},{"name":"2-acetylamino-3-hydroxypropanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-hydroxypropanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetylserine","type":"exact"},{"name":"N-acetyl-L-serine","type":"exact"},{"name":"N-acetylated L-serine","type":"exact"},{"name":"N-acetylserine","type":"exact"},{"name":"NAcSer","type":"exact"}],"termid":"MOD:00060"}


id: PBO:0044059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin D","termid":"PBO:0044059"}


id: MONDO:0013779
data:
  {"annotated_genes":["SJAG_03119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88510],"is_not":false,"summary":null,"term":"MONDO:0013779"}]},"cv_name":"mondo","definition":"Any Wiskott-Aldrich syndrome in which the cause of the disease is a mutation in the WIPF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Wiskott-Aldrich syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3281001","OMIM:614493","OMIM:277970","MEDGEN:482631","GARD:15809","NCIT:C176820"],"synonyms":[{"name":"WAS2","type":"related"},{"name":"WIPF1 Wiskott-Aldrich syndrome","type":"exact"},{"name":"Wipf1 deficiency","type":"related"},{"name":"Wiskott-Aldrich syndrome 2","type":"exact"},{"name":"Wiskott-Aldrich syndrome caused by mutation in WIPF1","type":"exact"},{"name":"Wiskott-Aldrich syndrome type 2","type":"exact"}],"termid":"MONDO:0013779","terms_by_termid":{"MONDO:0013779":null},"xrefs":{"Monarch":{"xref_id":"0013779"}}}


id: PBO:0078764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 7","termid":"PBO:0078764"}


id: MONDO:0003019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder caused by an insufficient amount or availability of potassium, which generally manifests with myalgia, tetany, hypotension, polyuria, and polydipsia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"nutritional disorder","termid":"MONDO:0005137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"potassium deficiency disease","secondary_identifiers":["NCIT:C34939","UMLS:C1514284","DOID:4500","HP:0002900","SCTID:43339004","MEDGEN:271346","MESH:D007008","ICD10CM:E87.6","ICD9:276.8"],"synonyms":[{"name":"hypokalemia","type":"exact"},{"name":"hypopotassemia","type":"related"},{"name":"potassium deficiency disorder","type":"related"}],"termid":"MONDO:0003019","xrefs":{"Monarch":{"xref_id":"0003019"}}}


id: PBO:0044381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily D member 1, pseudogene","termid":"PBO:0044381"}


id: PBO:0067688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 5","termid":"PBO:0067688"}


id: GO:0071039
data:
  {"annotated_genes":["SJAG_03984","SJAG_03745","SJAG_04360","SJAG_01064","SJAG_01830","SJAG_03939","SJAG_00701","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72034,72379,101673,104912,113838,114745,117376,120136],"is_not":false,"summary":null,"term":"GO:0071039"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a cryptic unstable transcript (CUT), initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target CUT.","definition_xrefs":["PMID:16973436","GOC:dgf","GOC:krc","PMID:18007593","PMID:15935759","PMID:16973437","PMID:18591258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"is_a","term_name":"CUT catabolic process","termid":"GO:0071034"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00701":null,"SJAG_01064":null,"SJAG_01830":null,"SJAG_02622":null,"SJAG_03745":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent CUT catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent CUT catabolic process","type":"related"}],"termid":"GO:0071039","terms_by_termid":{"GO:0071039":null}}


id: PBO:0040676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR1 pseudogene 1","termid":"PBO:0040676"}


id: PBO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg16","termid":"PBO:0036462"}


id: MONDO:0015963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited renal tumor (obsolete MONDO:0015963)","secondary_identifiers":["Orphanet:183595"],"synonyms":[{"name":"genetic renal tumor","type":"related"}],"termid":"MONDO:0015963","xrefs":{"Monarch":{"xref_id":"0015963"}}}


id: MONDO:0004541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of testicular seminoma characterized by the presence of seminoma cells arranged in pseudoglandular patterns and few lymphocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular seminoma","termid":"MONDO:0003669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pseudoglandular variant testicular seminoma","secondary_identifiers":["NCIT:C40958","MEDGEN:273633","UMLS:C1515293","DOID:8358"],"synonyms":[{"name":"testicular seminoma, pseudoglandular variant","type":"exact"}],"termid":"MONDO:0004541","xrefs":{"Monarch":{"xref_id":"0004541"}}}


id: GO:0062034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-pipecolic acid, a metabolite of lysine.","definition_xrefs":["PMID:27758894","PMID:28330936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-pipecolic acid biosynthetic process","synonyms":[{"name":"L-pipecolate biosynthetic process","type":"exact"}],"termid":"GO:0062034"}


id: PBO:0087640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for meiotic nuclear division","termid":"PBO:0087640"}


id: PBO:0083473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RPM1","termid":"PBO:0083473"}


id: GO:0055056
data:
  {"annotated_genes":["SJAG_02719","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66055],"is_not":false,"summary":null,"term":"GO:0055056"},{"annotations":[116175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[119223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of the D-enantiomer of the hexose monosaccharide glucose from one side of a membrane to the other.","definition_xrefs":["GOC:jid","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02719":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"D-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8981574","Reactome:R-HSA-8981553","Reactome:R-HSA-5632804","Reactome:R-HSA-450095","GO:0015579","Reactome:R-HSA-499981","Reactome:R-HSA-5653873","Reactome:R-HSA-8981570","Reactome:R-HSA-5339524","Reactome:R-HSA-5632871","Reactome:R-HSA-8981564","Reactome:R-HSA-429094"],"termid":"GO:0055056","terms_by_termid":{"GO:0005358":null,"GO:0055056":null,"GO:0140108":null}}


id: PBO:0050234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 12","termid":"PBO:0050234"}


id: FYPO:0006641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during mitosis","termid":"FYPO:0005779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitotic metaphase","synonyms":[{"name":"normal protein localisation to kinetochore during mitotic metaphase","type":"exact"},{"name":"normal protein localization to kinetochore during metaphase of mitosis","type":"exact"}],"termid":"FYPO:0006641"}


id: PBO:0042364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD163 molecule","termid":"PBO:0042364"}


id: PBO:0069234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 489, pseudogene","termid":"PBO:0069234"}


id: PBO:0044278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 2","termid":"PBO:0044278"}


id: PBO:0044713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX11 antisense RNA 1","termid":"PBO:0044713"}


id: GO:0036526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a sugar or dicarbonyl from a cysteine residue of a glycated protein.","definition_xrefs":["GOC:bf","PMID:25416785","PMID:14568004","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein deglycation","termid":"GO:0036525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine deglycation","synonyms":[{"name":"deglycation of N-acetylcysteine","type":"related"}],"termid":"GO:0036526"}


id: GO:0075167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein gamma subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein gamma subunit-mediated signal transduction in response to host (obsolete GO:0075167)","synonyms":[{"name":"negative regulation of symbiont G-protein gamma subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075167"}


id: PBO:0065132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin RBR E3 ubiquitin protein ligase","termid":"PBO:0065132"}


id: GO:0030590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs during the first cell cycle in an embryo, in which anterior cortical contractions culminate in a single partial constriction of the embryo called the pseudocleavage furrow. An example of this process is found in nematode worms.","definition_xrefs":["GOC:mtg_sensu","PMID:7729583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudocleavage","termid":"GO:0030588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"first cell cycle pseudocleavage","termid":"GO:0030590"}


id: PBO:0035902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_dimethylation_at_double-strand_break_site_during_vegetative_growth","termid":"PBO:0035902"}


id: PBO:0046760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 2","termid":"PBO:0046760"}


id: MONDO:0013157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of FKRP","termid":"MONDO:0016156"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"},{"relation_name":"is_a","term_name":"myopathy caused by variation in FKRP","termid":"MONDO:0700066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005066","MONDO:0024322","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A5","secondary_identifiers":["DOID:0111241","GARD:15625","MEDGEN:461763","UMLS:C3150413","OMIM:613153"],"synonyms":[{"name":"MDDGA5","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, FKRP-related","type":"related"},{"name":"muscle-eye-brain-FKRP related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 5","type":"related"}],"termid":"MONDO:0013157","xrefs":{"Monarch":{"xref_id":"0013157"}}}


id: PBO:0013083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein SF3B14 Sap14","termid":"PBO:0013083"}


id: PR:G2TRM3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.19","synonyms":[{"name":"Spom972h-SPAC11D3.19","type":"exact"}],"termid":"PR:G2TRM3"}


id: PBO:0084412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor; component of the protein kinase C-mediated MAP kinase pathway involved in the maintenance of cell integrity; phosphorylated and activated by the MAP-kinase Slt2p; RLM1 has a paralog, SMP1, that arose from the whole genome duplication","termid":"PBO:0084412"}


id: FYPO:0008164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is abnormal during mitotic M-phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}


id: PATO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality inhering in a process by virtue of the bearer's being essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity of occurrent","termid":"PATO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessary (occurrent)","termid":"PATO:0001638"}


id: PBO:0055511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2945","termid":"PBO:0055511"}


id: GO:1905242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',5-triiodo-L-thyronine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:21382270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',5-triiodo-L-thyronine","synonyms":[{"name":"response to Liothyronin","type":"exact"},{"name":"response to Liothyronine","type":"exact"},{"name":"response to Liothyroninum","type":"exact"}],"termid":"GO:1905242"}


id: PATO:0001148
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001148 relative resistance value (obsolete PATO:0001148)","termid":"PATO:0001148"}


id: PBO:0061353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 11","termid":"PBO:0061353"}


id: GO:0061103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a glomus cell of the carotid body. The carotid body is a specialized chemosensory organ that helps respond to hypoxia.","definition_xrefs":["GOC:dph","PMID:6243386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carotid body glomus cell differentiation","termid":"GO:0061103"}


id: MONDO:0012987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the CD79B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agammaglobulinemia 6, autosomal recessive","secondary_identifiers":["DOID:0081138","MEDGEN:461557","GARD:15579","OMIM:612692","UMLS:C3150207"],"synonyms":[{"name":"CD79B autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 6, autosomal recessive","type":"exact"},{"name":"AGM6","type":"related"},{"name":"agammaglobulinemia, autosomal recessive, due to Cd79B defect","type":"related"},{"name":"autosomal agammaglobulinemia caused by mutation in CD79B","type":"exact"}],"termid":"MONDO:0012987","xrefs":{"Monarch":{"xref_id":"0012987"}}}


id: GO:1901045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oviposition.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of egg-laying behavior","termid":"GO:0046662"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of egg-laying behavior","synonyms":[{"name":"down regulation of egg laying","type":"broad"},{"name":"down regulation of egg-laying","type":"broad"},{"name":"down regulation of oviposition","type":"exact"},{"name":"down-regulation of egg laying","type":"broad"},{"name":"down-regulation of egg-laying","type":"broad"},{"name":"down-regulation of oviposition","type":"exact"},{"name":"downregulation of egg laying","type":"broad"},{"name":"downregulation of egg-laying","type":"broad"},{"name":"downregulation of oviposition","type":"exact"},{"name":"inhibition of egg laying","type":"broad"},{"name":"inhibition of egg-laying","type":"broad"},{"name":"inhibition of oviposition","type":"narrow"},{"name":"negative regulation of egg laying","type":"broad"},{"name":"negative regulation of egg-laying","type":"broad"},{"name":"negative regulation of oviposition","type":"exact"}],"termid":"GO:1901045"}


id: MONDO:0005261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pervasive developmental disorder - not otherwise specified (obsolete MONDO:0005261)","termid":"MONDO:0005261","xrefs":{"Monarch":{"xref_id":"0005261"}}}


id: MONDO:1012414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary hypoplasia with anasarca, non-human animal","termid":"MONDO:1011717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypoplasia with anasarca, cattle","secondary_identifiers":["OMIA:001562-9913"],"termid":"MONDO:1012414","xrefs":{"Monarch":{"xref_id":"1012414"}}}


id: PR:O14188
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"Ring assembly protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rng2","type":"exact"}],"termid":"PR:O14188"}


id: PBO:0056633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 12L","termid":"PBO:0056633"}


id: PBO:0030636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proton_transport","termid":"PBO:0030636"}


id: GO:0052196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont defense response (obsolete GO:0052196)","synonyms":[{"name":"down regulation by host of symbiont defense response","type":"exact"},{"name":"down-regulation by host of symbiont defense response","type":"exact"},{"name":"downregulation by host of symbiont defense response","type":"exact"},{"name":"inhibition by host of symbiont defense response","type":"narrow"}],"termid":"GO:0052196"}


id: SO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short hairpin RNA (shRNA) is an RNA transcript that makes a tight hairpin turn that can be used to silence target gene expression via RNA interference.","definition_xrefs":["PMID:6699500","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shRNA","secondary_identifiers":["http:http\\:en.wikipedia.org/wiki/Small_hairpin_RNA"],"synonyms":[{"name":"short hairpin RNA","type":"exact"},{"name":"small hairpin RNA","type":"exact"}],"termid":"SO:0002031"}


id: GO:0004783
data:
  {"annotated_genes":["SJAG_05027","SJAG_01693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71936,80124],"is_not":false,"summary":null,"term":"GO:0004783"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + 3 NADP+ + 3 H2O = sulfite + 3 NADPH + 3 H+.","definition_xrefs":["RHEA:13801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfite reductase activity","termid":"GO:0016002"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:SULFITE-REDUCT-RXN","EC:1.8.1.2"],"synonyms":[{"name":"H2S-NADP oxidoreductase activity","type":"related"},{"name":"NADPH-dependent sulfite reductase activity","type":"related"},{"name":"NADPH-sulfite reductase activity","type":"related"},{"name":"NADPH:sulfite reductase flavoprotein","type":"related"},{"name":"hydrogen-sulfide:NADP+ oxidoreductase activity","type":"related"},{"name":"sulfite (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"sulphite reductase (NADPH) activity","type":"exact"}],"termid":"GO:0004783","terms_by_termid":{"GO:0004783":null}}


id: MONDO:0006250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the ileum. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C4935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestinal neuroendocrine tumor G1","termid":"MONDO:0000540"},{"relation_name":"is_a","term_name":"colon neuroendocrine tumor G1","termid":"MONDO:0006155"},{"relation_name":"is_a","term_name":"ileal neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"ileal neuroendocrine tumor G1","secondary_identifiers":["MEDGEN:155426","MONDO:0021536","EFO:1000300","ICD9:209.03","SCTID:425318003","UMLS:C0745216"],"synonyms":[{"name":"carcinoid tumor of ileum","type":"exact"},{"name":"carcinoid tumor of the ileum","type":"exact"},{"name":"carcinoid tumour of ileum","type":"exact"},{"name":"carcinoid tumour of the ileum","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of ileum","type":"exact"},{"name":"ileal NET G1","type":"exact"},{"name":"ileal carcinoid tumor","type":"exact"},{"name":"ileal carcinoid tumour","type":"exact"},{"name":"ileal neuroendocrine tumor G1","type":"exact"},{"name":"ileum NET G1","type":"exact"},{"name":"ileum carcinoid tumor","type":"exact"},{"name":"ileum carcinoid tumor (disease)","type":"exact"},{"name":"ileum carcinoid tumour","type":"exact"},{"name":"ileum carcinoid tumour (disease)","type":"exact"},{"name":"ileum neuroendocrine neoplasm G1","type":"exact"},{"name":"ileum neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0006250","xrefs":{"Monarch":{"xref_id":"0006250"}}}


id: GO:1901491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:20133819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of lymphangiogenesis","termid":"GO:1901490"},{"relation_name":"negatively_regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphangiogenesis","synonyms":[{"name":"down regulation of lymph vessel formation","type":"exact"},{"name":"down regulation of lymphangiogenesis","type":"exact"},{"name":"down-regulation of lymph vessel formation","type":"exact"},{"name":"down-regulation of lymphangiogenesis","type":"exact"},{"name":"downregulation of lymph vessel formation","type":"exact"},{"name":"downregulation of lymphangiogenesis","type":"exact"},{"name":"inhibition of lymph vessel formation","type":"narrow"},{"name":"inhibition of lymphangiogenesis","type":"narrow"},{"name":"negative regulation of lymph vessel formation","type":"exact"}],"termid":"GO:1901491"}


id: MONDO:0022465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by anotia (congenital absence of the pinna) with a normal cochlea and vestibular apparatus, with facial paralysis caused by congenital absence of the entire right facial nerve, and congenital heart disease, which may present as atrioventricular septal defects or variations of tetralogy of Fallot.","definition_xrefs":["PMID:6470867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anotia facial palsy cardiac defect","termid":"MONDO:0022465","xrefs":{"Monarch":{"xref_id":"0022465"}}}


id: PBO:0034563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_iron-sulfur_cluster_binding","termid":"PBO:0034563"}


id: MONDO:0975955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoinflammation, panniculitis, and dermatosis syndrome","secondary_identifiers":["OMIMPS:617099"],"termid":"MONDO:0975955","xrefs":{"Monarch":{"xref_id":"0975955"}}}


id: GO:0045269
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the membrane-associated Fo proteins; rotates within the catalytic core during catalysis.","definition_xrefs":["PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete proton-transporting ATP synthase, central stalk (obsolete GO:0045269)","synonyms":[{"name":"hydrogen-transporting ATP synthase, central stalk","type":"exact"}],"termid":"GO:0045269"}


id: GO:0014034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a neural crest cell.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate commitment","termid":"GO:0048865"},{"relation_name":"part_of","term_name":"neural crest formation","termid":"GO:0014029"},{"relation_name":"part_of","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell fate commitment","termid":"GO:0014034"}


id: PBO:0067683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 870, pseudogene","termid":"PBO:0067683"}


id: GO:1901563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a camptothecin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to camptothecin","synonyms":[{"name":"response to CPT","type":"exact"}],"termid":"GO:1901563"}


id: PBO:0041038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated ATM activator 1","termid":"PBO:0041038"}


id: SO:0001086
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Describes the positions in a sequence where the authors are unsure about the sequence assignment.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequencing_information","termid":"SO:0001082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_uncertainty","secondary_identifiers":["BS:00181"],"synonyms":[{"name":"INSDC_feature:unsure","type":"exact"},{"name":"unsure","type":"exact"}],"termid":"SO:0001086"}


id: PBO:0066856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 156","termid":"PBO:0066856"}


id: GO:0036195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a muscle cell projection.","definition_xrefs":["GOC:kmv","PMID:22464329","PMID:15930100","CL:0000187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"muscle cell projection","termid":"GO:0036194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"muscle cell projection membrane","termid":"GO:0036195"}


id: PBO:0088783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Atf31","termid":"PBO:0088783"}


id: GO:0061265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the mesonephric nephron tubule as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"},{"relation_name":"part_of","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron tubule epithelial cell differentiation","termid":"GO:0061265"}


id: GO:2000504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood vessel remodeling.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of blood vessel remodeling","termid":"GO:0060312"},{"relation_name":"positively_regulates","term_name":"blood vessel remodeling","termid":"GO:0001974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel remodeling","synonyms":[{"name":"positive regulation of blood vessel remodelling","type":"exact"}],"termid":"GO:2000504"}


id: PBO:0012246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dos2 silencing complex subunit Mms19","termid":"PBO:0012246"}


id: GO:1902029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K18 acetylation.","definition_xrefs":["GOC:TermGenie","PMID:22110608"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K18 acetylation (obsolete GO:1902029)","synonyms":[{"name":"activation of histone H3 acetylation at K18","type":"exact"},{"name":"activation of histone H3-K18 acetylation","type":"narrow"},{"name":"activation of histone H3K18 acetylation","type":"exact"},{"name":"positive regulation of histone H3 acetylation at K18","type":"exact"},{"name":"positive regulation of histone H3K18 acetylation","type":"exact"},{"name":"up regulation of histone H3 acetylation at K18","type":"exact"},{"name":"up regulation of histone H3-K18 acetylation","type":"exact"},{"name":"up regulation of histone H3K18 acetylation","type":"exact"},{"name":"up-regulation of histone H3 acetylation at K18","type":"exact"},{"name":"up-regulation of histone H3-K18 acetylation","type":"exact"},{"name":"up-regulation of histone H3K18 acetylation","type":"exact"},{"name":"upregulation of histone H3 acetylation at K18","type":"exact"},{"name":"upregulation of histone H3-K18 acetylation","type":"exact"},{"name":"upregulation of histone H3K18 acetylation","type":"exact"}],"termid":"GO:1902029"}


id: MONDO:0014942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the GABRB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 45","secondary_identifiers":["DOID:0080428","MEDGEN:934658","GARD:16203","UMLS:C4310691","OMIM:617153"],"synonyms":[{"name":"DEE45","type":"exact"},{"name":"EIEE45","type":"exact"},{"name":"GABRB1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 45","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in GABRB1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 45","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 45; EIEE45","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 45","type":"exact"}],"termid":"MONDO:0014942","xrefs":{"Monarch":{"xref_id":"0014942"}}}


id: PBO:0082647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of serine palmitoyltransferase; responsible along with Lcb1p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine","termid":"PBO:0082647"}


id: PBO:0073861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A9","termid":"PBO:0073861"}


id: PBO:0080233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VLDLR antisense RNA 1","termid":"PBO:0080233"}


id: MONDO:0017239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial progressive hyper- and hypopigmentation is a rare, genetic, skin pigmentation anomaly disorder characterized by progressive, diffuse, partly blotchy, hyperpigmented lesions that are intermixed with multiple café-au-lait spots, hypopigmented maculae and lentigines and are located on the face, neck, trunk and limbs, as well as, frequently, the palms, soles and oral mucosa. Dispigmentation pattern can range from well isolated café-au-lait/hypopigmented patches on a background of normal-appearing skin to confetti-like or mottled appearance.","definition_xrefs":["Orphanet:280628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation with or without hypopigmentation, familial progressive","termid":"MONDO:0007771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial progressive hyper- and hypopigmentation","secondary_identifiers":["GARD:17298","icd11.foundation:1229773662","MEDGEN:1643385","UMLS:C4706423"],"synonyms":[{"name":"FPHH","type":"exact"}],"termid":"MONDO:0017239","xrefs":{"Monarch":{"xref_id":"0017239"}}}


id: FYPO:0007750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of a protein to the spindle is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle","termid":"FYPO:0007866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle during meiosis I","synonyms":[{"name":"normal protein localisation to spindle during meiosis I","type":"exact"},{"name":"normal protein localization to meiosis I spindle","type":"exact"},{"name":"normal protein localization to spindle during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007750"}


id: PBO:0042188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin C","termid":"PBO:0042188"}


id: MONDO:0007153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arteries, anomalies of","secondary_identifiers":["MEDGEN:360295","OMIM:108000","UMLS:C1876179"],"synonyms":[{"name":"arteries, anomalies of","type":"exact"}],"termid":"MONDO:0007153","xrefs":{"Monarch":{"xref_id":"0007153"}}}


id: GO:0051256
data:
  {"annotated_genes":["SJAG_03073","SJAG_04841","SJAG_01613","SJAG_01215","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78963,96654,99176,101129,110823],"is_not":false,"summary":null,"term":"GO:0051256"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the aggregation, arrangement and bonding together of a set of components forms the spindle midzone.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:24239120","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle midzone assembly","termid":"GO:0051255"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic spindle elongation","termid":"GO:0000022"},{"relation_name":"part_of","term_name":"mitotic spindle assembly","termid":"GO:0090307"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_01613":null,"SJAG_03073":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0000070","GO:0007049","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"mitotic spindle midzone assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitotic spindle midzone biogenesis","type":"exact"},{"name":"mitotic spindle midzone biosynthesis","type":"exact"},{"name":"mitotic spindle midzone formation","type":"exact"},{"name":"spindle midzone assembly involved in mitosis","type":"exact"},{"name":"spindle midzone biogenesis involved in mitosis","type":"exact"},{"name":"spindle midzone formation involved in mitosis","type":"exact"}],"termid":"GO:0051256","terms_by_termid":{"GO:0051256":null}}


id: GO:0033154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + oligogalacturonide(out) = ADP + phosphate + oligogalacturonide(in).","definition_xrefs":["PMID:17451747","GOC:mlg","PMID:11555291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type oligosaccharide transporter activity","termid":"GO:0015422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type oligogalacturonide transporter activity","secondary_identifiers":["TC:3.A.1.1.11","GO:0033155"],"synonyms":[{"name":"ATP-dependent oligogalacturonide transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled oligogalacturonide transmembrane transporter activity","type":"related"},{"name":"oligogalacturonide transmembrane transporter activity","type":"narrow"},{"name":"oligogalacturonide transporting ATPase activity","type":"related"},{"name":"oligogalacturonide-transporting ATPase activity","type":"exact"}],"termid":"GO:0033154"}


id: GO:0033182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone ubiquitination (obsolete GO:0033182)","termid":"GO:0033182"}


id: PBO:0031612
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_vacuolar_transport","termid":"PBO:0031612"}


id: PBO:0085632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in G2/M phase progression and response to DNA damage; interacts with Rad53p; contains an RNA recognition motif, a nuclear localization signal, and several SQ/TQ cluster domains; hyperphosphorylated in response to DNA damage","termid":"PBO:0085632"}


id: SO:0001272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A noncoding RNA that binds to a specific amino acid to allow that amino acid to be used by the ribosome during translation of RNA.","direct_ancestors":[{"relation_name":"has_quality","term_name":"tRNA_encoding","termid":"SO:0000663"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_gene","synonyms":[{"name":"tRNA gene","type":"exact"}],"termid":"SO:0001272"}


id: PR:Q9UR24
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp26 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP25A2.02c","synonyms":[{"name":"RAD26 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rhp26","type":"exact"}],"termid":"PR:Q9UR24"}


id: MONDO:0015080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymic tumor (obsolete MONDO:0015080)","termid":"MONDO:0015080","xrefs":{"Monarch":{"xref_id":"0015080"}}}


id: PBO:0076441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13","termid":"PBO:0076441"}


id: GO:1901683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an arsenate ion from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"arsenate ion transmembrane transporter activity","termid":"GO:1901683"}


id: PBO:0062641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily K member 2 pseudogene","termid":"PBO:0062641"}


id: PBO:0086804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YDL186W is not an essential gene","termid":"PBO:0086804"}


id: FYPO:0006690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell proceeds through the mitotic metaphase/anaphase transition in the presence of an uncorrected problem (such as chromosome structure or kinetochore attachment), and as a result undergoes abnormal chromosome segregation and subsequently dies.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe with abnormal chromosome segregation (obsolete FYPO:0006690)","synonyms":[{"name":"mitotic catastrophe with abnormal chromosome segregation during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe with abnormal chromosome segregation during vegetative growth","type":"exact"}],"termid":"FYPO:0006690"}


id: MONDO:0006888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse or multifocal peripheral neuropathy caused by the effects of a distant neoplasm. It may be attributed, in part, to the immune response to neoplasm-elaborated proteins. The neuropathy may be sensory, motor, mixed or autonomic. It may be the initial presentation of an occult neoplasm. Detection and resection of the neoplasm may result in cure.","definition_xrefs":["NCIT:C3981"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and toxic neuropathy (obsolete MONDO:0002336)","termid":"MONDO:0002336"},{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"},{"relation_name":"is_a","term_name":"paraneoplastic neurologic syndrome","termid":"MONDO:0018215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"paraneoplastic polyneuropathy","secondary_identifiers":["MEDGEN:124380","MESH:D020364","MedDRA:10062289","DOID:8681","ICD9:357.3","SCTID:77659000","UMLS:C0270932"],"synonyms":[{"name":"paraneoplastic polyneuropathy","type":"exact"}],"termid":"MONDO:0006888","xrefs":{"Monarch":{"xref_id":"0006888"}}}


id: PBO:0069339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 599, pseudogene","termid":"PBO:0069339"}


id: MOD:01558
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01558"}


id: MONDO:0020604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked dominant form of disease.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked dominant disease","secondary_identifiers":["DOID:0080009","MEDGEN:1798084","UMLS:C5566661"],"termid":"MONDO:0020604","xrefs":{"Monarch":{"xref_id":"0020604"}}}


id: GO:0009824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + dimethylallyl diphosphate = N(6)-(dimethylallyl)adenosine 5'-phosphate + diphosphate.","definition_xrefs":["RHEA:15285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"AMP dimethylallyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4307","KEGG_REACTION:R04038","EC:2.5.1.27"],"synonyms":[{"name":"2-isopentenyl-diphosphate:AMP 2-isopentenyltransferase activity","type":"exact"},{"name":"2-isopentenyl-diphosphate:AMP delta2-isopentenyltransferase activity","type":"exact"},{"name":"adenylate dimethylallyltransferase (AMP-dependent) activity","type":"exact"},{"name":"adenylate dimethylallyltransferase activity","type":"related"},{"name":"adenylate isopentenyltransferase activity","type":"broad"},{"name":"cytokinin synthase activity","type":"broad"},{"name":"dimethylallyl-diphosphate:AMP dimethylallyltransferase activity","type":"related"},{"name":"isopentenyltransferase activity","type":"broad"}],"termid":"GO:0009824"}


id: GO:0033698
data:
  {"annotated_genes":["SJAG_00581","SJAG_00868","SJAG_03867","SJAG_03255","SJAG_04576","SJAG_03230","SJAG_02846","SJAG_00441","SJAG_02439","SJAG_04758","SJAG_02981","SJAG_01230","SJAG_03441"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61509,63688,64477,77612,77740,77931,79134,80781,82078,90948,96514,108696,116231],"is_not":false,"summary":null,"term":"GO:0033698"}]},"cv_name":"cellular_component","definition":"A histone deacetylase complex which deacetylates histones preferentially in promoter regions. Composed of a two copies of catalytic histone deacetylase subunit (S. pombe Clr6/ S. cerevisiae Rpd3p), an Sds-3 family protein (S. pombe /S. cerevisiae Sds3(p) ), two copies of SIN3 family co-repressor (S. pombe Pst1/ S. cerevisiae Sin3p, a WD repeat protein/ histone chaperone (S. pombe Prw1/ S. cerevisiae Ume1p), and a zf- PHD finger ( S. pombe Png2/ S. cerevisiae Pho23p), plus 4 additional subunits, and associated factors.","definition_xrefs":["PMID:17450151","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sin3-type complex","termid":"GO:0070822"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_01230":null,"SJAG_02439":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03867":null,"SJAG_04576":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005694","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Rpd3L complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0000508"],"synonyms":[{"name":"Clr6 histone deacetylase complex I/I'","type":"exact"},{"name":"Clr6L complex","type":"exact"},{"name":"Rpd3C(L)","type":"exact"},{"name":"Sin3L complex","type":"exact"}],"termid":"GO:0033698","terms_by_termid":{"GO:0033698":null}}


id: PBO:0047188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 204 member D, pseudogene","termid":"PBO:0047188"}


id: GO:1901659
data:
  {"annotated_genes":["SJAG_03096","SJAG_02179","SJAG_06634","SJAG_00134","SJAG_00044","SJAG_00694","SJAG_05029","SJAG_04264","SJAG_04735","SJAG_01261","SJAG_01070","SJAG_01859","SJAG_05334","SJAG_03881","SJAG_04265","SJAG_01781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[118844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[71668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[71669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[71670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[100479,100480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[75214,95621,62513,67882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[99632,115808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[75100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"},{"annotations":[74177,96577,75464,76656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosyl compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_01070":null,"SJAG_01261":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_04265":null,"SJAG_04735":null,"SJAG_05029":null,"SJAG_05334":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosyl compound biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycosyl compound anabolism","type":"exact"},{"name":"glycosyl compound biosynthesis","type":"exact"},{"name":"glycosyl compound formation","type":"exact"},{"name":"glycosyl compound synthesis","type":"exact"}],"termid":"GO:1901659","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0031591":null,"GO:0043097":null,"GO:0043174":null,"GO:0046086":null,"GO:0046132":null,"GO:0071590":null,"GO:0071592":null}}


id: PBO:0088382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multidomain vesicle coat component Sec16","termid":"PBO:0088382"}


id: GO:2000225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of testosterone biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of testosterone biosynthetic process","termid":"GO:2000224"},{"relation_name":"negatively_regulates","term_name":"testosterone biosynthetic process","termid":"GO:0061370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of testosterone biosynthetic process","termid":"GO:2000225"}


id: FYPO:0000327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of trichostatin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to trichostatin A","synonyms":[{"name":"resistance to trichostatin A during mitotic cell cycle","type":"related"},{"name":"resistance to trichostatin A during vegetative growth","type":"exact"},{"name":"resistant to trichostatin A","type":"exact"}],"termid":"FYPO:0000327"}


id: GO:0000729
data:
  {"annotated_genes":["SJAG_00640","SJAG_03898","SJAG_05373","SJAG_02698","SJAG_01938","SJAG_01832","SJAG_01076","SJAG_01878","SJAG_05295","SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74029,74661,81767,90374,91003,97891,113706],"is_not":false,"summary":null,"term":"GO:0000729"},{"annotations":[81184,109703,118808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000706"}]},"cv_name":"biological_process","definition":"The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01076":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02698":null,"SJAG_03898":null,"SJAG_05295":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"DNA double-strand break processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000729","terms_by_termid":{"GO:0000706":null,"GO:0000729":null}}


id: PBO:0050796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTR5A antisense RNA 1","termid":"PBO:0050796"}


id: MONDO:0013777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pseudohypoaldosteronism type 2 in which the cause of the disease is a mutation in the WNK4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 2","termid":"MONDO:0019162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism type 2B","secondary_identifiers":["GARD:16776","icd11.foundation:853594829","UMLS:C1840390","MESH:C564161","Orphanet:88939","MEDGEN:374457","OMIM:614491"],"synonyms":[{"name":"PHA2B","type":"exact"},{"name":"WNK4 pseudohypoaldosteronism type 2","type":"exact"},{"name":"pseudohypoaldosteronism type 2 caused by mutation in WNK4","type":"exact"},{"name":"pseudohypoaldosteronism, type 2B","type":"related"},{"name":"pseudohypoaldosteronism, type IIB","type":"related"}],"termid":"MONDO:0013777","xrefs":{"Monarch":{"xref_id":"0013777"}}}


id: PBO:0078658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 11-1","termid":"PBO:0078658"}


id: PBO:0005370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing coactivator SRRM1 (predicted)","termid":"PBO:0005370"}


id: MONDO:1010081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune thrombocytopenic purpura that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia, non-human animal","termid":"MONDO:1010069"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thrombocytopenic purpura, non-human animal","secondary_identifiers":["OMIA:001104"],"termid":"MONDO:1010081","xrefs":{"Monarch":{"xref_id":"1010081"}}}


id: FYPO:0004740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position, composition or morphology of the of the actomyosin contractile ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal actomyosin contractile ring","synonyms":[{"name":"normal actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring during vegetative growth","type":"exact"}],"termid":"FYPO:0004740"}


id: PBO:0081399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 239","termid":"PBO:0081399"}


id: GO:0072538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to intracellular bacteria with a key role in inflammation and tissue injury. This immune response is associated with pathological autoimmune conditions such as multiple sclerosis, arthritis and psoriasis which is typically orchestrated by the production of particular cytokines by T-helper 17 cells, most notably interleukin-17, IL-21 and IL-22.","definition_xrefs":["GOC:BHF","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 type immune response","synonyms":[{"name":"Th17 immune response","type":"exact"}],"termid":"GO:0072538"}


id: PBO:0087513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heteropentameric Replication factor C (RF-C); RF-C is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon","termid":"PBO:0087513"}


id: PBO:0058190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4483","termid":"PBO:0058190"}


id: PBO:0060655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 4","termid":"PBO:0060655"}


id: MONDO:0054561
data:
  {"annotated_genes":["SJAG_04582"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88718],"is_not":false,"summary":null,"term":"MONDO:0054561"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anauxetic dysplasia","termid":"MONDO:0011773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04582":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"anauxetic dysplasia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617396","MEDGEN:1384439","UMLS:C4479357","DOID:0080962"],"synonyms":[{"name":"ANXD2","type":"related"},{"name":"anauxetic dysplasia 2","type":"exact"}],"termid":"MONDO:0054561","terms_by_termid":{"MONDO:0054561":null},"xrefs":{"Monarch":{"xref_id":"0054561"}}}


id: FYPO:0003798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis","termid":"FYPO:0000478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiosis II","synonyms":[{"name":"normal second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003798"}


id: PBO:0067510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 650, pseudogene","termid":"PBO:0067510"}


id: PBO:0050875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH3B divergent transcript","termid":"PBO:0050875"}


id: PBO:0052400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 1","termid":"PBO:0052400"}


id: PBO:0031747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_centromeric_sister_chromatid_cohesion","termid":"PBO:0031747"}


id: MONDO:0013521
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87309],"is_not":false,"summary":null,"term":"MONDO:0013521"}]},"cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal dominant mutation of TERT on chromosome 5p15.33.","definition_xrefs":["DOID:0070016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal dominant 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C176922","UMLS:C3151443","GARD:15741","OMIM:613989","MEDGEN:462793"],"synonyms":[{"name":"DKCA2","type":"exact"},{"name":"autosomal dominant dyskeratosis congenita 2","type":"related"},{"name":"dyskeratosis congenita, autosomal dominant 2","type":"exact"},{"name":"dyskeratosis congenita, autosomal dominant type 2","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive 4","type":"related"}],"termid":"MONDO:0013521","terms_by_termid":{"MONDO:0013521":null},"xrefs":{"Monarch":{"xref_id":"0013521"}}}


id: GO:0071531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a Rel homology domain (RHD) interaction.","definition_xrefs":["InterPro:IPR011539","GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete Rel homology domain-mediated complex assembly (obsolete GO:0071531)","synonyms":[{"name":"RHD domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071531"}


id: MONDO:0004966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the stomach.","definition_xrefs":["NCIT:C26780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastritis","secondary_identifiers":["HP:0005263","UMLS:C0017152","ICD9:535.0","EFO:0000217","ICD9:535.4","ICD9:535.40","MESH:D005756","icd11.foundation:1871672644","ICD9:535.01","ICD9:535.00","ICD9:535.41","MEDGEN:4843","SCTID:4556007","DOID:4029"],"synonyms":[{"name":"acute gastric mucosal erosion","type":"narrow"},{"name":"erosive gastritis","type":"narrow"},{"name":"erosive gastropathy","type":"narrow"},{"name":"gastritis","type":"exact"},{"name":"gastritis (disease)","type":"exact"},{"name":"inflammation of stomach","type":"exact"},{"name":"stomach inflammation","type":"exact"}],"termid":"MONDO:0004966","xrefs":{"Monarch":{"xref_id":"0004966"}}}


id: GO:1904779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to centrosome.","definition_xrefs":["GOC:TermGenie","PMID:17115027","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to centrosome","synonyms":[{"name":"regulation of protein localisation to centrosome","type":"exact"}],"termid":"GO:1904779"}


id: PBO:0117025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA osteoblastogenesis associated 1","termid":"PBO:0117025"}


id: PATO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001072 absolute energy (obsolete PATO:0001072)","termid":"PATO:0001072"}


id: PBO:0079409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 3","termid":"PBO:0079409"}


id: PBO:0088212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase","termid":"PBO:0088212"}


id: PBO:0079055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 11-1","termid":"PBO:0079055"}


id: GO:0004915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-6 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-6 receptor activity","synonyms":[{"name":"IL-6 receptor activity","type":"exact"},{"name":"IL-6R","type":"exact"},{"name":"gp130","type":"related"}],"termid":"GO:0004915"}


id: MONDO:1011534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperadrenocorticism that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperadrenocorticism, non-human animal","termid":"MONDO:1011403"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperadrenocorticism, horse","secondary_identifiers":["OMIA:000494-9796"],"termid":"MONDO:1011534","xrefs":{"Monarch":{"xref_id":"1011534"}}}


id: PBO:0048144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD6-FXYD2 readthrough","termid":"PBO:0048144"}


id: GO:0000750
data:
  {"annotated_genes":["SJAG_00993","SJAG_01718","SJAG_03340","SJAG_01345","SJAG_01978","SJAG_00990","SJAG_02923"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72468],"is_not":false,"summary":null,"term":"GO:0000750"},{"annotations":[95184],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[98268,95185,91076,65813,98937,108225],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"}]},"cv_name":"biological_process","definition":"A signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation with cellular fusion. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"},{"relation_name":"part_of","term_name":"response to pheromone triggering conjugation with cellular fusion","termid":"GO:0000749"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02923":null,"SJAG_03340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0000747","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"pheromone-dependent signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0007330","GO:0030454"],"synonyms":[{"name":"transduction of mating signal","type":"broad"}],"termid":"GO:0000750","terms_by_termid":{"GO:0000750":null,"GO:0071507":null,"GO:0090029":null}}


id: MONDO:8000014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of antiphospholipid syndrome.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"antiphospholipid syndrome","termid":"MONDO:8000010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0000426"],"is_obsolete":false,"name":"familial antiphospholipid syndrome","secondary_identifiers":["MEDGEN:419641","MESH:C531622","UMLS:C2930802","OMIM:107320"],"synonyms":[{"name":"Hughes syndrome","type":"broad"},{"name":"antiphospholipid syndrome, familial","type":"exact"}],"termid":"MONDO:8000014","xrefs":{"Monarch":{"xref_id":"8000014"}}}


id: GO:0005986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sucrose, the disaccharide fructofuranosyl-glucopyranoside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose metabolic process","termid":"GO:0005985"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"sucrose biosynthetic process","secondary_identifiers":["MetaCyc:SUCSYN-PWY"],"synonyms":[{"name":"sucrose anabolism","type":"exact"},{"name":"sucrose biosynthesis","type":"exact"},{"name":"sucrose formation","type":"exact"},{"name":"sucrose synthesis","type":"exact"}],"termid":"GO:0005986"}


id: SO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A protein coding transcript containing a retained intron.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding_primary_transcript","termid":"SO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_transcript_with_retained_intron","synonyms":[{"name":"mRNA with retained intron","type":"related"}],"termid":"SO:0002112"}


id: GO:0045706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salivary gland determination.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of salivary gland boundary specification","termid":"GO:0045704"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of salivary gland boundary specification","synonyms":[{"name":"activation of salivary gland determination","type":"narrow"},{"name":"positive regulation of salivary gland determination","type":"exact"},{"name":"stimulation of salivary gland determination","type":"narrow"},{"name":"up regulation of salivary gland determination","type":"exact"},{"name":"up-regulation of salivary gland determination","type":"exact"},{"name":"upregulation of salivary gland determination","type":"exact"}],"termid":"GO:0045706"}


id: PBO:0065669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type R","termid":"PBO:0065669"}


id: PBO:0060632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolin","termid":"PBO:0060632"}


id: GO:0036283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus under conditions of oxidative stress.","definition_xrefs":["PMID:9585505","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription factor import into nucleus in response to oxidative stress (obsolete GO:0036283)","synonyms":[{"name":"positive regulation of transcription factor import into nucleus in response to hydrogen peroxide","type":"related"}],"termid":"GO:0036283"}


id: PBO:0048221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase 2","termid":"PBO:0048221"}


id: PBO:0088789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rheb GAP, hamartin Tsc1","termid":"PBO:0088789"}


id: GO:0102521
data:
  {"annotated_genes":["SJAG_04265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63820],"is_not":false,"summary":null,"term":"GO:0102521"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + S-adenosyl-L-methionine + N1-methylguanine37 in tRNAPhe = L-methionine + 5'-deoxyadenosine + carbon dioxide + H2O + 4-demethylwyosine37 in tRNAPhe.","definition_xrefs":["PMID:34184886","GOC:pz","RHEA:36347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0140101","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"tRNA-4-demethylwyosine synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:4.1.3.44","MetaCyc:RXN-14516"],"termid":"GO:0102521","terms_by_termid":{"GO:0102521":null}}


id: GO:0010352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lithium ion out of a cell or organelle.","definition_xrefs":["PMID:17270011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lithium ion transmembrane transport","termid":"GO:0090452"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"lithium ion export across the plasma membrane","synonyms":[{"name":"lithium export","type":"exact"},{"name":"lithium ion efflux","type":"related"},{"name":"lithium ion export","type":"related"}],"termid":"GO:0010352"}


id: GO:0070614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tungstate (WO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tungstate is a bivalent oxoanion of tungsten.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tungstate ion transport","termid":"GO:0070614"}


id: GO:0035299
data:
  {"annotated_genes":["SJAG_01148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76562],"is_not":false,"summary":null,"term":"GO:0035299"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ATP = 1D-myo-inositol hexakisphosphate + ADP + H+.","definition_xrefs":["RHEA:20313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol pentakisphosphate kinase activity","termid":"GO:0120517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-7163","Reactome:R-HSA-1855179","KEGG_REACTION:R05202","Reactome:R-HSA-1855176","EC:2.7.1.158"],"synonyms":[{"name":"IP5 2-kinase activity","type":"related"},{"name":"Ins(1,3,4,5,6)P5 2-kinase activity","type":"related"},{"name":"inositol hexakisphosphate synthase","type":"related"},{"name":"inositol pentakisphosphate 2-kinase activity","type":"exact"},{"name":"inositol polyphosphate kinase activity","type":"related"},{"name":"inositol-pentakisphosphate 2-kinase activity","type":"related"}],"termid":"GO:0035299","terms_by_termid":{"GO:0035299":null}}


id: PBO:0018111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght8 (predicted)","termid":"PBO:0018111"}


id: GO:0060137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the mother that results in birth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"parturition","termid":"GO:0007567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal process involved in parturition","termid":"GO:0060137"}


id: GO:0012508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle transporting substances from the Golgi to the ER.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"COPI-coated vesicle membrane","termid":"GO:0030663"},{"relation_name":"part_of","term_name":"COPI-coated Golgi to ER transport vesicle","termid":"GO:0030142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Golgi to ER transport vesicle membrane","synonyms":[{"name":"Golgi to ER constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"Golgi to endoplasmic reticulum transport vesicle membrane","type":"exact"},{"name":"Golgi-ER transport vesicle membrane","type":"exact"},{"name":"Golgi-endoplasmic reticulum transport vesicle membrane","type":"exact"}],"termid":"GO:0012508"}


id: PBO:0058748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6872","termid":"PBO:0058748"}


id: GO:0047686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aryl sulfate + a phenol = a phenol + an aryl sulfate.","definition_xrefs":["EC:2.8.2.22","MetaCyc:ARYLSULFATE-SULFOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arylsulfate sulfotransferase activity","secondary_identifiers":["RHEA:51072"],"synonyms":[{"name":"ASST","type":"related"},{"name":"arylsulfate-phenol sulfotransferase activity","type":"related"},{"name":"arylsulfate:phenol sulfotransferase activity","type":"related"},{"name":"arylsulfotransferase","type":"broad"},{"name":"arylsulphate sulphotransferase activity","type":"exact"}],"termid":"GO:0047686"}


id: PBO:0017924
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nemaline Myopathy","termid":"PBO:0017924"}


id: GO:0007221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of transcription of specific genes as a result of Notch signaling, mediated by the Notch intracellular domain.","definition_xrefs":["PMID:12651094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"part_of","term_name":"Notch signaling pathway","termid":"GO:0007219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0023052","GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription of Notch receptor target","secondary_identifiers":["Reactome:R-HSA-9013508"],"synonyms":[{"name":"N receptor target transcription factor activation","type":"related"},{"name":"Notch receptor target transcription factor activation","type":"related"}],"termid":"GO:0007221"}


id: PBO:0089952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid biosynthesis protein","termid":"PBO:0089952"}


id: MONDO:0009817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive malignant osteopetrosis in which the cause of the disease is a mutation in the OSTM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile osteopetrosis with neuroaxonal dysplasia","termid":"MONDO:0010866"},{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive osteopetrosis 5","secondary_identifiers":["GARD:4153","MESH:C566883","OMIM:259720","MEDGEN:409627","UMLS:C1968603","DOID:0110939"],"synonyms":[{"name":"OPTB5","type":"exact"},{"name":"OSTM1 osteopetrosis (disease)","type":"exact"},{"name":"autosomal recessive osteopetrosis 5","type":"exact"},{"name":"autosomal recessive osteopetrosis type 5","type":"exact"},{"name":"infantile malignant osteopetrosis 3","type":"exact"},{"name":"osteopetrosis (disease) caused by mutation in OSTM1","type":"exact"},{"name":"osteopetrosis autosomal recessive 5","type":"related"},{"name":"osteopetrosis infantile malignant 3","type":"related"},{"name":"osteopetrosis, autosomal recessive 5","type":"related"},{"name":"osteopetrosis, autosomal recessive type 5","type":"exact"},{"name":"osteopetrosis, infantile malignant 3","type":"related"}],"termid":"MONDO:0009817","xrefs":{"Monarch":{"xref_id":"0009817"}}}


id: PBO:0082433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bridging factor involved in ER-associated protein degradation (ERAD); bridges the cytosolic Cdc48p-Npl1p-Ufd1p ATPase complex and the membrane associated Ssm4p and Hrd1p ubiquitin ligase complexes; contains a UBX (ubiquitin regulatory X) domain and a ubiquitin-associated (UBA) domain; redistributes from the ER to lipid droplets during the diauxic shift and stationary phase; required for the maintenance of lipid homeostasis; required for mitochondrial protein translocation-associated degradation","termid":"PBO:0082433"}


id: GO:0007355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Specification of the anterior (head and thoracic segments) of the embryo by the gap genes; exemplified in insects by the actions of hunchback gene product.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"zygotic determination of anterior/posterior axis, embryo","termid":"GO:0007354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior region determination","termid":"GO:0007355"}


id: MONDO:0012222
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87013],"is_not":false,"summary":null,"term":"MONDO:0012222"}]},"cv_name":"mondo","definition":"Alpha-N-acetylgalactosaminidase (NAGA) deficiency type 2 is a very rare mild adult type of NAGA deficiency with the features of angiokeratoma corporis diffusum and mild sensory neuropathy.","definition_xrefs":["Orphanet:79280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-N-acetylgalactosaminidase deficiency","termid":"MONDO:0017779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"alpha-N-acetylgalactosaminidase deficiency type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200136","SCTID:880065001","icd11.foundation:266505438","GARD:9161","OMIM:609242","DOID:0112319","UMLS:C1836522","MEDGEN:324539"],"synonyms":[{"name":"Alpha-N-acetylgalactosaminidase deficiency adult onset","type":"related"},{"name":"Alpha-N-acetylgalactosaminidase deficiency, adult-onset","type":"related"},{"name":"Alpha-N-acetylgalactosaminidase deficiency, type 2","type":"related"},{"name":"KANZAKI disease","type":"related"},{"name":"Kanzaki disease","type":"exact"},{"name":"NAGA deficiency type 2","type":"exact"},{"name":"Naga deficiency, type 2","type":"related"},{"name":"Schindler disease type 2","type":"exact"},{"name":"Schindler disease, type 2","type":"related"},{"name":"adult-onset Alpha-N-acetylgalactosaminidase deficiency","type":"exact"}],"termid":"MONDO:0012222","terms_by_termid":{"MONDO:0012222":null},"xrefs":{"Monarch":{"xref_id":"0012222"}}}


id: SO:0002315
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that increases the level or amount of gene product produced.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered_gene_product_level","termid":"SO:0002314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_gene_product_level","synonyms":[{"name":"increased gene product level","type":"exact"},{"name":"increased transcription level","type":"exact"},{"name":"increased_transcription_level","type":"exact"}],"termid":"SO:0002315"}


id: GO:1901647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synoviocyte proliferation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of synoviocyte proliferation","termid":"GO:1901645"},{"relation_name":"positively_regulates","term_name":"synoviocyte proliferation","termid":"GO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synoviocyte proliferation","synonyms":[{"name":"activation of synoviocyte proliferation","type":"narrow"},{"name":"up regulation of synoviocyte proliferation","type":"exact"},{"name":"up-regulation of synoviocyte proliferation","type":"exact"},{"name":"upregulation of synoviocyte proliferation","type":"exact"}],"termid":"GO:1901647"}


id: PBO:0065995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAI14 divergent transcript","termid":"PBO:0065995"}


id: PBO:0047703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin 2","termid":"PBO:0047703"}


id: MONDO:0009344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hirschsprung disease - nail hypoplasia - dysmorphism is a fatal malformative disorder that is characterized by Hirschsprung disease, hypoplastic nails, distal limb hypoplasia and minor craniofacial dysmorphic features (flat facies, upward slanting palpebral fissures, narrow philtrum, narrow, high arched palate, micrognathia, low set ears with abnormal helices). Hydronephrosis has also been reported. There have been no further descriptions of Hirschsprung disease - nail hypoplasia - dysmorphism syndrome in the literature since 1988.","definition_xrefs":["Orphanet:2153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Hirschsprung disease-nail hypoplasia-dysmorphism syndrome","secondary_identifiers":["OMIM:235760","SCTID:721223002","MEDGEN:344653","MESH:C535615","UMLS:C1856110","GARD:584"],"synonyms":[{"name":"Al Gazali-Donnai-Muller syndrome","type":"exact"},{"name":"Al-Gazali-Donnai-Mueller syndrome","type":"related"},{"name":"Hirschsprung disease with hypoplastic nails and dysmorphic facial features","type":"related"},{"name":"Hirschsprung's disease, hypoplastic nails, and minor dysmorphic features","type":"related"}],"termid":"MONDO:0009344","xrefs":{"Monarch":{"xref_id":"0009344"}}}


id: GO:1902830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21730158","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of spinal cord association neuron differentiation","termid":"GO:1902829"},{"relation_name":"negatively_regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spinal cord association neuron differentiation","synonyms":[{"name":"down regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"downregulation of spinal cord association neuron differentiation","type":"exact"},{"name":"downregulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"inhibition of spinal cord association neuron differentiation","type":"narrow"},{"name":"inhibition of spinal cord dorsal interneuron differentiation","type":"narrow"},{"name":"negative regulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902830"}


id: PBO:0014290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRE9 family cell wall 1,6-beta-glucan biosynthesis protein (predicted)","termid":"PBO:0014290"}


id: PBO:0078161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 38-2/delta variable 8","termid":"PBO:0078161"}


id: MONDO:1011529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Histiocytosis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytosis, non-human animal","termid":"MONDO:1011436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histiocytosis, pig","secondary_identifiers":["OMIA:000474-9823"],"termid":"MONDO:1011529","xrefs":{"Monarch":{"xref_id":"1011529"}}}


id: PBO:0066658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal oxygenase 2","termid":"PBO:0066658"}


id: GO:0009652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism, or part of an organism, such as leaves or tendrils, in response to a touch stimulus, usually toward or away from it.","definition_xrefs":["GOC:jl","PMID:16153165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"},{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thigmotropism","secondary_identifiers":["Wikipedia:Thigmotropism"],"termid":"GO:0009652"}


id: PBO:0080596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 26","termid":"PBO:0080596"}


id: PBO:0063392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 6 interacting protein","termid":"PBO:0063392"}


id: PBO:0079543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 5","termid":"PBO:0079543"}


id: MONDO:0012095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-brachydactyly-Pierre Robin syndrome is a rare developmental defect during embryogenesis characterized by mild to moderate intellectual disability and phsychomotor delay, Robin sequence (incl. severe micrognathia and soft palate cleft) and distinct dysmorphic facial features (e.g. synophris, short palpebral fissures, hypertelorism, small, low-set, and posteriorly angulated ears, bulbous nose, long/flat philtrum, and bow-shaped upper lip). Skeletal anomalies, such as brachydactyly, clinodactyly, small hands and feet, and oral manifestations (e.g. bifid, short tongue, oligodontia) are also associated. Additional features reported include microcephaly, capillary hemangiomas on face and scalp, ventricular septal defect, corneal clouding, nystagmus and profound sensorineural deafness.","definition_xrefs":["Orphanet:364577"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"intellectual disability-brachydactyly-Pierre Robin syndrome","secondary_identifiers":["GARD:17583","OMIM:608670","MESH:C563880","MEDGEN:325196","UMLS:C1837564"],"synonyms":[{"name":"ROBIN sequence with distinctive facial appearance and brachydactyly","type":"related"}],"termid":"MONDO:0012095","xrefs":{"Monarch":{"xref_id":"0012095"}}}


id: FYPO:0003060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination at a cis-acting homologous chromosome pairing region such as the sme2 locus is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased meiotic recombination at cis-acting homologous chromosome pairing region","synonyms":[{"name":"decreased meiotic recombination at sme2 locus","type":"narrow"},{"name":"reduced meiotic recombination at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003060"}


id: MONDO:1011300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute disease, non-human animal","termid":"MONDO:1011300","xrefs":{"Monarch":{"xref_id":"1011300"}}}


id: MONDO:0031057
data:
  {"annotated_genes":["SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87573],"is_not":false,"summary":null,"term":"MONDO:0031057"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, digenic","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823990","OMIM:620040","UMLS:C5774217"],"synonyms":[{"name":"DKCD","type":"exact"},{"name":"dyskeratosis congenita, digenic","type":"exact"}],"termid":"MONDO:0031057","terms_by_termid":{"MONDO:0031057":null},"xrefs":{"Monarch":{"xref_id":"0031057"}}}


id: PBO:0046586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 28","termid":"PBO:0046586"}


id: PBO:0042369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD177 molecule pseudogene 1","termid":"PBO:0042369"}


id: GO:0102943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S,3S)-2,3-dihydro-3-hydroxyanthranilic acid = (1R,6S)-6-ammonio-5-oxocyclohex-2-ene-1-carboxylate.","definition_xrefs":["GOC:pz","RHEA:28182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"trans-2,3-dihydro-3-hydroxy-anthranilate isomerase activity","secondary_identifiers":["MetaCyc:RXN-9031","EC:5.3.3.17"],"termid":"GO:0102943"}


id: PBO:0069076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 323, pseudogene","termid":"PBO:0069076"}


id: PBO:0082656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT core complex, involved in mRNA decapping; involved in transcription initiation and elongation and in mRNA degradation; conserved lysine in human homolog of Not3p and Not5p is mutated in cancers","termid":"PBO:0082656"}


id: PBO:0078224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 11-2","termid":"PBO:0078224"}


id: PBO:0061254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase interacting protein","termid":"PBO:0061254"}


id: MONDO:0010035
data:
  {"annotated_genes":["SJAG_03024"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89050],"is_not":false,"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"Smith-Lemli-Opitz syndrome (SLOS) is characterized by multiple congenital anomalies, intellectual deficit, and behavioral problems.","definition_xrefs":["Orphanet:818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"cholesterol biosynthetic process disease","termid":"MONDO:0045017"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"Smith-Lemli-Opitz syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:14692","GARD:5683","NORD:1724","OMIM:270400","MEDGEN:61231","NCIT:C85071","SCTID:43929004","icd11.foundation:1231469858","UMLS:C0175694","ICD9:759.89","MESH:D019082","NANDO:1200961","ICD10CM:E78.72","NANDO:2200979"],"synonyms":[{"name":"7-dehydrocholesterol reductase deficiency","type":"exact"},{"name":"RSH syndrome","type":"exact"},{"name":"Rutledge lethal multiple congenital anomaly syndrome","type":"exact"},{"name":"SLO syndrome","type":"exact"},{"name":"SLOS","type":"exact"},{"name":"Smith Lemli Opitz syndrome","type":"related"},{"name":"Smith-Lemli-Opitz syndrome","type":"exact"},{"name":"Smith-Opitz-inborn syndrome","type":"exact"},{"name":"lethal acrodysgenital syndrome","type":"related"},{"name":"polydactyly, sex reversal, renal hypoplasia, and unilobar lung","type":"related"},{"name":"polydactyly, sex reversal, renal hypoplasia, and unilobular lung","type":"related"}],"termid":"MONDO:0010035","terms_by_termid":{"MONDO:0010035":null},"xrefs":{"Monarch":{"xref_id":"0010035"}}}


id: GO:0010021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amylopectin, the (1->4) linked alpha glucose units with alpha-(1->6) linkages.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amylopectin biosynthetic process","synonyms":[{"name":"amylopectin anabolism","type":"exact"},{"name":"amylopectin biosynthesis","type":"exact"},{"name":"amylopectin formation","type":"exact"},{"name":"amylopectin synthesis","type":"exact"}],"termid":"GO:0010021"}


id: PBO:0039932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 37","termid":"PBO:0039932"}


id: FYPO:0003971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of that undergoes two or more rounds of cell division in which cells do not completely separate upon cytokinesis, form septa that are thicker than normal, and then die.","definition_xrefs":["PMID:9046095","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased septum thickness","termid":"FYPO:0001406"},{"relation_name":"has_part","term_name":"abnormal cell separation after cytokinesis resulting in septated cell","termid":"FYPO:0001972"},{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"},{"relation_name":"is_a","term_name":"increased septum thickness","termid":"FYPO:0001406"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, with abnormal septation","termid":"FYPO:0006878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0001985","FYPO:0000004","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, with abnormal cytokinetic cell separation and increased septum thickness","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, with abnormal cytokinetic cell separation and thick septa","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, with abnormal cytokinetic cell separation and increased septum thickness","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, with abnormal cytokinetic cell separation and increased septum thickness","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, with abnormal cytokinetic cell separation and increased septum thickness","type":"exact"}],"termid":"FYPO:0003971"}


id: PBO:0081530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 440","termid":"PBO:0081530"}


id: PBO:0011423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type","termid":"PBO:0011423"}


id: MONDO:0024770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome, familial, Behcet-like","termid":"MONDO:0031384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome, familial, X-linked, Behcet-like 2","secondary_identifiers":["MEDGEN:1808082","Orphanet:676125","OMIM:301074","UMLS:C5575495"],"synonyms":[{"name":"AIFBL2","type":"exact"},{"name":"autoinflammatory syndrome, familial, X-linked, Behcet-like 2","type":"exact"},{"name":"deficiency 1n ELF4, X-linked","type":"exact"}],"termid":"MONDO:0024770","xrefs":{"Monarch":{"xref_id":"0024770"}}}


id: PBO:0043491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centlein","termid":"PBO:0043491"}


id: PBO:0004667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L34 (predicted)","termid":"PBO:0004667"}


id: PBO:0056740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METAP2 pseudogene 1","termid":"PBO:0056740"}


id: PBO:0033791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_kinetochore_sliding_during_chromosome_recapture","termid":"PBO:0033791"}


id: PBO:0075976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 2","termid":"PBO:0075976"}


id: PBO:0077613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 4","termid":"PBO:0077613"}


id: FYPO:0007986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during mitotic interphase in which the localization of a protein to the microtubule overlap of cytoplasmic microtubule bundles is decreased.","definition_xrefs":["PomBase:mlr","PMID:19879140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to interphase microtubule","termid":"FYPO:0006182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to interphase microtubule bundle overlap","termid":"FYPO:0007986"}


id: PBO:0016934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium transport regulatory factor (predicted)","termid":"PBO:0016934"}


id: GO:0003053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates its heart rate at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of heart rate","synonyms":[{"name":"circadian regulation of heart contraction rate","type":"related"}],"termid":"GO:0003053"}


id: PBO:0075607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPON1 antisense RNA 1","termid":"PBO:0075607"}


id: GO:0047406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H2O = N-acetyl-D-glucosamine + L-asparagine.","definition_xrefs":["EC:3.2.2.11","RHEA:12324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"beta-aspartyl-N-acetylglucosaminidase activity","secondary_identifiers":["KEGG_REACTION:R01266","MetaCyc:3.2.2.11-RXN"],"synonyms":[{"name":"1-beta-aspartyl-N-acetyl-D-glucosaminylamine L-asparaginohydrolase activity","type":"related"},{"name":"beta-aspartylacetylglucosaminidase activity","type":"related"}],"termid":"GO:0047406"}


id: PATO:0001012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001012 relative intensity value (obsolete PATO:0001012)","termid":"PATO:0001012"}


id: PATO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000368 towards1 (obsolete PATO:0000368)","termid":"PATO:0000368"}


id: GO:0102382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rebaudioside B + UDP-alpha-D-glucose = rebaudioside A + UDP.","definition_xrefs":["RHEA:61760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"rebaudioside B glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13518"],"termid":"GO:0102382"}


id: PR:Q9HFE4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP16F5.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFE4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiol-specific monooxygenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.08c","synonyms":[{"name":"Spom972h-SPBP16F5.08c","type":"exact"},{"name":"flavin-dependent monooxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFE4"}


id: GO:0008459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 6'-sulfate.","definition_xrefs":["EC:2.8.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondroitin sulfotransferase activity","termid":"GO:0034481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chondroitin 6-sulfotransferase activity","secondary_identifiers":["MetaCyc:CHONDROITIN-6-SULFOTRANSFERASE-RXN","Reactome:R-HSA-3595175","RHEA:11108","KEGG_REACTION:R02181","Reactome:R-HSA-2018682"],"synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulfate (PAPS):chondroitin sulfate sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:chondroitin 6'-sulfotransferase activity","type":"related"},{"name":"chondroitin 6-O-sulfotransferase activity","type":"related"},{"name":"chondroitin 6-sulphotransferase activity","type":"exact"},{"name":"terminal 6-sulfotransferase activity","type":"related"}],"termid":"GO:0008459"}


id: MONDO:0020584
data:
  {"annotated_genes":["SJAG_02796","SJAG_04334","SJAG_01351","SJAG_00605","SJAG_04495","SJAG_00839","SJAG_05283","SJAG_02297","SJAG_00988","SJAG_02009","SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[87297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[87742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[88046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[87515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[88902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[88018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[88301,88300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[87436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[87627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Any form of anemia that results from the absence of, or the defective action of, any enzyme.","definition_xrefs":["NCIT:C35472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia due to enzyme disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0494226","MEDGEN:105411"],"synonyms":[{"name":"anemia due to enzyme disorder","type":"exact"}],"termid":"MONDO:0020584","terms_by_termid":{"MONDO:0009113":null,"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null,"MONDO:0014221":null},"xrefs":{"Monarch":{"xref_id":"0020584"}}}


id: GO:0048407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to platelet-derived growth factor.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"platelet-derived growth factor binding","synonyms":[{"name":"PDGF binding","type":"exact"}],"termid":"GO:0048407"}


id: PBO:0059743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 17","termid":"PBO:0059743"}


id: FYPO:0008282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate (5-IP7) is lower than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular myo-inositol level","termid":"FYPO:0008280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular 5-IP7 level","termid":"FYPO:0008282"}


id: PBO:0041866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 12 (gene/pseudogene)","termid":"PBO:0041866"}


id: MONDO:0016316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucopolysaccharidosis type 2, attenuated form (MPS2att), the less severe form of MPS2, leads to a massive accumulation of glycosaminoglycans and a wide variety of symptoms including distinctive facies, short stature, cardiorespiratory and skeletal findings. It is differentiated from mucopolysaccharidosis type 2, severe form by the absence of cognitive decline.","definition_xrefs":["Orphanet:217093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 2","termid":"MONDO:0010674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"mucopolysaccharidosis type 2, attenuated form","secondary_identifiers":["UMLS:C5679815","NANDO:1200099","MEDGEN:1826165","NANDO:2201171","SCTID:5667009","GARD:17119","NANDO:2201172"],"synonyms":[{"name":"Hunter syndrome type B","type":"exact"},{"name":"MPS2B","type":"exact"},{"name":"MPSIIB","type":"exact"},{"name":"iduronate 2-sulfatase deficiency type B","type":"exact"},{"name":"mucopolysaccharidosis type 2, attenuated form","type":"exact"},{"name":"mucopolysaccharidosis type 2B","type":"exact"},{"name":"mucopolysaccharidosis type II, attenuated form","type":"exact"},{"name":"mucopolysaccharidosis type IIB","type":"exact"}],"termid":"MONDO:0016316","xrefs":{"Monarch":{"xref_id":"0016316"}}}


id: GO:1901757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of butirosin.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"butirosin metabolic process","termid":"GO:1901756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butirosin catabolic process","synonyms":[{"name":"butirosin breakdown","type":"exact"},{"name":"butirosin catabolism","type":"exact"},{"name":"butirosin degradation","type":"exact"}],"termid":"GO:1901757"}


id: MOD:01961
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01785. Remap to MOD:01785.","definition_xrefs":["PubMed:17051152","PubMed:16618936","RESID:AA0536#THR","PubMed:18555071","PubMed:17687277"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01961 O-(L-isoglutamyl)-L-threonine (THR) (obsolete MOD:01961)","synonyms":[{"name":"(2S)-2-amino-5-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-5-oxopentanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-4-amino-4-carboxybutanoyl]oxy)-propanoic acid","type":"exact"},{"name":"5-(threon-O3-yl)glutamate","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)threonine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-threonine","type":"exact"},{"name":"O3-(isoglutamyl)threonine","type":"exact"}],"termid":"MOD:01961"}


id: GO:0006405
data:
  {"annotated_genes":["SJAG_03847","SJAG_02209","SJAG_04656","SJAG_02757","SJAG_00178","SJAG_04017","SJAG_01449","SJAG_00641","SJAG_04721","SJAG_04115","SJAG_03986","SJAG_01715","SJAG_03156","SJAG_03300","SJAG_02661","SJAG_04347","SJAG_00471","SJAG_04379","SJAG_03283","SJAG_04083","SJAG_01652","SJAG_04360","SJAG_02520","SJAG_04536","SJAG_03693","SJAG_00375","SJAG_04472","SJAG_01584","SJAG_04148","SJAG_04622","SJAG_00298","SJAG_05328","SJAG_02274","SJAG_02704","SJAG_03299","SJAG_01529","SJAG_01065","SJAG_04589","SJAG_04202","SJAG_04310","SJAG_01013","SJAG_00093","SJAG_02534","SJAG_01374","SJAG_04645","SJAG_01083","SJAG_03002","SJAG_00992","SJAG_01185","SJAG_04480","SJAG_03729"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76919,77371,81897,95854,98010,107002],"is_not":false,"summary":null,"term":"GO:0006405"},{"annotations":[91329,61639,74573,74489,82009,119274,103064,63228,75853,78469,79300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[74957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[116458,118316,117804,118056,75528,98426,74803,98840,76240,104569,82233,71648,94053,77467,103780,73150,113103,75913,112401,120039,76486,79116,105866,111830,113731,76144,103312,74956,120958,109586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[73929,107216,107690,80372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[81358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"},{"relation_name":"is_a","term_name":"nuclear export","termid":"GO:0051168"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"RNA export from nucleus","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA export from cell nucleus","type":"exact"},{"name":"RNA export out of nucleus","type":"exact"},{"name":"RNA transport from nucleus to cytoplasm","type":"exact"},{"name":"RNA-nucleus export","type":"exact"}],"termid":"GO:0006405","terms_by_termid":{"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0016973":null,"GO:0031990":null,"GO:0071528":null}}


id: PBO:0074402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 1","termid":"PBO:0074402"}


id: PBO:0114257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omega-amidase","termid":"PBO:0114257"}


id: PBO:0054383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1779","termid":"PBO:0054383"}


id: PBO:0084294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intracellular sporulation-specific glucoamylase; involved in glycogen degradation; induced during starvation of a/a diploids late in sporulation, but dispensable for sporulation","termid":"PBO:0084294"}


id: GO:0103045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine + acetyl-CoA = N-acetyl-L-methionine + coenzyme A + H+.","definition_xrefs":["RHEA:44144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid N-acetyltransferase activity","termid":"GO:0140085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"L-methionine N-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-6948"],"termid":"GO:0103045"}


id: PBO:0056036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent transforming growth factor beta binding protein 1","termid":"PBO:0056036"}


id: PBO:0079837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC5B antisense RNA 1","termid":"PBO:0079837"}


id: PBO:0076657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 19","termid":"PBO:0076657"}


id: PBO:0082854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of the signal recognition particle (SRP) complex; SRP complex functions in targeting nascent secretory proteins to the endoplasmic reticulum (ER) membrane; relocalizes from cytoplasm to the nuclear periphery upon DNA replication stress","termid":"PBO:0082854"}


id: GO:0072394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about a biological process or quality is received and converted into a molecular signal, contributing to a cell cycle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in cell cycle checkpoint (obsolete GO:0072394)","synonyms":[{"name":"G1/S transition checkpoint sensor mechanism","type":"related"},{"name":"G1/S transition checkpoint sensor process","type":"related"},{"name":"G2/M transition checkpoint sensor mechanism","type":"related"},{"name":"G2/M transition checkpoint sensor process","type":"related"},{"name":"cell cycle checkpoint sensor mechanism","type":"related"},{"name":"cell cycle checkpoint sensor process","type":"related"},{"name":"detection of stimulus involved in G1/S transition checkpoint","type":"related"},{"name":"detection of stimulus involved in G2/M transition checkpoint","type":"related"},{"name":"sensing involved in G1/S transition checkpoint","type":"related"},{"name":"sensing involved in G2/M transition checkpoint","type":"related"},{"name":"sensing involved in cell cycle checkpoint","type":"related"}],"termid":"GO:0072394"}


id: PBO:0088020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tyrosyl-DNA phosphodiesterase I; hydrolyzes 3' and 5'-phosphotyrosyl bonds; involved in the repair of DNA lesions created by topo I and topo II; mutations in the human homolog, TDP1, result in the a neurodegenerative disease, spinocerebellar ataxia with axonal neuropathy (SCAN1); yeast cells and human rhabdomyosarcoma lines that overexpress TDP1 both exhibit elevated dosage chromosomal instability (dCIN)","termid":"PBO:0088020"}


id: PBO:0070318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 7","termid":"PBO:0070318"}


id: PBO:0074294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcolipin","termid":"PBO:0074294"}


id: PR:O75011
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CaM kinase-like vesicle-associated protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03293","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase nak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17F3.02","secondary_identifiers":["UniProtKB:O75011"],"synonyms":[{"name":"N-rich kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CAMKV","type":"exact"}],"termid":"PR:O75011"}


id: GO:0120115
data:
  {"annotated_genes":["SJAG_03460","SJAG_03954","SJAG_01327","SJAG_05240","SJAG_03070","SJAG_02469","SJAG_01819"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97695,108286,110489,114865,116931,117865,118400],"is_not":false,"summary":null,"term":"GO:0120115"}]},"cv_name":"cellular_component","definition":"A heteroheptameric, nuclear protein complex composed of Lsm2, Lsm3, Lsm4, Lsm5, Lsm6, Lsm7, and Lsm8, or orthologs thereof, that selectively binds to snRNAs, in particular U6 or U6atac snRNAs, and also to unspliced transcripts localized within the nucleus.","definition_xrefs":["PMID:19121818","GOC:bhm","GOC:krc","PMID:23221597","PMID:27627834","PMID:28768202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Lsm2-8 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120115","terms_by_termid":{"GO:0120115":null}}


id: MONDO:1012678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome that occurs in pigs due to a mutation in the MITF gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome, non-human animal","termid":"MONDO:1011447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, MITF-related, pig","secondary_identifiers":["OMIA:001401-9823"],"synonyms":[{"name":"Waardenburg syndrome, type 2A, pig","type":"related"}],"termid":"MONDO:1012678","xrefs":{"Monarch":{"xref_id":"1012678"}}}


id: PR:000050527
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the hhf2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.03c","termid":"PR:000050527"}


id: PBO:0048862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 7","termid":"PBO:0048862"}


id: MONDO:1011836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, non-human animal","secondary_identifiers":["OMIA:000177"],"termid":"MONDO:1011836","xrefs":{"Monarch":{"xref_id":"1011836"}}}


id: PBO:0091227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane fluoride export channel Fex1","termid":"PBO:0091227"}


id: PBO:0057680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1269b","termid":"PBO:0057680"}


id: GO:0086046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which SA node cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"SA node cell action potential","termid":"GO:0086015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during SA node cell action potential","synonyms":[{"name":"membrane depolarization involved in regulation of SA node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of SAN cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0086046"}


id: GO:0098985
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuron to neuron synapse with a postsynaptic density, that uses glutamate as a neurotransmitter and whose activity results in excitatory postsynaptic potentials.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric synapse","termid":"GO:0032279"},{"relation_name":"is_a","term_name":"excitatory synapse","termid":"GO:0060076"},{"relation_name":"is_a","term_name":"glutamatergic synapse","termid":"GO:0098978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}


id: PBO:0058236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4524b","termid":"PBO:0058236"}


id: PBO:0083847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp41p (EXOSC4)","termid":"PBO:0083847"}


id: PBO:0003132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC50 domain protein, implicated in signal transduction (predicted)","termid":"PBO:0003132"}


id: MONDO:0009655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive lysosomal storage disease caused by deficiency of the enzyme heparan sulfate sulfatase. It is characterized by behavioral changes, sleep disturbances, mental developmental delays and seizures.","definition_xrefs":["NCIT:C84897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 3","termid":"MONDO:0018937"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0037792"],"is_obsolete":false,"name":"mucopolysaccharidosis type 3A","secondary_identifiers":["GARD:7071","DOID:0111395","NANDO:1200101","NANDO:2201174","Orphanet:79269","SCTID:41572006","MEDGEN:39264","icd11.foundation:182200345","OMIM:252900","UMLS:C0086647"],"synonyms":[{"name":"MPS 3A","type":"related"},{"name":"MPS III A","type":"exact"},{"name":"MPS IIIA","type":"related"},{"name":"MPS3A","type":"exact"},{"name":"MPSIIIA","type":"exact"},{"name":"Sanfilippo A","type":"exact"},{"name":"Sanfilippo syndrome a","type":"exact"},{"name":"Sanfilippo syndrome type A","type":"exact"},{"name":"heparan sulfamidase deficiency","type":"exact"},{"name":"heparan sulfate sulfatase deficiency","type":"related"},{"name":"heparan sulphate sulfatase deficiency","type":"related"},{"name":"heparane sulfamidase deficiency","type":"related"},{"name":"mucopoly-saccharidosis type 3A","type":"related"},{"name":"mucopolysaccharidosis type 3A","type":"exact"},{"name":"mucopolysaccharidosis type IIIA","type":"exact"},{"name":"mucopolysaccharidosis type IIIA (Sanfilippo A)","type":"exact"},{"name":"mucopolysaccharidosis, type 3A","type":"related"},{"name":"mucopolysaccharidosis, type IIIA","type":"related"},{"name":"sulfamidase deficiency","type":"related"}],"termid":"MONDO:0009655","xrefs":{"Monarch":{"xref_id":"0009655"}}}


id: PBO:0046353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 11","termid":"PBO:0046353"}


id: GO:0060748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The branching process in which the mammary gland ducts form tertiary branches off of the secondary branches as part of diestrus and pregnancy.","definition_xrefs":["GOC:dph","PMID:18614704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"mammary gland branching involved in pregnancy","termid":"GO:0060745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tertiary branching involved in mammary gland duct morphogenesis","termid":"GO:0060748"}


id: FYPO:0001667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell during glucose starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cAMP level","termid":"FYPO:0001666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cAMP level during glucose starvation","synonyms":[{"name":"normal cAMP accumulation during glucose starvation","type":"related"},{"name":"normal cAMP level during glucose depletion","type":"exact"},{"name":"normal cAMP level during glucose deprivation","type":"exact"},{"name":"normal cAMP level during glucose limitation","type":"related"},{"name":"normal cellular cAMP level during glucose starvation","type":"exact"},{"name":"normal cyclic AMP level during glucose starvation","type":"exact"}],"termid":"FYPO:0001667"}


id: PR:O14344
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inosine-5'-monophosphate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-5'-monophosphate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.14c","secondary_identifiers":["UniProtKB:O14344"],"synonyms":[{"name":"IMP dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMPD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMPDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC2F12.14c","type":"related"},{"name":"Spom972h-guaB","type":"exact"}],"termid":"PR:O14344"}


id: PBO:0054850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2264","termid":"PBO:0054850"}


id: PBO:0049859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2","termid":"PBO:0049859"}


id: PR:O74135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cki3 gene.","definition_xrefs":["UniProtKB:O74135","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.05","synonyms":[{"name":"Spom972h-cki3","type":"exact"}],"termid":"PR:O74135"}


id: MONDO:0005525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant disease of the T-lymphocytes in the bone marrow, thymus, and/or blood.","definition_xrefs":["MESH:D015458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"lymphoid leukemia","termid":"MONDO:0005402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"T-cell leukemia","secondary_identifiers":["NCIT:C8694","UMLS:C0023492","DOID:715","EFO:0005592","MEDGEN:6064"],"synonyms":[{"name":"T cell leukaemia (disease)","type":"exact"},{"name":"T cell leukemia (disease)","type":"exact"},{"name":"leukaemia (disease) of T cell","type":"exact"},{"name":"leukemia (disease) of T cell","type":"exact"}],"termid":"MONDO:0005525","xrefs":{"Monarch":{"xref_id":"0005525"}}}


id: FYPO:0004328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular protein localization is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization during mitosis","synonyms":[{"name":"normal cellular protein localization during mitosis","type":"exact"},{"name":"normal protein localisation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein localization during mitotic M phase","type":"related"},{"name":"normal protein localization during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004328"}


id: FYPO:0007506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more specific promoter elements is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin at promoter","synonyms":[{"name":"increased protein localisation to chromatin at promoter","type":"exact"},{"name":"increased protein localization to chromatin at promoter during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0007506"}


id: PBO:0080123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAMP1 antisense RNA 1","termid":"PBO:0080123"}


id: PBO:0074937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 103B","termid":"PBO:0074937"}


id: MONDO:0011248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 13q is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the long arm of chromosome 13, with a highly variable phenotype typically characterized by varying degrees of intellectual disability and developmental delay, as well as CNS malformations (e.g. holoprosencephaly, anencephaly, ventriculomegaly, Dandy-Walker malformation), ocular abnormalities (e.g. hypertelorism, microphthalmia, strabismus, aniridia, retinal dysplasia) and craniofacial dysmorphism (microcephaly, trigonocephaly, large and malformed ears, broad prominent nasal bridge, micrognathia). Cardiac, genitourinary, gastrointestinal and skeletal manifestations have also been reported.","definition_xrefs":["Orphanet:1590"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 13","termid":"MONDO:0016911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 13q","secondary_identifiers":["SCTID:763527007","UMLS:C1865208","MEDGEN:355405","MESH:C566526","GARD:16571","OMIM:602553"],"synonyms":[{"name":"13q32 deletion","type":"exact"},{"name":"anal atresia, hypospadias, and penoscrotal inversion","type":"related"},{"name":"deletion 13q32","type":"exact"},{"name":"distal 13q deletion","type":"exact"},{"name":"distal monosomy type 13q","type":"exact"},{"name":"monosomy 13q32","type":"exact"},{"name":"telomeric deletion13q","type":"exact"}],"termid":"MONDO:0011248","xrefs":{"Monarch":{"xref_id":"0011248"}}}


id: GO:0007403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a glial cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"glial cell fate commitment","termid":"GO:0021781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell fate determination","secondary_identifiers":["GO:0043361"],"termid":"GO:0007403"}


id: PBO:0081450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 317 pseudogene 1","termid":"PBO:0081450"}


id: PBO:0052431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klotho","termid":"PBO:0052431"}


id: PBO:0087417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 7 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; oriented facing the mitochondrial matrix; N-terminus appears to play a role in complex assembly","termid":"PBO:0087417"}


id: MONDO:1011354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reproductive system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354","xrefs":{"Monarch":{"xref_id":"1011354"}}}


id: GO:0075155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont transmembrane receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transmembrane receptor-mediated signal transduction in response to host (obsolete GO:0075155)","synonyms":[{"name":"negative regulation of symbiont transmembrane receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075155"}


id: MONDO:0003207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eccrine adenocarcinoma (obsolete MONDO:0003207)","termid":"MONDO:0003207","xrefs":{"Monarch":{"xref_id":"0003207"}}}


id: PBO:0065682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin synthase","termid":"PBO:0065682"}


id: PBO:0031129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-genome_stability_defects_(obsolete_FYPO:0000241)","termid":"PBO:0031129"}


id: MONDO:0004794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconjunctivitis","termid":"MONDO:0004768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"exposure keratitis","secondary_identifiers":["MEDGEN:87383","UMLS:C0339295","DOID:9461","icd11.foundation:1261495652","SCTID:14366000","ICD9:370.34"],"synonyms":[{"name":"exposure keratoconjunctivitis","type":"exact"},{"name":"lagophthalmic keratitis","type":"exact"}],"termid":"MONDO:0004794","xrefs":{"Monarch":{"xref_id":"0004794"}}}


id: GO:0106027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a neuron, e.g. an axon, or a dendrite.","definition_xrefs":["GOC:aruk","PMID:11585923","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection organization","termid":"GO:0106027"}


id: FYPO:0003740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) occurs to a lower extent than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PomBase:mah","GO:0034080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased CENP-A containing chromatin assembly","synonyms":[{"name":"decreased CENP-A containing nucleosome assembly","type":"related"},{"name":"decreased CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"decreased CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"decreased CENP-A deposition","type":"related"},{"name":"decreased CENP-A loading","type":"related"},{"name":"decreased CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"decreased DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"decreased centromere-specific histone exchange","type":"exact"},{"name":"decreased centromere-specific nucleosome assembly","type":"exact"},{"name":"decreased centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"reduced CENP-A containing nucleosome assembly","type":"exact"}],"termid":"FYPO:0003740"}


id: GO:1905046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:22393241","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of Schwann cell proliferation","termid":"GO:0010625"},{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"},{"relation_name":"positively_regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell proliferation involved in axon regeneration","synonyms":[{"name":"activation of Schwann cell proliferation involved in axon regeneration","type":"narrow"},{"name":"up regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"up-regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"upregulation of Schwann cell proliferation involved in axon regeneration","type":"exact"}],"termid":"GO:1905046"}


id: PBO:0080374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 4 homolog A","termid":"PBO:0080374"}


id: PBO:0048926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin B1","termid":"PBO:0048926"}


id: PBO:0050425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H2","termid":"PBO:0050425"}


id: MONDO:1010421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narcolepsy that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, non-human animal","termid":"MONDO:1010003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy, sheep","secondary_identifiers":["OMIA:000703-9940"],"termid":"MONDO:1010421","xrefs":{"Monarch":{"xref_id":"1010421"}}}


id: PBO:0082599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin coat accessory factor; involved in clathrin-mediated vesicle trafficking; may function to link the AP-1 clathrin adaptor complex with the Rab GTPase Ypt31p; has structural similarity to G-proteins; mouse homolog Aagab (p34) functionally complements irc6 null mutation; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0082599"}


id: MONDO:0016826
data:
  {"annotated_genes":["SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"}]},"cv_name":"mondo","definition":"An inborn error of vitamin B12 (cobalamin) metabolism characterized by megaloblastic anemia, lethargy, failure to thrive, developmental delay, intellectual deficit and seizures. There are four complementation classes of cobalamin defects (cblC, cblD, cblF and cblJ) that are responsible for methylmalonic acidemia - homocystinuria (methylmalonic acidemia - homocystinuria cblC, cblD cblF and cblJ).","definition_xrefs":["Orphanet:26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"homocystinuria","termid":"MONDO:0004737"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"methylmalonic aciduria and homocystinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1864102","OMIMPS:277400","GARD:3579","UMLS:C5848324","MESH:C537359"],"synonyms":[{"name":"combined defect in adenosylcobalamin and methylcobalamin synthesis","type":"exact"},{"name":"methylmalonic acidemia and homocystinemia","type":"related"},{"name":"methylmalonic aciduria with homocystinuria","type":"exact"}],"termid":"MONDO:0016826","terms_by_termid":{"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0016826"}}}


id: PBO:0064762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase E like pseudogene","termid":"PBO:0064762"}


id: GO:0052922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 isopentenyl diphosphate + (2E,6E,10E)-geranylgeranyl diphosphate = all-trans-hexaprenyl diphosphate + 2 diphosphate.","definition_xrefs":["RHEA:27555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"hexaprenyl diphosphate synthase (geranylgeranyl-diphosphate specific) activity","secondary_identifiers":["KEGG_REACTION:R09246","MetaCyc:RXN-11485","EC:2.5.1.82"],"synonyms":[{"name":"(all-E) hexaprenyl diphosphate synthase activity","type":"broad"},{"name":"(all-trans)-hexaprenyl-diphosphate synthase activity","type":"broad"},{"name":"hexaprenyl diphosphate synthase activity","type":"broad"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"broad"}],"termid":"GO:0052922"}


id: PBO:0087435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit D of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; plays a role in the coupling of proton transport and ATP hydrolysis; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087435"}


id: GO:0009345
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric enzyme complex which, in bacteria, is usually a tetramer of two alpha and two beta chains and in eukaryotes, is usually a homodimer. Functions in the ligation of glycine and tRNA(Gly) to form glycyl-tRNA(Gly).","definition_xrefs":["PMID:15733854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"glycine-tRNA ligase complex","synonyms":[{"name":"glycine-tRNA synthetase complex","type":"exact"}],"termid":"GO:0009345"}


id: MONDO:0018910
data:
  {"annotated_genes":["SJAG_00115","SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011683"},{"annotations":[86981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014070"}]},"cv_name":"mondo","definition":"Oculocutaneous albinism (OCA) describes a group of inherited disorders of melanin biosynthesis characterized by a generalized reduction in pigmentation of hair, skin and eyes and variable ocular findings including nystagmus, reduced visual acuity and photophobia. Variants include OCA1A (the most severe form), OCA1B, OCA1-minimal pigment (OCA1-MP), OCA1-temperature sensitive (OCA1-TS), OCA2, OCA3, OCA4, OCA5, OCA6 and OCA7.","definition_xrefs":["Orphanet:55"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of melanin metabolism","termid":"MONDO:0018134"},{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"oculocutaneous albinism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200986","GARD:10958","ICD9:270.2","MEDGEN:36250","DOID:0050632","MESH:D016115","icd11.foundation:1189424097","NCIT:C84941","NORD:1522","NANDO:1200637","OMIMPS:203100","NANDO:1200641","SCTID:63844009","UMLS:C0078918"],"synonyms":[{"name":"OCA","type":"exact"},{"name":"albinism, oculocutaneous","type":"related"},{"name":"non-syndromic oculocutaneous albinism","type":"exact"},{"name":"nonsyndromic oculocutaneous albinism","type":"exact"}],"termid":"MONDO:0018910","terms_by_termid":{"MONDO:0011683":null,"MONDO:0014070":null},"xrefs":{"Monarch":{"xref_id":"0018910"}}}


id: PBO:0012059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain","termid":"PBO:0012059"}


id: PBO:0052372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF18B divergent transcript","termid":"PBO:0052372"}


id: PBO:0051614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 36 receptor antagonist","termid":"PBO:0051614"}


id: PBO:0073232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 5","termid":"PBO:0073232"}


id: GO:0060811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mRNA is transported to, or maintained in, a specific location within the oocyte and/or syncytial embryo that contributes to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in pattern specification process","termid":"GO:0060810"},{"relation_name":"part_of","term_name":"anterior/posterior axis specification","termid":"GO:0009948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"intracellular mRNA localization involved in anterior/posterior axis specification","synonyms":[{"name":"intracellular mRNA localisation involved in anterior/posterior axis specification","type":"exact"}],"termid":"GO:0060811"}


id: FYPO:0003688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleolus","termid":"FYPO:0003687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleolus","synonyms":[{"name":"abolished protein localisation to nucleolus","type":"exact"},{"name":"abolished protein localization in nucleolus","type":"exact"},{"name":"abolished protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleolus during vegetative growth","type":"exact"},{"name":"protein localization to nucleolus abolished","type":"exact"}],"termid":"FYPO:0003688"}


id: MONDO:0016411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypothyroidism due to mutations in transcription factors involved in pituitary development or function is a type of central congenital hypothyroidism, a permanent thyroid deficiency that is present from birth, characterized by low levels of thyroid hormones caused by disorders in the development or function of the pituitary.","definition_xrefs":["Orphanet:226307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central congenital hypothyroidism","termid":"MONDO:0016410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothyroidism due to deficient transcription factors involved in pituitary development or function","secondary_identifiers":["MEDGEN:900830","GARD:20562","UMLS:C4273672"],"termid":"MONDO:0016411","xrefs":{"Monarch":{"xref_id":"0016411"}}}


id: GO:0050803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structure or activity","termid":"GO:0050803"}


id: GO:0110003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tRNA C5-cytosine methylation.","definition_xrefs":["GOC:vw","PMID:23074192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA methylation","termid":"GO:0110002"},{"relation_name":"regulates","term_name":"tRNA C5-cytosine methylation","termid":"GO:0002946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"regulation of tRNA C5-cytosine methylation","termid":"GO:0110003"}


id: SO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A secondary structure variant that compensate for the change made by a previous variant.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_secondary_structure_variant","termid":"SO:0001596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compensatory_transcript_secondary_structure_variant","synonyms":[{"name":"compensatory transcript secondary structure variant","type":"exact"}],"termid":"SO:0001597"}


id: GO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper 1 cell, a CD4-positive, alpha-beta T cell specialized to promote immunological processes often associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell lineage commitment","termid":"GO:0002295"},{"relation_name":"part_of","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell lineage commitment","synonyms":[{"name":"T-helper 1 cell fate commitment","type":"exact"},{"name":"Th1 cell lineage commitment","type":"exact"},{"name":"Th1 fate commitment","type":"exact"}],"termid":"GO:0002296"}


id: GO:0120182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of disaggregation of a focal adhesion into its constituent components.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate junction organization","termid":"GO:0150116"},{"relation_name":"regulates","term_name":"focal adhesion disassembly","termid":"GO:0120181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of focal adhesion disassembly","termid":"GO:0120182"}


id: PBO:0045172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 6","termid":"PBO:0045172"}


id: GO:0090506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process that results in the initiation of an axillary shoot meristem. An axillary shoot meristem is a shoot meristem formed in the axil of a leaf.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem initiation","termid":"GO:0010014"},{"relation_name":"part_of","term_name":"secondary shoot formation","termid":"GO:0010223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axillary shoot meristem initiation","synonyms":[{"name":"axillary bud meristem initiation","type":"related"}],"termid":"GO:0090506"}


id: GO:0035198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.","definition_xrefs":["PMID:15066283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory RNA binding","termid":"GO:0061980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"miRNA binding","synonyms":[{"name":"microRNA binding","type":"exact"}],"termid":"GO:0035198"}


id: GO:0015196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-tryptophan from one side of a membrane to the other. Tryptophan is 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-tryptophan transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-8870352","GO:0005299"],"synonyms":[{"name":"L-tryptophan permease activity","type":"exact"},{"name":"L-tryptophan transporter activity","type":"broad"},{"name":"valine/tyrosine/tryptophan permease activity","type":"narrow"}],"termid":"GO:0015196"}


id: MONDO:0850107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postinfectious cerebellitis","secondary_identifiers":["UMLS:C5575321","GARD:22502","MEDGEN:1843009","Orphanet:624244"],"termid":"MONDO:0850107","xrefs":{"Monarch":{"xref_id":"0850107"}}}


id: PATO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's coinciding spatially, partially or wholly with another entity.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlap with","synonyms":[{"name":"overlap","type":"exact"}],"termid":"PATO:0001590"}


id: PBO:0067575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 732, pseudogene","termid":"PBO:0067575"}


id: PBO:0052370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 18A","termid":"PBO:0052370"}


id: PBO:0031762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_in_mitotic_G1_phase","termid":"PBO:0031762"}


id: MONDO:0001125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of gonococcal epididymo-orchitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"gonococcal epididymo-orchitis","termid":"MONDO:0021158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute gonococcal epididymo-orchitis","secondary_identifiers":["SCTID:30168008","UMLS:C0153193","DOID:10802","ICD9:098.13","MEDGEN:509195"],"synonyms":[{"name":"gonococcal epididymo-orchitis (acute)","type":"exact"},{"name":"gonococcal epididymo-orchitis, acute","type":"exact"}],"termid":"MONDO:0001125","xrefs":{"Monarch":{"xref_id":"0001125"}}}


id: PBO:0046113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1","termid":"PBO:0046113"}


id: GO:0070396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipoteichoic acid, which is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.","definition_xrefs":["GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid catabolic process","termid":"GO:0070393"},{"relation_name":"is_a","term_name":"lipoteichoic acid metabolic process","termid":"GO:0070394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoteichoic acid catabolic process","synonyms":[{"name":"lipoteichoic acid breakdown","type":"exact"},{"name":"lipoteichoic acid catabolism","type":"exact"},{"name":"lipoteichoic acid degradation","type":"exact"}],"termid":"GO:0070396"}


id: PBO:0000531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor complex subunit Res2","termid":"PBO:0000531"}


id: MONDO:0008458
data:
  {"annotated_genes":["SJAG_01317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89098],"is_not":false,"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","definition":"A subtype of type I autosomal dominant cerebellar ataxia (ADCA type I) characterized by truncal ataxia, dysarthria, slowed saccades and less commonly ophthalmoparesis and chorea.","definition_xrefs":["Orphanet:98756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060204","GARD:4072","DOID:0050955","MEDGEN:155704","NANDO:1200046","NCIT:C148315","UMLS:C0752121","OMIM:183090","SCTID:715751004","icd11.foundation:1232187870"],"synonyms":[{"name":"ALS13","type":"related"},{"name":"ATXN2 autosomal dominant cerebellar ataxia type I","type":"exact"},{"name":"OPCA2","type":"exact"},{"name":"SCA 2","type":"related"},{"name":"SCA2","type":"exact"},{"name":"Wadia swami syndrome","type":"related"},{"name":"Wadia-swami syndrome","type":"related"},{"name":"amyotrophic lateral sclerosis 13","type":"related"},{"name":"amyotrophic lateral sclerosis type 13","type":"related"},{"name":"amyotrophic lateral sclerosis, susceptibility to, 13","type":"related"},{"name":"autosomal dominant cerebellar ataxia type I caused by mutation in ATXN2","type":"exact"},{"name":"cerebellar Degeneration with slow eye movements","type":"related"},{"name":"olivopontocerebellar atrophy 2","type":"related"},{"name":"olivopontocerebellar atrophy Holguin type","type":"related"},{"name":"olivopontocerebellar atrophy, Holguin type","type":"related"},{"name":"spinocerebellar Degeneration with slow eye movements","type":"related"},{"name":"spinocerebellar ataxia 2","type":"related"},{"name":"spinocerebellar ataxia Cuban type","type":"related"},{"name":"spinocerebellar ataxia type 2","type":"exact"},{"name":"spinocerebellar ataxia with slow eye movements","type":"related"},{"name":"spinocerebellar ataxia, Cuban type","type":"related"},{"name":"spinocerebellar atrophy 2","type":"related"}],"termid":"MONDO:0008458","terms_by_termid":{"MONDO:0008458":null},"xrefs":{"Monarch":{"xref_id":"0008458"}}}


id: GO:0045568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 2.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of TRAIL receptor 2 biosynthetic process (obsolete GO:0045568)","synonyms":[{"name":"activation of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"positive regulation of TRAIL receptor 2 anabolism","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 formation","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 synthesis","type":"exact"},{"name":"stimulation of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"up regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"up-regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"upregulation of TRAIL receptor 2 biosynthetic process","type":"exact"}],"termid":"GO:0045568"}


id: GO:0003026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by sensing the amount of stretch occurring in the aorta and responding to the input via central nervous system control.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by aortic arch baroreceptor feedback","synonyms":[{"name":"aortic arch baroreceptor control of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0003026"}


id: FYPO:0003902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of etoposide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to etoposide","synonyms":[{"name":"resistance to etoposide during mitotic cell cycle","type":"related"},{"name":"resistance to etoposide during vegetative growth","type":"exact"},{"name":"resistant to etoposide","type":"exact"}],"termid":"FYPO:0003902"}


id: GO:0007485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the male genitalia over time, from formation as part of the genital disc to the mature structure. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived genitalia development","termid":"GO:0007484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived male genitalia development","synonyms":[{"name":"male genital development","type":"broad"}],"termid":"GO:0007485"}


id: PBO:0057606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-3","termid":"PBO:0057606"}


id: PBO:0061337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B15","termid":"PBO:0061337"}


id: GO:1902011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(ribitol phosphate) teichoic acid.","definition_xrefs":["GOC:TermGenie","PMID:11882717","UniPathway:UPA00790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(ribitol phosphate) teichoic acid metabolic process","synonyms":[{"name":"poly(ribitol phosphate) teichoic acid metabolism","type":"exact"}],"termid":"GO:1902011"}


id: MONDO:0006897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic nonsuppurative inflammation of periapical tissue resulting from irritation following pulp disease or endodontic treatment.","definition_xrefs":["MESH:D010484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periapical periodontitis","termid":"MONDO:0004508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periapical granuloma","secondary_identifiers":["MEDGEN:45395","SCTID:81407003","EFO:1001096","DOID:4617","MedDRA:10060985","UMLS:C0031029"],"synonyms":[{"name":"apical granuloma","type":"exact"},{"name":"periapical granuloma","type":"exact"}],"termid":"MONDO:0006897","xrefs":{"Monarch":{"xref_id":"0006897"}}}


id: GO:2000327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ligand-dependent nuclear receptor transcription coactivator activity.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nuclear receptor transcription coactivator activity (obsolete GO:2000327)","synonyms":[{"name":"positive regulation of ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"positive regulation of ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"}],"termid":"GO:2000327"}


id: MONDO:0800355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sleep disorder","termid":"MONDO:0100081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasomnia, sleep terrors type","secondary_identifiers":["UMLS:C3151364","MEDGEN:462714"],"synonyms":[{"name":"PSMNST","type":"exact"}],"termid":"MONDO:0800355","xrefs":{"Monarch":{"xref_id":"0800355"}}}


id: GO:0038018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a Wnt receptor. Internalized Wnt receptors can be recycled to the plasma membrane or sorted to lysosomes for protein degradation.","definition_xrefs":["GOC:signaling","GOC:rl","PMID:19643732","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor catabolic process","termid":"GO:0032801"},{"relation_name":"part_of","term_name":"negative regulation of Wnt signaling pathway","termid":"GO:0030178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Wnt receptor catabolic process","synonyms":[{"name":"Frizzled degradation","type":"narrow"},{"name":"Wnt receptor breakdown","type":"exact"},{"name":"Wnt receptor catabolism","type":"exact"},{"name":"Wnt receptor degradation","type":"related"},{"name":"negative regulation of Wnt receptor signaling pathway by Wnt receptor degradation","type":"exact"}],"termid":"GO:0038018"}


id: PBO:0053136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain binding 3","termid":"PBO:0053136"}


id: GO:1904953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any Wnt signaling pathway that is involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:21347250","PMID:22988876","GOC:bf","GOC:PARL","PMID:23517308"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation (obsolete GO:1904953)","synonyms":[{"name":"Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1904953"}


id: PBO:0059820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin","termid":"PBO:0059820"}


id: PR:P0CT56
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.05c","synonyms":[{"name":"Spom972h-rps1401","type":"exact"}],"termid":"PR:P0CT56"}


id: PR:O14193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug69 gene.","definition_xrefs":["UniProtKB:O14193","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 69 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.05","synonyms":[{"name":"Spom972h-mug69","type":"exact"}],"termid":"PR:O14193"}


id: MONDO:0005871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by nematode larvae which never develop into the adult stage and migrate through various body tissues. They commonly infect the skin, eyes, and viscera in humans. Ancylostoma brasiliensis causes cutaneous larva migrans. Toxocara causes visceral larva migrans.","definition_xrefs":["MESH:D007815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nematoda infectious disease","secondary_identifiers":["MONDO:0021556","MESH:D009349","MEDGEN:45025","SCTID:84706005","UMLS:C0027583","EFO:0007391"],"synonyms":[{"name":"Disease due to Nematoda","type":"related"},{"name":"Infection, Nematode","type":"related"},{"name":"Infections, Nematode","type":"related"},{"name":"Nematoda caused disease or disorder","type":"exact"},{"name":"Nematoda disease or disorder","type":"exact"},{"name":"Nematode Infection","type":"related"},{"name":"Nematode Infections","type":"related"},{"name":"Nematode infection","type":"related"},{"name":"Nematodiasis","type":"related"},{"name":"disease due to nematoda","type":"exact"},{"name":"nematode infection","type":"related"},{"name":"nematodiasis","type":"related"}],"termid":"MONDO:0005871","xrefs":{"Monarch":{"xref_id":"0005871"}}}


id: PBO:0027655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation_during_mitotic_G2_phase","termid":"PBO:0027655"}


id: PBO:0082041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2Fe-2S cytosolic protein of unknown function; bishistidinyl coordinated, non-Rieske [2Fe-2S] cluster containing thiredoxin-like ferredoxin; required for normal localization of actin patches and for normal tolerance of sodium ions and hydrogen peroxide; green fluorescent protein (GFP)-fusion protein localizes to both the nucleus and the cytoplasm; homologous to AIM32","termid":"PBO:0082041"}


id: PBO:0079744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 11","termid":"PBO:0079744"}


id: PBO:0073032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scratch family transcriptional repressor 2","termid":"PBO:0073032"}


id: GO:0006979
data:
  {"annotated_genes":["SJAG_00141","SJAG_06621","SJAG_04953","SJAG_02495","SJAG_01855","SJAG_02858","SJAG_04036","SJAG_02135","SJAG_03330","SJAG_06622","SJAG_02573","SJAG_03896","SJAG_04125","SJAG_00419","SJAG_02044","SJAG_04311","SJAG_05014","SJAG_04823","SJAG_00984","SJAG_03414","SJAG_04399","SJAG_01734","SJAG_05181","SJAG_03303","SJAG_00668","SJAG_02183","SJAG_01216","SJAG_04632","SJAG_00365","SJAG_03166","SJAG_03886","SJAG_03828","SJAG_04788","SJAG_03653","SJAG_00996","SJAG_02515","SJAG_04403","SJAG_02945","SJAG_02485","SJAG_01199","SJAG_01084","SJAG_03903","SJAG_02249","SJAG_01292","SJAG_01162","SJAG_02433","SJAG_03924","SJAG_00027","SJAG_02592","SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97078,101904,110801,119379,106985,120320],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[92036,72003,78814,110901,76989,110899,110900,75349,97870,77639,110902,95423,110904,68475,75051,109757,69844,79349,110898,116466,91935,65149,90397,94017,78608,80900,61053,92736,99517,103774,76624,110903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034599"},{"annotations":[91645,92038,93380],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:2000815"},{"annotations":[58381,70437,66221,94998,101171,61559,90821,75990,91246],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"},{"annotations":[97141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000302"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["PMID:12115731","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02249":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03886":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04125":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05014":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxidative stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0006979","terms_by_termid":{"GO:0000302":null,"GO:0019430":null,"GO:0034599":null,"GO:0061692":null,"GO:2000815":null}}


id: MONDO:0020792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism with tall vertebrae","secondary_identifiers":["MEDGEN:338839","MESH:C535725","UMLS:C1851996","OMIM:126950"],"termid":"MONDO:0020792","xrefs":{"Monarch":{"xref_id":"0020792"}}}


id: PBO:0060558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin pseudogene 2","termid":"PBO:0060558"}


id: FYPO:0005214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to osmotic stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:26493332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of translation in response to stress during vegetative growth","termid":"FYPO:0005213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal regulation of translation in response to osmotic stress","synonyms":[{"name":"normal regulation of translation in response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal regulation of translation in response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0005214"}


id: GO:0072340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactam catabolic process","synonyms":[{"name":"cellular lactam breakdown","type":"exact"},{"name":"cellular lactam catabolic process","type":"exact"},{"name":"cellular lactam catabolism","type":"exact"},{"name":"cellular lactam degradation","type":"exact"}],"termid":"GO:0072340"}


id: MONDO:0015764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 20 is a rare chromosomal anomaly syndrome with a highly variable phenotype ranging from normal (in the majority of cases) to a mild, subtle phenotype principally characterized by spinal abnormalities (i.e. stenosis, vertebral fusion, and kyphosis), hypotonia, lifelong constipation, sloped shoulders, skin pigmentation abnormalities (i.e. linear and whorled nevoid hypermelanosis) and significant learning disabilities despite normal intelligence. More severe phenotypes, with patients presenting psychomotor and speech delay, mild facial dysmorphism, cardiac (i.e. ventricular septal defect, dysplastic tricuspid mitral valve) and renal anomalies (e.g. horseshoe kidneys), have also been reported.","definition_xrefs":["Orphanet:1724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 20 trisomy","termid":"MONDO:0022757"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 20","secondary_identifiers":["GARD:18744"],"synonyms":[{"name":"Mosaic trisomy chromosome 20","type":"exact"},{"name":"Mosaic trisomy type 20","type":"exact"}],"termid":"MONDO:0015764","xrefs":{"Monarch":{"xref_id":"0015764"}}}


id: PR:O94600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TELO2-interacting protein 1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEL2-interacting protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.13c","secondary_identifiers":["UniProtKB:O94600"],"synonyms":[{"name":"Spom972h-TTI1","type":"exact"}],"termid":"PR:O94600"}


id: PBO:0078660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 13-1","termid":"PBO:0078660"}


id: GO:0008036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a diuretic hormone and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"diuretic hormone receptor activity","termid":"GO:0008036"}


id: GO:1903060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein lipidation.","definition_xrefs":["PMID:21909394","GO_REF:0000058","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein metabolic process","termid":"GO:0050748"},{"relation_name":"is_a","term_name":"regulation of protein lipidation","termid":"GO:1903059"},{"relation_name":"negatively_regulates","term_name":"protein lipidation","termid":"GO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein lipidation","synonyms":[{"name":"down regulation of lipid:protein modification","type":"exact"},{"name":"down regulation of protein amino acid lipidation","type":"exact"},{"name":"down regulation of protein lipidation","type":"exact"},{"name":"down-regulation of lipid:protein modification","type":"exact"},{"name":"down-regulation of protein amino acid lipidation","type":"exact"},{"name":"down-regulation of protein lipidation","type":"exact"},{"name":"downregulation of lipid:protein modification","type":"exact"},{"name":"downregulation of protein amino acid lipidation","type":"exact"},{"name":"downregulation of protein lipidation","type":"exact"},{"name":"inhibition of lipid:protein modification","type":"narrow"},{"name":"inhibition of protein amino acid lipidation","type":"narrow"},{"name":"inhibition of protein lipidation","type":"narrow"},{"name":"negative regulation of lipid:protein modification","type":"exact"},{"name":"negative regulation of protein amino acid lipidation","type":"exact"}],"termid":"GO:1903060"}


id: PBO:0029262
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ammonium","termid":"PBO:0029262"}


id: GO:0009118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleoside metabolic process","synonyms":[{"name":"regulation of nucleoside metabolism","type":"exact"}],"termid":"GO:0009118"}


id: GO:0032790
data:
  {"annotated_genes":["SJAG_01497","SJAG_03106","SJAG_03189","SJAG_00898","SJAG_00188","SJAG_02746","SJAG_02096","SJAG_04283","SJAG_03232","SJAG_05000","SJAG_03428","SJAG_04862","SJAG_01074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72564,76323,105534,106639],"is_not":false,"summary":null,"term":"GO:0032790"},{"annotations":[116410],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[65368,107577,77141,105053,71599,78412,79996,118091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"}]},"cv_name":"biological_process","definition":"The disaggregation of a ribosome into its constituent components; includes the dissociation of ribosomal subunits.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03106":null,"SJAG_03189":null,"SJAG_03232":null,"SJAG_03428":null,"SJAG_04283":null,"SJAG_04862":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ribosome disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosome dissociation factor","type":"related"},{"name":"ribosome recycling","type":"narrow"}],"termid":"GO:0032790","terms_by_termid":{"GO:0032790":null,"GO:0072344":null,"GO:0140708":null}}


id: GO:0002500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by lysosomal resident proteases contributing to antigen processing and presentation.","definition_xrefs":["PMID:15771591","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"proteolysis within lysosome associated with antigen processing and presentation","synonyms":[{"name":"lysosomal proteolysis associated with antigen processing and presentation","type":"exact"}],"termid":"GO:0002500"}


id: FYPO:0001807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of adenine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal adenine import","synonyms":[{"name":"abnormal adenine import across plasma membrane","type":"exact"},{"name":"abnormal adenine import during mitotic cell cycle","type":"related"},{"name":"abnormal adenine import during vegetative growth","type":"exact"},{"name":"abnormal adenine import into cell","type":"exact"},{"name":"abnormal adenine uptake","type":"exact"}],"termid":"FYPO:0001807"}


id: FYPO:0003587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the increase in gross chromosomal rearrangements that normally results from processing arrested replication forks is diminished or abolished.","definition_xrefs":["PMID:23093942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"loss of gross chromosomal rearrangement during replication fork processing","termid":"FYPO:0003587"}


id: GO:0044291
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extended zone of intimate apposition between two cells containing one or more types of intercellular junctions, e.g., the intercalated disk of muscle.","definition_xrefs":["NIF_Subcellular:sao1299635018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell-cell contact zone","synonyms":[{"name":"cell cell contact zone","type":"exact"}],"termid":"GO:0044291"}


id: PBO:0000491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptin family","termid":"PBO:0000491"}


id: PBO:0087516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; in concert with Sgs1p-Top2p-Rmi1p, stimulates DNA catenation/decatenation activity of Top3p; protein abundance increases in response to DNA replication s","termid":"PBO:0087516"}


id: PBO:0056640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15","termid":"PBO:0056640"}


id: PBO:0068668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 49, pseudogene","termid":"PBO:0068668"}


id: PBO:0109835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTT co-chaperone complex subunit Tti2","termid":"PBO:0109835"}


id: SO:0001252
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A radiation hybrid map is a physical map.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"STS","termid":"SO:0000331"},{"relation_name":"is_a","term_name":"fragment_assembly","termid":"SO:0001249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RH_map","synonyms":[{"name":"RH map","type":"exact"},{"name":"radiation hybrid map","type":"exact"}],"termid":"SO:0001252"}


id: PBO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-surrounded_by","termid":"PBO:0034107"}


id: PBO:0005055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght8 (predicted)","termid":"PBO:0005055"}


id: GO:0008945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Arg-Xaa and Lys-Xaa bonds in oligopeptides, even when P1' residue is proline.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oligopeptidase B activity (obsolete GO:0008945)","synonyms":[{"name":"Escherichia coli alkaline proteinase II","type":"related"},{"name":"oligopeptidase B activity","type":"exact"},{"name":"protease II activity","type":"related"}],"termid":"GO:0008945"}


id: PBO:0048260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase 2","termid":"PBO:0048260"}


id: PBO:0041901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBARP divergent transcript","termid":"PBO:0041901"}


id: PBO:0072175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 2","termid":"PBO:0072175"}


id: PBO:0065804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1C, member RAS oncogene family pseudogene","termid":"PBO:0065804"}


id: PBO:0050863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 2","termid":"PBO:0050863"}


id: GO:1905229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyrotropin-releasing hormone (TRH) stimulus. TRH increases the secretion of thyroid-stimulating hormone by the anterior pituitary.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:21382270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to thyrotropin-releasing hormone","termid":"GO:1905225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thyrotropin-releasing hormone","synonyms":[{"name":"cellular response to TRH","type":"related"},{"name":"cellular response to protirelin","type":"exact"}],"termid":"GO:1905229"}


id: PBO:0031416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell-substrate_adhesion","termid":"PBO:0031416"}


id: MONDO:0020202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete conjunctival lymphangiectasia (obsolete MONDO:0020202)","secondary_identifiers":["ICD9:372.89","Orphanet:98614","SCTID:231871007"],"termid":"MONDO:0020202","xrefs":{"Monarch":{"xref_id":"0020202"}}}


id: PBO:0078719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 4-1","termid":"PBO:0078719"}


id: MONDO:0006634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm of the anterior pituitary gland in which the neoplastic cells stain positive with acidic dyes.","definition_xrefs":["NCIT:C6780"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"pituitary gland adenoma","termid":"MONDO:0006373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary gland acidophil adenoma","secondary_identifiers":["MEDGEN:1748","DOID:5392","EFO:1000791","UMLS:C0001433","ICDO:8280/0","MESH:D000239"],"synonyms":[{"name":"acidophil adenoma","type":"exact"},{"name":"eosinophil adenoma","type":"exact"},{"name":"pituitary gland acidophil adenoma","type":"exact"}],"termid":"MONDO:0006634","xrefs":{"Monarch":{"xref_id":"0006634"}}}


id: GO:0160082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-prolyl-[hypoxia-inducible factor alpha subunit] + O2 = CO2 + succinate + trans-4-hydroxy-L-prolyl-[hypoxia-inducible factor alpha subunit].","definition_xrefs":["PMID:11598268","PMID:11595184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline 4-dioxygenase activity","termid":"GO:0031545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hypoxia-inducible factor-proline dioxygenase activity","secondary_identifiers":["EC:1.14.11.29","RHEA:48400"],"synonyms":[{"name":"HIF hydroxylase","type":"broad"},{"name":"HIF prolyl hydroxylase","type":"exact"}],"termid":"GO:0160082"}


id: GO:0032209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a recombinational process involved in the maintenance of proper telomeric length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via recombination","termid":"GO:0032207"},{"relation_name":"is_a","term_name":"positive regulation of mitotic recombination","termid":"GO:0045951"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination at telomere","termid":"GO:0072696"},{"relation_name":"positively_regulates","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310","GO:0032200"],"is_obsolete":false,"name":"positive regulation of telomere maintenance via recombination","synonyms":[{"name":"activation of telomere maintenance via recombination","type":"narrow"},{"name":"stimulation of telomere maintenance via recombination","type":"narrow"},{"name":"up regulation of telomere maintenance via recombination","type":"exact"},{"name":"up-regulation of telomere maintenance via recombination","type":"exact"},{"name":"upregulation of telomere maintenance via recombination","type":"exact"}],"termid":"GO:0032209"}


id: GO:1900782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving fumiquinazoline F.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline F metabolic process (obsolete GO:1900782)","synonyms":[{"name":"fumiquinazoline F metabolism","type":"exact"}],"termid":"GO:1900782"}


id: GO:0097719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of neural tissue following its loss or destruction.","definition_xrefs":["Wikipedia:Neuroregeneration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural tissue regeneration","synonyms":[{"name":"neuroregeneration","type":"related"}],"termid":"GO:0097719"}


id: PBO:0027296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tetranucleate_vegetative_cell","termid":"PBO:0027296"}


id: PBO:0001423
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.1","termid":"PBO:0001423"}


id: MONDO:0006597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal responses to sunlight or artificial light due to extreme reactivity of light-absorbing molecules in tissues. It refers almost exclusively to skin photosensitivity, including sunburn, reactions due to repeated prolonged exposure in the absence of photosensitizing factors, and reactions requiring photosensitizing factors such as photosensitizing agents and certain diseases. With restricted reference to skin tissue, it does not include photosensitivity of the eye to light, as in photophobia or photosensitive epilepsy.","definition_xrefs":["MESH:D010787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiodermatitis","termid":"MONDO:0043771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"photosensitivity disease","secondary_identifiers":["SCTID:22649008","MEDGEN:19281","EFO:1000752","DOID:3159","UMLS:C0031762"],"synonyms":[{"name":"disorder, photosensitivity","type":"exact"},{"name":"disorders, photosensitivity","type":"exact"},{"name":"photodermatitides","type":"exact"},{"name":"photodermatitis","type":"exact"},{"name":"photodermatosis","type":"exact"},{"name":"photosensitivity disorder","type":"exact"},{"name":"photosensitization","type":"exact"}],"termid":"MONDO:0006597","xrefs":{"Monarch":{"xref_id":"0006597"}}}


id: MONDO:0006986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An enlarged thyroid gland with at least 50% of the gland situated behind the sternum. It is an unusual presentation of an intrathoracic goiter. Substernal goiters frequently cause compression on the trachea leading to deviation, narrowing, and respiratory symptoms.","definition_xrefs":["MESH:D006045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substernal goiter","secondary_identifiers":["MEDGEN:9066","UMLS:C0018024","DOID:13200","SCTID:66392007"],"synonyms":[{"name":"retrosternal thyroid goiter","type":"exact"},{"name":"retrosternal thyroid goitre","type":"exact"}],"termid":"MONDO:0006986","xrefs":{"Monarch":{"xref_id":"0006986"}}}


id: PBO:0042403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 14B","termid":"PBO:0042403"}


id: GO:0043576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"respiratory gaseous exchange by respiratory system","termid":"GO:0007585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory gaseous exchange","termid":"GO:0043576"}


id: PBO:0070342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 15","termid":"PBO:0070342"}


id: GO:1902325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chlorophyll biosynthetic process.","definition_xrefs":["PMID:23555952","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll biosynthetic process","termid":"GO:0010380"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"negatively_regulates","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"negative regulation of chlorophyll biosynthetic process","synonyms":[{"name":"down regulation of chlorophyll anabolism","type":"exact"},{"name":"down regulation of chlorophyll biosynthesis","type":"exact"},{"name":"down regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"down regulation of chlorophyll formation","type":"exact"},{"name":"down regulation of chlorophyll synthesis","type":"exact"},{"name":"down-regulation of chlorophyll anabolism","type":"exact"},{"name":"down-regulation of chlorophyll biosynthesis","type":"exact"},{"name":"down-regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"down-regulation of chlorophyll formation","type":"exact"},{"name":"down-regulation of chlorophyll synthesis","type":"exact"},{"name":"downregulation of chlorophyll anabolism","type":"exact"},{"name":"downregulation of chlorophyll biosynthesis","type":"exact"},{"name":"downregulation of chlorophyll biosynthetic process","type":"exact"},{"name":"downregulation of chlorophyll formation","type":"exact"},{"name":"downregulation of chlorophyll synthesis","type":"exact"},{"name":"inhibition of chlorophyll anabolism","type":"narrow"},{"name":"inhibition of chlorophyll biosynthesis","type":"narrow"},{"name":"inhibition of chlorophyll biosynthetic process","type":"narrow"},{"name":"inhibition of chlorophyll formation","type":"narrow"},{"name":"inhibition of chlorophyll synthesis","type":"narrow"},{"name":"negative regulation of chlorophyll anabolism","type":"exact"},{"name":"negative regulation of chlorophyll biosynthesis","type":"exact"},{"name":"negative regulation of chlorophyll formation","type":"exact"},{"name":"negative regulation of chlorophyll synthesis","type":"exact"}],"termid":"GO:1902325"}


id: PBO:0031557
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_catalytic_activity","termid":"PBO:0031557"}


id: MONDO:0009123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare primary monoamine neurotransmitter synthesis disorder with norepinephrine and adrenaline deficiency that leads to young-onset severe orthostatic hypotension and eyelid ptosis.","definition_xrefs":["Orphanet:230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of catecholamine synthesis","termid":"MONDO:0017759"},{"relation_name":"is_a","term_name":"inherited orthostatic hypotension","termid":"MONDO:0021272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"orthostatic hypotension 1","secondary_identifiers":["OMIM:223360","UMLS:C4746777","NANDO:2200597","DOID:0090145","GARD:1903","SCTID:237923004","ICD9:270.8","MEDGEN:1648402","MESH:C535600"],"synonyms":[{"name":"congenital dopamine beta-hydroxylase deficiency","type":"exact"},{"name":"dopamine BETA-HYDROXYLASE deficiency, congenital","type":"related"},{"name":"dopamine beta hydroxylase deficiency","type":"related"},{"name":"dopamine beta-hydroxylase deficiency","type":"exact"},{"name":"noradrenaline deficiency","type":"exact"},{"name":"norepinephrine deficiency","type":"exact"},{"name":"orthostatic hypotension 1, due to DBH deficiency","type":"exact"}],"termid":"MONDO:0009123","xrefs":{"Monarch":{"xref_id":"0009123"}}}


id: PBO:0042223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin T1","termid":"PBO:0042223"}


id: PBO:0083867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein and component of SCF ubiquitin ligase complexes; involved in ubiquitin-dependent protein catabolism; readily monoubiquitinated in vitro by SCF-Ubc4 complexes; SCF-Ucc1 regulates level of Cit2 citrate synthase protein to maintain citrate homeostasis, acts as metabolic switch for glyoxylate cycle; UCC1 transcription is downregulated in cells grown on C2-compounds","termid":"PBO:0083867"}


id: PBO:0089469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATPase Mgs1","termid":"PBO:0089469"}


id: SO:0001346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_2_prime_O_dimethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_two_prime_O_dimethyluridine","secondary_identifiers":["RNAMOD:054"],"synonyms":[{"name":"5,2'-O-dimethyluridine","type":"exact"},{"name":"five two prime O dimethyluridine","type":"exact"},{"name":"m5Um","type":"exact"}],"termid":"SO:0001346"}


id: PBO:0062542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily I member 1","termid":"PBO:0062542"}


id: GO:0047012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(P)+ + 3-beta-hydroxy-4-alpha-methyl-5-alpha-cholest-7-ene-4-beta-carboxylate = NAD(P)H + H+ + CO2 + 4-alpha-methyl-5-alpha-cholest-7-en-3-one.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity (obsolete GO:0047012)","synonyms":[{"name":"3-beta-hydroxy-4-alpha-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating) activity","type":"exact"}],"termid":"GO:0047012"}


id: PBO:0083516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MES1/YGR264C, which encodes methionyl-tRNA synthetase","termid":"PBO:0083516"}


id: MONDO:1011340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Occupational disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occupational disorder, non-human animal","termid":"MONDO:1011340","xrefs":{"Monarch":{"xref_id":"1011340"}}}


id: PBO:0061362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 22","termid":"PBO:0061362"}


id: GO:0035538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a carbohydrate response element (ChoRE) found in the promoters of genes whose expression is regulated in response to carbohydrates, such as the triglyceride synthesis genes.","definition_xrefs":["GOC:BHF","PMID:20001964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0000976","GO:0003677"],"is_obsolete":false,"name":"carbohydrate response element binding","synonyms":[{"name":"ChoRE binding","type":"exact"}],"termid":"GO:0035538"}


id: PBO:0087157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA lariat debranching enzyme; catalyzes debranching of lariat introns formed during pre-mRNA splicing; required for efficient Ty1 transposition; knockdown of human homolog Dbr1 rescues toxicity of RNA-binding proteins TDP-43 and FUS which are implicated in amyotrophic lateral sclerosis (ALS), suggests potential therapeutic target for ALS and related TDP-43 proteinopathies; human homolog DBR1 can complement yeast dbr1 null mutant","termid":"PBO:0087157"}


id: FYPO:0002102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000298","FYPO:0001312","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to UV","synonyms":[{"name":"normal DNA damage checkpoint during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation during cellular response to UV","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0002102"}


id: GO:0140373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of one or more ubiquitin groups to a lysine residue at position 14 of the histone.","definition_xrefs":["GOC:mah","PMID:31468675"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K14 ubiquitination (obsolete GO:0140373)","synonyms":[{"name":"histone H3 ubiquitination at K14","type":"exact"},{"name":"histone H3-K14 ubiquitylation","type":"exact"},{"name":"histone H3K14 ubiquitination","type":"exact"}],"termid":"GO:0140373"}


id: SO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One of two segments of homology found at all three mating loci (HML, MAT and HMR).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X_region","synonyms":[{"name":"x-region","type":"exact"}],"termid":"SO:0002030"}


id: PBO:0069929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1222, pseudogene","termid":"PBO:0069929"}


id: PBO:0002725
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiskott-Aldrich syndrome","termid":"PBO:0002725"}


id: MONDO:0004770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The anterior displacement of the eye within the orbit, giving a bulging appearance.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"exophthalmos","secondary_identifiers":["MESH:D005094","SCTID:18265008","HP:0000520","NCIT:C118763","ICD9:376.30","DOID:9370","UMLS:C0015300","MEDGEN:41917"],"synonyms":[{"name":"exophthalmos","type":"exact"},{"name":"exophthalmos (disease)","type":"exact"},{"name":"proptosis","type":"exact"}],"termid":"MONDO:0004770","xrefs":{"Monarch":{"xref_id":"0004770"}}}


id: PBO:0043100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 12","termid":"PBO:0043100"}


id: FYPO:0007369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell's redox status differs from normal, as measured by the ratios of reduced to oxidized forms of one or more metabolites (e.g. NAD+:NADH).","definition_xrefs":["PomBase:mah","PMID:32319721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"altered cellular redox status","termid":"FYPO:0007369"}


id: GO:0106323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4S)-limonene + NADPH+= + H+ + O2 = NADP+ + H2O + (4S)-limonene-1,2-epoxide.","definition_xrefs":["RHEA:26085"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-limonene 1,2-monooxygenase NADPH activity (obsolete GO:0106323)","termid":"GO:0106323"}


id: PBO:0046824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 3","termid":"PBO:0046824"}


id: PBO:0062636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 5 pseudogene","termid":"PBO:0062636"}


id: PBO:0030798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030798"}


id: PBO:0080884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N6-threonylcarbamoyltransferase domain containing","termid":"PBO:0080884"}


id: PR:O14278
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug129 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 129 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.09c","synonyms":[{"name":"Spom972h-mug129","type":"exact"}],"termid":"PR:O14278"}


id: MONDO:0005161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process caused by a human papillomavirus. This infection can cause abnormal tissue growth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human papilloma virus infection","secondary_identifiers":["MEDGEN:87475","SCTID:240532009","UMLS:C0343641","EFO:0001668","NCIT:C27851","ICD9:079.4","DOID:11166"],"synonyms":[{"name":"Human Papillomavirus infection","type":"exact"},{"name":"Human papilloma Virus infection","type":"exact"},{"name":"Human papillomavirus caused disease or disorder","type":"exact"},{"name":"Human papillomavirus disease or disorder","type":"exact"},{"name":"Human papillomavirus infectious disease","type":"exact"}],"termid":"MONDO:0005161","xrefs":{"Monarch":{"xref_id":"0005161"}}}


id: PR:Q10335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02451","PRO:DNx","PANTHER:PTHR14145:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.07c","secondary_identifiers":["UniProtKB:Q10335"],"synonyms":[{"name":"Spom972h-PSMD6","type":"exact"}],"termid":"PR:Q10335"}


id: PBO:0116273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pseudopeptidase; conserved fungal protein and member of the M14 family of metallocarboxypeptidases but contains substitutions in active site residues important for catalysis and lacks activity with standard substrates; contains a cleavable pro domain; required for normal cell wall assembly in some strains","termid":"PBO:0116273"}


id: _global:assayed_protein
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and a protein gene product with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_protein","termid":"_global:assayed_protein"}


id: PBO:0060060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 7","termid":"PBO:0060060"}


id: GO:0019373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which arachidonic acid is converted to other compounds including epoxyeicosatrienoic acids and dihydroxyeicosatrienoic acids.","definition_xrefs":["PMID:17979511","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate metabolic process","termid":"GO:0019369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"epoxygenase P450 pathway","secondary_identifiers":["Reactome:R-HSA-2142670"],"termid":"GO:0019373"}


id: MONDO:0017305
data:
  {"annotated_genes":["SJAG_02453","SJAG_03011","SJAG_00938","SJAG_00108"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88860,88859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008962"},{"annotations":[87955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014885"},{"annotations":[87815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"}]},"cv_name":"mondo","definition":"A oculocutaneous albinism that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of melanin metabolism","termid":"MONDO:0018134"},{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00938":null,"SJAG_02453":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"syndromic oculocutaneous albinism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:E70.3","MEDGEN:1843078","GARD:21125","Orphanet:284811","UMLS:C5681016"],"synonyms":[{"name":"syndrome associated with oculocutaneous albinism","type":"exact"},{"name":"syndromic oculocutaneous albinism","type":"exact"}],"termid":"MONDO:0017305","terms_by_termid":{"MONDO:0008962":null,"MONDO:0011997":null,"MONDO:0014885":null},"xrefs":{"Monarch":{"xref_id":"0017305"}}}


id: MONDO:0008581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malposition of teeth with or without hypodontia/oligodontia","secondary_identifiers":["MEDGEN:442888","OMIM:189490","UMLS:C2752157"],"synonyms":[{"name":"ectopic eruption of teeth","type":"related"},{"name":"malposition of teeth with or without hypodontia/oligodontia","type":"exact"}],"termid":"MONDO:0008581","xrefs":{"Monarch":{"xref_id":"0008581"}}}


id: GO:1990776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an angiotensin stimulus. Angiotensin is any of three physiologically active peptides (angiotensin II, III, or IV) processed from angiotensinogen.","definition_xrefs":["PMID:22982863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to angiotensin","termid":"GO:1990776"}


id: MONDO:0005959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of symptoms that are two- to three-fold more common in those who work in large, energy-efficient buildings, associated with an increased frequency of headaches, lethargy, and dry skin. Clinical manifestations include hypersensitivity pneumonitis (alveolitis, extrinsic allergic); allergic rhinitis (rhinitis, allergic, perennial); asthma; infections, skin eruptions, and mucous membrane irritation syndromes. Current usage tends to be less restrictive with regard to the type of building and delineation of complaints. (From Segen, Dictionary of Modern Medicine, 1992)","definition_xrefs":["MESH:D018877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"sick building syndrome","secondary_identifiers":["SCTID:19076009","UMLS:C0037050","DOID:2710","EFO:0007484","MEDGEN:48661"],"termid":"MONDO:0005959","xrefs":{"Monarch":{"xref_id":"0005959"}}}


id: MONDO:0010417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Najm type X-linked intellectual deficit is a rare cerebellar dysgenesis syndrome characterized by variable clinical manifestations ranging from mild intellectual deficit with or without congenital nystagmus, to severe cognitive impairment associated with cerebellar and pontine hypoplasia/atrophy and abnormalities of cortical development.","definition_xrefs":["Orphanet:163937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Najm type","secondary_identifiers":["MEDGEN:437070","UMLS:C2677903","DOID:0060807","GARD:12669","MESH:C567466","OMIM:300749"],"synonyms":[{"name":"MICPCH","type":"exact"},{"name":"Micpch syndrome","type":"related"},{"name":"X-linked intellectual disability - microcephaly - pontocerebellar hypoplasia","type":"related"},{"name":"X-linked intellectual disability, Najm type","type":"related"},{"name":"X-linked intellectual disability-microcephaly-pontocerebellar hypoplasia syndrome","type":"exact"},{"name":"intellectual developmental disorder and microcephaly with pontine and cerebellar hypoplasia, X-linked dominant","type":"exact"},{"name":"intellectual disability and microcephaly with PONTINE and cerebellar hypoplasia","type":"related"},{"name":"intellectual disability and microcephaly with pontine and cerebellar hypoplasia","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Najm type","type":"related"},{"name":"mental retardation and microcephaly with PONTINE and cerebellar hypoplasia","type":"related"},{"name":"mental retardation and microcephaly with pontine and cerebellar hypoplasia","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Najm type","type":"related"},{"name":"microcephaly with pontine and cerebellar hypoplasia","type":"related"},{"name":"syndromic X-linked intellectual disability Najm type","type":"exact"}],"termid":"MONDO:0010417","xrefs":{"Monarch":{"xref_id":"0010417"}}}


id: GO:0045756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activation, by acetate, of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of initiation of acetate catabolic process by acetate","termid":"GO:0045147"},{"relation_name":"is_a","term_name":"positive regulation of acetate catabolic process","termid":"GO:0045754"},{"relation_name":"is_a","term_name":"positive regulation of response to acetate","termid":"GO:1901459"},{"relation_name":"positively_regulates","term_name":"initiation of acetate catabolic process by acetate","termid":"GO:0045146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of initiation of acetate catabolic process by acetate","synonyms":[{"name":"activation of initiation of acetate catabolic process by acetate","type":"narrow"},{"name":"positive regulation of initiation of acetate breakdown by acetate","type":"exact"},{"name":"positive regulation of initiation of acetate degradation by acetate","type":"exact"},{"name":"stimulation of initiation of acetate catabolic process by acetate","type":"narrow"},{"name":"up regulation of initiation of acetate catabolic process by acetate","type":"exact"},{"name":"up-regulation of initiation of acetate catabolic process by acetate","type":"exact"},{"name":"upregulation of initiation of acetate catabolic process by acetate","type":"exact"}],"termid":"GO:0045756"}


id: PBO:0049063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 78","termid":"PBO:0049063"}


id: MONDO:0009659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive lysosomal storage disease caused by deficiency of the enzyme galactosamine-6-sulfatase. It is characterized by skeletal and central nervous system deficits.","definition_xrefs":["NCIT:C84901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 4","termid":"MONDO:0018938"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561"],"is_obsolete":false,"name":"mucopolysaccharidosis type 4A","secondary_identifiers":["GARD:3785","NANDO:1200106","DOID:0111391","icd11.foundation:1919173641","MEDGEN:43375","OMIM:253000","Orphanet:309297","NANDO:2201178","SCTID:7259005","UMLS:C0086651"],"synonyms":[{"name":"GALNS deficiency","type":"exact"},{"name":"MPS 4A","type":"related"},{"name":"MPS IV A","type":"exact"},{"name":"MPS IVA","type":"related"},{"name":"MPS4A","type":"exact"},{"name":"MPSIVA","type":"exact"},{"name":"Morquio A disease","type":"broad"},{"name":"Morquio disease type A","type":"exact"},{"name":"Morquio syndrome A","type":"exact"},{"name":"N-acetylgalactosamine-6-sulfate sulfatase deficiency","type":"exact"},{"name":"galactosamine-6-sulfatase deficiency","type":"exact"},{"name":"mucopolysaccharidosis IVA","type":"exact"},{"name":"mucopolysaccharidosis type 4A","type":"exact"},{"name":"mucopolysaccharidosis type IVA","type":"exact"},{"name":"mucopolysaccharidosis, type 4A","type":"related"},{"name":"mucopolysaccharidosis, type IVA","type":"related"}],"termid":"MONDO:0009659","xrefs":{"Monarch":{"xref_id":"0009659"}}}


id: PBO:0028543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_primary_cell_septum_biogenesis","termid":"PBO:0028543"}


id: MONDO:0008406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of Emery-Dreifuss muscular dystrophy.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive Emery-Dreifuss muscular dystrophy (obsolete MONDO:0008406)","secondary_identifiers":["Orphanet:98855"],"synonyms":[{"name":"EDMD3","type":"exact"},{"name":"Emery-Dreifuss muscular dystrophy, autosomal recessive","type":"exact"}],"termid":"MONDO:0008406","xrefs":{"Monarch":{"xref_id":"0008406"}}}


id: MONDO:0016090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease","termid":"MONDO:0009499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0002561","MONDO:0005559","MONDO:0005244","MONDO:0005328"],"is_obsolete":false,"name":"late-infantile/juvenile Krabbe disease","secondary_identifiers":["SCTID:41142009","Orphanet:206443","GARD:20344"],"synonyms":[{"name":"Krabbe disease, late-onset","type":"exact"}],"termid":"MONDO:0016090","xrefs":{"Monarch":{"xref_id":"0016090"}}}


id: GO:1900260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA-directed 5'-3' RNA polymerase activity.","definition_xrefs":["GOC:pf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA-dependent RNA polymerase activity","synonyms":[{"name":"down regulation of PB1 proteins","type":"related"},{"name":"down regulation of PB2 proteins","type":"related"},{"name":"down regulation of RDRP","type":"related"},{"name":"down regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"down regulation of RNA replicase activity","type":"exact"},{"name":"down regulation of RNA synthetase activity","type":"related"},{"name":"down regulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"down regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"down regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"down regulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"down regulation of phage f2 replicase","type":"narrow"},{"name":"down regulation of polymerase L","type":"related"},{"name":"down regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"down regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"down regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"down regulation of ribonucleic replicase activity","type":"exact"},{"name":"down regulation of ribonucleic synthetase activity","type":"related"},{"name":"down regulation of transcriptase","type":"broad"},{"name":"down-regulation of PB1 proteins","type":"related"},{"name":"down-regulation of PB2 proteins","type":"related"},{"name":"down-regulation of RDRP","type":"related"},{"name":"down-regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"down-regulation of RNA replicase activity","type":"exact"},{"name":"down-regulation of RNA synthetase activity","type":"related"},{"name":"down-regulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"down-regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"down-regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"down-regulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"down-regulation of phage f2 replicase","type":"narrow"},{"name":"down-regulation of polymerase L","type":"related"},{"name":"down-regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"down-regulation of ribonucleic synthetase activity","type":"related"},{"name":"down-regulation of transcriptase","type":"broad"},{"name":"downregulation of PB1 proteins","type":"related"},{"name":"downregulation of PB2 proteins","type":"related"},{"name":"downregulation of RDRP","type":"related"},{"name":"downregulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"downregulation of RNA replicase activity","type":"exact"},{"name":"downregulation of RNA synthetase activity","type":"related"},{"name":"downregulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"downregulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"downregulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"downregulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"downregulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"downregulation of phage f2 replicase","type":"narrow"},{"name":"downregulation of polymerase L","type":"related"},{"name":"downregulation of ribonucleic acid replicase activity","type":"exact"},{"name":"downregulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"downregulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"downregulation of ribonucleic replicase activity","type":"exact"},{"name":"downregulation of ribonucleic synthetase activity","type":"related"},{"name":"downregulation of transcriptase","type":"broad"},{"name":"inhibition of PB1 proteins","type":"related"},{"name":"inhibition of PB2 proteins","type":"related"},{"name":"inhibition of RDRP","type":"related"},{"name":"inhibition of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"inhibition of RNA replicase activity","type":"exact"},{"name":"inhibition of RNA synthetase activity","type":"related"},{"name":"inhibition of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"inhibition of RNA-dependent RNA replicase activity","type":"exact"},{"name":"inhibition of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"inhibition of RNA-directed RNA polymerase activity","type":"narrow"},{"name":"inhibition of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"inhibition of phage f2 replicase","type":"narrow"},{"name":"inhibition of polymerase L","type":"related"},{"name":"inhibition of ribonucleic acid replicase activity","type":"exact"},{"name":"inhibition of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"inhibition of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"inhibition of ribonucleic replicase activity","type":"exact"},{"name":"inhibition of ribonucleic synthetase activity","type":"related"},{"name":"inhibition of transcriptase","type":"broad"},{"name":"negative regulation of 3D polymerase activity","type":"exact"},{"name":"negative regulation of PB1 proteins","type":"related"},{"name":"negative regulation of PB2 proteins","type":"related"},{"name":"negative regulation of RDRP","type":"related"},{"name":"negative regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"negative regulation of RNA replicase activity","type":"exact"},{"name":"negative regulation of RNA synthetase activity","type":"related"},{"name":"negative regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"negative regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"negative regulation of RNA-directed 5'-3' RNA polymerase activity","type":"exact"},{"name":"negative regulation of RNA-directed RNA polymerase activity","type":"broad"},{"name":"negative regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"negative regulation of phage f2 replicase","type":"narrow"},{"name":"negative regulation of polymerase L","type":"related"},{"name":"negative regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"negative regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"negative regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"negative regulation of ribonucleic replicase activity","type":"exact"},{"name":"negative regulation of ribonucleic synthetase activity","type":"related"},{"name":"negative regulation of transcriptase","type":"broad"}],"termid":"GO:1900260"}


id: GO:2000609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thyroid hormone generation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"thyroid hormone generation","termid":"GO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thyroid hormone generation","termid":"GO:2000609"}


id: PBO:0086384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative benzil reductase;(GFP)-fusion protein localizes to the cytoplasm and is induced by the DNA-damaging agent MMS; sequence similarity with short-chain dehydrogenase/reductases; null mutant has increased spontaneous Rad52p foci","termid":"PBO:0086384"}


id: GO:0061373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary axonal complex over time, from its formation to the mature structure. The mammillary axonal complex is formed by the axons from the lateral, medial mammillary and the dorsal premammillary nuclei which share a branching pattern. Every neuron gives off one axonal stem that bifurcates into 2 branches. One of the branches is directed dorsally to the thalamus and another caudally to the midbrain.","definition_xrefs":["GOC:dph","GOC:yaf","PMID:10662642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary body development","termid":"GO:0021767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary axonal complex development","termid":"GO:0061373"}


id: FYPO:0003155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cells grow from one end, and do not grow continuously, but instead oscillate between periods of growth and pauses during which no growth occurs.","definition_xrefs":["PMID:24146635","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell growth","termid":"FYPO:0003154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"intermittent monopolar cell growth","synonyms":[{"name":"intermittent monopolar vegetative cell growth","type":"exact"}],"termid":"FYPO:0003155"}


id: GO:0042799
data:
  {"annotated_genes":["SJAG_01146"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H4 L-lysine (position 20) = S-adenosyl-L-homocysteine + histone H4 N6-methyl-L-lysine (position 20). This reaction is the addition of a methyl group to the lysine residue at position 20 of the histone H4 protein.","definition_xrefs":["PMID:12086618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H4 methyltransferase activity","termid":"GO:0140939"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140096","GO:0008276","GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H4K20 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2301205","Reactome:R-HSA-5682965"],"synonyms":[{"name":"histone H4 lysine 20-specific methyltransferase activity","type":"exact"},{"name":"histone H4K20 methylase activity","type":"broad"},{"name":"histone H4K20 methylation","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H4-K20 specific)","type":"exact"},{"name":"histone methylase activity (H4-K20 specific)","type":"exact"},{"name":"histone methyltransferase activity (H4-K20 specific)","type":"exact"},{"name":"histone-H4K20 methyltransferase activity","type":"exact"}],"termid":"GO:0042799","terms_by_termid":{"GO:0140943":null}}


id: GO:0020030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protrusion that develops in the plasma membrane of a parasitized erythrocyte. An example of this component is found in Plasmodium species.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"infected host cell surface knob","termid":"GO:0020030"}


id: FYPO:0002730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the total amount of DNA in a cell is greater than normal when the cell is in a culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA content increased","termid":"FYPO:0002729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"DNA content increased during stationary phase","synonyms":[{"name":"increased DNA content during stationary phase","type":"exact"},{"name":"increased DNA level during stationary phase","type":"exact"}],"termid":"FYPO:0002730"}


id: PBO:0075777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 6","termid":"PBO:0075777"}


id: MONDO:0023023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lacrimal sac in a newborn due to blocked drainage of tears or infection.","definition_xrefs":["NCIT:C116819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dacryocystitis","termid":"MONDO:0004926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neonatal dacryocystitis","secondary_identifiers":["MEDGEN:542581","SCTID:23735003","UMLS:C0270178"],"synonyms":[{"name":"Neonatal Dacryocystitis","type":"related"},{"name":"Neonatal dacryocystitis","type":"related"},{"name":"neonatal dacryocystitis","type":"exact"}],"termid":"MONDO:0023023","xrefs":{"Monarch":{"xref_id":"0023023"}}}


id: MOD:00050
data:
  {"annotated_genes":["SJAG_00733","SJAG_02522"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82283,82504],"is_not":false,"summary":null,"term":"MOD:00050"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-acetyl-L-alanine.","definition_xrefs":["PubMed:363452","RESID:AA0041","PubMed:4700463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00733":null,"SJAG_02522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-alanine","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"(2S)-2-(acetamido)propanoic acid","type":"exact"},{"name":"2-(acetylamino)propanoic acid","type":"exact"},{"name":"2-(acetylazanyl)propanoic acid","type":"exact"},{"name":"AcAla","type":"exact"},{"name":"MOD_RES N-acetylalanine","type":"exact"},{"name":"N-acetyl-L-alanine","type":"exact"},{"name":"N-acetylated L-alanine","type":"exact"},{"name":"acetylalanine","type":"exact"}],"termid":"MOD:00050","terms_by_termid":{"MOD:00050":null}}


id: MONDO:0016286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenoid cystic carcinoma of the cervix uteri (obsolete MONDO:0016286)","termid":"MONDO:0016286","xrefs":{"Monarch":{"xref_id":"0016286"}}}


id: PBO:0050205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 22","termid":"PBO:0050205"}


id: PBO:0046455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 like 3","termid":"PBO:0046455"}


id: MONDO:0005023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma entirely confined to the mammary ducts. It is also known as DCIS. There is no evidence of invasion of the basement membrane. Currently, it is classified into three categories: High-grade DCIS, intermediate-grade DCIS and low-grade DCIS. In this classification the DCIS grade is defined by a combination of nuclear grade, architectural growth pattern and presence of necrosis. The size of the lesion as well as the grade and the clearance margins play a major role in dictating the most appropriate therapy for DCIS.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma in situ","termid":"MONDO:0003218"},{"relation_name":"is_a","term_name":"breast intraductal proliferative lesion","termid":"MONDO:0004007"},{"relation_name":"is_a","term_name":"breast carcinoma in situ","termid":"MONDO:0004658"},{"relation_name":"is_a","term_name":"breast ductal adenocarcinoma","termid":"MONDO:0005590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ductal breast carcinoma in situ","secondary_identifiers":["MESH:D002285","UMLS:C0007124","EFO:0000432","ICDO:8500/2","NCIT:C2924","DOID:0060074","ICD9:233.0","ONCOTREE:DCIS","MEDGEN:765"],"synonyms":[{"name":"DCIS","type":"exact"},{"name":"breast ductal carcinoma in situ","type":"related"},{"name":"carcinoma in situ of mammary duct","type":"exact"},{"name":"ductal breast carcinoma in situ","type":"exact"},{"name":"ductal carcinoma in situ","type":"exact"},{"name":"ductal carcinoma in situ (DCIS)","type":"exact"},{"name":"ductal carcinoma in situ of breast","type":"exact"},{"name":"ductal carcinoma in situ of the breast","type":"exact"},{"name":"intraductal breast carcinoma","type":"exact"},{"name":"intraductal carcinoma","type":"exact"},{"name":"intraductal carcinoma of breast","type":"exact"},{"name":"intraductal carcinoma of the breast","type":"exact"},{"name":"mammary duct carcinoma in situ","type":"exact"},{"name":"mammary duct in situ carcinoma","type":"exact"},{"name":"non-infiltrating ductal adenocarcinoma of breast","type":"exact"},{"name":"non-infiltrating ductal adenocarcinoma of the breast","type":"exact"},{"name":"non-infiltrating ductal breast adenocarcinoma","type":"exact"},{"name":"non-infiltrating ductal breast carcinoma","type":"exact"},{"name":"non-infiltrating ductal carcinoma of breast","type":"exact"},{"name":"non-infiltrating ductal carcinoma of the breast","type":"exact"},{"name":"non-infiltrating intraductal adenocarcinoma","type":"exact"},{"name":"non-infiltrating intraductal adenocarcinoma of breast","type":"exact"},{"name":"non-infiltrating intraductal adenocarcinoma of the breast","type":"exact"},{"name":"non-infiltrating intraductal breast adenocarcinoma","type":"exact"},{"name":"non-infiltrating intraductal carcinoma","type":"exact"},{"name":"non-invasive ductal adenocarcinoma of breast","type":"exact"},{"name":"non-invasive ductal adenocarcinoma of the breast","type":"exact"},{"name":"non-invasive ductal breast adenocarcinoma","type":"exact"},{"name":"non-invasive ductal breast carcinoma","type":"exact"},{"name":"non-invasive ductal carcinoma of breast","type":"exact"},{"name":"non-invasive ductal carcinoma of the breast","type":"exact"},{"name":"non-invasive intraductal adenocarcinoma of breast","type":"exact"},{"name":"non-invasive intraductal adenocarcinoma of the breast","type":"exact"},{"name":"non-invasive intraductal breast adenocarcinoma","type":"exact"},{"name":"stage 0 mammary duct carcinoma","type":"exact"}],"termid":"MONDO:0005023","xrefs":{"Monarch":{"xref_id":"0005023"}}}


id: PBO:0053659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 836","termid":"PBO:0053659"}


id: PBO:0075407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 5","termid":"PBO:0075407"}


id: MONDO:0007430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dens evaginatus","secondary_identifiers":["icd11.foundation:474468588","SCTID:63691004","MEDGEN:78585","OMIM:125280","UMLS:C0266034"],"synonyms":[{"name":"dens evaginatus","type":"exact"}],"termid":"MONDO:0007430","xrefs":{"Monarch":{"xref_id":"0007430"}}}


id: FYPO:0001470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tacrolimus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on tacrolimus","synonyms":[{"name":"normal cell population growth in presence of tacrolimus","type":"exact"},{"name":"normal cell population growth on tacrolimus","type":"exact"},{"name":"normal cellular response to FK506","type":"exact"},{"name":"normal cellular response to tacrolimus","type":"related"},{"name":"normal vegetative cell population growth on tacrolimus","type":"exact"}],"termid":"FYPO:0001470"}


id: MONDO:0020181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mesenchymatous palpebral tumor (obsolete MONDO:0020181)","secondary_identifiers":["Orphanet:98591"],"termid":"MONDO:0020181","xrefs":{"Monarch":{"xref_id":"0020181"}}}


id: GO:0005850
data:
  {"annotated_genes":["SJAG_05003","SJAG_03629","SJAG_00466"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73155,79414,79810],"is_not":false,"summary":null,"term":"GO:0005850"}]},"cv_name":"cellular_component","definition":"Complex of three heterogeneous polypeptide chains, that form a ternary complex with initiator methionyl-tRNA and GTP. This ternary complex binds to free 40S subunit, which subsequently binds the 5' end of mRNA.","definition_xrefs":["PMID:10216940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00466":null,"SJAG_03629":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 complex","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Wikipedia:EIF-2"],"synonyms":[{"name":"eIF-2","type":"exact"},{"name":"eIF2","type":"exact"}],"termid":"GO:0005850","terms_by_termid":{"GO:0005850":null}}


id: PBO:0088774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Kri1","termid":"PBO:0088774"}


id: PBO:0076809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere maintenance 2","termid":"PBO:0076809"}


id: MONDO:0002843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastritis resulting from fungi.","definition_xrefs":["NCIT:C27342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"fungal gastritis","secondary_identifiers":["SCTID:723097009","MEDGEN:181761","UMLS:C0948638","DOID:4034"],"synonyms":[{"name":"Fungi caused gastritis (disease)","type":"exact"},{"name":"Fungi gastritis (disease)","type":"exact"},{"name":"fungal gastritis","type":"exact"}],"termid":"MONDO:0002843","xrefs":{"Monarch":{"xref_id":"0002843"}}}


id: GO:0043525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"positively_regulates","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron apoptotic process","synonyms":[{"name":"activation of neuron apoptosis","type":"narrow"},{"name":"positive regulation of neuron apoptosis","type":"narrow"},{"name":"positive regulation of programmed cell death, neurons","type":"exact"},{"name":"stimulation of neuron apoptosis","type":"narrow"},{"name":"up regulation of neuron apoptosis","type":"exact"},{"name":"up-regulation of neuron apoptosis","type":"exact"},{"name":"upregulation of neuron apoptosis","type":"exact"}],"termid":"GO:0043525"}


id: GO:1903342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic DNA double-strand break formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25103240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation","termid":"GO:1903341"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of meiotic DNA double-strand break formation","synonyms":[{"name":"down regulation of meiotic DNA double-strand break formation","type":"exact"},{"name":"down-regulation of meiotic DNA double-strand break formation","type":"exact"},{"name":"downregulation of meiotic DNA double-strand break formation","type":"exact"},{"name":"inhibition of meiotic DNA double-strand break formation","type":"narrow"}],"termid":"GO:1903342"}


id: GO:0016776
data:
  {"annotated_genes":["SJAG_02420","SJAG_01474","SJAG_02038","SJAG_04282","SJAG_04849","SJAG_00244","SJAG_02421","SJAG_04657","SJAG_01080","SJAG_00779","SJAG_03798","SJAG_02887"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033857"},{"annotations":[73669,73875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004017"},{"annotations":[72797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004798"},{"annotations":[120049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120136"},{"annotations":[77715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004385"},{"annotations":[58631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052723"},{"annotations":[72796,77934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004550"},{"annotations":[75708,71821,75766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008972"},{"annotations":[76082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004631"},{"annotations":[116517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008976"},{"annotations":[82237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor).","definition_xrefs":["EC:2.7.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00779":null,"SJAG_01080":null,"SJAG_01474":null,"SJAG_02038":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02887":null,"SJAG_03798":null,"SJAG_04282":null,"SJAG_04657":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphotransferase activity, phosphate group as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0016776","terms_by_termid":{"GO:0004017":null,"GO:0004385":null,"GO:0004550":null,"GO:0004631":null,"GO:0004798":null,"GO:0008972":null,"GO:0008976":null,"GO:0033857":null,"GO:0033862":null,"GO:0052723":null,"GO:0120136":null}}


id: MONDO:0024973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cattle disease of uncertain cause, probably an allergic reaction.","definition_xrefs":["MESH:D011016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine respiratory disease complex","termid":"MONDO:0005678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia, atypical interstitial, of cattle","synonyms":[{"name":"Adenomatoses, bovine pulmonary","type":"related"},{"name":"Fog fever","type":"related"},{"name":"adenomatosis, bovine pulmonary","type":"related"},{"name":"adenomatosis, pulmonary, bovine","type":"related"},{"name":"atypical interstitial pneumonia of cattle","type":"related"},{"name":"bovine pulmonary Adenomatoses","type":"related"},{"name":"bovine pulmonary adenomatosis","type":"related"},{"name":"emphysema, acute bovine pulmonary","type":"related"},{"name":"fever, Fog","type":"related"},{"name":"pulmonary Adenomatoses, bovine","type":"related"},{"name":"pulmonary adenomatosis, bovine","type":"related"}],"termid":"MONDO:0024973","xrefs":{"Monarch":{"xref_id":"0024973"}}}


id: GO:0052375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism avoids the effects of nitric oxide produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance by organism of symbiont-produced nitric oxide (obsolete GO:0052375)","synonyms":[{"name":"evasion or tolerance by organism of symbiont NO","type":"exact"},{"name":"evasion or tolerance by organism of symbiont nitric oxide","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced NO","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced nitric oxide","type":"exact"},{"name":"evasion or tolerance of NO produced by symbiont in response to organism","type":"exact"},{"name":"evasion or tolerance of nitric oxide produced by symbiont in response to organism","type":"exact"}],"termid":"GO:0052375"}


id: GO:0009446
data:
  {"annotated_genes":["SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane; putrescine can be synthesized from arginine or ornithine and is the metabolic precursor of spermidine and spermine.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"putrescine anabolism","type":"exact"},{"name":"putrescine biosynthesis","type":"exact"},{"name":"putrescine formation","type":"exact"},{"name":"putrescine synthesis","type":"exact"}],"termid":"GO:0009446","terms_by_termid":{"GO:0033387":null}}


id: GO:1900664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emodin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"emodin biosynthetic process","termid":"GO:1900575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of emodin biosynthetic process","synonyms":[{"name":"regulation of emodin anabolism","type":"exact"},{"name":"regulation of emodin biosynthesis","type":"exact"},{"name":"regulation of emodin formation","type":"exact"},{"name":"regulation of emodin synthesis","type":"exact"}],"termid":"GO:1900664"}


id: GO:0070652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that localizes to interphase centrosomes and to mitotic spindle tubules and regulates mitotic spindle assembly and centrosome integrity; in human, the complex consists of eight subunits, some of which are homologous to subunits of the Drosophila Augmin complex.","definition_xrefs":["PMID:19427217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"HAUS complex","synonyms":[{"name":"HAUS augmin complex","type":"exact"}],"termid":"GO:0070652"}


id: GO:1901490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["PMID:20133819","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphangiogenesis","synonyms":[{"name":"regulation of lymph vessel formation","type":"exact"}],"termid":"GO:1901490"}


id: GO:0070946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a gram-positive bacterium by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"},{"relation_name":"part_of","term_name":"defense response to Gram-positive bacterium","termid":"GO:0050830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of gram-positive bacterium","synonyms":[{"name":"neutrophil mediated killing of gram-positive bacterium","type":"exact"}],"termid":"GO:0070946"}


id: GO:0098780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) in response to the depolarization of one or more mitochondria.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitochondrial depolarisation","secondary_identifiers":["Reactome:R-HSA-9840373"],"termid":"GO:0098780"}


id: PBO:0058603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6735","termid":"PBO:0058603"}


id: MONDO:0017270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal ichthyosis syndrome (obsolete MONDO:0017270)","secondary_identifiers":["Orphanet:281217"],"termid":"MONDO:0017270","xrefs":{"Monarch":{"xref_id":"0017270"}}}


id: PBO:0050311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 13","termid":"PBO:0050311"}


id: MOD:00243
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form L-cysteine oxazole-4-carboxylic acid.","definition_xrefs":["PubMed:8183941","RESID:AA0238","PubMed:8895467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine oxazole-4-carboxylic acid","synonyms":[{"name":"2-(1-azanyl-2-sulfanylethyl)-4-oxazolecarboxylic acid","type":"exact"},{"name":"2-[(1R)-1-amino-2-sulfanylethyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazole-4-carboxylic acid (Cys-Ser)","type":"exact"},{"name":"L-cysteine oxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00243"}


id: PBO:0088827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex NOT box subunit 2","termid":"PBO:0088827"}


id: PBO:0003731
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of ERAD pathway","termid":"PBO:0003731"}


id: PBO:0040605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAGE family member 3","termid":"PBO:0040605"}


id: GO:0052834
data:
  {"annotated_genes":["SJAG_03739"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008934"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol phosphate + H2O = myo-inositol + phosphate.","definition_xrefs":["EC:3.1.3.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"inositol monophosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:24056","MetaCyc:RXN-10949"],"synonyms":[{"name":"L-myo-inositol-phosphate phosphatase activity","type":"related"},{"name":"inositol phosphatase activity","type":"related"},{"name":"inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"inositol-phosphate phosphatase activity","type":"related"},{"name":"myo-inositol monophosphatase activity","type":"related"},{"name":"myo-inositol phosphatase activity","type":"related"},{"name":"myo-inositol-1(or 4)-phosphate phosphohydrolase activity","type":"broad"},{"name":"myo-inositol-phosphatase activity","type":"related"},{"name":"myo-inositol-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0052834","terms_by_termid":{"GO:0008934":null}}


id: GO:0097472
data:
  {"annotated_genes":["SJAG_03421","SJAG_03967","SJAG_00342","SJAG_03061","SJAG_03048","SJAG_01825","SJAG_01000","SJAG_00150"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81902,97687,73318,81252,107638,80208,78006,81365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004693"}]},"cv_name":"molecular_function","definition":"Cyclin-dependent catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01000":null,"SJAG_01825":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0004672","GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"cyclin-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0097472","terms_by_termid":{"GO:0004693":null}}


id: PBO:0000398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim15 (predicted)","termid":"PBO:0000398"}


id: SO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An snRNA required for the splicing of the minor U12-dependent class of eukaryotic nuclear introns. It forms a base paired complex with U6atac_snRNA (SO:0000397).","definition_xrefs":["PMID:12409455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4atac_snRNA","synonyms":[{"name":"U4atac small nuclear RNA","type":"exact"},{"name":"U4atac snRNA","type":"exact"},{"name":"small nuclear RNA U4atac","type":"exact"},{"name":"snRNA U4atac","type":"exact"}],"termid":"SO:0000394"}


id: PBO:0065491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome inhibitor subunit 1","termid":"PBO:0065491"}


id: PBO:0035924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2B-K119_ubiquitination_during_vegetative_growth","termid":"PBO:0035924"}


id: PBO:0069544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 815, pseudogene","termid":"PBO:0069544"}


id: PBO:0048771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchored molecule like","termid":"PBO:0048771"}


id: PBO:0089136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI inositol deacylase Bst1","termid":"PBO:0089136"}


id: FYPO:0005064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in telomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"},{"relation_name":"is_a","term_name":"abnormal histone methylation at telomere during vegetative growth","termid":"FYPO:0007375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at telomere during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at telomere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at telomere during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at telomeric region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 methylation at telomere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at telomere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0005064"}


id: GO:1904918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-histidine from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","GO_REF:0000078","GOC:kmv","PMID:22822152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-histidine transmembrane transport","termid":"GO:0089709"},{"relation_name":"is_a","term_name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-histidine transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"transmembrane L-histidine transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:1904918"}


id: PBO:0055422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2852","termid":"PBO:0055422"}


id: MONDO:0032828
data:
  {"annotated_genes":["SJAG_00668"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88843],"is_not":false,"summary":null,"term":"MONDO:0032828"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00668":null},"genotype_count":0,"is_obsolete":false,"name":"spastic tetraplegia and axial hypotonia, progressive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684731","OMIM:618598","UMLS:C5231422"],"synonyms":[{"name":"SPASTIC TETRAPLEGIA AND AXIAL HYPOTONIA, PROGRESSIVE","type":"related"},{"name":"STAHP","type":"related"},{"name":"Sod1 Deficiency, Autosomal Recessive","type":"related"}],"termid":"MONDO:0032828","terms_by_termid":{"MONDO:0032828":null},"xrefs":{"Monarch":{"xref_id":"0032828"}}}


id: PBO:0088661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S13","termid":"PBO:0088661"}


id: PBO:0045810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A1 antisense RNA 1","termid":"PBO:0045810"}


id: GO:0060134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a startle magnitude is reduced when the startling stimulus is preceded by a low-intensity prepulse.","definition_xrefs":["GOC:dph","PMID:10341260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"part_of","term_name":"startle response","termid":"GO:0001964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prepulse inhibition","secondary_identifiers":["Wikipedia:Prepulse_inhibition"],"synonyms":[{"name":"PPI","type":"related"},{"name":"pre-pulse inhibition","type":"exact"}],"termid":"GO:0060134"}


id: MOD:00516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)","type":"related"},{"name":"Hex1HexNAc2","type":"related"}],"termid":"MOD:00516"}


id: PBO:0069764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1047, pseudogene","termid":"PBO:0069764"}


id: PBO:0065069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 1","termid":"PBO:0065069"}


id: PBO:0043602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collectin subfamily member 11","termid":"PBO:0043602"}


id: PBO:0044678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible 1 homolog 2","termid":"PBO:0044678"}


id: SO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe non synonymous variant that deletes bases from the coding sequence.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_indel","termid":"SO:0001820"},{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe_deletion","secondary_identifiers":["http://vat.gersteinlab.org/formats.php","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html","SO:0001652"],"synonyms":[{"name":"ANNOVAR:nonframeshift deletion","type":"exact"},{"name":"Jannovar:inframe_deletion","type":"exact"},{"name":"VAT:deletionNFS","type":"exact"},{"name":"VEP:inframe_deletion","type":"exact"},{"name":"inframe codon loss","type":"related"},{"name":"inframe decrease in CDS length","type":"exact"},{"name":"inframe deletion","type":"related"},{"name":"inframe_codon_loss","type":"exact"},{"name":"snpEff:CODON_DELETION","type":"related"}],"termid":"SO:0001822"}


id: MONDO:0044349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hemoglobinopathy that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobinopathy","termid":"MONDO:0044348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired hemoglobinopathy","secondary_identifiers":["MEDGEN:688237","SCTID:127039000","UMLS:C1263995"],"synonyms":[{"name":"acquired hemoglobinopathy","type":"exact"}],"termid":"MONDO:0044349","xrefs":{"Monarch":{"xref_id":"0044349"}}}


id: SO:0001701
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone modification site where the modification is the methylation of the residue.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_modification","termid":"SO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_methylation_site","synonyms":[{"name":"histone methylation","type":"exact"},{"name":"histone methylation site","type":"exact"}],"termid":"SO:0001701"}


id: PBO:0018021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-U ortholog Mis17","termid":"PBO:0018021"}


id: MONDO:0014590
data:
  {"annotated_genes":["SJAG_00826"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87087],"is_not":false,"summary":null,"term":"MONDO:0014590"}]},"cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the SNAP25 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00826":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16091","MEDGEN:906793","UMLS:C4225364","OMIM:616330","DOID:0110683"],"synonyms":[{"name":"CMS18","type":"exact"},{"name":"SNAP25 congenital myasthenic syndrome","type":"exact"},{"name":"SNAP25-DEE","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in SNAP25","type":"exact"},{"name":"congenital myasthenic syndrome type 18","type":"exact"},{"name":"myasthenic syndrome, congenital, 18","type":"exact"},{"name":"myasthenic syndrome, congenital, 18, with intellectual disability and ataxia","type":"exact"},{"name":"myasthenic syndrome, congenital, type 18","type":"exact"}],"termid":"MONDO:0014590","terms_by_termid":{"MONDO:0014590":null},"xrefs":{"Monarch":{"xref_id":"0014590"}}}


id: PBO:0049075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 101","termid":"PBO:0049075"}


id: GO:1902895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microRNA (miRNA) gene transcription.","definition_xrefs":["GOC:dph","GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:24699545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of miRNA transcription","termid":"GO:1902893"},{"relation_name":"is_a","term_name":"positive regulation of miRNA metabolic process","termid":"GO:2000630"},{"relation_name":"positively_regulates","term_name":"miRNA transcription","termid":"GO:0061614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"positive regulation of miRNA transcription","synonyms":[{"name":"activation of pri-miRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of microRNA gene transcription","type":"exact"},{"name":"positive regulation of pri-miRNA gene transcription","type":"exact"},{"name":"positive regulation of pri-miRNA transcription by RNA polymerase II","type":"exact"},{"name":"positive regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of primary miRNA gene transcription","type":"exact"},{"name":"up regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1902895"}


id: PBO:0077284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM26 antisense RNA 1","termid":"PBO:0077284"}


id: GO:0120306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of perturbations or damage to the actin cytoskeleton.","definition_xrefs":["GOC:krc","PMID:32915139","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to actin cytoskeletal stress","references_by_uniquename":{"PMID:32915139":null},"secondary_identifiers":["GO:1903957","GO:1904805","GO:1903956","GO:1904804"],"synonyms":[{"name":"cellular response to actin cytoskeleton stress","type":"exact"},{"name":"cellular response to latrunculin A","type":"narrow"},{"name":"cellular response to latrunculin B","type":"narrow"},{"name":"response to latrunculin A","type":"narrow"},{"name":"response to latrunculin B","type":"narrow"}],"termid":"GO:0120306"}


id: PBO:0054018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1348","termid":"PBO:0054018"}


id: MONDO:0003157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndromes of bone destruction where the cause is not obvious such as neoplasia, infection, or trauma. The destruction follows various patterns: massive (Gorham disease), multicentric (hajdu-cheney syndrome), or carpal/tarsal.","definition_xrefs":["MESH:D010015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disappearing bone disease","secondary_identifiers":["MEDGEN:45247","NANDO:1200878","NANDO:1200880","ICD9:733.09","DOID:4837","UMLS:C0029436","SCTID:240161003"],"synonyms":[{"name":"Gorham's disease","type":"related"},{"name":"Gorham-Stout syndrome","type":"related"},{"name":"essential osteolysis","type":"exact"},{"name":"massive osteolysis","type":"related"},{"name":"phantom bone disease","type":"exact"}],"termid":"MONDO:0003157","xrefs":{"Monarch":{"xref_id":"0003157"}}}


id: GO:0044696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virus causes the death of daughter cells which do not contain its genes after host cell division, by a mechanism of post-segregational killing (PSK). The extrachromosomal viral DNA consist of two genes; the product of the second is long lived and toxic, while the product of the first is short lived and antagonizes the lethal action of the toxin. Daughter cells that do not contain the viral extrachromosomal element are killed by the long lived toxin, while daughter cells that do contain the viral extrachromosomal element are protected by the action of the short lived antitoxin it encodes.","definition_xrefs":["Wikipedia:Toxin-antitoxin_system","PMID:11222604","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated killing of host cell","termid":"GO:0001907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"killing by virus of host cell by post-segregational killing","synonyms":[{"name":"killing by virus of host cell by PSK","type":"exact"},{"name":"killing by virus of host cell by toxin-antitoxin system","type":"exact"}],"termid":"GO:0044696"}


id: GO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response driven by T cell recognition of processed soluble or cell-associated antigens leading to cytokine release and leukocyte activation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"},{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type IV hypersensitivity","secondary_identifiers":["GO:0016069","Wikipedia:Type_IV_hypersensitivity"],"synonyms":[{"name":"delayed hypersensitivity response","type":"exact"},{"name":"delayed-type hypersensitivity","type":"exact"}],"termid":"GO:0001806"}


id: MONDO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Alpers syndrome (obsolete MONDO:0001960)","termid":"MONDO:0001960","xrefs":{"Monarch":{"xref_id":"0001960"}}}


id: PBO:0066389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ like helicase 5","termid":"PBO:0066389"}


id: PR:Q9Y7P4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04417","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein rml2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.15","secondary_identifiers":["UniProtKB:Q9Y7P4"],"synonyms":[{"name":"L2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rplB","type":"exact"}],"termid":"PR:Q9Y7P4"}


id: GO:0043227
data:
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