# terms

id: PBO:0053028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAPTM4A divergent transcript","termid":"PBO:0053028"}


id: FYPO:0001871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype in which cells adhere to other cells of compatible mating type more strongly or to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion","termid":"FYPO:0001872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased agglutination","synonyms":[{"name":"increased agglutination involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0001871"}


id: PBO:0050361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 64","termid":"PBO:0050361"}


id: PBO:0061859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 3","termid":"PBO:0061859"}


id: PBO:0080741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWTR1 intronic transcript 1","termid":"PBO:0080741"}


id: PBO:0067882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 184","termid":"PBO:0067882"}


id: PBO:0053126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCORL pseudogene 1","termid":"PBO:0053126"}


id: MONDO:1012987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Demyelinating disease that occurs in non-human animals.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"demyelinating disease, non-human animal","termid":"MONDO:1012987","xrefs":{"Monarch":{"xref_id":"1012987"}}}


id: GO:0047930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosaminate = 2-dehydro-3-deoxy-D-gluconate + NH3.","definition_xrefs":["EC:4.3.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"glucosaminate ammonia-lyase activity","secondary_identifiers":["MetaCyc:4.3.1.21-RXN","RHEA:12488","GO:0050443"],"synonyms":[{"name":"2-amino-2-deoxy-D-gluconate ammonia-lyase activity","type":"related"},{"name":"2-amino-2-deoxy-D-gluconate hydro-lyase (deaminating) activity","type":"related"},{"name":"D-glucosaminate ammonia-lyase (isomerizing; 2-dehydro-3-deoxy-D-gluconate-forming)","type":"related"},{"name":"D-glucosaminate ammonia-lyase activity","type":"related"},{"name":"D-glucosaminate dehydratase activity","type":"related"},{"name":"D-glucosaminic acid dehydrase activity","type":"related"},{"name":"acetylenemonocarboxylic acid hydrase activity","type":"related"},{"name":"aminodeoxygluconate ammonia-lyase activity","type":"exact"},{"name":"aminodeoxygluconate dehydratase activity","type":"exact"},{"name":"glucosaminic dehydrase activity","type":"related"}],"termid":"GO:0047930"}


id: PBO:0004970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase Gal1","termid":"PBO:0004970"}


id: PBO:0079942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USH2A antisense RNA 1","termid":"PBO:0079942"}


id: FYECO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which linoleic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ linoleic acid","termid":"FYECO:0000050"}


id: MONDO:0008317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteolytic capacity of plasma","secondary_identifiers":["OMIM:176900","UMLS:C1867621","MEDGEN:401269"],"synonyms":[{"name":"proteolytic capacity of plasma","type":"exact"}],"termid":"MONDO:0008317","xrefs":{"Monarch":{"xref_id":"0008317"}}}


id: MONDO:0000261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the pharyngeal tonsil.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonsillitis","termid":"MONDO:0001039"},{"relation_name":"is_a","term_name":"nasopharyngitis","termid":"MONDO:0001040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"adenoiditis","secondary_identifiers":["MEDGEN:507401","UMLS:C0001427","DOID:0050145","ICD9:474.01","SCTID:70020005","ICD10CM:J35.02"],"synonyms":[{"name":"chronic adenoiditis","type":"narrow"},{"name":"inflammation of pharyngeal tonsil","type":"exact"},{"name":"pharyngeal tonsil inflammation","type":"exact"},{"name":"pharyngeal tonsilitis","type":"exact"}],"termid":"MONDO:0000261","xrefs":{"Monarch":{"xref_id":"0000261"}}}


id: PBO:0014265
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae RAD24","termid":"PBO:0014265"}


id: FYPO:0006696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-adenosyl-L-homocysteine (SAH) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular S-adenosyl-L-homocysteine level during vegetative growth","synonyms":[{"name":"decreased S-adenosyl-L-homocysteine accumulation during vegetative growth","type":"related"},{"name":"decreased cellular S-adenosyl-L-homocysteine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular S-adenosylhomocysteine level during vegetative growth","type":"exact"},{"name":"decreased cellular SAH level during vegetative growth","type":"exact"},{"name":"reduced cellular S-adenosyl-L-homocysteine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006696"}


id: PBO:0047494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A pseudogene 2","termid":"PBO:0047494"}


id: MONDO:0019946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ligneous conjunctivitis (obsolete MONDO:0019946)","termid":"MONDO:0019946","xrefs":{"Monarch":{"xref_id":"0019946"}}}


id: RO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aligned_with","termid":"RO:0002001"}


id: PATO:0001441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular adhesivity quality inhering in a molecule in one cell by virtue of the bearer's attachment to an nonidentical molecule in an adjacent cell.","definition_xrefs":["GO:GO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular adhesivity","termid":"PATO:0001531"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterophilic","termid":"PATO:0001441"}


id: GO:0047712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Cypridina luciferin + O2 = oxidized Cypridina luciferin + CO2 + light.","definition_xrefs":["EC:1.13.12.6","MetaCyc:CYPRIDINA-LUCIFERIN-2-MONOOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"Cypridina-luciferin 2-monooxygenase activity","secondary_identifiers":["RHEA:22760"],"synonyms":[{"name":"Cypridina luciferase activity","type":"related"},{"name":"Cypridina-luciferin:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"Cypridina-type luciferase activity","type":"related"},{"name":"luciferase (Cypridina luciferin)","type":"related"},{"name":"luciferase activity","type":"broad"}],"termid":"GO:0047712"}


id: PR:O13783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A programmed cell death 6-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein-sorting protein bro1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.05c","secondary_identifiers":["UniProtKB:O13783"],"synonyms":[{"name":"BRO domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC17G6.05c","type":"related"},{"name":"Spom972h-PDCD6IP","type":"exact"}],"termid":"PR:O13783"}


id: PBO:0054189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1564","termid":"PBO:0054189"}


id: PBO:0005164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec8","termid":"PBO:0005164"}


id: PR:Q9USG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug190 gene.","definition_xrefs":["UniProtKB:Q9USG8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 190 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.06","synonyms":[{"name":"Spom972h-mug190","type":"exact"}],"termid":"PR:Q9USG8"}


id: PBO:0080563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP11 pseudogene 3","termid":"PBO:0080563"}


id: MOD:01902
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-isoleucine residue and an L-serine residue to form L-cysteine oxazole-4-carboxylic acid.","definition_xrefs":["PubMed:21950656","RESID:AA0573","PubMed:21568297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-isoleucine residue","termid":"MOD:02049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine oxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S,2S)-1-amino-2-methylbutyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S,2S)-1-azanyl-2-methylbutyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazole-4-carboxylic acid (Ile-Ser)","type":"exact"},{"name":"L-isoleucine oxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01902"}


id: GO:0001854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3d product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"complement component C3d binding","termid":"GO:0001854"}


id: GO:0061374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillothalamic axonal tract, from its formation to the mature structure. The mammillothalamic tract is the collection of axons that connects the two major subdivisions of the diencephalon (hypothalamus and thalamus) and closes the diencephalic circuit.","definition_xrefs":["GOC:yaf","GOC:dph","PMID:10662642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary axonal complex development","termid":"GO:0061373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillothalamic axonal tract development","termid":"GO:0061374"}


id: GO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH.","definition_xrefs":["PMID:10512869"],"gene_count":0,"genotype_count":0,"name":"obsolete peripheral to membrane of membrane fraction (obsolete GO:0000300)","synonyms":[{"name":"peripheral to membrane of membrane fraction","type":"exact"}],"termid":"GO:0000300"}


id: GO:0004026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an alcohol = CoA + an acetyl ester.","definition_xrefs":["EC:2.3.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"},{"relation_name":"is_a","term_name":"alcohol O-acyltransferase activity","termid":"GO:0034318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"alcohol O-acetyltransferase activity","secondary_identifiers":["MetaCyc:ALCOHOL-O-ACETYLTRANSFERASE-RXN","RHEA:17229"],"synonyms":[{"name":"AATASE activity","type":"related"},{"name":"acetyl-CoA:alcohol O-acetyltransferase activity","type":"related"},{"name":"alcohol acetyltransferase activity","type":"related"}],"termid":"GO:0004026"}


id: PBO:0066622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC3 acetylcholine receptor chaperone","termid":"PBO:0066622"}


id: MONDO:0016237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diffuse neonatal hemangiomatosis is a rare vascular tumor from unknown origin characterized by multiple, progressive, rapidly growing cutaneous hemangiomas (e.g. in the scalp, face, trunk and extremities) associated with widespread visceral hemangiomas in the liver, lungs, gastrointestinal tract, brain, and meninges.","definition_xrefs":["Orphanet:2123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse neonatal hemangiomatosis","secondary_identifiers":["UMLS:C0474965","MEDGEN:96888","GARD:1861","SCTID:254782003"],"termid":"MONDO:0016237","xrefs":{"Monarch":{"xref_id":"0016237"}}}


id: FYPO:0006530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is abolished during prophase of the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to centromere during meiotic prophase II","synonyms":[{"name":"abolished protein localisation to centromere during meiotic prophase II","type":"exact"},{"name":"abolished protein localisation to centromere during prophase II","type":"exact"},{"name":"abolished protein localization to chromosome, centric region during meiotic prophase II","type":"exact"},{"name":"abolished protein localization to chromosome, centromeric region during meiotic prophase II","type":"exact"},{"name":"protein localization to centromere abolished during meiotic prophase II","type":"exact"}],"termid":"FYPO:0006530"}


id: PBO:0031066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_normal,_unseptated_germ_tube_morphology","termid":"PBO:0031066"}


id: PBO:0024823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ath1 complex protein Ath2 nuclease, XP-G family (predicted)","termid":"PBO:0024823"}


id: MONDO:1010857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Krabbe disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease, non-human animal","termid":"MONDO:1010170"},{"relation_name":"is_a","term_name":"leukodystrophy, sheep","termid":"MONDO:1011006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Krabbe disease, sheep","secondary_identifiers":["OMIA:000578-9940"],"termid":"MONDO:1010857","xrefs":{"Monarch":{"xref_id":"1010857"}}}


id: PBO:0065845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 1","termid":"PBO:0065845"}


id: PBO:0067296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 381, pseudogene","termid":"PBO:0067296"}


id: MOD:01117
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentamethyldihydrobenzofuransulfonyl","synonyms":[{"name":"Pbf","type":"exact"}],"termid":"MOD:01117"}


id: PBO:0065827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6B, member RAS oncogene family","termid":"PBO:0065827"}


id: FYPO:0005445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the length of the single-stranded telomeric 3' overhang is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:17429064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"part_of","term_name":"normal telomere structure during vegetative growth","termid":"FYPO:0002155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal telomere 3' overhang length during vegetative growth","synonyms":[{"name":"normal telomere 3' overhang length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005445"}


id: PBO:0040077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin domain containing 4","termid":"PBO:0040077"}


id: MOD:01835
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 5x(13)C-labeled L-methionine sulfone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfone","termid":"MOD:00256"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled L-methionine sulfone","termid":"MOD:01835"}


id: MONDO:0016872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 7 disorder","termid":"MONDO:0700014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 7","secondary_identifiers":["Orphanet:261796","GARD:20795","MEDGEN:1825962","UMLS:C5679655"],"synonyms":[{"name":"partial deletion of chromosome type 7","type":"exact"},{"name":"partial monosomy of chromosome 7","type":"exact"}],"termid":"MONDO:0016872","xrefs":{"Monarch":{"xref_id":"0016872"}}}


id: PATO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A strength which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"strength","termid":"PATO:0001230"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased strength","synonyms":[{"name":"high strength","type":"exact"}],"termid":"PATO:0001778"}


id: GO:0044864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process where an infecting virus activates or increases the frequency, rate or extent of its host's cell division.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by virus of host cell division (obsolete GO:0044864)","termid":"GO:0044864"}


id: FYPO:0007243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell polarity phenotype in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is normal (i.e. indistinguishable from wild type) in one, and premature in the other, of the daughter cells formed as a result of the division of a mother cell in which NETO did not occurs. NETO is normal in the daughter cell that inherits the parent cell's old end, and begins earlier than normal in the daughter cell that inherits parent cell's new end. Normally, growth begins at the old end and then becomes bipolar with similar timing in both daughter cells.","definition_xrefs":["PMID:31719163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO in daughter cells","termid":"FYPO:0007240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005568"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005568"],"is_obsolete":false,"name":"normal NETO in cell derived from growing end and premature NETO in cell derived from non-growing end","synonyms":[{"name":"normal NETO in cell derived from growing end and premature NETO in cell derived from non-growing end during mitotic cell cycle","type":"related"},{"name":"normal NETO in cell derived from growing end and premature NETO in cell derived from non-growing end during vegetative growth","type":"exact"},{"name":"normal activation of bipolar cell growth in cell derived from growing end and premature activation of bipolar cell growth in cell derived from non-growing end","type":"related"},{"name":"normal cell growth mode switching, monopolar to bipolar in cell derived from growing end and premature cell growth mode switching, monopolar to bipolar in cell derived from non-growing end","type":"exact"},{"name":"normal new end take-off in cell derived from growing end and premature NETO in cell derived from non-growing end","type":"exact"},{"name":"normal switch from monopolar to bipolar cell growth in cell derived from growing end and premature switch from monopolar to bipolar cell growth in cell derived from non-growing end","type":"exact"}],"termid":"FYPO:0007243"}


id: PR:P40921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.02c gene.","definition_xrefs":["UniProtKB:P40921","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.02c","synonyms":[{"name":"EF-1-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC29A4.02c","type":"exact"},{"name":"eEF-1B gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40921"}


id: FYECO:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The expression level of the gene was increased compared to expressing it from its endogenous promoter in the genome.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000007 overexpression (obsolete FYECO:0000007)","termid":"FYECO:0000007"}


id: MONDO:0012153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease 9","secondary_identifiers":["MESH:C563834","UMLS:C4282179","DOID:0111364","OMIM:608907","MEDGEN:924255"],"synonyms":[{"name":"AD9","type":"exact"},{"name":"Alzheimer disease 9","type":"exact"},{"name":"Alzheimer disease 9, late-onset","type":"related"},{"name":"Alzheimer disease 9, susceptibility to","type":"related"}],"termid":"MONDO:0012153","xrefs":{"Monarch":{"xref_id":"0012153"}}}


id: PBO:0056309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 4 pseudogene 1","termid":"PBO:0056309"}


id: PR:P00046
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c, somatic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04793","PANTHER:PTHR11961:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.07","secondary_identifiers":["UniProtKB:P00046"],"synonyms":[{"name":"Spom972h-CYCS","type":"exact"}],"termid":"PR:P00046"}


id: PBO:0071407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 13","termid":"PBO:0071407"}


id: FYECO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sorbitol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ sorbitol","termid":"FYECO:0000025"}


id: MONDO:0970957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of extramedullary conus region spinal cord lipoma characterized by its location, extending from the poorly delineated tip of the conus.","definition_xrefs":["Orphanet:645288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extramedullary conus spinal cord lipoma","termid":"MONDO:0968987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"terminal extramedullary conus spinal cord lipoma","secondary_identifiers":["UMLS:C5816727","MEDGEN:1853126"],"termid":"MONDO:0970957","xrefs":{"Monarch":{"xref_id":"0970957"}}}


id: MONDO:0022057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow growing, locally invasive neoplasm arising from tooth-forming tissues. It most often grows intraosseously in the mandible and less frequently in the maxilla. In a minority of cases it grows extraosseously in the gingiva. It is characterized by the presence of a fibrous stroma, epithelial cells with abundant eosinophilic cytoplasm, and amyloid material which is often calcified. Small tumors may be successfully treated with enucleation. Local resection is usually required for larger tumors. Recurrences have been reported in a minority of cases.","definition_xrefs":["NCIT:C54301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"calcifying epithelial odontogenic tumor","secondary_identifiers":["MESH:C537961","MEDGEN:87266","ICDO:9340/0","UMLS:C0334574"],"synonyms":[{"name":"CEOT","type":"related"},{"name":"Pindborg tumor","type":"exact"},{"name":"Pindborg tumour","type":"exact"},{"name":"calcifying epithelial odontogenic tumor","type":"exact"}],"termid":"MONDO:0022057","xrefs":{"Monarch":{"xref_id":"0022057"}}}


id: MONDO:1011073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in Francois's langur.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, Francois's langur","secondary_identifiers":["OMIA:001033-54180"],"termid":"MONDO:1011073","xrefs":{"Monarch":{"xref_id":"1011073"}}}


id: GO:0098924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by nitric oxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling by soluble gas","termid":"GO:0098923"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by nitric oxide","termid":"GO:0099548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by nitric oxide","termid":"GO:0098924"}


id: GO:0170045
data:
  {"annotated_genes":["SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102151],"is_not":false,"summary":null,"term":"GO:0170045"}]},"cv_name":"molecular_function","definition":"Enables the transfer of isopentenyl pyrophosphate from one side of a membrane to the other.","definition_xrefs":["GOC:ew","PMID:37813972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"isopentenyl pyrophosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IPP transmembrane transport activity","type":"exact"},{"name":"isopentenyl diphosphate transmembrane transport activity","type":"exact"}],"termid":"GO:0170045","terms_by_termid":{"GO:0170045":null}}


id: PBO:0027271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_5_residues_during_vegetative_growth","termid":"PBO:0027271"}


id: PBO:0090571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1/Yta4","termid":"PBO:0090571"}


id: PBO:0070790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 20","termid":"PBO:0070790"}


id: GO:1901336
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lactone anabolism","type":"exact"},{"name":"lactone biosynthesis","type":"exact"},{"name":"lactone formation","type":"exact"},{"name":"lactone synthesis","type":"exact"}],"termid":"GO:1901336","terms_by_termid":{"GO:0070485":null}}


id: GO:1905617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of miRNA-mediated gene silencing by inhibition of translation.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","PMID:23409027","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of miRNA-mediated gene silencing by inhibition of translation (obsolete GO:1905617)","synonyms":[{"name":"down regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"down regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"down regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"down regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"down regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"down-regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"down-regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"down-regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"down-regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"down-regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"downregulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"downregulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"downregulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"downregulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"downregulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"inhibition of down regulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of down-regulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of downregulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of gene silencing by miRNA, negative regulation of translation","type":"narrow"},{"name":"inhibition of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of miRNA mediated inhibition of translation","type":"narrow"},{"name":"inhibition of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"inhibition of negative regulation of translation involved in gene silencing by microRNA","type":"narrow"},{"name":"negative regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"negative regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"negative regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"negative regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"negative regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"negative regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"negative regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"negative regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:1905617"}


id: PATO:0000442
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep pattern quality inhering in a bearer by virtue of the bearer's inability to sleep.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000442 insomnia (obsolete PATO:0000442)","termid":"PATO:0000442"}


id: MONDO:1011435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Becker type muscular dystrophy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Becker type muscular dystrophy, non-human animal","secondary_identifiers":["OMIA:001888"],"termid":"MONDO:1011435","xrefs":{"Monarch":{"xref_id":"1011435"}}}


id: MOD:01773
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a trimethyllysine residue with secondary loss of a neutral trimethylamine molecular fragment.","definition_xrefs":["PubMed:18688235","PubMed:17205979"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N6,N6,N6-trimethyl-L-lysine","termid":"MOD:00083"},{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6,N6,N6-trimethyl-L-lysine with neutral loss of trimethylamine","synonyms":[{"name":"dMe3N6Me3+Lys","type":"exact"}],"termid":"MOD:01773"}


id: PBO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide B","termid":"PBO:0061295"}


id: MONDO:1010577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, pig","secondary_identifiers":["OMIA:000279-9823"],"termid":"MONDO:1010577","xrefs":{"Monarch":{"xref_id":"1010577"}}}


id: PBO:0060540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuron navigator 2","termid":"PBO:0060540"}


id: PBO:0011429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Tgs1 (predicted)","termid":"PBO:0011429"}


id: PBO:0057715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-1","termid":"PBO:0057715"}


id: PBO:0058843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8072","termid":"PBO:0058843"}


id: PBO:0034223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-participates_in_a_abiotic-biotic_interaction_with","termid":"PBO:0034223"}


id: PBO:0043159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 27","termid":"PBO:0043159"}


id: MONDO:0008753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metabolic disease characterized by the accumulation of homogentisic acid (HGA) and its oxidized product, benzoquinone acetic acid (BQA), in various tissues (e.g. cartilage, connective tissue) and body fluids (urine, sweat), causing urine to darken when exposed to air as well as grey-blue coloration of the sclera and ear helix (ochronosis), and a disabling joint disease involving both the axial and peripheral joints (ochronotic arthropathy).","definition_xrefs":["Orphanet:56"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"obsolete pigmented conjunctival lesion (obsolete MONDO:0020203)","termid":"MONDO:0020203"},{"relation_name":"is_a","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"alkaptonuria","secondary_identifiers":["DOID:9270","ICD9:270.2","UMLS:C0002066","NORD:750","MESH:D000474","NANDO:2200504","MedDRA:10001689","icd11.foundation:1761652827","NCIT:C84546","SCTID:360378009","GARD:5775","MEDGEN:1413","OMIM:203500"],"synonyms":[{"name":"aku","type":"related"},{"name":"alcaptonuria","type":"exact"},{"name":"alkaptonuria","type":"exact"},{"name":"alkaptonuric ochronosis","type":"related"},{"name":"deficiency of homogentisicase","type":"related"},{"name":"hereditary ochronosis","type":"exact"},{"name":"homogentisate 1,2-dioxygenase deficiency","type":"exact"},{"name":"homogentisic acid oxidase deficiency","type":"exact"},{"name":"homogentisic acidura","type":"related"},{"name":"ochronosis, hereditary","type":"related"}],"termid":"MONDO:0008753","xrefs":{"Monarch":{"xref_id":"0008753"}}}


id: MONDO:0006116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A header term that includes the following breast carcinoma subtypes determined by gene expression profiling: luminal A breast carcinoma, luminal B breast carcinoma, HER2 positive breast carcinoma, basal-like breast carcinoma, triple-negative breast carcinoma, and normal breast-like subtype of breast carcinoma.","definition_xrefs":["NCIT:C53553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast carcinoma by gene expression profile","secondary_identifiers":["UMLS:C3642344","EFO:1000143","MEDGEN:770984"],"synonyms":[{"name":"breast carcinoma by gene expression profile","type":"exact"}],"termid":"MONDO:0006116","xrefs":{"Monarch":{"xref_id":"0006116"}}}


id: GO:0004366
data:
  {"annotated_genes":["SJAG_02654","SJAG_03305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71842,72306],"is_not":false,"summary":null,"term":"GO:0004366"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-CoA + sn-glycerol 3-phosphate = a 1-acyl-sn-glycero-3-phosphate + CoA.","definition_xrefs":["RHEA:15325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02654":null,"SJAG_03305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.3.1.15","Reactome:R-HSA-1482695","Reactome:R-HSA-549112","Reactome:R-HSA-75886","MetaCyc:RXN-1381"],"synonyms":[{"name":"3-glycerophosphate acyltransferase activity","type":"related"},{"name":"ACP:sn-glycerol-3-phosphate acyltransferase activity","type":"related"},{"name":"acyl-CoA:sn-glycerol-3-phosphate 1-O-acyltransferase activity","type":"related"},{"name":"alpha-glycerophosphate acyltransferase activity","type":"related"},{"name":"glycerol 3-phosphate acyltransferase activity","type":"related"},{"name":"glycerol phosphate acyltransferase activity","type":"related"},{"name":"glycerol phosphate transacylase activity","type":"related"},{"name":"glycerophosphate acyltransferase activity","type":"related"},{"name":"glycerophosphate transacylase activity","type":"related"},{"name":"sn-glycerol 3-phosphate acyltransferase activity","type":"related"},{"name":"sn-glycerol-3-phosphate acyltransferase activity","type":"related"}],"termid":"GO:0004366","terms_by_termid":{"GO:0004366":null}}


id: MONDO:0005557
data:
  {"annotated_genes":["SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010926"}]},"cv_name":"mondo","definition":"Disorders in the processing of calcium in the body: its absorption, transport, storage, and utilization.","definition_xrefs":["MESH:D002128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"calcium metabolic disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:275.4","ICD9:275.49","MEDGEN:714","DOID:10575","EFO:0005769","ICD9:275.40","SCTID:71638002","UMLS:C0006705"],"synonyms":[{"name":"calcium metabolism disease","type":"related"},{"name":"calcium metabolism disorder","type":"related"},{"name":"disorder of calcium metabolism","type":"exact"}],"termid":"MONDO:0005557","terms_by_termid":{"MONDO:0010926":null},"xrefs":{"Monarch":{"xref_id":"0005557"}}}


id: MONDO:0015966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary eye tumor (obsolete MONDO:0015966)","secondary_identifiers":["Orphanet:183619"],"synonyms":[{"name":"genetic eye tumor","type":"related"}],"termid":"MONDO:0015966","xrefs":{"Monarch":{"xref_id":"0015966"}}}


id: GO:0141088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont initiates, promotes, or enhances the activation of autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated activation of host autophagy (obsolete GO:0141088)","synonyms":[{"name":"induction of host autophagy","type":"exact"},{"name":"positive regulation by symbiont of host autophagy","type":"exact"}],"termid":"GO:0141088"}


id: MONDO:0020595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the retroperitoneal space.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete disorder of retroperitoneum (obsolete MONDO:0020595)","secondary_identifiers":["NCIT:C27667","SCTID:734045002"],"synonyms":[{"name":"disease of retroperitoneal space","type":"exact"},{"name":"disease or disorder of retroperitoneal space","type":"exact"},{"name":"disorder of retroperitoneal space","type":"exact"},{"name":"retroperitoneal disease","type":"exact"},{"name":"retroperitoneal disorder","type":"exact"},{"name":"retroperitoneal space disease","type":"exact"},{"name":"retroperitoneal space disease or disorder","type":"exact"}],"termid":"MONDO:0020595","xrefs":{"Monarch":{"xref_id":"0020595"}}}


id: MONDO:0015045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-heavy chain disease (alpha-HCD) is a type of HCD characterized by the production of incomplete monoclonal alpha-heavy chains without associated light chains. Alpha-HCD is considered to be a subtype of immunoproliferative small intestinal disease (IPSID). The clinical presentation includes chronic diarrhea with evidence of malabsorption.","definition_xrefs":["Orphanet:100025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heavy chain disease","termid":"MONDO:0019464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"alpha-heavy chain disease","secondary_identifiers":["UMLS:C0021071","icd11.foundation:680227490","DOID:0060126","MEDGEN:7039","GARD:19742","MESH:D007161","ICDO:9760/3","NCIT:C3132","ICDO:9764/3"],"synonyms":[{"name":"Alpha heavy chain disease","type":"exact"},{"name":"Alpha-HCD","type":"exact"},{"name":"IPSID","type":"exact"},{"name":"Immunoproliferative small intestinal disease","type":"exact"},{"name":"Mediterranean abdominal lymphoma","type":"exact"},{"name":"Mediterranean lymphoma","type":"exact"},{"name":"Mediterraneanl lymphoma","type":"exact"},{"name":"Seligmann's disease","type":"related"},{"name":"alpha chain disease","type":"exact"}],"termid":"MONDO:0015045","xrefs":{"Monarch":{"xref_id":"0015045"}}}


id: PBO:0089353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex actin-related protein subunit Arp2","termid":"PBO:0089353"}


id: GO:1902523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein K63-linked ubiquitination.","definition_xrefs":["PMID:21931591","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein K63-linked ubiquitination","termid":"GO:1900044"},{"relation_name":"is_a","term_name":"positive regulation of protein polyubiquitination","termid":"GO:1902916"},{"relation_name":"positively_regulates","term_name":"protein K63-linked ubiquitination","termid":"GO:0070534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein K63-linked ubiquitination","synonyms":[{"name":"activation of protein K63-linked polyubiquitination","type":"narrow"},{"name":"activation of protein K63-linked ubiquitination","type":"narrow"},{"name":"positive regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"up regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"up regulation of protein K63-linked ubiquitination","type":"exact"},{"name":"up-regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"up-regulation of protein K63-linked ubiquitination","type":"exact"},{"name":"upregulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"upregulation of protein K63-linked ubiquitination","type":"exact"}],"termid":"GO:1902523"}


id: PBO:0039806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 2, pseudogene","termid":"PBO:0039806"}


id: SO:0000731
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that is incomplete.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragmentary","synonyms":[{"name":"fragment","type":"exact"}],"termid":"SO:0000731"}


id: PBO:0047346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrosin","termid":"PBO:0047346"}


id: PBO:0056814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 6 like","termid":"PBO:0056814"}


id: PBO:0028870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_poly(A)_tail_length","termid":"PBO:0028870"}


id: PBO:0067439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 560, pseudogene","termid":"PBO:0067439"}


id: GO:0031838
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the stable binding of a haptoglobin to hemoglobin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"haptoglobin-hemoglobin complex","termid":"GO:0031838"}


id: GO:0031644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a neurophysiological process, an organ system process carried out by any of the organs or tissues of the nervous system.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nervous system process","synonyms":[{"name":"regulation of neurological process","type":"exact"},{"name":"regulation of neurological system process","type":"exact"},{"name":"regulation of neurophysiological process","type":"exact"}],"termid":"GO:0031644"}


id: PR:O14355
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30D10.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C30D10.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.09c","synonyms":[{"name":"Spom972h-SPBC30D10.09c","type":"exact"}],"termid":"PR:O14355"}


id: GO:0008377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the detection of light triggers the release of internally sequestered calcium ions.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete light-induced release of internally sequestered calcium ion (obsolete GO:0008377)","synonyms":[{"name":"light-induced release of calcium from internal store","type":"exact"},{"name":"light-induced release of internally sequestered calcium ion (Ca2+)","type":"exact"},{"name":"light-induced release of internally stored calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0008377"}


id: GO:0031894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a V1A vasopressin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin receptor binding","termid":"GO:0031893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"V1A vasopressin receptor binding","synonyms":[{"name":"V1A vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031894"}


id: PBO:0004221
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago Nashi Interacting protein","termid":"PBO:0004221"}


id: MONDO:0006890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign tumor arising from the parenchymal cells of the parathyroid glands. In the vast majority of cases, the tumor involves a single parathyroid gland. It is associated with the symptoms of primary hyperparathyroidism, resulting from the excessive production of parathyroid hormone. It is usually surrounded by a well-defined capsule. Capsular invasion, vascular invasion, and perineural invasion are absent.","definition_xrefs":["NCIT:C3916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign neoplasm of parathyroid gland","termid":"MONDO:0021463"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid gland adenoma","secondary_identifiers":["SCTID:128474007","NCIT:C156757","MEDGEN:75502","HP:0002897","UMLS:C0262587","EFO:1001087","MedDRA:10033940","DOID:7608"],"synonyms":[{"name":"adenoma of parathyroid","type":"exact"},{"name":"adenoma of parathyroid gland","type":"exact"},{"name":"adenoma of the parathyroid","type":"exact"},{"name":"adenoma of the parathyroid gland","type":"exact"},{"name":"parathyroid adenoma","type":"exact"},{"name":"parathyroid gland adenoma","type":"exact"}],"termid":"MONDO:0006890","xrefs":{"Monarch":{"xref_id":"0006890"}}}


id: PBO:0086525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YBR292C is not an essential gene","termid":"PBO:0086525"}


id: PBO:0087838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Third-largest subunit of DNA polymerase II (DNA polymerase epsilon); required to maintain fidelity of chromosomal replication and also for inheritance of telomeric silencing; stabilizes the interaction of Pol epsilon with primer-template DNA, positively affecting the processivity of the polymerase and exonuclease activities of Pol epsilon; mRNA abundance peaks at the G1/S boundary of the cell cycle; DPB3 has a paralog, DLS1, that arose from the whole genome duplication","termid":"PBO:0087838"}


id: PBO:0091078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoglycolate hydrolase","termid":"PBO:0091078"}


id: PBO:0028591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_heat","termid":"PBO:0028591"}


id: GO:0034491
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"}]},"cv_name":"biological_process","definition":"The directed movement of neutral amino acids into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"amino acid transmembrane import into vacuole","termid":"GO:0032975"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"neutral amino acid transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034491","terms_by_termid":{"GO:0090516":null}}


id: PBO:0061493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nik related kinase","termid":"PBO:0061493"}


id: PR:C6Y4C5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl2 gene.","definition_xrefs":["UniProtKB:C6Y4C5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.16c","synonyms":[{"name":"Spom972h-ecl2","type":"exact"}],"termid":"PR:C6Y4C5"}


id: GO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. High molecular weight (100-300 kDa) proteins that associate with intermediate filaments to cross-link them into loose networks.","definition_xrefs":["PMID:9484600","GOC:ajp"],"gene_count":0,"genotype_count":0,"name":"obsolete type II intermediate filament associated protein (obsolete GO:0001723)","synonyms":[{"name":"type II intermediate filament associated protein","type":"exact"}],"termid":"GO:0001723"}


id: PBO:0066718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 15","termid":"PBO:0066718"}


id: PBO:0046089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2","termid":"PBO:0046089"}


id: PBO:0027999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spherical_vegetative_cell","termid":"PBO:0027999"}


id: GO:1904904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell-matrix adhesion via fibronectin.","definition_xrefs":["GOC:BHF","GOC:bc","GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","PMID:19460962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-matrix adhesion","termid":"GO:0001952"},{"relation_name":"regulates","term_name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of endothelial cell-matrix adhesion via fibronectin","termid":"GO:1904904"}


id: FYPO:0004732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer astral microtubules than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0002399","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"astral microtubules present in decreased numbers","synonyms":[{"name":"astral microtubules present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"astral microtubules present in decreased numbers during vegetative growth","type":"exact"},{"name":"astral microtubules present in reduced numbers","type":"exact"},{"name":"decreased level of astral microtubules","type":"exact"},{"name":"reduced number of astral microtubules","type":"exact"}],"termid":"FYPO:0004732"}


id: GO:0060015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become granulosa cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"granulosa cell differentiation","termid":"GO:0060014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell fate commitment","termid":"GO:0060015"}


id: PBO:0065816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4A antisense RNA 1","termid":"PBO:0065816"}


id: PR:O60164
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pescadillo that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12221:SF6","OMA:SCHPO03820","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.05c","secondary_identifiers":["UniProtKB:O60164"],"synonyms":[{"name":"Spom972h-PES1","type":"exact"},{"name":"nucleolar protein 7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60164"}


id: PBO:0058657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6785","termid":"PBO:0058657"}


id: PBO:0061611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NudC domain containing 2","termid":"PBO:0061611"}


id: GO:0051230
data:
  {"annotated_genes":["SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"}]},"cv_name":"biological_process","definition":"The controlled breakdown of the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"spindle disassembly","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"spindle breakdown","type":"exact"},{"name":"spindle catabolism","type":"exact"},{"name":"spindle degradation","type":"exact"}],"termid":"GO:0051230","terms_by_termid":{"GO:0051228":null}}


id: GO:0033626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation by cell surface receptor linked signal transduction. This can occur by increased affinity of an integrin for its extracellular ligands.","definition_xrefs":["PMID:14754902","PMID:12213832","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"positive regulation of integrin activation","termid":"GO:0033625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0023052","GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin activation by cell surface receptor linked signal transduction","synonyms":[{"name":"cell surface receptor linked signal transduction leading to integrin activation","type":"exact"},{"name":"cell surface receptor linked signal transduction leading to integrin complex activation","type":"exact"}],"termid":"GO:0033626"}


id: PBO:0063138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvin gamma","termid":"PBO:0063138"}


id: PBO:0063558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pellino E3 ubiquitin protein ligase family member 2","termid":"PBO:0063558"}


id: PBO:0028900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0028900"}


id: PBO:0030774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_hydrogen_peroxide","termid":"PBO:0030774"}


id: PBO:0067780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 80","termid":"PBO:0067780"}


id: GO:0062045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + pyruvate= epsilon-amino-alpha-ketocaproic acid (KAC) + alanine.","definition_xrefs":["PMID:28330936","PMID:27758894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-lysine alpha-aminotransferase","termid":"GO:0062045"}


id: GO:0060213
data:
  {"annotated_genes":["SJAG_01436","SJAG_00686","SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74510,91542,106855],"is_not":false,"summary":null,"term":"GO:0060213"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA poly(A) tail shortening","termid":"GO:0060211"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"positively_regulates","term_name":"nuclear-transcribed mRNA poly(A) tail shortening","termid":"GO:0000289"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_01436":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclear-transcribed mRNA poly(A) tail shortening","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of 3' to 5' mRNA deadenylation","type":"related"},{"name":"positive regulation of mRNA deadenylation","type":"related"},{"name":"positive regulation of nuclear mRNA poly(A) tail shortening","type":"related"}],"termid":"GO:0060213","terms_by_termid":{"GO:0060213":null}}


id: PBO:0053451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 399","termid":"PBO:0053451"}


id: PBO:0064906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 regulatory subunit B, beta","termid":"PBO:0064906"}


id: MONDO:0008418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic sclerosis","termid":"MONDO:0005100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"scleroderma, familial progressive","secondary_identifiers":["MEDGEN:356661","OMIM:181750","UMLS:C1866983"],"synonyms":[{"name":"Crest syndrome","type":"related"},{"name":"scleroderma, familial progressive","type":"exact"},{"name":"systemic sclerosis, susceptibility to","type":"related"}],"termid":"MONDO:0008418","xrefs":{"Monarch":{"xref_id":"0008418"}}}


id: SO:0001609
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An elongation of a polypeptide sequence deriving from a sequence variant extending the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_polypeptide","synonyms":[{"name":"elongated polypeptide","type":"exact"}],"termid":"SO:0001609"}


id: MONDO:0011096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Agammaglobulinemia, non-Bruton type (autosomal agammaglobulinemia) is a rare form of agammaglobulinemia, a primary immunodeficiency disease, and is characterized by variable immune dysfunction with frequent and recurrent bacterial infections and/or chronic diarrhea.","definition_xrefs":["Orphanet:33110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated agammaglobulinemia","termid":"MONDO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"autosomal agammaglobulinemia","secondary_identifiers":["MEDGEN:316941","UMLS:C1832241","GARD:9640","MESH:C538056"],"synonyms":[{"name":"AGM","type":"exact"},{"name":"agammaglobulinemia, autosomal recessive, due to IGHM defect","type":"related"},{"name":"agammaglobulinemia, non-Bruton type","type":"exact"}],"termid":"MONDO:0011096","xrefs":{"Monarch":{"xref_id":"0011096"}}}


id: FYPO:0004161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to regions of chromatin containing genes that can be transcribed by RNA polymerase II is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II-transcribed genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at polymerase II transcribed genes during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","type":"exact"}],"termid":"FYPO:0004161"}


id: MONDO:0016706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, slow-growing neuroepithelial neoplasm of uncertain origin affecting adults. It is located in the third ventricle. It is characterized by the presence of epithelioid cells which express GFAP, and mucinous stroma which contains lymphoplasmacytic infiltrates.","definition_xrefs":["NCIT:C5592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"diencephalic cancer","termid":"MONDO:0002786"},{"relation_name":"is_a","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"grade II glioma","termid":"MONDO:0021639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"chordoid glioma of the third ventricle","secondary_identifiers":["UMLS:C1322252","DOID:3773","ICDO:9444/1","Orphanet:251674","GARD:20715","SCTID:715900001","MEDGEN:232956","DOID:3774","ONCOTREE:CHGL"],"synonyms":[{"name":"chordoid glioma","type":"exact"},{"name":"chordoid glioma (morphologic abnormality)","type":"exact"},{"name":"chordoid glioma of 3rd ventricle","type":"exact"},{"name":"chordoid glioma of the 3rd ventricle","type":"exact"},{"name":"chordoid glioma of the third ventricle","type":"exact"},{"name":"chordoid glioma of the third ventricle (WHO grade II)","type":"exact"},{"name":"chordoid glioma of third ventricle","type":"exact"},{"name":"third ventricle chordoid glioma","type":"exact"}],"termid":"MONDO:0016706","xrefs":{"Monarch":{"xref_id":"0016706"}}}


id: GO:0015247
data:
  {"annotated_genes":["SJAG_05209","SJAG_02516","SJAG_03050","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74137,76531],"is_not":false,"summary":null,"term":"GO:0015247"},{"annotations":[114488,101378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"}]},"cv_name":"molecular_function","definition":"Enables the transfer of aminophospholipids from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP. Aminophospholipids contain phosphoric acid as a mono- or diester and an amino (NH2) group.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"flippase activity","termid":"GO:0140327"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01945":null,"SJAG_02516":null,"SJAG_03050":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0005215","GO:0140303","GO:0003674"],"is_obsolete":false,"name":"aminophospholipid flippase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"aminophospholipid transmembrane transporter activity","type":"related"},{"name":"aminophospholipid transporter activity","type":"related"}],"termid":"GO:0015247","terms_by_termid":{"GO:0015247":null,"GO:0140346":null}}


id: GO:0033175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. All non-F1 subunits of the chloroplast hydrogen-transporting ATP synthase, including integral and peripheral chloroplast thylakoid membrane proteins.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast proton-transporting ATP synthase complex, coupling factor CF(o) (obsolete GO:0033175)","synonyms":[{"name":"chloroplast proton-transporting ATP synthase complex, coupling factor CF(0)","type":"exact"},{"name":"chloroplast proton-transporting F-type ATPase complex, coupling factor CF(o)","type":"exact"}],"termid":"GO:0033175"}


id: MONDO:0034028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Symptomatic form of hemochromatosis type 1 is a rare, hereditary hemochromatosis characterized by inappropriately regulated intestinal iron absorption which leads to excessive iron storage in various organs and manifests with a wide range of signs and symptoms, including abdominal pain, weakness, lethargy, weight loss, elevated serum aminotransferase levels, increase in skin pigmentation, and/or arthropathy in the metacarpophalangeal joints. Other commonly associated manifestations include hepatomegaly, cirrhosis, liver fibrosis, hepatocellular carcinoma, restrictive cardiomyopathy and/or diabetes mellitus.","definition_xrefs":["Orphanet:465508"],"gene_count":0,"genotype_count":0,"name":"obsolete symptomatic form of hemochromatosis type 1 (obsolete MONDO:0034028)","termid":"MONDO:0034028","xrefs":{"Monarch":{"xref_id":"0034028"}}}


id: PBO:0056710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 2","termid":"PBO:0056710"}


id: MONDO:0019731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial visceral amyloidosis","termid":"MONDO:0007099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"AApoAI amyloidosis","secondary_identifiers":["NANDO:1201062","Orphanet:93560","GARD:19224","UMLS:C5680269","MEDGEN:1842920"],"synonyms":[{"name":"apolipoprotein A-I amyloidosis","type":"exact"},{"name":"familial amyloid nephropathy due to apolipoprotein A-I variant","type":"exact"},{"name":"familial renal amyloidosis due to apolipoprotein A-I variant","type":"exact"},{"name":"hereditary amyloid nephropathy due to apolipoprotein A-I variant","type":"exact"},{"name":"hereditary renal amyloidosis due to apolipoprotein A-I variant","type":"exact"}],"termid":"MONDO:0019731","xrefs":{"Monarch":{"xref_id":"0019731"}}}


id: GO:0007247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAP kinase activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK (mating sensu Saccharomyces) (obsolete GO:0007247)","synonyms":[{"name":"activation of MAPK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007247"}


id: PBO:0091574
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human HUS1","termid":"PBO:0091574"}


id: MONDO:0970945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 116","secondary_identifiers":["UMLS:C5935615","DOID:0070545","MEDGEN:1857742","OMIM:620806"],"termid":"MONDO:0970945","xrefs":{"Monarch":{"xref_id":"0970945"}}}


id: PBO:0055516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2950","termid":"PBO:0055516"}


id: GO:0060713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the labyrinthine layer of the placenta is generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic placenta morphogenesis","termid":"GO:0060669"},{"relation_name":"part_of","term_name":"labyrinthine layer development","termid":"GO:0060711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labyrinthine layer morphogenesis","termid":"GO:0060713"}


id: GO:0045709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of salivary gland determination in an adult organism.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of salivary gland boundary specification","termid":"GO:0045705"},{"relation_name":"is_a","term_name":"regulation of adult salivary gland boundary specification","termid":"GO:0045707"},{"relation_name":"negatively_regulates","term_name":"adult salivary gland boundary specification","termid":"GO:0007434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adult salivary gland boundary specification","synonyms":[{"name":"down regulation of adult salivary gland determination","type":"exact"},{"name":"down-regulation of adult salivary gland determination","type":"exact"},{"name":"downregulation of adult salivary gland determination","type":"exact"},{"name":"inhibition of adult salivary gland determination","type":"narrow"},{"name":"negative regulation of adult salivary gland determination","type":"exact"}],"termid":"GO:0045709"}


id: MONDO:0006708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the family Desulfovibrionaceae.","definition_xrefs":["MESH:D045824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Desulfovibrionaceae infectious disease","synonyms":[{"name":"Bilophila infection","type":"related"},{"name":"Bilophila infections","type":"related"},{"name":"Desulfovibrio infection","type":"related"},{"name":"Desulfovibrio infections","type":"related"},{"name":"Desulfovibrionaceae caused disease or disorder","type":"exact"},{"name":"Desulfovibrionaceae disease or disorder","type":"exact"},{"name":"Desulfovibrionaceae infection","type":"related"},{"name":"Lawsonia infection","type":"related"},{"name":"Lawsonia infections","type":"related"},{"name":"commensal Bilophila infection","type":"related"},{"name":"infection, Bilophila","type":"related"},{"name":"infection, Desulfovibrio","type":"related"},{"name":"infection, Desulfovibrionaceae","type":"related"},{"name":"infection, Lawsonia","type":"related"},{"name":"infections, Bilophila","type":"related"},{"name":"infections, Desulfovibrio","type":"related"},{"name":"infections, Desulfovibrionaceae","type":"related"},{"name":"infections, Lawsonia","type":"related"}],"termid":"MONDO:0006708","xrefs":{"Monarch":{"xref_id":"0006708"}}}


id: MONDO:0009855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder that affects the ability of the body to effectively break down fat from our diet. It is typically characterized by hypotonia (low muscle tone) and seizures in the newborn period. Other symptoms include unusual facial features and an enlarged liver (hepatomegaly). Most babies with this condition nevergain anydevelopmental skills and do not survive past the age of 2. DBP deficiency is caused by mutations in the HSD17B4 gene and is inherited in an autosomal recessive manner. Some researchers have suggested classifying DBP deficiency into three subtypes, depending on how severely the mutation in the HSD17B4 gene affects the function of the gene and the protein that it codes for. Almost all individuals with types I, II, and III have similar signs and symptoms. A fourth subtype has additionally been proposed for individuals that have less severe symptoms. While there is no cure for DBP deficiency, treatment is focused on improving nutrition and growth, controlling symptoms, and limiting the progression of liver disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"d-bifunctional protein deficiency","secondary_identifiers":["MEDGEN:137982","Orphanet:300","NCIT:C119676","UMLS:C0342870","GARD:4539","OMIM:261515","ICD9:277.6","NANDO:1200766","SCTID:238068007","DOID:0090031"],"synonyms":[{"name":"17-beta-hydroxysteroid dehydrogenase 4 deficiency","type":"related"},{"name":"17-beta-hydroxysteroid dehydrogenase IV deficiency","type":"related"},{"name":"D-bifunctional enzyme deficiency","type":"exact"},{"name":"DBP deficiency","type":"related"},{"name":"HSD17B4 deficiency","type":"exact"},{"name":"Pbfe deficiency","type":"related"},{"name":"bifunctional enzyme deficiency","type":"related"},{"name":"d-bifunctional protein deficiency","type":"exact"},{"name":"multifunctional enzyme deficiency","type":"exact"},{"name":"peroxisomal bifunctional enzyme deficiency","type":"related"},{"name":"peroxisomal multifunctional enzyme (MFE2) deficiency","type":"exact"},{"name":"peroxisomal multifunctional enzyme deficiency","type":"exact"},{"name":"pseudo-Zellweger syndrome","type":"exact"}],"termid":"MONDO:0009855","xrefs":{"Monarch":{"xref_id":"0009855"}}}


id: PBO:0117396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC67A1 antisense RNA","termid":"PBO:0117396"}


id: FYPO:0007531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 is decreased at heterochromatin islands near genes that are normally expressed during the meiotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:22144463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","termid":"FYPO:0007213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007531"}


id: PATO:0000558
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000558 size value (obsolete PATO:0000558)","termid":"PATO:0000558"}


id: PBO:0068260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal N2","termid":"PBO:0068260"}


id: SO:0001399
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified serine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_serine","secondary_identifiers":["MOD:00916"],"synonyms":[{"name":"MosSer","type":"exact"},{"name":"modified L serine","type":"exact"},{"name":"modified L-serine","type":"exact"}],"termid":"SO:0001399"}


id: MONDO:0009236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kandori fleck retina is a rare, genetic retinal dystrophy characterized by irregular, sharply defined, yellowish-white lesions of variable size that are distributed mainly in the nasal equatorial region of the retina, with a tendency to confluence, that are not associated with any vascular or optic nerve abnormalities. They frequently manifest as mild and stationary night blindness.","definition_xrefs":["Orphanet:99179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial flecked retinopathy","termid":"MONDO:0016420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Kandori fleck retina","secondary_identifiers":["icd11.foundation:697904956","SCTID:765191009","GARD:16900","MEDGEN:78764","OMIM:228990","MESH:C562701","UMLS:C0271257","ICD10CM:H35.5"],"synonyms":[{"name":"FLECK retina of KANDORI","type":"related"}],"termid":"MONDO:0009236","xrefs":{"Monarch":{"xref_id":"0009236"}}}


id: GO:0140883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal execution of host reticulophagy, leading to an increase in the frequency, rate or extent of reticulophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:35239449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host autophagy","termid":"GO:0039520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host reticulophagy","synonyms":[{"name":"activation of host reticulophagy by virus","type":"exact"},{"name":"induction by virus of host reticulophagy","type":"narrow"},{"name":"positive regulation by virus of host reticulophagy","type":"broad"}],"termid":"GO:0140883"}


id: PBO:0039840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 10","termid":"PBO:0039840"}


id: PBO:0109614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitic acid regulated anti-inflammatory lncRNA","termid":"PBO:0109614"}


id: GO:0140566
data:
  {"annotated_genes":["SJAG_00184","SJAG_01579","SJAG_00545","SJAG_03230","SJAG_01009","SJAG_01601","SJAG_03628","SJAG_03916","SJAG_01205","SJAG_04574","SJAG_02701"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95818,99114,106656],"is_not":false,"summary":null,"term":"GO:0140566"},{"annotations":[111289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140172"},{"annotations":[111290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140173"},{"annotations":[107713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140002"},{"annotations":[101030,106021,112471,93130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062072"},{"annotations":[100801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140008"},{"annotations":[109881,111291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140005"},{"annotations":[109882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990889"},{"annotations":[112476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061649"}]},"cv_name":"molecular_function","definition":"A chromatin adaptor activity that brings together a protein and a specific form of histone, either modified by a post-translational modification, or the unmodified form. Histone readers have roles in many processes, including in centromere function or in modulating the accessibility of cis-regulatory regions to the transcription machinery.","definition_xrefs":["PMID:31082667","PMID:11498575","PMID:25688442","PMID:34726351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-protein adaptor activity","termid":"GO:0140463"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00184":null,"SJAG_00545":null,"SJAG_01009":null,"SJAG_01205":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_02701":null,"SJAG_03230":null,"SJAG_03628":null,"SJAG_03916":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"histone reader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"epigenetic reader","type":"broad"},{"name":"histone reader","type":"exact"}],"termid":"GO:0140566","terms_by_termid":{"GO:0061649":null,"GO:0062072":null,"GO:0140002":null,"GO:0140005":null,"GO:0140008":null,"GO:0140172":null,"GO:0140173":null,"GO:0140566":null,"GO:1990889":null}}


id: PBO:0034713
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens RAB6A","termid":"PBO:0034713"}


id: PBO:0005262
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Checking DNA Synthesis","termid":"PBO:0005262"}


id: PBO:0078115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 4","termid":"PBO:0078115"}


id: PBO:0085901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in positive regulation of 1,3-beta-glucan synthesis and the Pkc1p-MAPK pathway; multicopy suppressor of temperature-sensitive mutations in CDC24 and CDC42, and of mutations in BEM4; potential Cdc28p substrate; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0085901"}


id: PBO:0070618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 2","termid":"PBO:0070618"}


id: PBO:0004799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki1","termid":"PBO:0004799"}


id: GO:0018990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shedding of the old chitin-based cuticlar fragments during the molting cycle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecdysis, chitin-based cuticle","termid":"GO:0018990"}


id: PBO:0080603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 37","termid":"PBO:0080603"}


id: _global:results_in_determination_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p 'results in determination of' c if and only if p is a developmental process and c is a cell and p results in the state of c changing to be determined. Once a cell becomes determined, it becomes committed to differentiate down a particular pathway regardless of its environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_determination_of","secondary_identifiers":["GOREL:0001018","RO:0002349"],"termid":"_global:results_in_determination_of"}


id: GO:0016990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H2O = L-citrulline + NH3.","definition_xrefs":["EC:3.5.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"arginine deiminase activity","secondary_identifiers":["MetaCyc:ARGININE-DEIMINASE-RXN","RHEA:19597"],"synonyms":[{"name":"L-arginine deiminase activity","type":"related"},{"name":"L-arginine iminohydrolase activity","type":"related"},{"name":"arginine dihydrolase activity","type":"related"},{"name":"citrulline iminase activity","type":"related"}],"termid":"GO:0016990"}


id: PBO:0005529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ATXN10 ortholog, implicated in amino acid biosynthesis","termid":"PBO:0005529"}


id: MONDO:0012907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome associates progressive visual loss with scoliosis or kyphoscoliosis and arachnodactyly of the fingers and toes.","definition_xrefs":["Orphanet:171844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blindness - scoliosis - arachnodactyly syndrome","secondary_identifiers":["MESH:C567309","OMIM:612445","SCTID:717920004","GARD:17070","MEDGEN:436640","UMLS:C2676234"],"synonyms":[{"name":"scoliosis, arachnodactyly, and blindness","type":"related"}],"termid":"MONDO:0012907","xrefs":{"Monarch":{"xref_id":"0012907"}}}


id: MONDO:0014449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital analbuminemia (CAA) is characterized by the absence or dramatic reduction of circulating human serum albumin (HSA).","definition_xrefs":["Orphanet:86816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital analbuminemia","secondary_identifiers":["GARD:13056","MEDGEN:930922","OMIM:616000","NCIT:C124851","SCTID:718721006","UMLS:C4305253"],"synonyms":[{"name":"ANALBA","type":"related"},{"name":"analbuminemia","type":"related"}],"termid":"MONDO:0014449","xrefs":{"Monarch":{"xref_id":"0014449"}}}


id: PBO:0053828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1093","termid":"PBO:0053828"}


id: GO:0060517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication of epithelial cells, contributing to the expansion of the primary prostatic bud.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"},{"relation_name":"part_of","term_name":"primary prostatic bud elongation","termid":"GO:0060516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in prostatic bud elongation","termid":"GO:0060517"}


id: PBO:0035795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_secretion_during_vegetative_growth","termid":"PBO:0035795"}


id: PBO:0050743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 5","termid":"PBO:0050743"}


id: PBO:0113048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome linkage inner nuclear membrane protein; CLIP, involved in perinuclear chromosome tethering and rDNA repeat stability; involved in regulating mitotic exit; dephosphorylated by Cdc14p in anaphase, which promotes timely rDNA segregation and allows mitotic progression; interacts with Csm1p and Lrs4p; null mutant has elevated levels of unequal sister-chromatid exchange; GFP-fusion protein localizes to the nuclear periphery; Cdc28p substrate","termid":"PBO:0113048"}


id: GO:0021742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the abducens nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nucleus development","termid":"GO:0021742"}


id: MONDO:0004491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant tumor arising from trophoblastic cells in the uterus during pregnancy. Approximately half of the cases develop from a complete hydatidiform mole. There is often marked elevation of human chorionic gonadotropin (hCG) in the blood. Choriocarcinomas disseminate rapidly through the hematogenous route; the lungs are most frequently affected.","definition_xrefs":["NCIT:C27246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of corpus uteri","termid":"MONDO:0016273"},{"relation_name":"is_a","term_name":"gestational choriocarcinoma","termid":"MONDO:0020550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus choriocarcinoma","secondary_identifiers":["MEDGEN:234466","ONCOTREE:UCCA","DOID:8187","UMLS:C1336904","DOID:8188"],"synonyms":[{"name":"body of uterus choriocarcinoma (disease)","type":"exact"},{"name":"body of uterus gestational choriocarcinoma","type":"exact"},{"name":"choriocarcinoma","type":"related"},{"name":"gestational choriocarcinoma of body of uterus","type":"exact"},{"name":"gestational uterine corpus choriocarcinoma","type":"exact"},{"name":"uterine corpus gestational choriocarcinoma","type":"exact"}],"termid":"MONDO:0004491","xrefs":{"Monarch":{"xref_id":"0004491"}}}


id: PBO:0034536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_subtelomere-derived_RNA_level","termid":"PBO:0034536"}


id: GO:1900676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of F-9775B biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of F-9775B biosynthetic process","termid":"GO:1900675"},{"relation_name":"is_a","term_name":"negative regulation of polyketide biosynthetic process","termid":"GO:1900733"},{"relation_name":"negatively_regulates","term_name":"F-9775B biosynthetic process","termid":"GO:1900614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of F-9775B biosynthetic process","synonyms":[{"name":"down regulation of F-9775B anabolism","type":"exact"},{"name":"down regulation of F-9775B biosynthesis","type":"exact"},{"name":"down regulation of F-9775B biosynthetic process","type":"exact"},{"name":"down regulation of F-9775B formation","type":"exact"},{"name":"down regulation of F-9775B synthesis","type":"exact"},{"name":"down-regulation of F-9775B anabolism","type":"exact"},{"name":"down-regulation of F-9775B biosynthesis","type":"exact"},{"name":"down-regulation of F-9775B biosynthetic process","type":"exact"},{"name":"down-regulation of F-9775B formation","type":"exact"},{"name":"down-regulation of F-9775B synthesis","type":"exact"},{"name":"downregulation of F-9775B anabolism","type":"exact"},{"name":"downregulation of F-9775B biosynthesis","type":"exact"},{"name":"downregulation of F-9775B biosynthetic process","type":"exact"},{"name":"downregulation of F-9775B formation","type":"exact"},{"name":"downregulation of F-9775B synthesis","type":"exact"},{"name":"inhibition of F-9775B anabolism","type":"exact"},{"name":"inhibition of F-9775B biosynthesis","type":"exact"},{"name":"inhibition of F-9775B biosynthetic process","type":"narrow"},{"name":"inhibition of F-9775B formation","type":"exact"},{"name":"inhibition of F-9775B synthesis","type":"exact"},{"name":"negative regulation of F-9775B anabolism","type":"exact"},{"name":"negative regulation of F-9775B biosynthesis","type":"exact"},{"name":"negative regulation of F-9775B formation","type":"exact"},{"name":"negative regulation of F-9775B synthesis","type":"exact"}],"termid":"GO:1900676"}


id: _global:has_output_o_product_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the has_output relation with the gene_product_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output_o_product_of","secondary_identifiers":["GOREL:0001029"],"termid":"_global:has_output_o_product_of"}


id: MONDO:1011332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mitochondrial disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial disease, non-human animal","termid":"MONDO:1011332","xrefs":{"Monarch":{"xref_id":"1011332"}}}


id: PBO:0057136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 218-1","termid":"PBO:0057136"}


id: MONDO:0001924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dystrophies primarily involving the retinal pigment epithelium","secondary_identifiers":["MEDGEN:1843460","icd11.foundation:1387676300","ICD10CM:H35.54","DOID:14252","ICD9:362.76","UMLS:C0154865"],"termid":"MONDO:0001924","xrefs":{"Monarch":{"xref_id":"0001924"}}}


id: GO:0140080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of an AP site 3' and 5' of the baseless site, generating a 3'-phosphate and a 5'-OH.","definition_xrefs":["PMID:2519777"],"gene_count":0,"genotype_count":0,"name":"obsolete class III/IV DNA-(apurinic or apyrimidinic site) endonuclease activity (obsolete GO:0140080)","secondary_identifiers":["Wikipedia:AP_endonuclease"],"synonyms":[{"name":"endonuclease III","type":"related"},{"name":"endonuclease IV","type":"related"}],"termid":"GO:0140080"}


id: GO:0071198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP6 associated with the channel via interaction with the Kv alpha subunit 4.1.","definition_xrefs":["PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Kv4.1-DPP6 channel complex","secondary_identifiers":["CORUM:600"],"synonyms":[{"name":"Kv4.1-DPPX channel complex","type":"exact"}],"termid":"GO:0071198"}


id: GO:0052198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of peptidase activity in other organism involved in symbiotic interaction (obsolete GO:0052198)","synonyms":[{"name":"modulation of protease activity in other organism during symbiotic interaction","type":"related"},{"name":"modulation of protease activity in other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0052198"}


id: PBO:0082207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-specific exomannosidase of the endoplasmic reticulum; involved in glycan trimming of both folded and misfolded glycoproteins; complexes with Pdi1p, and trims a mannose from Man8GlcNac2 glycans to generate Man7GlcNac2, an oligosaccharide signal on glycoproteins destined for ER-associated protein degradation; requires Pdi1p for stability and substrate recognition; human homolog EDEM1 can complement yeast null mutant","termid":"PBO:0082207"}


id: PBO:0113403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ubiquitin-specific protease that cleaves ubiquitin-protein fusions; UBP9 has a paralog, UBP13, that arose from the whole genome duplication","termid":"PBO:0113403"}


id: PR:O94711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.11c","synonyms":[{"name":"Spom972h-gyp2","type":"exact"}],"termid":"PR:O94711"}


id: MONDO:0011141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megaloblastic anemia-immunodeficiency due to folate transporter 1 deficiency","termid":"MONDO:0971066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"megaloblastic anemia, folate-responsive","secondary_identifiers":["UMLS:C2749656","MEDGEN:440842","OMIM:601775"],"synonyms":[{"name":"MEGAF","type":"exact"},{"name":"folate level in erythrocytes","type":"exact"}],"termid":"MONDO:0011141","xrefs":{"Monarch":{"xref_id":"0011141"}}}


id: PBO:0016066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit Pcc1 (predicted)","termid":"PBO:0016066"}


id: FYPO:0002897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"decreased protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0002897"}


id: GO:0061132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of two or more cells or tissues that causes the cells of the gut to change their fates and specify the development of the pancreas.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ induction","termid":"GO:0001759"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"positive regulation of epithelial tube formation","termid":"GO:1905278"},{"relation_name":"positively_regulates","term_name":"pancreas field specification","termid":"GO:0061131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas induction","termid":"GO:0061132"}


id: FYPO:0004948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger portion of the centromeric region of the chromosome than normal.","definition_xrefs":["PomBase:mah","PMID:17948055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased spatial extent of centromeric heterochromatin assembly","synonyms":[{"name":"increased spatial extent of centromeric heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of centromeric heterochromatin assembly during vegetative growth","type":"exact"},{"name":"increased spatial extent of centromeric heterochromatin formation","type":"exact"}],"termid":"FYPO:0004948"}


id: GO:0009900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The opening of an anther, fruit or other structure, which permits the escape of reproductive bodies contained within it.","definition_xrefs":["ISBN:0879015322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dehiscence","secondary_identifiers":["Wikipedia:Dehiscence_(botany)"],"termid":"GO:0009900"}


id: GO:0050283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine O-sulfate + H2O = pyruvate + NH3 + sulfate.","definition_xrefs":["MetaCyc:SERINE-SULFATE-AMMONIA-LYASE-RXN","EC:4.3.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"serine-sulfate ammonia-lyase activity","secondary_identifiers":["RHEA:15605"],"synonyms":[{"name":"(L-SOS)lyase activity","type":"related"},{"name":"L-serine-O-sulfate ammonia-lyase (pyruvate-forming)","type":"related"},{"name":"serine-sulphate ammonia-lyase activity","type":"exact"}],"termid":"GO:0050283"}


id: GO:0045466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of the R7 photoreceptor.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R7 cell differentiation","termid":"GO:0045466"}


id: MONDO:0013845
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88138],"is_not":false,"summary":null,"term":"MONDO:0013845"}]},"cv_name":"mondo","definition":"Any auriculocondylar syndrome in which the cause of the disease is a mutation in the PLCB4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auriculocondylar syndrome","termid":"MONDO:0000107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"auriculocondylar syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614669","GARD:15831","MEDGEN:766318","UMLS:C3553404"],"synonyms":[{"name":"ARCND2","type":"related"},{"name":"AURICULOCONDYLAR syndrome 2","type":"related"},{"name":"Auriculocondylar syndrome 2","type":"exact"},{"name":"Auriculocondylar syndrome type 2","type":"exact"},{"name":"PLCB4 auriculocondylar syndrome","type":"exact"},{"name":"auriculocondylar syndrome caused by mutation in PLCB4","type":"exact"}],"termid":"MONDO:0013845","terms_by_termid":{"MONDO:0013845":null},"xrefs":{"Monarch":{"xref_id":"0013845"}}}


id: GO:0047352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'-adenylyl sulfate + NH4 = adenosine 5'-phosphoramidate + 2 H+ + sulfate.","definition_xrefs":["EC:2.7.7.51","RHEA:19197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"adenylylsulfate-ammonia adenylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01619","MetaCyc:2.7.7.51-RXN"],"synonyms":[{"name":"APSAT","type":"related"},{"name":"adenylylsulfate:ammonia adenylyltransferase activity","type":"related"},{"name":"adenylylsulphate-ammonia adenylyltransferase activity","type":"exact"}],"termid":"GO:0047352"}


id: MONDO:1010011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilated cardiomyopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilated cardiomyopathy, non-human animal","secondary_identifiers":["OMIA:000162"],"termid":"MONDO:1010011","xrefs":{"Monarch":{"xref_id":"1010011"}}}


id: GO:0070757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-35 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:add","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-35-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-8984722"],"synonyms":[{"name":"IL-35-mediated signaling pathway","type":"exact"},{"name":"interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070757"}


id: PBO:0047003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A6, pseudogene","termid":"PBO:0047003"}


id: GO:0110135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of the cysteine knot protein Norrin to a Frizzled 4 (Fzd4) family receptor on the surface of the target cell and ending with a change in cell state.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:17955262","PMID:15035989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Norrin signaling pathway","termid":"GO:0110135"}


id: GO:1903062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reverse cholesterol transport.","definition_xrefs":["PMID:23931754","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"regulates","term_name":"reverse cholesterol transport","termid":"GO:0043691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of reverse cholesterol transport","termid":"GO:1903062"}


id: MONDO:0013532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein Z deficiency","secondary_identifiers":["MEDGEN:462815","UMLS:C3151465","OMIM:614024"],"synonyms":[{"name":"protein Z deficiency","type":"exact"},{"name":"protein z deficiency","type":"exact"}],"termid":"MONDO:0013532","xrefs":{"Monarch":{"xref_id":"0013532"}}}


id: PBO:0039790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAF pseudogene 1","termid":"PBO:0039790"}


id: FYPO:0005849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a smaller portion of the chromosome than normal.","definition_xrefs":["GO:0031507","PMID:27648579","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly","termid":"FYPO:0003044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased spatial extent of heterochromatin assembly","synonyms":[{"name":"decreased heterochromatin spreading","type":"related"},{"name":"decreased spatial extent of heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of heterochromatin assembly during vegetative growth","type":"exact"},{"name":"decreased spatial extent of heterochromatin formation","type":"exact"},{"name":"reduced spatial extent of heterochromatin assembly","type":"exact"}],"termid":"FYPO:0005849"}


id: PBO:0047911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(9)(p21)","termid":"PBO:0047911"}


id: PBO:0083657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceIV; involved in intron mobility; encoded by a mobile group I intron within the mitochondrial COX1 gene","termid":"PBO:0083657"}


id: PBO:0091601
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was originally annotated as SPNCRNA.263 on the forward strand, from non-strand specific data","termid":"PBO:0091601"}


id: GO:0044154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 14 of the histone.","definition_xrefs":["GOC:jl","GOC:lb","PMID:17194708"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K14 acetylation (obsolete GO:0044154)","synonyms":[{"name":"histone H3 acetylation at K14","type":"exact"},{"name":"histone H3K14 acetylation","type":"exact"}],"termid":"GO:0044154"}


id: PBO:0087743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; interacts with a highly conserved 40-residue sequence of Snf2p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087743"}


id: GO:0007120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of defining the next site of bud emergence adjacent to the last site of bud emergence on a budding cell.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud site selection","termid":"GO:0000282"},{"relation_name":"is_a","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0007163","GO:0000281"],"is_obsolete":false,"name":"axial cellular bud site selection","synonyms":[{"name":"axial bud site selection","type":"exact"},{"name":"axial budding","type":"broad"}],"termid":"GO:0007120"}


id: GO:0090674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of an endothelial cell to the extracellular matrix via fibronectin.","definition_xrefs":["GOC:BHF","GOC:bc","PMID:19460962","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell-matrix adhesion","termid":"GO:0090673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}


id: PBO:0082991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic copper metallochaperone; transports copper to the secretory vesicle copper transporter Ccc2p for eventual insertion into Fet3p, which is a multicopper oxidase required for high-affinity iron uptake; human homolog ATOX1 can complement yeast atx1 mutant; overexpression of human ATOX1 suppresses lysine auxotrophy of the yeast sod1 null mutant, as does overexpression of yeast ATX1","termid":"PBO:0082991"}


id: GO:0000922
data:
  {"annotated_genes":["SJAG_01464","SJAG_03915","SJAG_01805","SJAG_00918","SJAG_02624","SJAG_01613","SJAG_05196","SJAG_04745","SJAG_02241","SJAG_01546","SJAG_02320","SJAG_02368","SJAG_02761","SJAG_03073","SJAG_01224"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93139,101106,120864,95724,98654,95651,104730,101804,96642,109043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090619"},{"annotations":[120159,109454,100509,101113],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990537"},{"annotations":[120160,102279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097431"},{"annotations":[103346,96648],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005827"}]},"cv_name":"cellular_component","definition":"Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01224":null,"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03915":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030615"],"termid":"GO:0000922","terms_by_termid":{"GO:0005827":null,"GO:0090619":null,"GO:0097431":null,"GO:1990537":null}}


id: GO:0097605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the nuclear envelope.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nuclear envelope permeability (obsolete GO:0097605)","synonyms":[{"name":"regulation of nuclear membrane permeability","type":"related"}],"termid":"GO:0097605"}


id: PBO:0049251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-rich RNA sequence binding factor 1","termid":"PBO:0049251"}


id: PBO:0030537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_processing","termid":"PBO:0030537"}


id: GO:0015738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glucuronate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexuronate transmembrane transport","termid":"GO:0015736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glucuronate transmembrane transport","synonyms":[{"name":"glucuronate transport","type":"related"}],"termid":"GO:0015738"}


id: GO:0051665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which membrane rafts are transported to, or maintained in, a specific location. Membrane rafts are small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes.","definition_xrefs":["GOC:ai","PMID:16645198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"membrane raft localization","synonyms":[{"name":"establishment and maintenance of membrane raft localization","type":"exact"},{"name":"lipid raft localization","type":"exact"},{"name":"membrane raft localisation","type":"exact"}],"termid":"GO:0051665"}


id: PBO:0068444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 18, pseudogene","termid":"PBO:0068444"}


id: GO:0045588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell differentiation","termid":"GO:0045586"},{"relation_name":"is_a","term_name":"positive regulation of gamma-delta T cell activation","termid":"GO:0046645"},{"relation_name":"positively_regulates","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of gamma-delta T cell differentiation","synonyms":[{"name":"activation of gamma-delta T cell differentiation","type":"narrow"},{"name":"positive regulation of gamma-delta T cell development","type":"related"},{"name":"positive regulation of gamma-delta T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of gamma-delta T-cell differentiation","type":"exact"},{"name":"positive regulation of gamma-delta T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of gamma-delta T cell differentiation","type":"narrow"},{"name":"up regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"up-regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"upregulation of gamma-delta T cell differentiation","type":"exact"}],"termid":"GO:0045588"}


id: GO:0046315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphocreatine, a phosphagen of creatine which is synthesized and broken down by creatine phosphokinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphocreatine metabolic process","termid":"GO:0006603"},{"relation_name":"is_a","term_name":"phosphagen catabolic process","termid":"GO:0042397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphocreatine catabolic process","synonyms":[{"name":"phosphocreatine breakdown","type":"exact"},{"name":"phosphocreatine catabolism","type":"exact"},{"name":"phosphocreatine degradation","type":"exact"}],"termid":"GO:0046315"}


id: GO:0007147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the second meiotic division occurs in the female germline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis II","termid":"GO:0007135"},{"relation_name":"is_a","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"female meiosis II","synonyms":[{"name":"female meiosis II nuclear division","type":"exact"}],"termid":"GO:0007147"}


id: MONDO:0020820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Sheldon-hall syndrome","termid":"MONDO:0011128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"distal arthrogryposis type 2B1","secondary_identifiers":["OMIM:601680","UMLS:C5193014","GARD:9909","MEDGEN:1676961","DOID:0111600"],"synonyms":[{"name":"DA2B1","type":"exact"},{"name":"arthrogryposis, distal, type 2B1","type":"exact"}],"termid":"MONDO:0020820","xrefs":{"Monarch":{"xref_id":"0020820"}}}


id: GO:0102656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-trans-16:1-phosphatidylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-trans-16:1-phosphatidylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-trans-16:1-phosphatidylglycerol desaturase activity (obsolete GO:0102656)","termid":"GO:0102656"}


id: PBO:0052763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 55","termid":"PBO:0052763"}


id: PBO:0080004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 antisense RNA 1","termid":"PBO:0080004"}


id: GO:0031287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sorocarp stalk cell differentiation. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:kp","GOC:mtg_sensu","PMID:4338436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sorocarp stalk cell differentiation","termid":"GO:0031285"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"positively_regulates","term_name":"sorocarp stalk cell differentiation","termid":"GO:0031149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sorocarp stalk cell differentiation","synonyms":[{"name":"activation of stalk cell differentiation","type":"narrow"},{"name":"positive regulation of stalk cell differentiation","type":"exact"},{"name":"stimulation of stalk cell differentiation","type":"narrow"},{"name":"up regulation of stalk cell differentiation","type":"exact"},{"name":"up-regulation of stalk cell differentiation","type":"exact"},{"name":"upregulation of stalk cell differentiation","type":"exact"}],"termid":"GO:0031287"}


id: PR:Q9UTQ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arp9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTQ7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit arp9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.06","synonyms":[{"name":"Spom972h-arp9","type":"exact"},{"name":"actin-like protein arp9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"actin-related protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"chromatin structure-remodeling complex subunit arp9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTQ7"}


id: GO:0061353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to the directed movement of a Malpighian tubule cell toward a stimulus, thereby contributing to the shaping of the tubule.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:19783135","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in Malpighian tubule cell chemotaxis (obsolete GO:0061353)","synonyms":[{"name":"bone morphogenic protein receptor signalling pathway involved in Malpighian tubule cell chemotaxis","type":"exact"}],"termid":"GO:0061353"}


id: PBO:0074590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 5B","termid":"PBO:0074590"}


id: MONDO:0020088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial partial lipodystrophy (FPLD) is a group of rare genetic lipodystrophic syndromes characterized, in most cases, by fat loss from the limbs and buttocks, from childhood or early adulthood, and often associated with acanthosis nigricans, insulin resistance, diabetes, hypertriglyceridemia and liver steatosis.","definition_xrefs":["Orphanet:98306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"},{"relation_name":"is_a","term_name":"partial lipodystrophy","termid":"MONDO:0027767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"familial partial lipodystrophy","secondary_identifiers":["MESH:D052496","OMIMPS:151660","SCTID:49292002","icd11.foundation:1661968243","MEDGEN:124408","UMLS:C0271694","NORD:1131","NANDO:1200861","NCIT:C84708","GARD:11962","DOID:0050440"],"synonyms":[{"name":"FPLD","type":"exact"},{"name":"Koberling-Dunnigan syndrome","type":"exact"},{"name":"congenital partial lipodystrophy","type":"exact"},{"name":"genetic partial lipodystrophy","type":"exact"},{"name":"lipodystrophy, familial partial","type":"exact"}],"termid":"MONDO:0020088","xrefs":{"Monarch":{"xref_id":"0020088"}}}


id: PBO:0030732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_nitrogen_starvation","termid":"PBO:0030732"}


id: GO:0060355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell adhesion molecule production","termid":"GO:0060353"},{"relation_name":"positively_regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion molecule production","termid":"GO:0060355"}


id: GO:1990768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The flow of blood through the gastric mucosa of an animal, enabling the transport of nutrients and the removal of waste products.","definition_xrefs":["PMID:10807413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastric mucosal blood circulation","synonyms":[{"name":"stomach mucosal blood circulation","type":"exact"}],"termid":"GO:1990768"}


id: PBO:0070008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1305, pseudogene","termid":"PBO:0070008"}


id: PBO:0069535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 805, pseudogene","termid":"PBO:0069535"}


id: GO:0050647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid, a straight-chain fatty acid with twenty carbon atoms and four double bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"},{"relation_name":"is_a","term_name":"icosanoid binding","termid":"GO:0050542"},{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding","synonyms":[{"name":"5-hydroxy-6E,8Z,11Z,14Z-eicosatetraenoic acid binding","type":"exact"}],"termid":"GO:0050647"}


id: PBO:0012229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein (fungal and protozoan)","termid":"PBO:0012229"}


id: PBO:0063094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-3 family cell polarity regulator","termid":"PBO:0063094"}


id: MONDO:0971095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyvalvular heart disease syndrome","termid":"MONDO:0016460"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 6","termid":"MONDO:0016905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"6q25.1 microdeletion syndrome","secondary_identifiers":["MEDGEN:1864381","Orphanet:664404","UMLS:C5925074"],"termid":"MONDO:0971095","xrefs":{"Monarch":{"xref_id":"0971095"}}}


id: GO:1903037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte cell-cell adhesion.","definition_xrefs":["GO_REF:0000058","GOC:rl","PMID:21106532","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte cell-cell adhesion","synonyms":[{"name":"regulation of leukocyte adhesion","type":"exact"},{"name":"regulation of leukocyte cell adhesion","type":"exact"}],"termid":"GO:1903037"}


id: MONDO:0007506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsoleted echo virus 11 sensitivity (obsolete MONDO:0007506)","secondary_identifiers":["OMIM:129150","MESH:C565071"],"synonyms":[{"name":"E11S","type":"related"},{"name":"echo virus 11 sensitivity","type":"exact"}],"termid":"MONDO:0007506","xrefs":{"Monarch":{"xref_id":"0007506"}}}


id: GO:0071549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dexamethasone stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"},{"relation_name":"is_a","term_name":"response to dexamethasone","termid":"GO:0071548"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dexamethasone stimulus","termid":"GO:0071549"}


id: MONDO:0000494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A final common manifestation of a wide variety of chronic kidney diseases characterized by glomerulosclerosis and tubulointerstitial fibrosis.","definition_xrefs":["PMID:16408108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulosclerosis","termid":"MONDO:0000490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal fibrosis","secondary_identifiers":["MEDGEN:508798","DOID:0050855","EFO:1001517","UMLS:C0151650","SCTID:197660000"],"termid":"MONDO:0000494","xrefs":{"Monarch":{"xref_id":"0000494"}}}


id: FYPO:0005120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is greater than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during meiotic cell cycle","synonyms":[{"name":"increased RNA accumulation during meiotic cell cycle","type":"related"},{"name":"increased transcript level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005120"}


id: MONDO:0013156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type B","termid":"MONDO:0000172"},{"relation_name":"is_a","term_name":"myopathy caused by variation in FKTN","termid":"MONDO:0700067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0002320","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital without intellectual disability), type B4","secondary_identifiers":["DOID:0112379","MEDGEN:413465","OMIM:613152","GARD:18456","UMLS:C2751052"],"synonyms":[{"name":"MDDGB4","type":"related"},{"name":"congenital muscular dystrophy-FKTN related","type":"exact"},{"name":"muscular dystrophy, congenital, Fktn-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital without intellectual disability), type B, 4","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital without mental retardation), type B, 4","type":"related"}],"termid":"MONDO:0013156","xrefs":{"Monarch":{"xref_id":"0013156"}}}


id: GO:0141204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dipeptide from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["PMID:38507452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"},{"relation_name":"is_a","term_name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"dipeptide transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"dipeptide export from lysosomal lumen","type":"exact"},{"name":"dipeptide export from lysosome","type":"exact"},{"name":"transmembrane dipeptide transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:0141204"}


id: PBO:0053589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 615","termid":"PBO:0053589"}


id: PR:O13894
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug103 gene.","definition_xrefs":["UniProtKB:O13894","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 103 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.02c","synonyms":[{"name":"Spom972h-mug103","type":"exact"}],"termid":"PR:O13894"}


id: PBO:0068709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 90, pseudogene","termid":"PBO:0068709"}


id: PBO:0028837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_homologous_chromosome_pairing","termid":"PBO:0028837"}


id: PBO:0070643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 14","termid":"PBO:0070643"}


id: PR:P78860
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA methyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.15c","secondary_identifiers":["UniProtKB:P78860"],"synonyms":[{"name":"21S rRNA (uridine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ2","type":"exact"}],"termid":"PR:P78860"}


id: PBO:0070998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21","termid":"PBO:0070998"}


id: MONDO:0018628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"},{"relation_name":"is_a","term_name":"AIDS-related disorder","termid":"MONDO:0024571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"HIV-associated cancer","secondary_identifiers":["Orphanet:443291","UMLS:C5680059","NCIT:C4046","GARD:21857","MEDGEN:1843219"],"synonyms":[{"name":"HIV-related cancer","type":"exact"}],"termid":"MONDO:0018628","xrefs":{"Monarch":{"xref_id":"0018628"}}}


id: PBO:0004986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epimarase (predicted)","termid":"PBO:0004986"}


id: PBO:0039518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 33B","termid":"PBO:0039518"}


id: PBO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp15 (predicted)","termid":"PBO:0000407"}


id: GO:0038009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction by the movement of a signaling receptor from the plasma membrane to the inside of the cell. Receptor internalization can have a positive or negative effect on a signaling pathway.","definition_xrefs":["GOC:bf","PMID:17011816","GOC:signaling","PMID:19696798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"regulation of signal transduction by receptor internalization","synonyms":[{"name":"regulation of signaling pathway by receptor endocytosis","type":"exact"}],"termid":"GO:0038009"}


id: GO:0030116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A growth factor that binds selectively and non-covalently to glial cell-derived neurotrophic factor receptors.","definition_xrefs":["PMID:11476867","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor binding","synonyms":[{"name":"glial cell line-derived neurotrophic factor receptor binding","type":"related"},{"name":"glial cell line-derived neurotrophic factor receptor ligand","type":"narrow"}],"termid":"GO:0030116"}


id: PR:O13765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lariat debranching enzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12849:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lariat debranching enzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.02c","secondary_identifiers":["UniProtKB:O13765"],"synonyms":[{"name":"SPAC17A5.02c","type":"related"},{"name":"Spom972h-DBR1","type":"exact"}],"termid":"PR:O13765"}


id: PR:Q1MTR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cti6 gene.","definition_xrefs":["UniProtKB:Q1MTR4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit cti6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.08","synonyms":[{"name":"Spom972h-cti6","type":"exact"}],"termid":"PR:Q1MTR4"}


id: GO:1904143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of carotenoid biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25675505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of carotenoid biosynthetic process","synonyms":[{"name":"activation of carotenoid anabolism","type":"narrow"},{"name":"activation of carotenoid biosynthesis","type":"narrow"},{"name":"activation of carotenoid biosynthetic process","type":"narrow"},{"name":"activation of carotenoid formation","type":"narrow"},{"name":"activation of carotenoid synthesis","type":"narrow"},{"name":"positive regulation of carotenoid anabolism","type":"exact"},{"name":"positive regulation of carotenoid biosynthesis","type":"exact"},{"name":"positive regulation of carotenoid formation","type":"exact"},{"name":"positive regulation of carotenoid synthesis","type":"exact"},{"name":"up regulation of carotenoid anabolism","type":"exact"},{"name":"up regulation of carotenoid biosynthesis","type":"exact"},{"name":"up regulation of carotenoid biosynthetic process","type":"exact"},{"name":"up regulation of carotenoid formation","type":"exact"},{"name":"up regulation of carotenoid synthesis","type":"exact"},{"name":"up-regulation of carotenoid anabolism","type":"exact"},{"name":"up-regulation of carotenoid biosynthesis","type":"exact"},{"name":"up-regulation of carotenoid biosynthetic process","type":"exact"},{"name":"up-regulation of carotenoid formation","type":"exact"},{"name":"up-regulation of carotenoid synthesis","type":"exact"},{"name":"upregulation of carotenoid anabolism","type":"exact"},{"name":"upregulation of carotenoid biosynthesis","type":"exact"},{"name":"upregulation of carotenoid biosynthetic process","type":"exact"},{"name":"upregulation of carotenoid formation","type":"exact"},{"name":"upregulation of carotenoid synthesis","type":"exact"}],"termid":"GO:1904143"}


id: PBO:0042679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEBPA divergent transcript","termid":"PBO:0042679"}


id: PBO:0059569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1M","termid":"PBO:0059569"}


id: MONDO:0022545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Barnicoat Baraitser syndrome","synonyms":[{"name":"Barnicoat-Baraitser syndrome","type":"related"},{"name":"polysyndactyly overgrowth syndrome","type":"related"}],"termid":"MONDO:0022545","xrefs":{"Monarch":{"xref_id":"0022545"}}}


id: PBO:0070527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 26","termid":"PBO:0070527"}


id: FYPO:0002756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cysteine synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal cysteine synthase activity","termid":"FYPO:0002754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000654","FYPO:0000652","FYPO:0000002","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased cysteine synthase activity","termid":"FYPO:0002756"}


id: PBO:0016578
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-chromosome Associated Protein","termid":"PBO:0016578"}


id: GO:1900607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tensidol B.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"tensidol B metabolic process","termid":"GO:1900606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"tensidol B catabolic process","synonyms":[{"name":"tensidol B breakdown","type":"exact"},{"name":"tensidol B catabolism","type":"exact"},{"name":"tensidol B degradation","type":"exact"}],"termid":"GO:1900607"}


id: PBO:0072152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 29","termid":"PBO:0072152"}


id: PBO:0058695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6823","termid":"PBO:0058695"}


id: PBO:0074883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 62A","termid":"PBO:0074883"}


id: PR:Q9USV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USV0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD-associated E3 ubiquitin-protein ligase component (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.08c","synonyms":[{"name":"Spom972h-hrd3","type":"exact"}],"termid":"PR:Q9USV0"}


id: PBO:0052757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 49","termid":"PBO:0052757"}


id: MONDO:0030797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the CC2D2A gene.","definition_xrefs":["PMID:30267408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 93","secondary_identifiers":["MEDGEN:1810905","UMLS:C5676970","OMIM:619845"],"synonyms":[{"name":"CC2D2A retinitis pigmentosa 93","type":"exact"},{"name":"RP93","type":"exact"},{"name":"retinitis pigmentosa 93","type":"exact"}],"termid":"MONDO:0030797","xrefs":{"Monarch":{"xref_id":"0030797"}}}


id: PBO:0090865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amt2","termid":"PBO:0090865"}


id: PBO:0067916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 218","termid":"PBO:0067916"}


id: PBO:0018204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor-like ribosome biogenesis protein","termid":"PBO:0018204"}


id: PBO:0078199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-1","termid":"PBO:0078199"}


id: MONDO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granuloma located on the orbit of the eye.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic orbital inflammation","termid":"MONDO:0001849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orbital granuloma","secondary_identifiers":["SCTID:72776003","DOID:10499","UMLS:C0155262","ICD9:376.11","MEDGEN:102330"],"termid":"MONDO:0001048","xrefs":{"Monarch":{"xref_id":"0001048"}}}


id: GO:0031308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of nuclear outer membrane (obsolete GO:0031308)","synonyms":[{"name":"intrinsic to nuclear outer membrane","type":"narrow"}],"termid":"GO:0031308"}


id: PBO:0063738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 3","termid":"PBO:0063738"}


id: GO:0006191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates deoxyinosine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleoside salvage","termid":"GO:0043098"},{"relation_name":"is_a","term_name":"deoxyinosine biosynthetic process","termid":"GO:0046095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyinosine salvage","termid":"GO:0006191"}


id: PR:O59753
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein complementing XP-A cells that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02497","PANTHER:PTHR10142:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.03","secondary_identifiers":["UniProtKB:O59753"],"synonyms":[{"name":"Spom972h-XPA","type":"exact"},{"name":"XP-A family homolog rhp14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59753"}


id: GO:0046875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an ephrin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"ephrin receptor binding","synonyms":[{"name":"Eph receptor binding","type":"exact"},{"name":"GPI-linked ephrin","type":"narrow"},{"name":"ephrin","type":"narrow"},{"name":"transmembrane ephrin","type":"narrow"}],"termid":"GO:0046875"}


id: PBO:0048883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 2","termid":"PBO:0048883"}


id: MONDO:0012282
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86899],"is_not":false,"summary":null,"term":"MONDO:0012282"}]},"cv_name":"mondo","definition":"An autosomal recessive syndrome characterized by joint contractures, skeletal abnormalities, anterior segment anomalies of the eye and early lethality.","definition_xrefs":["PMID:10319196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"B3GALT6-congenital disorder of glycosylation","termid":"MONDO:0100586"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"Al-Gazali syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:2725","UMLS:C1836121","GARD:10054","OMIM:609465","MESH:C536817","MEDGEN:373020"],"synonyms":[{"name":"Al Gazali Al Talabani syndrome","type":"related"},{"name":"Al Gazali syndrome","type":"related"},{"name":"Al-Gazali syndrome","type":"exact"},{"name":"eye defects arachnodactyly cardiopathy","type":"related"}],"termid":"MONDO:0012282","terms_by_termid":{"MONDO:0012282":null},"xrefs":{"Monarch":{"xref_id":"0012282"}}}


id: PBO:0029447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutamate-ammonia_ligase_activity","termid":"PBO:0029447"}


id: PBO:0075398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP110 nuclear body protein","termid":"PBO:0075398"}


id: MONDO:0017928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"9p13 microdeletion syndrome is a rare chromosomal anomaly syndrome, resulting from a partial interstitial deletion of the short arm of chromosome 9, characterized by mild to moderate developmental delay, hand tremors, myoclonic jerks, attention deficit-hyperactivity disorder and a social personality. Patients also present bruxism, short stature and minor facial dysmorphic features (e.g., bilateral epicantic folds, broad, flat nasal bridge, anteverted nares, low-set ears micro/retro-gnathia).","definition_xrefs":["Orphanet:324313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"chromosome 9p deletion syndrome","termid":"MONDO:0008013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9p13 microdeletion syndrome","secondary_identifiers":["UMLS:C4707097","SCTID:764725008","GARD:21437","MEDGEN:1635922"],"synonyms":[{"name":"Del(9)(p13)","type":"exact"},{"name":"monosomy 9p13","type":"exact"}],"termid":"MONDO:0017928","xrefs":{"Monarch":{"xref_id":"0017928"}}}


id: PBO:0000376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box","termid":"PBO:0000376"}


id: PBO:0089076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rcl1","termid":"PBO:0089076"}


id: GO:0090257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a muscle system process, a multicellular organismal process carried out by any of the organs or tissues in a muscle system.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"muscle system process","termid":"GO:0003012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle system process","termid":"GO:0090257"}


id: GO:0014883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of fast-contracting muscle fibers to a slower character. This may involve slowing of contractile rate, slow myosin gene induction, increase in oxidative metabolic properties, altered electrophysiology and altered innervation. This process also regulates skeletal muscle adapatation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle adaptation","termid":"GO:0014733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transition between fast and slow fiber","synonyms":[{"name":"transition between fast and slow fibre","type":"exact"},{"name":"transition fast-slow fiber","type":"exact"},{"name":"transition fast-slow fibre","type":"exact"}],"termid":"GO:0014883"}


id: PBO:0089554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12/MIND complex Mis13/Dsn1","termid":"PBO:0089554"}


id: GO:0120521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-(1,2 saturated acyl)-(4R)-hydroxysphinganine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an N-(2R-hydroxyacyl)-4R-hydroxysphinganine + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["RHEA:46520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid 2-hydroxylase activity","termid":"GO:0080132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN3O-4042"],"termid":"GO:0120521"}


id: PR:Q9P769
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1002 gene.","definition_xrefs":["UniProtKB:Q9P769","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L10-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP7G5.05","synonyms":[{"name":"Spom972h-rpl1002","type":"exact"}],"termid":"PR:Q9P769"}


id: MONDO:0800381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XX disorder of sex development","termid":"MONDO:0017576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XX true hermaphroditism, SRY-positive","termid":"MONDO:0800381","xrefs":{"Monarch":{"xref_id":"0800381"}}}


id: PBO:0060554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin","termid":"PBO:0060554"}


id: PBO:0035696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of,_positive_effect","termid":"PBO:0035696"}


id: PBO:0058685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6813","termid":"PBO:0058685"}


id: GO:0005219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables transmembrane transfer of calcium ions from an intracellular store to the cytosol on induction by increased calcium concentration and is sensitive to the plant alkaloid ryanodine.","definition_xrefs":["PMID:22822064","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-induced calcium release activity","termid":"GO:0048763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ryanodine-sensitive calcium-release channel activity","synonyms":[{"name":"caffeine-sensitive calcium-release channel","type":"related"},{"name":"ryanodine receptor","type":"narrow"}],"termid":"GO:0005219"}


id: PBO:0085214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform; shares redundant functions with Yck2p in morphogenesis, proper septin assembly, endocytic trafficking, and glucose sensing; stabilized by Sod1p binding in the presence of glucose and oxygen, causing glucose repression of respiratory metabolism; involved in the phosphorylation and regulation of glucose sensor Rgt2p; YCK1 has a paralog, YCK2, that arose from the whole genome duplication","termid":"PBO:0085214"}


id: MONDO:0008065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal groove, familial transverse","secondary_identifiers":["MEDGEN:322400","UMLS:C1834370","OMIM:161500"],"synonyms":[{"name":"nasal groove, familial transverse","type":"exact"}],"termid":"MONDO:0008065","xrefs":{"Monarch":{"xref_id":"0008065"}}}


id: GO:0044848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A distinct period or stage in a biological process or cycle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological phase","termid":"GO:0044848"}


id: MONDO:0017619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital sucrase-isomaltase deficiency","termid":"MONDO:0009114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"congenital sucrase-isomaltase deficiency with minimal starch tolerance","secondary_identifiers":["Orphanet:306446"],"synonyms":[{"name":"CSID with minimal starch tolerance","type":"exact"},{"name":"congenital sucrase-isomaltose malabsorption with minimal starch tolerance","type":"exact"},{"name":"congenital sucrose intolerance with minimal starch tolerance","type":"exact"},{"name":"disaccharide intolerance with minimal starch tolerance","type":"exact"}],"termid":"MONDO:0017619","xrefs":{"Monarch":{"xref_id":"0017619"}}}


id: PATO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001037 absolute life span (obsolete PATO:0001037)","termid":"PATO:0001037"}


id: GO:0050441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + glyoxylate + H2O = 3-ethylmalate + CoA + H+.","definition_xrefs":["RHEA:10500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"3-ethylmalate synthase activity","secondary_identifiers":["MetaCyc:3-ETHYLMALATE-SYNTHASE-RXN","KEGG_REACTION:R01180","EC:2.3.3.7"],"synonyms":[{"name":"2-ethyl-3-hydroxybutanedioate synthase activity","type":"related"},{"name":"3-ethylmalate glyoxylate-lyase (CoA-butanoylating) activity","type":"related"},{"name":"butanoyl-CoA:glyoxylate C-butanoyltransferase (thioester-hydrolysing, 1-carboxypropyl-forming)","type":"related"}],"termid":"GO:0050441"}


id: MONDO:0005333
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007785"}]},"cv_name":"mondo","definition":"Abnormally elevated thyroxine level in the blood.","definition_xrefs":["EFO:0004127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"is_obsolete":false,"name":"hyperthyroxinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0020551","HGNC:399","MESH:D006981","MEDGEN:6973","DOID:2855"],"termid":"MONDO:0005333","terms_by_termid":{"MONDO:0007785":null},"xrefs":{"Monarch":{"xref_id":"0005333"}}}


id: PBO:0116474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg24b","termid":"PBO:0116474"}


id: GO:0010106
data:
  {"annotated_genes":["SJAG_04032","SJAG_04031","SJAG_04677","SJAG_02474","SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59554,79512,95975,102395,114784],"is_not":false,"summary":null,"term":"GO:0010106"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of iron ions.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"part_of","term_name":"intracellular iron ion homeostasis","termid":"GO:0006879"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02474":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04677":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"cellular response to iron ion starvation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0010106","terms_by_termid":{"GO:0010106":null}}


id: GO:0045487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin metabolic process","termid":"GO:0009685"},{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"gibberellin catabolic process","synonyms":[{"name":"gibberellic acid breakdown","type":"narrow"},{"name":"gibberellic acid catabolic process","type":"narrow"},{"name":"gibberellic acid catabolism","type":"narrow"},{"name":"gibberellic acid degradation","type":"narrow"},{"name":"gibberellin catabolism","type":"exact"}],"termid":"GO:0045487"}


id: GO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by glucose","termid":"GO:0000430"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"},{"relation_name":"is_a","term_name":"positive regulation of transcription by glucose","termid":"GO:0046016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by glucose","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter by glucose","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by glucose","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter by glucose","type":"exact"}],"termid":"GO:0000432"}


id: GO:0160215
data:
  {"annotated_genes":["SJAG_02985","SJAG_02769","SJAG_01248","SJAG_01075","SJAG_00902","SJAG_01416","SJAG_03627","SJAG_04007","SJAG_03844","SJAG_00944","SJAG_04895","SJAG_00581","SJAG_01396","SJAG_04186","SJAG_04039","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003860"},{"annotations":[77230,78577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003986"},{"annotations":[93631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004099"},{"annotations":[75359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051500"},{"annotations":[109429,98710,82199,103559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047617"},{"annotations":[111442,64758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[79138,91898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[106121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[91899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[111443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[116423,79139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[111444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[99108,111445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[79140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[111446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[111447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[72409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000225"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CO-X + H2O = R-COOH + HX, hydrolysis of an acyl group or groups from a substrate molecule.","definition_xrefs":["PMID:38355760","PMID:2760018","PMID:29637793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_00902":null,"SJAG_00944":null,"SJAG_01075":null,"SJAG_01248":null,"SJAG_01396":null,"SJAG_01416":null,"SJAG_02769":null,"SJAG_02985":null,"SJAG_03013":null,"SJAG_03627":null,"SJAG_03844":null,"SJAG_04007":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674"],"is_obsolete":false,"name":"deacylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0160215","terms_by_termid":{"GO:0000225":null,"GO:0003860":null,"GO:0003986":null,"GO:0004099":null,"GO:0031078":null,"GO:0032041":null,"GO:0032129":null,"GO:0034739":null,"GO:0046969":null,"GO:0046970":null,"GO:0047617":null,"GO:0051500":null,"GO:0140765":null,"GO:0140937":null,"GO:0141222":null,"GO:0180032":null,"GO:0180033":null}}


id: PBO:0084533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); this complex contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs","termid":"PBO:0084533"}


id: MONDO:0018768
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"}]},"cv_name":"mondo","definition":"Familial cold urticaria (FCAS) is the mildest form of cryopyrin-associated periodic syndrome (CAPS) and is characterized by recurrent episodes of urticaria-like skin rash triggered by exposure to cold associated with low-grade fever, general malaise, eye redness and arthralgia/myalgia.","definition_xrefs":["Orphanet:47045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryopyrin-associated periodic syndrome","termid":"MONDO:0016168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial cold autoinflammatory syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C119053","MedDRA:10064570","NANDO:2201068","DOID:0090061","icd11.foundation:1932140025","OMIMPS:120100","NANDO:2200449","MEDGEN:137986","NANDO:2200454","GARD:9535","NANDO:1200466","UMLS:C0343068","NORD:1122"],"synonyms":[{"name":"FCAS","type":"exact"},{"name":"FCU","type":"exact"},{"name":"familial cold autoinflammatory syndrome","type":"exact"},{"name":"familial cold urticaria","type":"related"},{"name":"familial polymorphous cold eruption","type":"related"}],"termid":"MONDO:0018768","terms_by_termid":{"MONDO:0013766":null},"xrefs":{"Monarch":{"xref_id":"0018768"}}}


id: PBO:0059869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 7","termid":"PBO:0059869"}


id: MONDO:0000163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete breast-ovarian cancer, familial, susceptibility to (obsolete MONDO:0000163)","termid":"MONDO:0000163","xrefs":{"Monarch":{"xref_id":"0000163"}}}


id: PBO:0067073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 104, pseudogene","termid":"PBO:0067073"}


id: PBO:0076773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 15","termid":"PBO:0076773"}


id: GO:1905044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GOC:rph","GOC:TermGenie","GO_REF:0000058","PMID:22393241","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"}


id: FYPO:0006294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation. Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["GO:0016236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype","termid":"FYPO:0000140"},{"relation_name":"is_a","term_name":"normal macroautophagy","termid":"FYPO:0000385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal macroautophagy during nitrogen starvation","synonyms":[{"name":"normal macroautophagy during cellular response to nitrogen starvation","type":"exact"},{"name":"normal macroautophagy during nitrogen depletion","type":"exact"},{"name":"normal macroautophagy during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006294"}


id: PBO:0053877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1153","termid":"PBO:0053877"}


id: GO:0061455
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the muscle cell projection membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dph","GOC:tb","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of muscle cell projection membrane (obsolete GO:0061455)","synonyms":[{"name":"integral to muscle cell projection membrane","type":"exact"}],"termid":"GO:0061455"}


id: PATO:0000749
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000749 gait value (obsolete PATO:0000749)","termid":"PATO:0000749"}


id: PBO:0000902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR88","termid":"PBO:0000902"}


id: PBO:0087753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex; involved in the formation of Q-tRNAQ; mutation is functionally complemented by the bacterial GatB ortholog","termid":"PBO:0087753"}


id: PBO:0080032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 18","termid":"PBO:0080032"}


id: PBO:0072311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 8","termid":"PBO:0072311"}


id: PBO:0029214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-galactose_absent_from_cell_wall","termid":"PBO:0029214"}


id: PBO:0088357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase","termid":"PBO:0088357"}


id: GO:0035831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of palmatine, a berberine alkaloid found in many plants.","definition_xrefs":["GOC:yaf","PMID:21327819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid biosynthetic process","termid":"GO:0033075"},{"relation_name":"is_a","term_name":"palmatine metabolic process","termid":"GO:0035830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"palmatine biosynthetic process","synonyms":[{"name":"palmatine anabolism","type":"exact"},{"name":"palmatine biosynthesis","type":"exact"},{"name":"palmatine formation","type":"exact"},{"name":"palmatine synthesis","type":"exact"}],"termid":"GO:0035831"}


id: GO:0035823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gene conversion process in which a segment of about 50-200 base pairs is transferred from the donor to the acceptor.","definition_xrefs":["PMID:16954385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"short tract gene conversion","termid":"GO:0035823"}


id: GO:0034850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isooctane + 1/2 O2 = 2,4,4-trimethyl-1-pentanol.","definition_xrefs":["UM-BBD_reactionID:r1269"],"gene_count":0,"genotype_count":0,"name":"obsolete isooctane monooxygenase activity (obsolete GO:0034850)","termid":"GO:0034850"}


id: FYPO:0005497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements does not occur.","definition_xrefs":["PomBase:mah","PMID:26108447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription from RNA polymerase II promoter","termid":"FYPO:0003796"},{"relation_name":"is_a","term_name":"decreased transcription from CRE promoter","termid":"FYPO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished transcription from CRE promoter","synonyms":[{"name":"abolished transcription from CRE promoter during mitotic cell cycle","type":"related"},{"name":"abolished transcription from CRE promoter during vegetative growth","type":"exact"},{"name":"expression of CRE target genes abolished","type":"related"},{"name":"transcription from CRE promoter abolished","type":"exact"}],"termid":"FYPO:0005497"}


id: MONDO:0009068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cytochrome-c oxidase deficiency disease (obsolete MONDO:0009068)","secondary_identifiers":["GARD:48","NORD:1030"],"synonyms":[{"name":"Cytochrome C Oxidase Deficiency","type":"exact"}],"termid":"MONDO:0009068","xrefs":{"Monarch":{"xref_id":"0009068"}}}


id: PBO:0040611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAIAP2 divergent transcript","termid":"PBO:0040611"}


id: PBO:0034213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_mimicry_relationship_with","termid":"PBO:0034213"}


id: PBO:0001665
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shwachman-Bodian-Diamond syndrome","termid":"PBO:0001665"}


id: MONDO:0014415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein, decreased urinary activity of","secondary_identifiers":["OMIM:615953","UMLS:C1835808","MEDGEN:322759","MESH:C563653"],"synonyms":[{"name":"kallikrein, decreased urinary activity of","type":"exact"}],"termid":"MONDO:0014415","xrefs":{"Monarch":{"xref_id":"0014415"}}}


id: GO:0060845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a venous endothelial cell fate and its capacity to differentiate into an venous endothelial cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell fate commitment","termid":"GO:0060846"},{"relation_name":"part_of","term_name":"venous endothelial cell differentiation","termid":"GO:0060843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous endothelial cell fate commitment","termid":"GO:0060845"}


id: PBO:0045665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin associated protein","termid":"PBO:0045665"}


id: GO:0048666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron development","termid":"GO:0048666"}


id: MONDO:0013039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3-M syndrome in which the cause of the disease is a mutation in the OBSL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-M syndrome","termid":"MONDO:0007477"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"3M syndrome 2","secondary_identifiers":["MESH:C567862","OMIM:612921","GARD:15591","UMLS:C2752041","MEDGEN:414168"],"synonyms":[{"name":"3-M syndrome 2","type":"exact"},{"name":"3-M syndrome caused by mutation in OBSL1","type":"exact"},{"name":"3M syndrome 2","type":"exact"},{"name":"3M2","type":"related"},{"name":"OBSL1 3-M syndrome","type":"exact"},{"name":"three M syndrome 2","type":"exact"},{"name":"three M syndrome type 2","type":"exact"}],"termid":"MONDO:0013039","xrefs":{"Monarch":{"xref_id":"0013039"}}}


id: PBO:0086511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; deletion confers sensitivity to citric acid; predicted protein would include a thiol-disulfide oxidoreductase active site","termid":"PBO:0086511"}


id: PBO:0042618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin licensing and DNA replication factor 1","termid":"PBO:0042618"}


id: PR:Q9C0U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps5 gene.","definition_xrefs":["UniProtKB:Q9C0U7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein vps5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPJ732.01","synonyms":[{"name":"Spom972h-vps5","type":"exact"}],"termid":"PR:Q9C0U7"}


id: MONDO:0020576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the blood vessel wall characterized by palpable purpura.","definition_xrefs":["NCIT:C112210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous vasculitis","secondary_identifiers":["MEDGEN:488809","UMLS:C0262988"],"synonyms":[{"name":"cutaneous vasculitis","type":"exact"}],"termid":"MONDO:0020576","xrefs":{"Monarch":{"xref_id":"0020576"}}}


id: GO:0060473
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory vesicle that is stored under the cell membrane of an egg. These vesicles fuse with the egg plasma membrane as part of egg activation and are part of the block to polyspermy.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"cortical granule","synonyms":[{"name":"cortical vesicle","type":"related"}],"termid":"GO:0060473"}


id: MONDO:0019812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tricuspid valve prolapse (obsolete MONDO:0019812)","termid":"MONDO:0019812","xrefs":{"Monarch":{"xref_id":"0019812"}}}


id: GO:0047950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + O2 = glutathione disulfide + H2O2.","definition_xrefs":["EC:1.8.3.3","RHEA:24112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glutathione oxidase activity","secondary_identifiers":["MetaCyc:GLUTATHIONE-OXIDASE-RXN","KEGG_REACTION:R00120"],"synonyms":[{"name":"glutathione:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047950"}


id: GO:0051657
data:
  {"annotated_genes":["SJAG_00053","SJAG_03170","SJAG_01116","SJAG_04221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92255,59710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[108975,117204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which an organelle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_03170":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of organelle location","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"maintenance of organelle localization","type":"related"}],"termid":"GO:0051657","terms_by_termid":{"GO:0051685":null,"GO:1990854":null}}


id: PBO:0078237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 19","termid":"PBO:0078237"}


id: MONDO:0018021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete erythrokeratoderma variabilis progressiva (obsolete MONDO:0017681)","termid":"MONDO:0017681"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic nail anomaly (obsolete MONDO:0019285)","termid":"MONDO:0019285"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic hearing loss (obsolete MONDO:0019589)","termid":"MONDO:0019589"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary alopecia (obsolete MONDO:0021034)","termid":"MONDO:0021034"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis-deafness syndrome","secondary_identifiers":["MEDGEN:1679303","UMLS:C5190988","GARD:21504","Orphanet:330029"],"termid":"MONDO:0018021","xrefs":{"Monarch":{"xref_id":"0018021"}}}


id: PBO:0038876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 3","termid":"PBO:0038876"}


id: GO:0010905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of UDP-glucose catabolism. UDP-glucose catabolic processes are the chemical reactions and pathways resulting in the breakdown of UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of UDP-glucose catabolic process","termid":"GO:0010904"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"UDP-alpha-D-glucose catabolic process","termid":"GO:0006258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of UDP-glucose catabolic process","synonyms":[{"name":"negative regulation of UDP-glucose catabolism","type":"exact"}],"termid":"GO:0010905"}


id: GO:0033291
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of the large and small ribosomal subunits, methionyl-initiatior tRNA, and the capped mRNA. The initiator tRNA is positioned at the ribosomal P site at the AUG codon corresponding to the beginning of the coding region.","definition_xrefs":["PMID:15145049","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation complex","termid":"GO:0070992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"eukaryotic 80S initiation complex","termid":"GO:0033291"}


id: PBO:0048178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase regulator","termid":"PBO:0048178"}


id: GO:0007384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the thoracic segments following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, trunk","termid":"GO:0035292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, thorax","termid":"GO:0007384"}


id: GO:1900064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peroxisome organization.","definition_xrefs":["PMID:7500953","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of peroxisome organization","termid":"GO:1900063"},{"relation_name":"positively_regulates","term_name":"peroxisome organization","termid":"GO:0007031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0008150","GO:0007031"],"is_obsolete":false,"name":"positive regulation of peroxisome organization","synonyms":[{"name":"activation of peroxisome organisation","type":"narrow"},{"name":"activation of peroxisome organization","type":"narrow"},{"name":"activation of peroxisome organization and biogenesis","type":"related"},{"name":"activation of peroxisome-assembly ATPase activity","type":"related"},{"name":"positive regulation of peroxisome organisation","type":"exact"},{"name":"positive regulation of peroxisome organization and biogenesis","type":"related"},{"name":"positive regulation of peroxisome-assembly ATPase activity","type":"related"},{"name":"up regulation of peroxisome organisation","type":"exact"},{"name":"up regulation of peroxisome organization","type":"related"},{"name":"up regulation of peroxisome organization and biogenesis","type":"related"},{"name":"up regulation of peroxisome-assembly ATPase activity","type":"related"},{"name":"up-regulation of peroxisome organisation","type":"exact"},{"name":"up-regulation of peroxisome organization","type":"related"},{"name":"up-regulation of peroxisome organization and biogenesis","type":"related"},{"name":"up-regulation of peroxisome-assembly ATPase activity","type":"related"},{"name":"upregulation of peroxisome organisation","type":"exact"},{"name":"upregulation of peroxisome organization","type":"related"},{"name":"upregulation of peroxisome organization and biogenesis","type":"related"},{"name":"upregulation of peroxisome-assembly ATPase activity","type":"related"}],"termid":"GO:1900064"}


id: MONDO:0018587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"non-recovering obstetric brachial plexus lesion","secondary_identifiers":["Orphanet:439202","MEDGEN:1810145","UMLS:C5680048","GARD:21826"],"synonyms":[{"name":"chronic obstetric brachial plexus injury","type":"exact"},{"name":"chronic obstetric brachial plexus palsy","type":"exact"},{"name":"non-recovering OBPI","type":"exact"},{"name":"non-recovering OBPL","type":"exact"}],"termid":"MONDO:0018587","xrefs":{"Monarch":{"xref_id":"0018587"}}}


id: MONDO:0005916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The clinical condition in which any part of the placenta invades and is inseparable from the uterine wall. (reVITALize)","definition_xrefs":["NCIT:C26856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta accreta","secondary_identifiers":["EFO:0007440","Orphanet:662721","DOID:4744","icd11.foundation:298160226","SCTID:70129008","UMLS:C0032044","MEDGEN:10780","MESH:D010921"],"synonyms":[{"name":"Increta, placenta","type":"related"},{"name":"Percreta, placenta","type":"related"},{"name":"accreta, placenta","type":"related"},{"name":"placenta Increta","type":"related"},{"name":"placenta Percreta","type":"related"}],"termid":"MONDO:0005916","xrefs":{"Monarch":{"xref_id":"0005916"}}}


id: MONDO:0003312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of rare neoplasms that arise from the ovary. It includes low grade endometrioid stromal sarcoma and undifferentiated sarcoma.","definition_xrefs":["NCIT:C40065"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian sarcoma","termid":"MONDO:0002225"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"},{"relation_name":"is_a","term_name":"endometrioid stromal and related neoplasms","termid":"MONDO:0037742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian endometrioid stromal and related neoplasms","secondary_identifiers":["UMLS:C4288544","MEDGEN:926076","DOID:5169"],"synonyms":[{"name":"endometrioid stromal and related neoplasms of ovary","type":"exact"},{"name":"ovarian endometrioid stromal and related neoplasms","type":"exact"},{"name":"ovarian endometrioid stromal sarcoma","type":"related"},{"name":"ovary endometrioid stromal and related neoplasms","type":"exact"}],"termid":"MONDO:0003312","xrefs":{"Monarch":{"xref_id":"0003312"}}}


id: GO:0021958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the dorsal root ganglion towards target cells in the medulla. This axonal process is a member of those that make up the gracilis tract, a group of axons that are from neurons involved in proprioception from the lower trunk and lower limb.","definition_xrefs":["GOC:jid","PMID:12867698","GOC:dph","GOC:dgh","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gracilis tract morphogenesis","synonyms":[{"name":"tract of Goll morphogenesis","type":"exact"}],"termid":"GO:0021958"}


id: GO:0002776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an antimicrobial peptide from a cell or a tissue. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15638771","PMID:11807545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"},{"relation_name":"part_of","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0010467","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"antimicrobial peptide secretion","termid":"GO:0002776"}


id: PBO:0072162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 39","termid":"PBO:0072162"}


id: GO:0007532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mating-type specific process that modulates the frequency, rate or extent of cellular DNA-templated transcription.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"mating type determination","termid":"GO:0007531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"regulation of mating-type specific transcription, DNA-templated","synonyms":[{"name":"mating-type specific transcriptional control","type":"exact"},{"name":"regulation of mating-type specific transcription, DNA-dependent","type":"exact"}],"termid":"GO:0007532"}


id: GO:0046920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->3) linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"alpha-(1->3)-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9605609","Reactome:R-HSA-9605644","Reactome:R-HSA-9605682","Reactome:R-HSA-9603984"],"synonyms":[{"name":"alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:0046920"}


id: PBO:0062472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 163 pseudogene","termid":"PBO:0062472"}


id: GO:0030339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain-acyl ethyl ester + H2O = a long-chain carboxylic acid + ethanol.","definition_xrefs":["EC:3.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"fatty-acyl-ethyl-ester synthase activity","secondary_identifiers":["RHEA:16641","MetaCyc:FATTY-ACYL-ETHYL-ESTER-SYNTHASE-RXN"],"synonyms":[{"name":"FAEE synthase activity","type":"related"},{"name":"FAEES activity","type":"related"},{"name":"fatty-acyl ethyl ester synthase","type":"exact"},{"name":"long-chain-fatty-acyl-ethyl-ester acylhydrolase activity","type":"related"}],"termid":"GO:0030339"}


id: MONDO:0957912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory and toxic neuropathy that is characaterized by a collection of neuropsychological symptoms associated with repeated organophosphate pesticide exposure as well as nerve agent exposure. Symptoms can appear weeks after exposure and include muscle weakness, anxiety, depression, psychosis as well as cognitive and memory deficits.","definition_xrefs":["DOID:0081393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"organophosphate-induced delayed polyneuropathy","termid":"MONDO:0957912","xrefs":{"Monarch":{"xref_id":"0957912"}}}


id: MONDO:0014166
data:
  {"annotated_genes":["SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87796],"is_not":false,"summary":null,"term":"MONDO:0014166"}]},"cv_name":"mondo","definition":"Any paroxysmal nocturnal hemoglobinuria in which the cause of the disease is a mutation in the PIGT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal nocturnal hemoglobinuria","termid":"MONDO:0100244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005240","MONDO:0005066","MONDO:0024322","MONDO:0002280"],"is_obsolete":false,"name":"paroxysmal nocturnal hemoglobinuria 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:815699","UMLS:C3809369","OMIM:615399","GARD:15958"],"synonyms":[{"name":"PIGT paroxysmal nocturnal hemoglobinuria","type":"exact"},{"name":"PNH2","type":"related"},{"name":"paroxysmal nocturnal hemoglobinuria 2","type":"exact"},{"name":"paroxysmal nocturnal hemoglobinuria 2, autosomal dominant, somatic mutation","type":"exact"},{"name":"paroxysmal nocturnal hemoglobinuria caused by mutation in PIGT","type":"exact"},{"name":"paroxysmal nocturnal hemoglobinuria type 2","type":"exact"}],"termid":"MONDO:0014166","terms_by_termid":{"MONDO:0014166":null},"xrefs":{"Monarch":{"xref_id":"0014166"}}}


id: PBO:0081855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger family member 788, pseudogene","termid":"PBO:0081855"}


id: GO:0032737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate, or extent of interleukin-14 production.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of interleukin-14 production (obsolete GO:0032737)","synonyms":[{"name":"activation of interleukin-14 production","type":"narrow"},{"name":"positive regulation of IL-14 production","type":"exact"},{"name":"positive regulation of interleukin-14 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-14 production","type":"narrow"},{"name":"up regulation of interleukin-14 production","type":"exact"},{"name":"up-regulation of interleukin-14 production","type":"exact"},{"name":"upregulation of interleukin-14 production","type":"exact"}],"termid":"GO:0032737"}


id: PBO:0044426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 52, pseudogene","termid":"PBO:0044426"}


id: PBO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 2 pseudogene 1","termid":"PBO:0043579"}


id: GO:0072389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"},{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"flavin adenine dinucleotide catabolic process","synonyms":[{"name":"FAD or FADH2 catabolic process","type":"exact"},{"name":"flavin adenine dinucleotide breakdown","type":"exact"},{"name":"flavin adenine dinucleotide catabolism","type":"exact"},{"name":"flavin adenine dinucleotide degradation","type":"exact"}],"termid":"GO:0072389"}


id: GO:0106408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP = 3',3'-c-di-AMP + 2 diphosphate.","definition_xrefs":["RHEA:35655","PMID:30884174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"diadenylate cyclase activity","secondary_identifiers":["EC:2.7.7.85","MetaCyc:RXN-14338"],"synonyms":[{"name":"cyclic-di-AMP synthase","type":"exact"}],"termid":"GO:0106408"}


id: MONDO:0007203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blue rubber bleb nevus (BRBNS) is a rare vascular malformation disorder with cutaneous and visceral lesions frequently associated with serious, potentially fatal bleeding and anemia.","definition_xrefs":["Orphanet:1059"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital hemangioma","termid":"MONDO:0018715"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"blue rubber bleb nevus","secondary_identifiers":["UMLS:C0346072","MESH:C536240","GARD:5940","NANDO:2201027","NCIT:C4486","NORD:865","OMIM:112200","MEDGEN:83401","SCTID:254784002"],"synonyms":[{"name":"BRBN","type":"exact"},{"name":"BRBNS","type":"exact"},{"name":"Blue Rubber Bleb Nevus syndrome","type":"exact"},{"name":"bean syndrome","type":"exact"},{"name":"blue rubber bleb nevus","type":"exact"},{"name":"blue rubber bleb nevus syndrome","type":"exact"}],"termid":"MONDO:0007203","xrefs":{"Monarch":{"xref_id":"0007203"}}}


id: PBO:0036088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclease_activity_during_nitrogen_starvation","termid":"PBO:0036088"}


id: GO:0019745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"},{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"pentacyclic triterpenoid biosynthetic process","synonyms":[{"name":"pentacyclic triterpenoid anabolism","type":"exact"},{"name":"pentacyclic triterpenoid biosynthesis","type":"exact"},{"name":"pentacyclic triterpenoid formation","type":"exact"},{"name":"pentacyclic triterpenoid synthesis","type":"exact"}],"termid":"GO:0019745"}


id: PBO:0000714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-1,3-beta-glucanase Eng1","termid":"PBO:0000714"}


id: PBO:0078101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 9","termid":"PBO:0078101"}


id: GO:0009978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 13(S)-hydroperoxylinolenate = 12,13(S)-epoxylinolenate + H2O.","definition_xrefs":["EC:4.2.1.92","PMID:9778849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"allene oxide synthase activity","secondary_identifiers":["RHEA:25074","GO:0047987","MetaCyc:RXN1F-19"],"synonyms":[{"name":"(9Z,11E,14Z)-(13S)-hydroperoxyoctadeca-9,11,14-trienoate 12,13-hydro-lyase [(9Z)-(13S)-12,13-epoxyoctadeca-9,11-dienoate-forming]","type":"related"},{"name":"(9Z,11E,14Z)-(13S)-hydroperoxyoctadeca-9,11,14-trienoate 12,13-hydro-lyase activity","type":"related"},{"name":"HPI","type":"related"},{"name":"hydroperoxide dehydratase activity","type":"related"},{"name":"hydroperoxide isomerase activity","type":"related"},{"name":"linoleate hydroperoxide isomerase","type":"related"},{"name":"linoleic acid hydroperoxide isomerase","type":"related"}],"termid":"GO:0009978"}


id: PBO:0089778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific serine/threonine protein kinase (NDR family) Mug27/Slk1","termid":"PBO:0089778"}


id: GO:0004508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a C21-steroid + O2 + reduced [NADPH--hemoprotein reductase] = a 17alpha-hydroxy-C21-steroid + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:65760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"steroid 17-alpha-monooxygenase activity","secondary_identifiers":["Reactome:R-HSA-9035954","Reactome:R-HSA-193068","Reactome:R-HSA-9035956","MetaCyc:STEROID-17-ALPHA-MONOOXYGENASE-RXN","Reactome:R-HSA-193072","Reactome:R-HSA-193070","Reactome:R-HSA-5601843","EC:1.14.14.19","Reactome:R-HSA-193099"],"synonyms":[{"name":"17alpha-hydroxylase-C17,20 lyase activity","type":"related"},{"name":"cytochrome P-450 (P-45017alpha,lyase)","type":"related"},{"name":"cytochrome P450 CYP17","type":"narrow"},{"name":"cytochrome P45017alpha","type":"related"},{"name":"cytochrome p450 XVIIA1 activity","type":"narrow"},{"name":"steroid 17-alpha-hydroxylase activity","type":"exact"},{"name":"steroid 17-alpha-hydroxylase-C17-20 lyase activity","type":"exact"},{"name":"steroid 17-alpha-hydroxylase/17,20 lyase activity","type":"related"},{"name":"steroid 17alpha-hydroxylase activity","type":"related"},{"name":"steroid 17alpha-monooxygenase activity","type":"related"},{"name":"steroid 17alphahydroxylase/17,20 lyase activity","type":"related"},{"name":"steroid,hydrogen-donor:oxygen oxidoreductase (17alpha-hydroxylating)","type":"related"}],"termid":"GO:0004508"}


id: PBO:0086166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for spore wall formation; subunit of leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms ring-like structure at leading edge of prospore membrane during meiosis II; mediates assembly of LEP complex, formation of ring-like structure via interaction with spindle pole body components, and prospore membrane maturation; potentially phosphorylated by Cdc28p; ADY3 has a paralog, CNM67, that arose from the whole genome duplication","termid":"PBO:0086166"}


id: RO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x starts with y if and only if x has part y and the time point at which x starts is equivalent to the time point at which y starts. Formally: α(y) = α(x) ∧ ω(y) < ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"},{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_with","termid":"RO:0002224"}


id: SO:0000113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A viral sequence which has integrated into a host genome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proviral_region","synonyms":[{"name":"proviral region","type":"exact"},{"name":"proviral sequence","type":"related"}],"termid":"SO:0000113"}


id: PBO:0043614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 4 pseudogene 2","termid":"PBO:0043614"}


id: PBO:0044591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developing brain homeobox 2","termid":"PBO:0044591"}


id: GO:0090184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:tb","GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"positively_regulates","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of kidney development","synonyms":[{"name":"positive regulation of nephrogenesis","type":"related"}],"termid":"GO:0090184"}


id: MONDO:0002036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the penis. Representative examples of non-neoplastic disorders include phimosis, balanitis, and hypospadias. Representative examples of neoplastic disorders include hemangioma, penile intraepithelial neoplasia, and penile carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penile disorder","secondary_identifiers":["ICD9:607.9","ICD9:607.89","DOID:1529","SCTID:33958003","ICD9:607.8","MESH:D010409","MEDGEN:10627","UMLS:C0030846","NCIT:C26846"],"synonyms":[{"name":"disease of penis","type":"exact"},{"name":"disease or disorder of penis","type":"exact"},{"name":"disorder of penis","type":"exact"},{"name":"penile disease","type":"exact"},{"name":"penile disorder","type":"exact"},{"name":"penis disease","type":"exact"},{"name":"penis disease or disorder","type":"exact"}],"termid":"MONDO:0002036","xrefs":{"Monarch":{"xref_id":"0002036"}}}


id: PBO:0116284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mg2+-dependent phosphatidate (PA) phosphatase; dephosphorylates PA to yield diacylglycerol; regulates phospholipid synthesis, nuclear/ER membrane growth, lipid droplet formation, triacylglycerol synthesis, vacuolar homeostasis and cell wall integrity; phosphorylated by Hsl1p, Pho85p/Pho80p, Cdc28p/Cyclin B, PKA, PKC, and CKII, regulating activity, localization, and proteosomal degradation; homolog of mammalian lipins 1 and 2; human homologs LPIN1, LPIN2, LPIN3 complement the null","termid":"PBO:0116284"}


id: PBO:0042876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 144","termid":"PBO:0042876"}


id: GO:1902636
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ciliary basal body that is part of a kinocilium.","definition_xrefs":["GO_REF:0000064","GOC:TermGenie","PMID:15855039","PMID:15882574","GOC:cilia","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"kinocilium","termid":"GO:0060091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"kinociliary basal body","synonyms":[{"name":"cilial basal body of kinocilium","type":"exact"},{"name":"ciliary basal body of kinocilium","type":"exact"},{"name":"cilium basal body of kinocilium","type":"exact"},{"name":"kinocilial basal body","type":"exact"},{"name":"kinocilium basal body","type":"exact"},{"name":"kinocilium ciliary basal body","type":"exact"},{"name":"microtubule basal body of kinocilium","type":"exact"}],"termid":"GO:1902636"}


id: PBO:0066455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 8, pseudogene","termid":"PBO:0066455"}


id: PR:Q9P7B5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC521.02 gene.","definition_xrefs":["UniProtKB:Q9P7B5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent metalloprotease WSS1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC521.02","synonyms":[{"name":"DNA damage response protein WSS1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC521.02","type":"exact"}],"termid":"PR:Q9P7B5"}


id: GO:0140947
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112470],"is_not":false,"summary":null,"term":"GO:0140947"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N6,N6-dimethyl-L-lysyl9-[histone H3] + S-adenosyl-L-methionine = H+ + N6,N6,N6-trimethyl-L-lysyl9-[histone H3] + S-adenosyl-L-homocysteine. This reaction is the addition of a single methyl group to the dimethylated lysine residue at position 9 of histone H3, producing histone H3K9me3.","definition_xrefs":["RHEA:60280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0008276","GO:0140096","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"histone H3K9me2 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.366"],"synonyms":[{"name":"histone H3-K9 trimethylation","type":"broad"},{"name":"histone H3K9 trimethylation","type":"broad"},{"name":"histone H3K9me2 methylase activity","type":"exact"},{"name":"histone dimethyl-lysine(H3K9) N-methyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140947","terms_by_termid":{"GO:0140947":null}}


id: FYPO:0000628
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K 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process","references_by_uniquename":{"PMID:21802294":null,"PMID:22300943":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:24699070":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27059155":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33495454":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_01745","SJAG_05207","SJAG_01050","SJAG_01242","SJAG_03940","SJAG_01956","SJAG_01330","SJAG_04912","SJAG_00370","SJAG_03891","SJAG_04697","SJAG_01906","SJAG_03783","SJAG_00266","SJAG_04284","SJAG_01143","SJAG_03360","SJAG_03143","SJAG_02252","SJAG_02392","SJAG_04280","SJAG_03596","SJAG_04703","SJAG_04464","SJAG_04349","SJAG_03892","SJAG_04522","SJAG_01787","SJAG_03444","SJAG_04551","SJAG_03351","SJAG_01374","SJAG_02763","SJAG_03449","SJAG_04489","SJAG_00610","SJAG_03575","SJAG_01834","SJAG_00118","SJAG_04332","SJAG_03250","SJAG_00409","SJAG_00426","SJAG_03689","SJAG_02592","SJAG_02796","SJAG_00514"],"single_locus_genotype_uniquenames":["cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","pck1delta","nem1delta","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","did4delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","gms1delta","alx1delta","dcr1delta","man1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","mid2delta","vps4delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","ned1delta","pom152delta","mad2delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","lem2delta","vps24delta","mid1delta","pom1delta","ace2delta","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","sty1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","erg1delta","nup61delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","vps25delta","atf1delta","ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type","scd1delta","shc1delta","pck2delta","for3delta","sst4delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","agn1delta","vps32delta","nur1delta","sep1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","rga4delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","vps28delta","nup132delta","gpd1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta"],"termid":"FYPO:0000628","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYECO:0000314":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000118":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000356":null,"FYPO:0000595":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0000731":null,"FYPO:0000815":null,"FYPO:0001038":null,"FYPO:0001132":null,"FYPO:0001327":null,"FYPO:0001369":null,"FYPO:0001370":null,"FYPO:0001375":null,"FYPO:0001440":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001838":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0002870":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003738":null,"FYPO:0003779":null,"FYPO:0003946":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0004105":null,"FYPO:0004205":null,"FYPO:0004318":null,"FYPO:0004573":null,"FYPO:0004718":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0005503":null,"FYPO:0005957":null,"FYPO:0006054":null,"FYPO:0006433":null,"FYPO:0006545":null,"FYPO:0006557":null,"FYPO:0006945":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007363":null,"FYPO:0007701":null,"FYPO:0007770":null,"FYPO:0007771":null,"FYPO:0007772":null,"FYPO:0007783":null,"FYPO:0007824":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null,"GO:0000815":null}}


id: PBO:0085773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII-coated vesicles; involved in vesicle formation and incorporation of specific secretory cargo; protein abundance increases in response to DNA replication stress","termid":"PBO:0085773"}


id: PBO:0048042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrous sheath interacting protein 2 like, pseudogene","termid":"PBO:0048042"}


id: MONDO:0011221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weyers ulnar ray/oligodactyly syndrome","secondary_identifiers":["UMLS:C1865566","MEDGEN:356030","MESH:C536696","OMIM:602418"],"synonyms":[{"name":"Weyers ulnar ray/oligodactyly syndrome","type":"exact"}],"termid":"MONDO:0011221","xrefs":{"Monarch":{"xref_id":"0011221"}}}


id: MONDO:0021228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the brainstem.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brainstem neoplasm","secondary_identifiers":["MEDGEN:146207","UMLS:C0677866","EFO:1001767","NCIT:C4869","Orphanet:36414"],"synonyms":[{"name":"Brain stem neoplasm","type":"exact"},{"name":"brain stem tumor","type":"exact"},{"name":"brain stem tumour","type":"exact"},{"name":"brainstem neoplasm (disease)","type":"exact"},{"name":"brainstem tumor","type":"exact"},{"name":"brainstem tumour","type":"exact"},{"name":"neoplasm of brain stem","type":"exact"},{"name":"neoplasm of brainstem","type":"exact"},{"name":"neoplasm of the brain stem","type":"exact"},{"name":"neoplasm of the brainstem","type":"exact"},{"name":"tumor of brain stem","type":"exact"},{"name":"tumor of brainstem","type":"exact"},{"name":"tumor of the brain stem","type":"exact"},{"name":"tumor of the brainstem","type":"exact"},{"name":"tumour of brain stem","type":"exact"},{"name":"tumour of brainstem","type":"exact"},{"name":"tumour of the brain stem","type":"exact"},{"name":"tumour of the brainstem","type":"exact"}],"termid":"MONDO:0021228","xrefs":{"Monarch":{"xref_id":"0021228"}}}


id: GO:1905676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adaptive immune memory response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26831526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response","termid":"GO:0002821"},{"relation_name":"is_a","term_name":"regulation of adaptive immune memory response","termid":"GO:1905674"},{"relation_name":"positively_regulates","term_name":"adaptive immune memory response","termid":"GO:0090716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adaptive immune memory response","synonyms":[{"name":"activation of adaptive immune memory response","type":"narrow"},{"name":"up regulation of adaptive immune memory response","type":"exact"},{"name":"up-regulation of adaptive immune memory response","type":"exact"},{"name":"upregulation of adaptive immune memory response","type":"exact"}],"termid":"GO:1905676"}


id: MONDO:0020502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Yellow fever (YF), caused by YF virus, is a zoonotic disease characterized by fever and constitutional symptoms, with the potential to progress to severe and fatal viral hemorrhagic fever with shock and multi-organ system failure.","definition_xrefs":["Orphanet:99829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"arbovirus fever","termid":"MONDO:0018093"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow fever","secondary_identifiers":["DOID:9682","ICD9:060","NORD:1873","GARD:7914","MEDGEN:53112","UMLS:C0043395","icd11.foundation:383352795","NCIT:C35547","MESH:D015004","ICD9:060.9","MedDRA:10048240"],"synonyms":[{"name":"YF","type":"exact"},{"name":"Yellow Jack","type":"exact"},{"name":"Yellow fever Virus infection","type":"exact"},{"name":"Yellow fever virus caused disease or disorder","type":"exact"},{"name":"Yellow fever virus disease or disorder","type":"exact"},{"name":"Yellow fever virus infectious disease","type":"exact"},{"name":"Yellow fever, sylvan","type":"exact"},{"name":"bronze John","type":"exact"},{"name":"jungle yellow fever","type":"exact"},{"name":"sylvatic yellow fever","type":"exact"},{"name":"urban yellow fever","type":"exact"}],"termid":"MONDO:0020502","xrefs":{"Monarch":{"xref_id":"0020502"}}}


id: GO:0046493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipid A, the glycolipid group of bacterial lipopolysaccharides, consisting of four to six fatty acyl chains linked to two glucosamine residues. Further modifications of the backbone are common.","definition_xrefs":["PMID:20974832","PMID:22216004","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid A metabolic process","synonyms":[{"name":"lipid A metabolism","type":"exact"}],"termid":"GO:0046493"}


id: PBO:0063573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"period circadian regulator 3","termid":"PBO:0063573"}


id: MONDO:0023243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The Glass-Chapman-Hockley syndrome is a very rare disease. To date, the syndrome has only been reported in one family with five members affected in three generations. The first patients were two brothers that had an abnormally-shaped head due to coronal craniosynostosis. Their mother, maternal aunt, and maternal grandmother were also found to have the syndrome. The signs and symptoms varied from person to person; however, the signs and symptoms included coronal craniosynostosis, small middle part of the face (midfacial hypoplasia), and short fingers (brachydactyly).The inheritance is thought to be autosomal dominant. No genes have been identified for this syndrome. Treatment included surgery to correct the craniosynostosis. No issues with development and normal intelligence were reported. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["GARD:0002479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"glass-chapman-hockley syndrome","secondary_identifiers":["SCTID:720814001","Orphanet:1535"],"synonyms":[{"name":"craniosynostosis - dysmorphism - brachydactyly","type":"related"},{"name":"craniosynostosis brachydactyly","type":"related"},{"name":"craniosynostosis with facial dysmorphism and brachydactyly syndrome","type":"exact"},{"name":"craniosynostosis-dysmorphism-brachydactyly syndrome","type":"related"},{"name":"glass chapman hockley syndrome","type":"related"}],"termid":"MONDO:0023243","xrefs":{"Monarch":{"xref_id":"0023243"}}}


id: MONDO:0018307
data:
  {"annotated_genes":["SJAG_03866","SJAG_05277","SJAG_04757","SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88768,88769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011706"},{"annotations":[88754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010476"},{"annotations":[87471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014290"}]},"cv_name":"mondo","definition":"Neurodegeneration with brain iron accumulation (NBIA, formerly Hallervorden-Spatz syndrome) encompasses a group of rare neurodegenerative disorders characterized by progressive extrapyramidal dysfunction (dystonia, rigidity, choreoathetosis), iron accumulation in the brain and the presence of axonal spheroids, usually limited to the central nervous system.","definition_xrefs":["Orphanet:385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron metabolism disease","termid":"MONDO:0002279"},{"relation_name":"is_a","term_name":"neuroaxonal dystrophy","termid":"MONDO:0002283"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_03866":null,"SJAG_04757":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C538421","UMLS:C2931845","NANDO:2100241","MEDGEN:444156","GARD:11899","icd11.foundation:440483530","OMIMPS:234200","DOID:0110734"],"synonyms":[{"name":"NBIA","type":"exact"},{"name":"neurodegeneration with brain iron accumulation","type":"exact"}],"termid":"MONDO:0018307","terms_by_termid":{"MONDO:0010476":null,"MONDO:0011706":null,"MONDO:0014290":null},"xrefs":{"Monarch":{"xref_id":"0018307"}}}


id: PBO:0109619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 11 pseudogene","termid":"PBO:0109619"}


id: PBO:0082035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase; catalyzes the acylation of lysophosphatidic acid to form phosphatidic acid, a key intermediate in lipid metabolism; enzymatic activity detected in lipid particles and microsomes","termid":"PBO:0082035"}


id: FYPO:0003454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus","termid":"FYPO:0003453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to nucleus during meiosis I","synonyms":[{"name":"ectopic protein localization to nucleus during meiosis I","type":"exact"},{"name":"protein mislocalised to nucleus during meiosis I","type":"exact"},{"name":"protein mislocalized to nucleus during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003454"}


id: GO:0034563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-bis(4-hydroxyphenyl)-1,2-propanediol + O2 = 4-hydroxyphenacyl alcohol + 4-hydroxybenzoate + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-bis(4-hydroxyphenyl)-1,2-propanediol dioxygenase activity (obsolete GO:0034563)","termid":"GO:0034563"}


id: PBO:0090884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex tRNA uridine(34) acetyltransferase subunit Elp3","termid":"PBO:0090884"}


id: PBO:0086806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YDL218W transcription is regulated by Azf1p and induced by starvation and aerobic conditions; expression also induced in cells treated with the mycotoxin patulin","termid":"PBO:0086806"}


id: PBO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP binding enzyme (predicted)","termid":"PBO:0000542"}


id: FYPO:0006538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid during a cellular response to a pheromone. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"spheroid cell during cellular response to pheromone","synonyms":[{"name":"cell morphology, round cells during cellular response to pheromone","type":"related"},{"name":"cell morphology, rounded cells during cellular response to pheromone","type":"related"},{"name":"rounded cell during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0006538"}


id: PBO:0031303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sensitivity_to_chemical_during_vegetative_growth","termid":"PBO:0031303"}


id: PBO:0027937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_oxygen_consumption_during_vegetative_growth","termid":"PBO:0027937"}


id: PBO:0088041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); catalytic subunit of SCF ubiquitin-protein ligase complex (together with Skp1p, Rbx1p, Cdc53p, and an F-box protein) that regulates cell cycle progression by targeting key substrates for degradation; protein abundance increases in response to DNA replication stress; human CDC34 functionally complements the thermosensitivity of the cdc34-2 mutant","termid":"PBO:0088041"}


id: PR:O74356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC25D12.06 gene.","definition_xrefs":["UniProtKB:O74356","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase C25D12.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.06","synonyms":[{"name":"Spom972h-SPBC25D12.06","type":"exact"}],"termid":"PR:O74356"}


id: MONDO:0018957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pudendal neuralgia (PN) is a chronic neuropathic pain, aggravated by sitting and for which no organic cause can be found by imaging studies. It is often associated with pelvic dysfunction.","definition_xrefs":["Orphanet:60039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"},{"relation_name":"is_a","term_name":"neuralgia","termid":"MONDO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"pudendal neuralgia","secondary_identifiers":["SCTID:427972000","MEDGEN:372681","icd11.foundation:1492963618","GARD:10713","MESH:D060545","UMLS:C1997249","ICD9:729.2"],"synonyms":[{"name":"Alcock syndrome","type":"exact"},{"name":"Pudendalgia","type":"exact"},{"name":"neuralgia of pudendal nerve","type":"exact"},{"name":"pudendal algia","type":"exact"},{"name":"pudendal nerve entrapment syndrome","type":"exact"},{"name":"pudendal nerve neuralgia","type":"exact"},{"name":"pudendal neuralgia by pudendal nerve entrapment","type":"exact"}],"termid":"MONDO:0018957","xrefs":{"Monarch":{"xref_id":"0018957"}}}


id: GO:0140311
data:
  {"annotated_genes":["SJAG_04873","SJAG_00436","SJAG_02266","SJAG_00642","SJAG_02576","SJAG_01993","SJAG_02857","SJAG_00822","SJAG_00145","SJAG_02474"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89464,92058,97045,97108,102399,102451,106941,109371,113701],"is_not":false,"summary":null,"term":"GO:0140311"},{"annotations":[116322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003788"}]},"cv_name":"molecular_function","definition":"Binding to a protein to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:1493333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00436":null,"SJAG_00642":null,"SJAG_00822":null,"SJAG_01993":null,"SJAG_02266":null,"SJAG_02474":null,"SJAG_02576":null,"SJAG_02857":null,"SJAG_04873":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140313"}],"interesting_parent_ids":["GO:0003674","GO:0140313"],"is_obsolete":false,"name":"protein sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140311","terms_by_termid":{"GO:0003788":null,"GO:0140311":null}}


id: GO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfite + 3 1,5-dihydrocoenzyme F420 = hydrogen sulfide + 3 H2O + 3 coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["PMID:16048999","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase (coenzyme F420) activity","synonyms":[{"name":"coenzyme F420-dependent sulfite reductase activity","type":"exact"},{"name":"coenzyme F420-sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:coenzyme F420 oxidoreductase activity","type":"exact"},{"name":"sulfite:reduced coenzyme F420 reductase activity","type":"exact"}],"termid":"GO:0052806"}


id: GO:0035946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading messenger RNA (mRNA) within the mitochondrion.","definition_xrefs":["PMID:19864255","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"},{"relation_name":"is_a","term_name":"mitochondrial RNA surveillance","termid":"GO:2000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial mRNA surveillance","synonyms":[{"name":"mitochondrial aberrant RNA catabolic process","type":"exact"},{"name":"mitochondrial mRNA quality control","type":"exact"},{"name":"mitochondrial messenger RNA surveillance","type":"exact"}],"termid":"GO:0035946"}


id: PBO:0070639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 10","termid":"PBO:0070639"}


id: MONDO:0013003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated aglossia and hypoglossia are terms covering the spectrum from partial to total absence of the tongue. These congenital malformations have been classified as part of the group of oromandibular-limb hypogenesis syndromes (OLHS).","definition_xrefs":["Orphanet:141152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"oromandibular-limb hypogenesis syndrome","termid":"MONDO:0017139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"isolated congenital hypoglossia/aglossia","secondary_identifiers":["UMLS:C2748587","GARD:16972","MEDGEN:411249","OMIM:612776"],"synonyms":[{"name":"hypoglossia with situs inversus","type":"related"},{"name":"hypoglossia, isolated","type":"related"}],"termid":"MONDO:0013003","xrefs":{"Monarch":{"xref_id":"0013003"}}}


id: MONDO:0019464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heavy-chain diseases (HCDs) are rare monoclonal lymphoplasma-cell proliferative disorders involving B cells and are characterized by the synthesis of truncated heavy chains without associated light chains.","definition_xrefs":["Orphanet:86864"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type IV hypersensitivity disease","termid":"MONDO:0002459"},{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"heavy chain disease","secondary_identifiers":["ICDO:9762/3","MESH:D006362","ICD10CM:C88.3","SCTID:68979007","DOID:0060125","UMLS:C0018852","MEDGEN:5469","ICD9:273.2","GARD:19074","ICD10CM:C88.2","NCIT:C3082","EFO:1001341","MedDRA:10019350"],"synonyms":[{"name":"HCD","type":"exact"},{"name":"heavy chain disease","type":"exact"}],"termid":"MONDO:0019464","xrefs":{"Monarch":{"xref_id":"0019464"}}}


id: MONDO:0010842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucocutaneous venous malformations (VMCMs) are hereditary vascular malformations characterized by the presence of small, multifocal, bluish-purple venous lesions involving the skin and mucosa.","definition_xrefs":["Orphanet:2451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"multiple cutaneous and mucosal venous malformations","secondary_identifiers":["UMLS:C1838437","OMIM:600195","SCTID:699301008","GARD:16600","MEDGEN:325026","DOID:0050792","MESH:C563977"],"synonyms":[{"name":"VENOUS malformations, multiple cutaneous and mucosal","type":"related"},{"name":"VMCM","type":"exact"},{"name":"Vmcm1","type":"related"},{"name":"cutaneous and mucosal venous malformation","type":"exact"},{"name":"mucocutaneous venous malformations","type":"related"}],"termid":"MONDO:0010842","xrefs":{"Monarch":{"xref_id":"0010842"}}}


id: GO:1901238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + tungstate(in) = ADP + phosphate + tungstate(out).","definition_xrefs":["RHEA:35027","PMID:21784948","GOC:TermGenie","PMID:16952940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type tungstate transporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-242B","GO:1901237","EC:7.3.2.6"],"synonyms":[{"name":"ATPase-coupled tungstate transmembrane transporter activity","type":"related"},{"name":"tungstate transmembrane transporter activity","type":"broad"},{"name":"tungstate transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:1901238"}


id: PBO:0003898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, DUF1773 family","termid":"PBO:0003898"}


id: PBO:0071212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 53","termid":"PBO:0071212"}


id: GO:1904261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of basement membrane assembly involved in embryonic body morphogenesis.","definition_xrefs":["PMID:23940118","GOC:TermGenie","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix assembly","termid":"GO:1901203"},{"relation_name":"is_a","term_name":"regulation of basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:1904259"},{"relation_name":"positively_regulates","term_name":"basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:2001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of basement membrane assembly involved in embryonic body morphogenesis","synonyms":[{"name":"activation of basement membrane assembly involved in embryonic body morphogenesis","type":"narrow"},{"name":"up regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"up-regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"upregulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"}],"termid":"GO:1904261"}


id: MOD:00534
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Post-translational","definition_xrefs":["PubMed:9448752","Unimod:176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to cysteine and lysine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:00534"}


id: MONDO:0020315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Unclassified myelodysplastic syndrome (MDS-U) is a subtype of myelodysplastic syndrome (MDS) with atypical features of uncertain clinical significance.","definition_xrefs":["Orphanet:98827"],"gene_count":0,"genotype_count":0,"name":"obsolete unclassified myelodysplastic syndrome (obsolete MONDO:0020315)","secondary_identifiers":["icd11.foundation:1684468291"],"termid":"MONDO:0020315","xrefs":{"Monarch":{"xref_id":"0020315"}}}


id: PBO:0054111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1476","termid":"PBO:0054111"}


id: MONDO:1011276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa that occurs in cattle due to a mutation in RP1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa, cattle","termid":"MONDO:1011259"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa, RP1-related, cattle","secondary_identifiers":["OMIA:002029-9913"],"synonyms":[{"name":"retinitis pigmentosa 1, cattle","type":"related"}],"termid":"MONDO:1011276","xrefs":{"Monarch":{"xref_id":"1011276"}}}


id: MONDO:1012946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any skeletal dysplasia that occurs in dogs due to a mutation in the PCYT1A gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, PCYT1A-related, dog","secondary_identifiers":["OMIA:002606-9615"],"synonyms":[{"name":"SD3","type":"exact"},{"name":"disproportionate dwarfism","type":"related"},{"name":"skeletal dysplasia 3, PCYT1A-related, dog","type":"exact"},{"name":"skeletal dysplasia 3, dog","type":"related"}],"termid":"MONDO:1012946","xrefs":{"Monarch":{"xref_id":"1012946"}}}


id: GO:0008657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ATP-hydrolyzing DNA topoisomerase. ATP-hydrolyzing DNA topoisomerase catalyzes the DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ATPase inhibitor activity","termid":"GO:0042030"},{"relation_name":"is_a","term_name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) regulator activity","termid":"GO:0072586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0030234","GO:0004857","GO:0098772"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity","synonyms":[{"name":"DNA gyrase inhibitor activity","type":"exact"}],"termid":"GO:0008657"}


id: GO:0102665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-glutamate + ATP = H+ + indole-3-acetyl-glutamate + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-glutamate synthetase activity (obsolete GO:0102665)","termid":"GO:0102665"}


id: PBO:0063350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pecanex 4","termid":"PBO:0063350"}


id: PBO:0116728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRB antisense RNA 1","termid":"PBO:0116728"}


id: MONDO:0030915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive non-syndromic intellectual disability that has material basis in an autosomal recessive mutation of the RUSC2 gene on chromosome 9p13.","definition_xrefs":["DOID:0080239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 61","secondary_identifiers":["UMLS:C4540424","MEDGEN:1622296","OMIM:617773"],"synonyms":[{"name":"Alwadei syndrome","type":"related"},{"name":"MRT61","type":"related"},{"name":"autosomal recessive intellectual disability 61","type":"related"},{"name":"autosomal recessive mental retardation 61","type":"related"},{"name":"intellectual disability, autosomal recessive 61","type":"exact"},{"name":"mental retardation, autosomal recessive 61","type":"related"}],"termid":"MONDO:0030915","xrefs":{"Monarch":{"xref_id":"0030915"}}}


id: GO:0019441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-tryptophan into other compounds, including kynurenine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"kynurenine metabolic process","termid":"GO:0070189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-tryptophan catabolic process to kynurenine","secondary_identifiers":["MetaCyc:TRPKYNCAT-PWY"],"synonyms":[{"name":"tryptophan breakdown to kynurenine","type":"exact"},{"name":"tryptophan catabolic process to kynurenine","type":"exact"},{"name":"tryptophan degradation to kynurenine","type":"exact"}],"termid":"GO:0019441"}


id: PBO:0039801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis resistant E3 ubiquitin protein ligase 1","termid":"PBO:0039801"}


id: MONDO:0015669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with dentinogenesis imperfecta (obsolete MONDO:0015669)","secondary_identifiers":["Orphanet:167762"],"termid":"MONDO:0015669","xrefs":{"Monarch":{"xref_id":"0015669"}}}


id: PBO:0066884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 184","termid":"PBO:0066884"}


id: PBO:0038589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 8","termid":"PBO:0038589"}


id: PBO:0075949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 4 (pseudogene)","termid":"PBO:0075949"}


id: PBO:0017890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II binding AAA family ATPase Npa3 (predicted)","termid":"PBO:0017890"}


id: PBO:0109317
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome Loss when Overexpressed","termid":"PBO:0109317"}


id: GO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate = 3-phosphonopyruvate.","definition_xrefs":["RHEA:17013","EC:5.4.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate mutase activity","secondary_identifiers":["MetaCyc:PHOSPHOENOLPYRUVATE-MUTASE-RXN","KEGG_REACTION:R00661"],"synonyms":[{"name":"PEP mutase activity","type":"related"},{"name":"PEP phosphomutase activity","type":"related"},{"name":"PEPPM","type":"related"},{"name":"phosphoenolpyruvate 2,3-phosphonomutase activity","type":"related"},{"name":"phosphoenolpyruvate phosphomutase activity","type":"related"},{"name":"phosphoenolpyruvate-phosphonopyruvate phosphomutase activity","type":"related"}],"termid":"GO:0050188"}


id: PBO:0038332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-connecting_branch_of","termid":"PBO:0038332"}


id: PBO:0058834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8064","termid":"PBO:0058834"}


id: PBO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 2","termid":"PBO:0046139"}


id: PBO:0004508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon beta subunit Sbh1 (predicted)","termid":"PBO:0004508"}


id: PBO:0039567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 62 pseudogene 1","termid":"PBO:0039567"}


id: PBO:0068728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 17, pseudogene","termid":"PBO:0068728"}


id: PATO:0000792
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000792 repair function value (obsolete PATO:0000792)","termid":"PATO:0000792"}


id: GO:0005898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-13; consists of two chains, interleukin-13 receptor alpha1 chain and interleukin-4 receptor alpha chain.","definition_xrefs":["PMID:8552669","PMID:9013879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-13 receptor complex","synonyms":[{"name":"IL-13 receptor complex","type":"exact"}],"termid":"GO:0005898"}


id: PBO:0086493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative phosphatidylinositol/phosphatidylcholine transfer protein; possibly involved in lipid metabolism; localizes to the nucleus; contains a CRAL/TRIO domain and binds several lipids in a large-scale study; YKL091C has a paralog, SEC14, that arose from the whole genome duplication","termid":"PBO:0086493"}


id: PBO:0091597
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously incorrectly annotated as pex22","termid":"PBO:0091597"}


id: PBO:0075520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E1","termid":"PBO:0075520"}


id: PBO:0053908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1202","termid":"PBO:0053908"}


id: PBO:0044410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily G member 1, pseudogene","termid":"PBO:0044410"}


id: MONDO:0003438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of small cell lung carcinoma in combination with a non-small cell carcinoma.","definition_xrefs":["NCIT:C9137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined lung carcinoma","termid":"MONDO:0006167"},{"relation_name":"is_a","term_name":"small cell lung carcinoma","termid":"MONDO:0008433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"combined small cell lung carcinoma","secondary_identifiers":["DOID:5421","ICDO:8045/3","ONCOTREE:CSCLC","UMLS:C1333125","MEDGEN:234167"],"synonyms":[{"name":"CSCLC","type":"related"},{"name":"combined small and large cell lung cancer","type":"exact"},{"name":"combined small and large cell lung carcinoma","type":"exact"},{"name":"combined small cell and large cell lung carcinoma","type":"exact"},{"name":"combined small cell carcinoma of lung","type":"exact"},{"name":"combined small cell carcinoma of the lung","type":"exact"},{"name":"combined small cell lung cancer","type":"exact"},{"name":"combined small cell lung carcinoma","type":"exact"},{"name":"combined type small cell carcinoma of lung","type":"exact"},{"name":"combined type small cell carcinoma of the lung","type":"exact"},{"name":"combined type small cell lung carcinoma","type":"exact"},{"name":"lung combined type small cell carcinoma","type":"related"},{"name":"mixed small cell and large cell carcinoma of lung","type":"exact"},{"name":"mixed small cell and large cell carcinoma of the lung","type":"exact"},{"name":"mixed small cell and large cell lung carcinoma","type":"exact"},{"name":"small cell and large cell carcinoma of lung","type":"exact"},{"name":"small cell and large cell carcinoma of the lung","type":"exact"},{"name":"small cell and large cell lung carcinoma","type":"exact"}],"termid":"MONDO:0003438","xrefs":{"Monarch":{"xref_id":"0003438"}}}


id: MONDO:0032752
data:
  {"annotated_genes":["SJAG_02236"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88962],"is_not":false,"summary":null,"term":"MONDO:0032752"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 75","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684253","OMIM:618437","GARD:16352","UMLS:C5193099","DOID:0112211"],"synonyms":[{"name":"DEE75","type":"exact"},{"name":"EIEE75","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 75","type":"exact"},{"name":"developmental and epileptic encephalopathy 75","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 75","type":"exact"}],"termid":"MONDO:0032752","terms_by_termid":{"MONDO:0032752":null},"xrefs":{"Monarch":{"xref_id":"0032752"}}}


id: FYPO:0001833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoglycerate mutase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal phosphoglycerate mutase activity","termid":"FYPO:0001831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased phosphoglycerate mutase activity","termid":"FYPO:0001833"}


id: PBO:0084176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histidinol-phosphate aminotransferase; catalyzes the seventh step in histidine biosynthesis; responsive to general control of amino acid biosynthesis; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts","termid":"PBO:0084176"}


id: SO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 18th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K18_acetylation_site","synonyms":[{"name":"H3K18 acetylation site","type":"exact"},{"name":"H3K18ac","type":"exact"}],"termid":"SO:0001718"}


id: PBO:0042330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD53 molecule","termid":"PBO:0042330"}


id: PBO:0074387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG8 nonsense mediated mRNA decay factor","termid":"PBO:0074387"}


id: PBO:0009980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm4/Cdc21","termid":"PBO:0009980"}


id: GO:0044278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of the cell wall of another organism by a venom, leading to damage or temporary subversion of the cell wall.","definition_xrefs":["PMID:36738900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated disruption of anatomical structure in another organism","termid":"GO:0140138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated disruption of cell wall in another organism","synonyms":[{"name":"cell wall disruption in another organism","type":"broad"},{"name":"cell wall disruption in other organism","type":"broad"}],"termid":"GO:0044278"}


id: GO:0019578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aldaric acid biosynthetic process","synonyms":[{"name":"aldaric acid anabolism","type":"exact"},{"name":"aldaric acid biosynthesis","type":"exact"},{"name":"aldaric acid formation","type":"exact"},{"name":"aldaric acid synthesis","type":"exact"}],"termid":"GO:0019578"}


id: PBO:0005460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichothecene 3-O-acetyltransferase pseudogene","termid":"PBO:0005460"}


id: PBO:0088843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase, Sirtuin family, NAD-dependent Hst2","termid":"PBO:0088843"}


id: MONDO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chromosomal disease (obsolete MONDO:0000838)","termid":"MONDO:0000838","xrefs":{"Monarch":{"xref_id":"0000838"}}}


id: MONDO:0014960
data:
  {"annotated_genes":["SJAG_02462","SJAG_03669"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020781"},{"annotations":[87893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0034121"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02462":null,"SJAG_03669":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:617186","EFO:0009158"],"synonyms":[{"name":"PEBEL","type":"exact"},{"name":"encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy","type":"exact"},{"name":"encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy; PEBEL","type":"exact"},{"name":"encephalopathy, progressive, early-onset, with brain oedema and/or leukoencephalopathy; PEBEL","type":"exact"}],"termid":"MONDO:0014960","terms_by_termid":{"MONDO:0020781":null,"MONDO:0034121":null},"xrefs":{"Monarch":{"xref_id":"0014960"}}}


id: GO:0006162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete purine/pyrimidine nucleoside diphosphate reduction (obsolete GO:0006162)","synonyms":[{"name":"purine/pyrimidine nucleoside diphosphate reduction","type":"exact"}],"termid":"GO:0006162"}


id: PBO:0013798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, nucleoporin Nup37","termid":"PBO:0013798"}


id: GO:0061920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propionyl-CoA + lysine in peptide = CoA + N-propionyl-lysine-peptide.","definition_xrefs":["PMID:17267393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"protein propionyltransferase activity","secondary_identifiers":["RHEA:54020"],"termid":"GO:0061920"}


id: PBO:0084540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; ERP4 has a paralog, ERP2, that arose from the whole genome duplication","termid":"PBO:0084540"}


id: GO:0007535
data:
  {"annotated_genes":["SJAG_01068","SJAG_01495","SJAG_00320","SJAG_03006","SJAG_00293","SJAG_00769","SJAG_01601","SJAG_02319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89759,93090,95250,101016,118212,118541,118854,120875],"is_not":false,"summary":null,"term":"GO:0007535"}]},"cv_name":"biological_process","definition":"The process that determines which donor locus a cell uses, in preference to another, in mating type switching.","definition_xrefs":["PMID:9928492","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_00769":null,"SJAG_01068":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"donor selection","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"donor preference","type":"related"}],"termid":"GO:0007535","terms_by_termid":{"GO:0007535":null}}


id: PBO:0066501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raftlin family member 2","termid":"PBO:0066501"}


id: GO:0000166
data:
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