# genes

id: SJAG_03278
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[92171],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[78335],"is_not":false,"summary":null,"term":"GO:0005797"},{"annotations":[78334],"is_not":false,"summary":null,"term":"GO:0000138"},{"annotations":[78336],"is_not":false,"summary":null,"term":"GO:0016020"}],"mondo":[{"annotations":[88682],"is_not":false,"summary":null,"term":"MONDO:0031028"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08144","EnsemblGenomes-Gn:SJAG_03278","InterPro:IPR026705","UniProtKB/TrEMBL:B6K3T7"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":178,"start":158}},{"range":{"end":671,"start":628}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rec12","uniquename":"SJAG_05295"},{"name":"ucp7","uniquename":"SJAG_05296"},{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"}],"genes_by_uniquename":{"HGNC:15736":null,"SJAG_03278":null,"SPAC17A5.16":null,"YLR436C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"High-temperature-induced dauer-formation protein","id":"PF12722","interpro_description":"Hid-1/Ecm30","interpro_id":"IPR026705","interpro_name":"Hid-1/Ecm30","locations":[{"end":832,"start":1}],"match_end":832,"match_start":1,"name":"Hid1"},{"dbname":"PANTHER","id":"PTHR21575","interpro_description":"Hid-1/Ecm30","interpro_id":"IPR026705","interpro_name":"Hid-1/Ecm30","locations":[{"end":832,"start":1}],"match_end":832,"match_start":1,"name":"PROTEIN HID1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":178,"start":158},{"end":671,"start":628}],"match_end":671,"match_start":158,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":671,"start":660}],"match_end":671,"match_start":660,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":178,"start":165}],"match_end":178,"match_start":165,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":778283,"start_pos":775085,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":104,"start":93}},{"range":{"end":198,"start":185}},{"range":{"end":230,"start":215}},{"range":{"end":323,"start":311}},{"range":{"end":677,"start":659}}],"name":"ftp105","ortholog_annotations":[{"gene_uniquename":"SJAG_03278","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15736","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03278","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A5.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03278","ortholog_taxonid":4932,"ortholog_uniquename":"YLR436C","reference_uniquename":"PMID:29761456"}],"product":"Golgi localized protein, human HID1 ortholog 3, implicated in vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005794","MONDO:0005027","MONDO:0700092","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000138":null,"GO:0005797":null,"GO:0005829":null,"GO:0016020":null,"MONDO:0031028":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03278.1"],"transcripts_by_uniquename":{"SJAG_03278.1":null},"uniprot_identifier":"B6K3T7","uniquename":"SJAG_03278"}


id: SJAG_03279
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91319],"is_not":false,"summary":null,"term":"GO:1905746"},{"annotations":[91320],"is_not":false,"summary":null,"term":"GO:0000387"}],"cellular_component":[{"annotations":[91314],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[91316],"is_not":false,"summary":null,"term":"GO:0034715"},{"annotations":[91317],"is_not":false,"summary":null,"term":"GO:0005681"}]},"dbxrefs":["GOA:B6K3T8","EnsemblGenomes-Gn:SJAG_03279","InterPro:IPR011993","UniProtKB/TrEMBL:B6K3T8","EnsemblGenomes-Tr:EEB08145","InterPro:IPR039924"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":164,"start":142}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ucp7","uniquename":"SJAG_05296"},{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"}],"genes_by_uniquename":{"HGNC:2080":null,"SJAG_03279":null,"SPAC1610.01":null,"YKL183W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Regulator of volume decrease after cellular swelling","id":"PF03517","interpro_description":"Protein ICln/Lot5/Saf5","interpro_id":"IPR039924","interpro_name":"ICln/Lot5/Saf5","locations":[{"end":156,"start":56}],"match_end":156,"match_start":56,"name":"Voldacs"},{"dbname":"GENE3D","id":"G3DSA:2.30.29.30","interpro_description":"PH-like domain superfamily","interpro_id":"IPR011993","interpro_name":"PH-like_dom_sf","locations":[{"end":149,"start":19}],"match_end":149,"match_start":19},{"dbname":"PANTHER","id":"PTHR21399","interpro_description":"Protein ICln/Lot5/Saf5","interpro_id":"IPR039924","interpro_name":"ICln/Lot5/Saf5","locations":[{"end":170,"start":18}],"match_end":170,"match_start":18,"name":"CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":164,"start":142}],"match_end":164,"match_start":142,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":780260,"start_pos":779679,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":122,"start":106}}],"name":"saf5","ortholog_annotations":[{"gene_uniquename":"SJAG_03279","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2080","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03279","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1610.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03279","ortholog_taxonid":4932,"ortholog_uniquename":"YKL183W","reference_uniquename":"PMID:29761456"}],"product":"methylosome pICln ortholog, Saf5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005829","GO:0065003","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000387":null,"GO:0005681":null,"GO:0005829":null,"GO:0034715":null,"GO:1905746":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03279.1"],"transcripts_by_uniquename":{"SJAG_03279.1":null},"uniprot_identifier":"B6K3T8","uniquename":"SJAG_03279"}


id: SJAG_03280
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":931,"start":22}}],"cv_annotations":{"biological_process":[{"annotations":[78538],"is_not":false,"summary":null,"term":"GO:0006491"}],"cellular_component":[{"annotations":[78537],"is_not":false,"summary":null,"term":"GO:0017177"}],"molecular_function":[{"annotations":[66426],"is_not":false,"summary":null,"term":"GO:0030246"},{"annotations":[89203],"is_not":false,"summary":null,"term":"GO:0106407"}],"mondo":[{"annotations":[87299],"is_not":false,"summary":null,"term":"MONDO:0010916"}],"sequence":[{"annotations":[82425],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["GOA:B6K3T9","UniProtKB/TrEMBL:B6K3T9","InterPro:IPR011013","InterPro:IPR025887","EnsemblGenomes-Gn:SJAG_03280","EnsemblGenomes-Tr:EEB08146","InterPro:IPR017853","InterPro:IPR000322","InterPro:IPR013780"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"}],"genes_by_uniquename":{"HGNC:4138":null,"SJAG_03280":null,"SPAC1002.03c":null,"YBR229C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glycosyl hydrolases family 31 TIM-barrel domain","id":"PF01055","interpro_description":"Glycoside hydrolase family 31, TIM barrel domain","interpro_id":"IPR000322","interpro_name":"Glyco_hydro_31_TIM","locations":[{"end":704,"start":377}],"match_end":704,"match_start":377,"name":"Glyco_hydro_31_2nd"},{"dbname":"PFAM","description":"Glycosyl hydrolase family 31 C-terminal domain","id":"PF21365","interpro_description":"Glycosyl hydrolase family 31, C-terminal domain","interpro_id":"IPR048395","interpro_name":"Glyco_hydro_31_C","locations":[{"end":801,"start":712}],"match_end":801,"match_start":712,"name":"Glyco_hydro_31_3rd"},{"dbname":"PFAM","description":"Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain","id":"PF13802","interpro_description":"Glycoside hydrolase family 31, N-terminal domain","interpro_id":"IPR025887","interpro_name":"Glyco_hydro_31_N_dom","locations":[{"end":327,"start":100}],"match_end":327,"match_start":100,"name":"Gal_mutarotas_2"},{"dbname":"CDD","description":"GH31_GANC_GANAB_alpha","id":"cd06603","locations":[{"end":844,"start":375}],"match_end":844,"match_start":375,"name":"GH31_GANC_GANAB_alpha"},{"dbname":"CDD","description":"GH31_N","id":"cd14752","locations":[{"end":373,"start":252}],"match_end":373,"match_start":252,"name":"GH31_N"},{"dbname":"PROSITE_PROFILES","description":"Prokaryotic membrane lipoprotein lipid attachment site profile.","id":"PS51257","locations":[{"end":25,"start":1}],"match_end":25,"match_start":1,"name":"PROKAR_LIPOPROTEIN"},{"dbname":"SUPERFAMILY","id":"SSF51445","interpro_description":"Glycoside hydrolase superfamily","interpro_id":"IPR017853","interpro_name":"Glycoside_hydrolase_SF","locations":[{"end":712,"start":365}],"match_end":712,"match_start":365,"name":"(Trans)glycosidases"},{"dbname":"SUPERFAMILY","id":"SSF74650","interpro_description":"Galactose mutarotase-like domain superfamily","interpro_id":"IPR011013","interpro_name":"Gal_mutarotase_sf_dom","locations":[{"end":361,"start":87}],"match_end":361,"match_start":87,"name":"Galactose mutarotase-like"},{"dbname":"SUPERFAMILY","id":"SSF51011","locations":[{"end":797,"start":714}],"match_end":797,"match_start":714,"name":"Glycosyl hydrolase domain"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.1180","interpro_description":"Glycosyl hydrolase, all-beta","interpro_id":"IPR013780","interpro_name":"Glyco_hydro_b","locations":[{"end":918,"start":697}],"match_end":918,"match_start":697},{"dbname":"GENE3D","id":"G3DSA:2.60.40.1760","locations":[{"end":375,"start":209}],"match_end":375,"match_start":209,"name":"glycosyl hydrolase (family 31)"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.80","locations":[{"end":696,"start":377}],"match_end":696,"match_start":377,"name":"Glycosidases"},{"dbname":"PANTHER","id":"PTHR22762","locations":[{"end":899,"start":18}],"match_end":899,"match_start":18,"name":"ALPHA-GLUCOSIDASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":783633,"start_pos":780838,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":697,"start":686}}],"name":"gls2","ortholog_annotations":[{"gene_uniquename":"SJAG_03280","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4138","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03280","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03280","ortholog_taxonid":4932,"ortholog_uniquename":"YBR229C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03280","ortholog_taxonid":4932,"ortholog_uniquename":"YBR229C","reference_uniquename":"PMID:26896847"}],"product":"glucosidase II alpha subunit Gls2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":21,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030246"],"not-binding":["GO:0106407"]}},"subset_termids":["MONDO:0000426","GO:0005783","GO:0016798","MONDO:0005240"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006491":null,"GO:0017177":null,"GO:0030246":null,"GO:0106407":null,"MONDO:0010916":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03280.1"],"transcripts_by_uniquename":{"SJAG_03280.1":null},"uniprot_identifier":"B6K3T9","uniquename":"SJAG_03280"}


id: SJAG_03281
data:
  {"cv_annotations":{"biological_process":[{"annotations":[89198],"is_not":false,"summary":null,"term":"GO:0006913"}],"cellular_component":[{"annotations":[89196],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[89197],"is_not":false,"summary":null,"term":"GO:1990578"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03281","EnsemblGenomes-Tr:EEB08147","InterPro:IPR012578","UniProtKB/TrEMBL:B6K3U0","GOA:B6K3U0"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":96,"start":68}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"}],"genes_by_uniquename":{"SJAG_03281":null,"SPAC1002.02":null,"YLR018C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nuclear pore complex component","id":"PF08058","interpro_description":"Nuclear pore complex component","interpro_id":"IPR012578","interpro_name":"Nucl_pore_cmplx","locations":[{"end":248,"start":125}],"match_end":248,"match_start":125,"name":"NPCC"},{"dbname":"PANTHER","id":"PTHR28003","interpro_description":"Nuclear pore complex component","interpro_id":"IPR012578","interpro_name":"Nucl_pore_cmplx","locations":[{"end":224,"start":178}],"match_end":224,"match_start":178,"name":"NUCLEOPORIN POM34"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":96,"start":68}],"match_end":96,"match_start":68,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":784666,"start_pos":783914,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":37,"start":20}}],"name":"pom34","ortholog_annotations":[{"gene_uniquename":"SJAG_03281","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03281","ortholog_taxonid":4932,"ortholog_uniquename":"YLR018C","reference_uniquename":"PMID:29761456"}],"product":"nucleoporin Pom34","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005789","GO:0006913","GO:0005643","GO:0005783","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005643":null,"GO:0006913":null,"GO:1990578":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":197,"start":175}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03281.1"],"transcripts_by_uniquename":{"SJAG_03281.1":null},"uniprot_identifier":"B6K3U0","uniquename":"SJAG_03281"}


id: SJAG_03282
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":513,"start":26}}],"coiled_coil_coords":[{"range":{"end":498,"start":478}}],"cv_annotations":{"biological_process":[{"annotations":[91339],"is_not":false,"summary":null,"term":"GO:0042407"}],"cellular_component":[{"annotations":[91336],"is_not":false,"summary":null,"term":"GO:0099617"},{"annotations":[91337],"is_not":false,"summary":null,"term":"GO:0044284"}],"sequence":[{"annotations":[82486],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["GOA:B6K3U1","EnsemblGenomes-Gn:SJAG_03282","UniProtKB/TrEMBL:B6K3U1","EnsemblGenomes-Tr:EEB08148"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"}],"genes_by_uniquename":{"SJAG_03282":null,"SPAC1610.04":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mmc1 N-terminal domain","id":"PF23867","locations":[{"end":156,"start":81}],"match_end":156,"match_start":81,"name":"Mmc1_N"},{"dbname":"PFAM","description":"Mmc1 C-terminal domain","id":"PF23868","interpro_description":"Mmc1, C-terminal domain","interpro_id":"IPR056196","interpro_name":"Mmc1_C","locations":[{"end":464,"start":295}],"match_end":464,"match_start":295,"name":"Mmc1_C"},{"dbname":"COILS","id":"Coil","locations":[{"end":498,"start":478}],"match_end":498,"match_start":478,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":787165,"start_pos":785624,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":286,"start":275}}],"name":"mmc1","ortholog_annotations":[{"gene_uniquename":"SJAG_03282","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1610.04","reference_uniquename":"PMID:21511999"}],"product":"mitochondrial MICOS interactor required for cristae morphology Mmc1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":25,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"subset_termids":["GO:0005739","GO:0007005","GO:0061024"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0042407":null,"GO:0044284":null,"GO:0099617":null,"SO:0000418":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":445,"start":423}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03282.1"],"transcripts_by_uniquename":{"SJAG_03282.1":null},"uniprot_identifier":"B6K3U1","uniquename":"SJAG_03282"}


id: SJAG_03283
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91329],"is_not":false,"summary":null,"term":"GO:0006406"},{"annotations":[91330],"is_not":false,"summary":null,"term":"GO:0048255"}],"cellular_component":[{"annotations":[91326],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[91327],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[73474],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[91332],"is_not":false,"summary":null,"term":"GO:0003730"},{"annotations":[91333],"is_not":false,"summary":null,"term":"GO:0008143"},{"annotations":[91334],"is_not":false,"summary":null,"term":"GO:0008266"}]},"dbxrefs":["InterPro:IPR035979","InterPro:IPR012677","GOA:B6K3U2","EnsemblGenomes-Gn:SJAG_03283","InterPro:IPR000504","UniProtKB/TrEMBL:B6K3U2","EnsemblGenomes-Tr:EEB08149"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":189,"start":167}},{"range":{"end":580,"start":544}},{"range":{"end":688,"start":656}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"}],"genes_by_uniquename":{"SJAG_03283":null,"SPAC1610.03c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":101,"start":20},{"end":275,"start":211},{"end":423,"start":352}],"match_end":423,"match_start":20,"name":"RRM_1"},{"dbname":"CDD","description":"RRM2_Crp79_Mug28","id":"cd21621","locations":[{"end":282,"start":209}],"match_end":282,"match_start":209,"name":"RRM2_Crp79_Mug28"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":104,"start":18},{"end":284,"start":207},{"end":430,"start":350}],"match_end":430,"match_start":18,"name":"RRM"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":104,"start":19},{"end":280,"start":208},{"end":426,"start":351}],"match_end":426,"match_start":19,"name":"rrm1_1"},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":109,"start":8},{"end":286,"start":197},{"end":439,"start":337}],"match_end":439,"match_start":8,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":112,"start":6},{"end":288,"start":200},{"end":438,"start":319}],"match_end":438,"match_start":6},{"dbname":"PANTHER","id":"PTHR48025","interpro_description":"Eukaryotic RNA-binding","interpro_id":"IPR050502","interpro_name":"Euk_RNA-bind_prot","locations":[{"end":105,"start":10}],"match_end":105,"match_start":10,"name":"OS02G0815200 PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":189,"start":167},{"end":580,"start":544},{"end":688,"start":656}],"match_end":688,"match_start":167,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":189,"start":175},{"end":553,"start":544},{"end":580,"start":568},{"end":688,"start":667}],"match_end":688,"match_start":175,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":567,"start":558}],"match_end":567,"match_start":558,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":790061,"start_pos":787774,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":478,"start":463}},{"range":{"end":615,"start":605}}],"name":"crp79","ortholog_annotations":[{"gene_uniquename":"SJAG_03283","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1610.03c","reference_uniquename":"PMID:21511999"}],"product":"poly(A) binding protein Crp79","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003730","GO:0008143","GO:0008266"]}},"subset_termids":["GO:0005634","GO:0016071","GO:0006913","GO:0005829","GO:0010494"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003730":null,"GO:0005634":null,"GO:0005829":null,"GO:0006406":null,"GO:0008143":null,"GO:0008266":null,"GO:0010494":null,"GO:0048255":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03283.1"],"transcripts_by_uniquename":{"SJAG_03283.1":null},"uniprot_identifier":"B6K3U2","uniquename":"SJAG_03283"}


id: SJAG_03284
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91322],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[74838],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[61305],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[74839],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03284","InterPro:IPR016095","InterPro:IPR023674","UniProtKB/TrEMBL:B6K3U3","InterPro:IPR002143","GOA:B6K3U3","InterPro:IPR028364","EnsemblGenomes-Tr:EEB08150"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"}],"genes_by_uniquename":{"HGNC:14275":null,"SJAG_03284":null,"SPAC1610.02c":null,"YDR116C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L1p/L10e family","id":"PF00687","interpro_description":"Ribosomal protein uL1/ribosomal biogenesis protein","interpro_id":"IPR028364","interpro_name":"Ribosomal_uL1/biogenesis","locations":[{"end":232,"start":55}],"match_end":232,"match_start":55,"name":"Ribosomal_L1"},{"dbname":"CDD","description":"Ribosomal_L1","id":"cd00403","interpro_description":"Ribosomal protein uL1/ribosomal biogenesis protein","interpro_id":"IPR028364","interpro_name":"Ribosomal_uL1/biogenesis","locations":[{"end":237,"start":39}],"match_end":237,"match_start":39,"name":"Ribosomal_L1"},{"dbname":"FUNFAM","description":"50S ribosomal protein L1","id":"G3DSA:3.40.50.790:FF:000001","locations":[{"end":172,"start":81}],"match_end":172,"match_start":81},{"dbname":"SUPERFAMILY","id":"SSF56808","interpro_description":"Ribosomal protein uL1-like","interpro_id":"IPR023674","interpro_name":"Ribosomal_uL1-like","locations":[{"end":237,"start":31}],"match_end":237,"match_start":31,"name":"Ribosomal protein L1"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.790","interpro_description":"Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain","interpro_id":"IPR016095","interpro_name":"Ribosomal_uL1_3-a/b-sand","locations":[{"end":171,"start":81}],"match_end":171,"match_start":81},{"dbname":"GENE3D","id":"G3DSA:3.30.190.20","locations":[{"end":80,"start":39},{"end":236,"start":172}],"match_end":236,"match_start":39},{"dbname":"PANTHER","id":"PTHR36427","locations":[{"end":237,"start":28}],"match_end":237,"match_start":28,"name":"54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL"},{"dbname":"PIRSF","id":"PIRSF002155","interpro_description":"Large ribosomal subunit protein uL1","interpro_id":"IPR002143","interpro_name":"Ribosomal_uL1","locations":[{"end":238,"start":21}],"match_end":238,"match_start":21,"name":"RPL1p_RPL1a_RPL10e_RPL1o"}],"location":{"chromosome_name":"supercont5.2","end_pos":791131,"start_pos":790409,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":104,"start":91}}],"name":"mrpl1","ortholog_annotations":[{"gene_uniquename":"SJAG_03284","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14275","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03284","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1610.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03284","ortholog_taxonid":4932,"ortholog_uniquename":"YDR116C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03284","ortholog_taxonid":4932,"ortholog_uniquename":"YDR116C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial ribosomal protein subunit L1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0003735"]}},"subset_termids":["GO:0140053","GO:0005739","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0003735":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03284.1"],"transcripts_by_uniquename":{"SJAG_03284.1":null},"uniprot_identifier":"B6K3U3","uniquename":"SJAG_03284"}


id: SJAG_03285
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75426],"is_not":false,"summary":null,"term":"GO:0051123"}],"cellular_component":[{"annotations":[89204],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[89205],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[75424],"is_not":false,"summary":null,"term":"GO:0005669"}],"molecular_function":[{"annotations":[75425],"is_not":false,"summary":null,"term":"GO:0016251"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08151","UniProtKB/TrEMBL:B6K3U4","InterPro:IPR006809","EnsemblGenomes-Gn:SJAG_03285","InterPro:IPR009072","GOA:B6K3U4"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":74,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"}],"genes_by_uniquename":{"HGNC:11544":null,"SJAG_03285":null,"SPAC1002.04c":null,"YML015C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"hTAFII28-like protein conserved region","id":"PF04719","interpro_description":"TAFII28-like protein domain","interpro_id":"IPR006809","interpro_name":"TAFII28_dom","locations":[{"end":183,"start":99}],"match_end":183,"match_start":99,"name":"TAFII28"},{"dbname":"CDD","description":"HFD_TAF11","id":"cd08048","interpro_description":"TAFII28-like protein domain","interpro_id":"IPR006809","interpro_name":"TAFII28_dom","locations":[{"end":188,"start":103}],"match_end":188,"match_start":103,"name":"HFD_TAF11"},{"dbname":"FUNFAM","description":"TFIID subunit","id":"G3DSA:1.10.20.10:FF:000061","locations":[{"end":191,"start":103}],"match_end":191,"match_start":103},{"dbname":"SUPERFAMILY","id":"SSF47113","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":187,"start":103}],"match_end":187,"match_start":103,"name":"Histone-fold"},{"dbname":"GENE3D","id":"G3DSA:1.10.20.10","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":191,"start":103}],"match_end":191,"match_start":103,"name":"Histone, subunit A"},{"dbname":"PANTHER","id":"PTHR13218","interpro_description":"Transcription initiation factor TFIID subunit 11-like","interpro_id":"IPR045127","interpro_name":"TAF11-like","locations":[{"end":201,"start":38}],"match_end":201,"match_start":38,"name":"TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":74,"start":1}],"match_end":74,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":49,"start":8}],"match_end":49,"match_start":8,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":791938,"start_pos":791330,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":65,"start":53}},{"range":{"end":128,"start":116}}],"name":"taf11","ortholog_annotations":[{"gene_uniquename":"SJAG_03285","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11544","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03285","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03285","ortholog_taxonid":4932,"ortholog_uniquename":"YML015C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03285","ortholog_taxonid":4932,"ortholog_uniquename":"YML015C","reference_uniquename":"PMID:26896847"}],"product":"transcription factor TFIID complex subunit Taf11","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016251"]}},"subset_termids":["GO:0065003","GO:0005654","GO:0006351","GO:0140223","GO:0005694","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0005669":null,"GO:0005829":null,"GO:0016251":null,"GO:0051123":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03285.1"],"transcripts_by_uniquename":{"SJAG_03285.1":null},"uniprot_identifier":"B6K3U4","uniquename":"SJAG_03285"}


id: SJAG_03286
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71881],"is_not":false,"summary":null,"term":"GO:0006338"},{"annotations":[71882],"is_not":false,"summary":null,"term":"GO:0006355"}],"cellular_component":[{"annotations":[71878],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[71879],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[57463],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[89216],"is_not":false,"summary":null,"term":"GO:0051864"},{"annotations":[71880],"is_not":false,"summary":null,"term":"GO:0034647"},{"annotations":[89219],"is_not":false,"summary":null,"term":"GO:0008270"}],"mondo":[{"annotations":[88176],"is_not":false,"summary":null,"term":"MONDO:0020850"},{"annotations":[87822],"is_not":false,"summary":null,"term":"MONDO:0010767"},{"annotations":[88890],"is_not":false,"summary":null,"term":"MONDO:0010355"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03286","GOA:B6K3U5","InterPro:IPR004198","InterPro:IPR003349","EnsemblGenomes-Tr:EEB08152","InterPro:IPR001606","InterPro:IPR003347","InterPro:IPR036431","UniProtKB/TrEMBL:B6K3U5"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":23,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"}],"genes_by_uniquename":{"HGNC:11114":null,"HGNC:11115":null,"HGNC:18039":null,"HGNC:9886":null,"SJAG_03286":null,"SPAC1002.05c":null,"YJR119C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"JmjC domain, hydroxylase","id":"PF02373","interpro_description":"JmjC domain","interpro_id":"IPR003347","interpro_name":"JmjC_dom","locations":[{"end":485,"start":369}],"match_end":485,"match_start":369,"name":"JmjC"},{"dbname":"PFAM","description":"jmjN domain","id":"PF02375","interpro_description":"JmjN domain","interpro_id":"IPR003349","interpro_name":"JmjN","locations":[{"end":64,"start":31}],"match_end":64,"match_start":31,"name":"JmjN"},{"dbname":"PFAM","description":"C5HC2 zinc finger","id":"PF02928","interpro_description":"Zinc finger, C5HC2-type","interpro_id":"IPR004198","interpro_name":"Znf_C5HC2","locations":[{"end":616,"start":572}],"match_end":616,"match_start":572,"name":"zf-C5HC2"},{"dbname":"PFAM","description":"ARID/BRIGHT DNA binding domain","id":"PF01388","interpro_description":"ARID DNA-binding domain","interpro_id":"IPR001606","interpro_name":"ARID_dom","locations":[{"end":183,"start":100}],"match_end":183,"match_start":100,"name":"ARID"},{"dbname":"PROSITE_PROFILES","description":"JmjN domain profile.","id":"PS51183","interpro_description":"JmjN domain","interpro_id":"IPR003349","interpro_name":"JmjN","locations":[{"end":71,"start":30}],"match_end":71,"match_start":30,"name":"JMJN"},{"dbname":"PROSITE_PROFILES","description":"ARID domain profile.","id":"PS51011","interpro_description":"ARID DNA-binding domain","interpro_id":"IPR001606","interpro_name":"ARID_dom","locations":[{"end":187,"start":95}],"match_end":187,"match_start":95,"name":"ARID"},{"dbname":"PROSITE_PROFILES","description":"JmjC domain profile.","id":"PS51184","interpro_description":"JmjC domain","interpro_id":"IPR003347","interpro_name":"JmjC_dom","locations":[{"end":502,"start":336}],"match_end":502,"match_start":336,"name":"JMJC"},{"dbname":"SMART","id":"SM00558","interpro_description":"JmjC domain","interpro_id":"IPR003347","interpro_name":"JmjC_dom","locations":[{"end":502,"start":336}],"match_end":502,"match_start":336,"name":"cupin_9"},{"dbname":"SMART","id":"SM00501","interpro_description":"ARID DNA-binding domain","interpro_id":"IPR001606","interpro_name":"ARID_dom","locations":[{"end":188,"start":96}],"match_end":188,"match_start":96,"name":"bright_3"},{"dbname":"SMART","id":"SM00545","interpro_description":"JmjN domain","interpro_id":"IPR003349","interpro_name":"JmjN","locations":[{"end":70,"start":29}],"match_end":70,"match_start":29,"name":"JmjN_1"},{"dbname":"SUPERFAMILY","id":"SSF46774","interpro_description":"ARID DNA-binding domain superfamily","interpro_id":"IPR036431","interpro_name":"ARID_dom_sf","locations":[{"end":193,"start":76}],"match_end":193,"match_start":76,"name":"ARID-like"},{"dbname":"SUPERFAMILY","id":"SSF51197","locations":[{"end":525,"start":325}],"match_end":525,"match_start":325,"name":"Clavaminate synthase-like"},{"dbname":"GENE3D","id":"G3DSA:2.60.120.650","locations":[{"end":96,"start":15},{"end":486,"start":255}],"match_end":486,"match_start":15,"name":"Cupin"},{"dbname":"GENE3D","id":"G3DSA:1.10.150.60","interpro_description":"ARID DNA-binding domain superfamily","interpro_id":"IPR036431","interpro_name":"ARID_dom_sf","locations":[{"end":191,"start":97}],"match_end":191,"match_start":97},{"dbname":"PANTHER","id":"PTHR10694","locations":[{"end":615,"start":26}],"match_end":615,"match_start":26,"name":"LYSINE-SPECIFIC DEMETHYLASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":23,"start":1}],"match_end":23,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":794032,"start_pos":792134,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":278,"start":269}},{"range":{"end":420,"start":409}}],"name":"jmj2","ortholog_annotations":[{"gene_uniquename":"SJAG_03286","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11114","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03286","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11115","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03286","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18039","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03286","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9886","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03286","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03286","ortholog_taxonid":4932,"ortholog_uniquename":"YJR119C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03286","ortholog_taxonid":4932,"ortholog_uniquename":"YJR119C","reference_uniquename":"PMID:26896847"}],"product":"histone demethylase Jmj2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677","GO:0008270"],"not-binding":["GO:0034647","GO:0051864"]}},"subset_termids":["GO:0140096","GO:0032452","GO:0006351","MONDO:0037792","MONDO:0002320","MONDO:0005066","GO:0006325","GO:0016491","MONDO:0006025","GO:0005694","GO:0006355","MONDO:0005047","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003677":null,"GO:0005634":null,"GO:0006338":null,"GO:0006355":null,"GO:0008270":null,"GO:0034647":null,"GO:0051864":null,"MONDO:0010355":null,"MONDO:0010767":null,"MONDO:0020850":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03286.1"],"transcripts_by_uniquename":{"SJAG_03286.1":null},"uniprot_identifier":"B6K3U5","uniquename":"SJAG_03286"}


id: SJAG_03287
data:
  {"cv_annotations":{"biological_process":[{"annotations":[89224],"is_not":false,"summary":null,"term":"GO:0032121"}],"cellular_component":[{"annotations":[89220],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[89221],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[89222],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[89223],"is_not":false,"summary":null,"term":"GO:0110092"}],"molecular_function":[{"annotations":[121582],"is_not":false,"summary":null,"term":"GO:0005515"},{"annotations":[89227],"is_not":false,"summary":null,"term":"GO:0030674"}]},"dbxrefs":["GOA:B6K3U6","EnsemblGenomes-Gn:SJAG_03287","UniProtKB/TrEMBL:B6K3U6","EnsemblGenomes-Tr:EEB08153"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:23337086","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"}],"genes_by_uniquename":{"SJAG_03287":null,"SJAG_05260":null,"SPAC1002.06c":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.2","end_pos":794815,"start_pos":794323,"strand":"reverse"},"name":"bqt2","ortholog_annotations":[{"gene_uniquename":"SJAG_03287","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.06c","reference_uniquename":"PMID:21511999"}],"physical_interactions":[{"annotation_date":"2021-05-11","evidence":"Co-purification","gene_uniquename":"SJAG_03287","interactor_uniquename":"SJAG_05260","reference_uniquename":"PMID:23337086","source_database":"JaponicusDB","throughput":"low"}],"product":"bouquet formation protein Bqt2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:23337086":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005515"],"not-binding":["GO:0030674"]}},"subset_termids":["GO:0140013","GO:0015630","GO:0005694","GO:0005634","GO:0060090","GO:0005816"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005515":null,"GO:0030674":null,"GO:0032121":null,"GO:0035974":null,"GO:0044732":null,"GO:0110092":null,"GO:0140445":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03287.1"],"transcripts_by_uniquename":{"SJAG_03287.1":null},"uniprot_identifier":"B6K3U6","uniquename":"SJAG_03287"}


id: SJAG_03288
data:
  {"coiled_coil_coords":[{"range":{"end":47,"start":27}}],"cv_annotations":{"biological_process":[{"annotations":[89230],"is_not":false,"summary":null,"term":"GO:0070458"},{"annotations":[89231],"is_not":false,"summary":null,"term":"GO:0009447"}],"cellular_component":[{"annotations":[89228],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[89229],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[89232],"is_not":false,"summary":null,"term":"GO:0004145"}]},"dbxrefs":["GOA:B6K3U7","InterPro:IPR016181","EnsemblGenomes-Gn:SJAG_03288","InterPro:IPR000182","EnsemblGenomes-Tr:EEB08154","UniProtKB/TrEMBL:B6K3U7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"}],"genes_by_uniquename":{"HGNC:10540":null,"HGNC:23160":null,"HGNC:27992":null,"SJAG_03288":null,"SPAC1002.07c":null,"YEL066W":null,"YPR193C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Acetyltransferase (GNAT) family","id":"PF00583","interpro_description":"GNAT domain","interpro_id":"IPR000182","interpro_name":"GNAT_dom","locations":[{"end":143,"start":54}],"match_end":143,"match_start":54,"name":"Acetyltransf_1"},{"dbname":"CDD","description":"NAT_SF","id":"cd04301","locations":[{"end":124,"start":61}],"match_end":124,"match_start":61,"name":"NAT_SF"},{"dbname":"PROSITE_PROFILES","description":"Gcn5-related N-acetyltransferase (GNAT) domain profile.","id":"PS51186","interpro_description":"GNAT domain","interpro_id":"IPR000182","interpro_name":"GNAT_dom","locations":[{"end":158,"start":7}],"match_end":158,"match_start":7,"name":"GNAT"},{"dbname":"FUNFAM","description":"GNAT family acetyltransferase","id":"G3DSA:3.40.630.30:FF:000064","locations":[{"end":167,"start":5}],"match_end":167,"match_start":5},{"dbname":"SUPERFAMILY","id":"SSF55729","interpro_description":"Acyl-CoA N-acyltransferase","interpro_id":"IPR016181","interpro_name":"Acyl_CoA_acyltransferase","locations":[{"end":158,"start":9}],"match_end":158,"match_start":9,"name":"Acyl-CoA N-acyltransferases (Nat)"},{"dbname":"GENE3D","id":"G3DSA:3.40.630.30","locations":[{"end":168,"start":5}],"match_end":168,"match_start":5},{"dbname":"PANTHER","id":"PTHR10545","interpro_description":"Diverse Substrate Acetyltransferase","interpro_id":"IPR051016","interpro_name":"Diverse_Substrate_AcTransf","locations":[{"end":165,"start":7}],"match_end":165,"match_start":7,"name":"DIAMINE N-ACETYLTRANSFERASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":47,"start":27}],"match_end":47,"match_start":27,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":795973,"start_pos":795069,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_03288","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10540","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03288","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23160","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03288","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:27992","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03288","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03288","ortholog_taxonid":4932,"ortholog_uniquename":"YEL066W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03288","ortholog_taxonid":4932,"ortholog_uniquename":"YPR193C","reference_uniquename":"PMID:29761456"}],"product":"D-amino acid N-acetyltransferase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004145"]}},"subset_termids":["GO:0016746","GO:0005829","GO:0005634","GO:0098754"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004145":null,"GO:0005634":null,"GO:0005829":null,"GO:0009447":null,"GO:0070458":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03288.1"],"transcripts_by_uniquename":{"SJAG_03288.1":null},"uniprot_identifier":"B6K3U7","uniquename":"SJAG_03288"}


id: SJAG_03289
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"S-adenosyl-L-methionine","range":{"end":41,"start":41}},{"assigned_by":"UniProtKB","ligand":"S-adenosyl-L-methionine","range":{"end":94,"start":94}},{"assigned_by":"UniProtKB","ligand":"S-adenosyl-L-methionine","range":{"end":120,"start":120}}],"cv_annotations":{"biological_process":[{"annotations":[89239],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[59889],"is_not":false,"summary":null,"term":"GO:0031167"},{"annotations":[89240],"is_not":false,"summary":null,"term":"GO:0006391"}],"cellular_component":[{"annotations":[89233],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[89234],"is_not":false,"summary":null,"term":"GO:0034245"},{"annotations":[89235],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[89237],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[89241],"is_not":false,"summary":null,"term":"GO:0034246"},{"annotations":[59890],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[59891],"is_not":false,"summary":null,"term":"GO:0000179"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03289","InterPro:IPR029063","EnsemblGenomes-Tr:EEB08155","InterPro:IPR001737","UniProtKB/TrEMBL:B6K3U8","InterPro:IPR023165","GOA:B6K3U8"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"}],"genes_by_uniquename":{"HGNC:17037":null,"HGNC:18559":null,"SJAG_03289":null,"SPAC1002.08c":null,"YMR228W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal RNA adenine dimethylase","id":"PF00398","interpro_description":"Ribosomal RNA adenine methyltransferase KsgA/Erm","interpro_id":"IPR001737","interpro_name":"KsgA/Erm","locations":[{"end":348,"start":34}],"match_end":348,"match_start":34,"name":"RrnaAD"},{"dbname":"PROSITE_PROFILES","description":"rRNA adenine N(6)-methyltransferase family profile.","id":"PS51689","interpro_description":"Ribosomal RNA adenine methyltransferase KsgA/Erm","interpro_id":"IPR001737","interpro_name":"KsgA/Erm","locations":[{"end":352,"start":32}],"match_end":352,"match_start":32,"name":"SAM_RNA_A_N6_MT"},{"dbname":"SUPERFAMILY","id":"SSF53335","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":354,"start":40}],"match_end":354,"match_start":40,"name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"GENE3D","id":"G3DSA:1.10.8.100","interpro_description":"rRNA adenine dimethylase-like, C-terminal","interpro_id":"IPR023165","interpro_name":"rRNA_Ade_diMease-like_C","locations":[{"end":355,"start":281}],"match_end":355,"match_start":281},{"dbname":"GENE3D","id":"G3DSA:3.40.50.150","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":277,"start":12}],"match_end":277,"match_start":12,"name":"Vaccinia Virus protein VP39"},{"dbname":"PANTHER","id":"PTHR11727","interpro_description":"Ribosomal RNA adenine methyltransferase KsgA/Erm","interpro_id":"IPR001737","interpro_name":"KsgA/Erm","locations":[{"end":354,"start":17}],"match_end":354,"match_start":17,"name":"DIMETHYLADENOSINE TRANSFERASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":797985,"start_pos":796885,"strand":"reverse"},"name":"mtf1","ortholog_annotations":[{"gene_uniquename":"SJAG_03289","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17037","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03289","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18559","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03289","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03289","ortholog_taxonid":4932,"ortholog_uniquename":"YMR228W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03289","ortholog_taxonid":4932,"ortholog_uniquename":"YMR228W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial RNA polymerase specificity factor, predicted rRNA methyltransferase Mtf1","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0034246","GO:0000179"]}},"subset_termids":["GO:0016741","GO:0140053","GO:0006351","GO:0005694","GO:0042254","GO:0140098","GO:0005634","GO:0006355","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000179":null,"GO:0000785":null,"GO:0003723":null,"GO:0005634":null,"GO:0005759":null,"GO:0006391":null,"GO:0031167":null,"GO:0034245":null,"GO:0034246":null,"GO:0045944":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03289.1"],"transcripts_by_uniquename":{"SJAG_03289.1":null},"uniprot_identifier":"B6K3U8","uniquename":"SJAG_03289"}


id: SJAG_03290
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":488,"start":488}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"FAD","range":{"end":93,"start":93}},{"assigned_by":"UniProtKB","ligand":"FAD","range":{"end":157,"start":157}},{"assigned_by":"UniProtKB","ligand":"FAD","range":{"end":188,"start":186}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":230,"start":223}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":246,"start":246}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":315,"start":315}},{"assigned_by":"UniProtKB","ligand":"FAD","range":{"end":356,"start":356}},{"assigned_by":"UniProtKB","ligand":"FAD","range":{"end":365,"start":362}}],"cv_annotations":{"PSI-MOD":[{"annotations":[82500],"is_not":false,"summary":null,"term":"MOD:00689"}],"biological_process":[{"annotations":[89248],"is_not":false,"summary":null,"term":"GO:0009060"},{"annotations":[89249],"is_not":false,"summary":null,"term":"GO:0006086"}],"cellular_component":[{"annotations":[89243],"is_not":false,"summary":null,"term":"GO:0005960"},{"annotations":[59597],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[73526],"is_not":false,"summary":null,"term":"GO:0045252"},{"annotations":[89247],"is_not":false,"summary":null,"term":"GO:0045254"}],"molecular_function":[{"annotations":[73524],"is_not":false,"summary":null,"term":"GO:0004148"},{"annotations":[73527],"is_not":false,"summary":null,"term":"GO:0050660"}],"mondo":[{"annotations":[87049],"is_not":false,"summary":null,"term":"MONDO:0009529"}]},"dbxrefs":["InterPro:IPR004099","InterPro:IPR036188","GOA:B6K3U9","InterPro:IPR023753","EnsemblGenomes-Gn:SJAG_03290","InterPro:IPR006258","InterPro:IPR012999","EnsemblGenomes-Tr:EEB08156","UniProtKB/TrEMBL:B6K3U9","InterPro:IPR001100","InterPro:IPR016156"],"deletion_viability":"unknown","disulfide_bonds":[{"assigned_by":"UniProtKB","evidence":"ECO:0000256","range":{"end":89,"start":84}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"}],"genes_by_uniquename":{"HGNC:2898":null,"SJAG_03290":null,"SPAC1002.09c":null,"YFL018C":null,"YPL017C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain","id":"PF02852","interpro_description":"Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain","interpro_id":"IPR004099","interpro_name":"Pyr_nucl-diS_OxRdtase_dimer","locations":[{"end":497,"start":390}],"match_end":497,"match_start":390,"name":"Pyr_redox_dim"},{"dbname":"PFAM","description":"Pyridine nucleotide-disulphide oxidoreductase","id":"PF07992","interpro_description":"FAD/NAD(P)-binding domain","interpro_id":"IPR023753","interpro_name":"FAD/NAD-binding_dom","locations":[{"end":371,"start":46}],"match_end":371,"match_start":46,"name":"Pyr_redox_2"},{"dbname":"PROSITE_PATTERNS","description":"Pyridine nucleotide-disulphide oxidoreductases class-I active site.","id":"PS00076","interpro_description":"Pyridine nucleotide-disulphide oxidoreductase, class I, active site","interpro_id":"IPR012999","interpro_name":"Pyr_OxRdtase_I_AS","locations":[{"end":91,"start":81}],"match_end":91,"match_start":81,"name":"PYRIDINE_REDOX_1"},{"dbname":"PRINTS","description":"Pyridine nucleotide disulphide reductase class-I signature","id":"PR00411","locations":[{"end":69,"start":47},{"end":95,"start":80},{"end":191,"start":182},{"end":243,"start":218},{"end":322,"start":308},{"end":358,"start":351},{"end":407,"start":386},{"end":466,"start":451},{"end":493,"start":473}],"match_end":493,"match_start":47,"name":"PNDRDTASEI"},{"dbname":"PRINTS","description":"FAD-dependent pyridine nucleotide reductase signature","id":"PR00368","locations":[{"end":67,"start":48},{"end":197,"start":179},{"end":236,"start":218},{"end":323,"start":307},{"end":358,"start":336}],"match_end":358,"match_start":48,"name":"FADPNR"},{"dbname":"FUNFAM","description":"Dihydrolipoyl dehydrogenase, mitochondrial","id":"G3DSA:3.50.50.60:FF:000001","locations":[{"end":204,"start":46}],"match_end":204,"match_start":46},{"dbname":"FUNFAM","description":"Dihydrolipoyl dehydrogenase","id":"G3DSA:3.30.390.30:FF:000001","locations":[{"end":510,"start":389}],"match_end":510,"match_start":389},{"dbname":"SUPERFAMILY","id":"SSF51905","interpro_description":"FAD/NAD(P)-binding domain superfamily","interpro_id":"IPR036188","interpro_name":"FAD/NAD-bd_sf","locations":[{"end":413,"start":41}],"match_end":413,"match_start":41,"name":"FAD/NAD(P)-binding domain"},{"dbname":"SUPERFAMILY","id":"SSF55424","interpro_description":"FAD/NAD-linked reductase, dimerisation domain superfamily","interpro_id":"IPR016156","interpro_name":"FAD/NAD-linked_Rdtase_dimer_sf","locations":[{"end":502,"start":386}],"match_end":502,"match_start":386,"name":"FAD/NAD-linked reductases, dimerisation (C-terminal) domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.390.30","interpro_description":"FAD/NAD-linked reductase, dimerisation domain superfamily","interpro_id":"IPR016156","interpro_name":"FAD/NAD-linked_Rdtase_dimer_sf","locations":[{"end":502,"start":383}],"match_end":502,"match_start":383},{"dbname":"GENE3D","id":"G3DSA:3.50.50.60","interpro_description":"FAD/NAD(P)-binding domain superfamily","interpro_id":"IPR036188","interpro_name":"FAD/NAD-bd_sf","locations":[{"end":372,"start":47}],"match_end":372,"match_start":47},{"dbname":"PANTHER","id":"PTHR22912","interpro_description":"Class-I pyridine nucleotide-disulfide oxidoreductase","interpro_id":"IPR050151","interpro_name":"Class-I_Pyr_Nuc-Dis_Oxidored","locations":[{"end":501,"start":43}],"match_end":501,"match_start":43,"name":"DISULFIDE OXIDOREDUCTASE"},{"dbname":"PIRSF","id":"PIRSF000350","interpro_description":"Pyridine nucleotide-disulphide oxidoreductase, class I","interpro_id":"IPR001100","interpro_name":"Pyr_nuc-diS_OxRdtase","locations":[{"end":502,"start":18}],"match_end":502,"match_start":18,"name":"Hg-II_reductase_MerA"},{"dbname":"NCBIFAM","description":"dihydrolipoyl dehydrogenase","id":"TIGR01350","interpro_description":"Dihydrolipoamide dehydrogenase","interpro_id":"IPR006258","interpro_name":"Lipoamide_DH","locations":[{"end":509,"start":46}],"match_end":509,"match_start":46,"name":"lipoamide_DH"}],"location":{"chromosome_name":"supercont5.2","end_pos":799873,"start_pos":798341,"strand":"reverse"},"name":"dld1","ortholog_annotations":[{"gene_uniquename":"SJAG_03290","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2898","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03290","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03290","ortholog_taxonid":4932,"ortholog_uniquename":"YFL018C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03290","ortholog_taxonid":4932,"ortholog_uniquename":"YPL017C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial dihydrolipoamide dehydrogenase (e3 component of oxoglutarate dehydrogenase complex) Dld1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0050660"],"not-binding":["GO:0004148"]}},"subset_termids":["GO:0016491","GO:0006790","GO:0055086","GO:0005739","MONDO:0004736","MONDO:0002525","GO:0006091","MONDO:0004069","MONDO:0037792","MONDO:0005244","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004148":null,"GO:0005759":null,"GO:0005960":null,"GO:0006086":null,"GO:0009060":null,"GO:0045252":null,"GO:0045254":null,"GO:0050660":null,"MOD:00689":null,"MONDO:0009529":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03290.1"],"transcripts_by_uniquename":{"SJAG_03290.1":null},"uniprot_identifier":"B6K3U9","uniquename":"SJAG_03290"}


id: SJAG_03291
data:
  {"coiled_coil_coords":[{"range":{"end":339,"start":319}},{"range":{"end":527,"start":507}}],"cv_annotations":{"biological_process":[{"annotations":[89254],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[89252],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[74049],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[89255],"is_not":false,"summary":null,"term":"GO:0070990"}]},"dbxrefs":["GOA:B6K3V0","InterPro:IPR010770","EnsemblGenomes-Gn:SJAG_03291","EnsemblGenomes-Tr:EEB08157","UniProtKB/TrEMBL:B6K3V0"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":397,"start":372}},{"range":{"end":438,"start":409}},{"range":{"end":515,"start":494}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"}],"genes_by_uniquename":{"HGNC:17029":null,"SJAG_03291":null,"SPAC1002.10c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SGT1 protein","id":"PF07093","interpro_description":"Ecd family","interpro_id":"IPR010770","interpro_name":"Ecd","locations":[{"end":319,"start":23}],"match_end":319,"match_start":23,"name":"SGT1"},{"dbname":"PANTHER","id":"PTHR13060","interpro_description":"Ecd family","interpro_id":"IPR010770","interpro_name":"Ecd","locations":[{"end":573,"start":339}],"match_end":573,"match_start":339,"name":"SGT1 PROTEIN  HSGT1   SUPPRESSOR OF GCR2"},{"dbname":"COILS","id":"Coil","locations":[{"end":339,"start":319},{"end":527,"start":507}],"match_end":527,"match_start":319,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":397,"start":372},{"end":438,"start":409},{"end":515,"start":494}],"match_end":515,"match_start":372,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":438,"start":410}],"match_end":438,"match_start":410,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":801892,"start_pos":800077,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":448,"start":407}},{"range":{"end":476,"start":461}}],"name":"sgt1","ortholog_annotations":[{"gene_uniquename":"SJAG_03291","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17029","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03291","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.10c","reference_uniquename":"PMID:21511999"}],"product":"snRNP binding protein Sgt1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0070990"]}},"subset_termids":["GO:0005829","GO:0005634","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0045292":null,"GO:0070990":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03291.1"],"transcripts_by_uniquename":{"SJAG_03291.1":null},"uniprot_identifier":"B6K3V0","uniquename":"SJAG_03291"}


id: SJAG_03292
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76330],"is_not":false,"summary":null,"term":"GO:0016255"},{"annotations":[89259],"is_not":false,"summary":null,"term":"GO:0006506"}],"cellular_component":[{"annotations":[76329],"is_not":false,"summary":null,"term":"GO:0042765"}],"molecular_function":[{"annotations":[89260],"is_not":false,"summary":null,"term":"GO:0003923"}],"mondo":[{"annotations":[86920],"is_not":false,"summary":null,"term":"MONDO:0060627"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08158","InterPro:IPR007246","EnsemblGenomes-Gn:SJAG_03292","UniProtKB/TrEMBL:B6K3V1","GOA:B6K3V1"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"}],"genes_by_uniquename":{"HGNC:4446":null,"SJAG_03292":null,"SPAC1002.11":null,"YLR088W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Gaa1-like, GPI transamidase component","id":"PF04114","interpro_description":"GPI transamidase component Gaa1","interpro_id":"IPR007246","interpro_name":"Gaa1","locations":[{"end":535,"start":123}],"match_end":535,"match_start":123,"name":"Gaa1"},{"dbname":"PANTHER","id":"PTHR13304","interpro_description":"GPI transamidase component Gaa1","interpro_id":"IPR007246","interpro_name":"Gaa1","locations":[{"end":533,"start":8}],"match_end":533,"match_start":8,"name":"GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN"},{"dbname":"PIRSF","id":"PIRSF036762","interpro_description":"GPI transamidase component Gaa1","interpro_id":"IPR007246","interpro_name":"Gaa1","locations":[{"end":559,"start":1}],"match_end":559,"match_start":1,"name":"GAA1"}],"location":{"chromosome_name":"supercont5.2","end_pos":804032,"start_pos":802233,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":21,"start":9}},{"range":{"end":363,"start":348}}],"name":"gaa1","ortholog_annotations":[{"gene_uniquename":"SJAG_03292","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4446","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03292","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03292","ortholog_taxonid":4932,"ortholog_uniquename":"YLR088W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03292","ortholog_taxonid":4932,"ortholog_uniquename":"YLR088W","reference_uniquename":"PMID:26896847"}],"product":"GPI-anchor transamidase complex subunit Gaa1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003923"]}},"subset_termids":["GO:0140096","MONDO:0005066","MONDO:0006025","GO:0008233","GO:0051604","GO:0016769","GO:0005783","GO:0005789","MONDO:0002525","GO:0006629","MONDO:0024322"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003923":null,"GO:0006506":null,"GO:0016255":null,"GO:0042765":null,"MONDO:0060627":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":37,"start":20}},{"assigned_by":"TMHMM","range":{"end":390,"start":368}},{"assigned_by":"TMHMM","range":{"end":424,"start":402}},{"assigned_by":"TMHMM","range":{"end":445,"start":428}},{"assigned_by":"TMHMM","range":{"end":488,"start":466}},{"assigned_by":"TMHMM","range":{"end":522,"start":503}},{"assigned_by":"TMHMM","range":{"end":564,"start":542}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03292.1"],"transcripts_by_uniquename":{"SJAG_03292.1":null},"uniprot_identifier":"B6K3V1","uniquename":"SJAG_03292"}


id: SJAG_03293
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":346,"start":346}}],"cv_annotations":{"biological_process":[{"annotations":[89263],"is_not":false,"summary":null,"term":"GO:0009450"}],"cellular_component":[{"annotations":[89261],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[65490],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[77818],"is_not":false,"summary":null,"term":"GO:0004777"},{"annotations":[89265],"is_not":false,"summary":null,"term":"GO:0036243"}],"mondo":[{"annotations":[87029],"is_not":false,"summary":null,"term":"MONDO:0010083"}]},"dbxrefs":["InterPro:IPR029510","InterPro:IPR016161","InterPro:IPR016162","EnsemblGenomes-Tr:EEB08159","UniProtKB/TrEMBL:B6K3V2","InterPro:IPR015590","EnsemblGenomes-Gn:SJAG_03293","GOA:B6K3V2","InterPro:IPR010102","InterPro:IPR016163"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"}],"genes_by_uniquename":{"HGNC:408":null,"SJAG_03293":null,"SPAC1002.12c":null,"YBR006W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Aldehyde dehydrogenase family","id":"PF00171","interpro_description":"Aldehyde dehydrogenase domain","interpro_id":"IPR015590","interpro_name":"Aldehyde_DH_dom","locations":[{"end":570,"start":109}],"match_end":570,"match_start":109,"name":"Aldedh"},{"dbname":"CDD","description":"ALDH_F5_SSADH_GabD","id":"cd07103","locations":[{"end":572,"start":120}],"match_end":572,"match_start":120,"name":"ALDH_F5_SSADH_GabD"},{"dbname":"PROSITE_PATTERNS","description":"Aldehyde dehydrogenases glutamic acid active site.","id":"PS00687","interpro_description":"Aldehyde dehydrogenase, glutamic acid active site","interpro_id":"IPR029510","interpro_name":"Ald_DH_CS_GLU","locations":[{"end":352,"start":345}],"match_end":352,"match_start":345,"name":"ALDEHYDE_DEHYDR_GLU"},{"dbname":"FUNFAM","description":"Succinate-semialdehyde dehydrogenase I","id":"G3DSA:3.40.605.10:FF:000005","locations":[{"end":366,"start":115}],"match_end":366,"match_start":115},{"dbname":"FUNFAM","description":"Succinate-semialdehyde dehydrogenase I","id":"G3DSA:3.40.309.10:FF:000004","locations":[{"end":539,"start":349}],"match_end":539,"match_start":349},{"dbname":"SUPERFAMILY","id":"SSF53720","interpro_description":"Aldehyde/histidinol dehydrogenase","interpro_id":"IPR016161","interpro_name":"Ald_DH/histidinol_DH","locations":[{"end":573,"start":101}],"match_end":573,"match_start":101,"name":"ALDH-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.309.10","interpro_description":"Aldehyde dehydrogenase, C-terminal","interpro_id":"IPR016163","interpro_name":"Ald_DH_C","locations":[{"end":543,"start":349}],"match_end":543,"match_start":349,"name":"Aldehyde Dehydrogenase; Chain A, domain 2"},{"dbname":"GENE3D","id":"G3DSA:3.40.605.10","interpro_description":"Aldehyde dehydrogenase, N-terminal","interpro_id":"IPR016162","interpro_name":"Ald_DH_N","locations":[{"end":348,"start":107},{"end":569,"start":544}],"match_end":569,"match_start":107,"name":"Aldehyde Dehydrogenase; Chain A, domain 1"},{"dbname":"PANTHER","id":"PTHR43353","interpro_description":"Aldehyde Dehydrogenase Superfamily","interpro_id":"IPR050740","interpro_name":"Aldehyde_DH_Superfamily","locations":[{"end":572,"start":102}],"match_end":572,"match_start":102,"name":"SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL"},{"dbname":"NCBIFAM","description":"succinate-semialdehyde dehydrogenase","id":"TIGR01780","interpro_description":"Succinate semialdehyde dehydrogenase","interpro_id":"IPR010102","interpro_name":"Succ_semiAld_DH","locations":[{"end":568,"start":120}],"match_end":568,"match_start":120,"name":"SSADH"}],"location":{"chromosome_name":"supercont5.2","end_pos":805946,"start_pos":804219,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":346,"start":335}},{"range":{"end":369,"start":356}}],"name":"ssd1","ortholog_annotations":[{"gene_uniquename":"SJAG_03293","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:408","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03293","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03293","ortholog_taxonid":4932,"ortholog_uniquename":"YBR006W","reference_uniquename":"PMID:29761456"}],"product":"succinate-semialdehyde dehydrogenase [NAD(P)+] Ssd1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0036243","GO:0004777"]}},"subset_termids":["MONDO:0004736","GO:0006520","GO:0005829","GO:0016491","GO:0005739","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004777":null,"GO:0005739":null,"GO:0005829":null,"GO:0009450":null,"GO:0036243":null,"MONDO:0010083":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03293.1"],"transcripts_by_uniquename":{"SJAG_03293.1":null},"uniprot_identifier":"B6K3V2","uniquename":"SJAG_03293"}


id: SJAG_03295
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":423,"start":19}}],"cv_annotations":{"biological_process":[{"annotations":[73090],"is_not":false,"summary":null,"term":"GO:0031505"},{"annotations":[59017],"is_not":false,"summary":null,"term":"GO:0000272"},{"annotations":[89272],"is_not":false,"summary":null,"term":"GO:0000920"}],"cellular_component":[{"annotations":[73089],"is_not":false,"summary":null,"term":"GO:0009986"},{"annotations":[89267],"is_not":false,"summary":null,"term":"GO:0005576"},{"annotations":[73088],"is_not":false,"summary":null,"term":"GO:0009277"}],"molecular_function":[{"annotations":[89273],"is_not":false,"summary":null,"term":"GO:0008422"}],"sequence":[{"annotations":[82372],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08160","UniProtKB/TrEMBL:B6K3V3","EnsemblGenomes-Gn:SJAG_03295","GOA:B6K3V3","InterPro:IPR005556"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"}],"genes_by_uniquename":{"SJAG_03295":null,"SPAC1002.13c":null,"YIL123W":null,"YJL116C":null,"YKR042W":null,"YNL066W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Beta-glucosidase (SUN family)","id":"PF03856","interpro_description":"SUN family","interpro_id":"IPR005556","interpro_name":"SUN","locations":[{"end":410,"start":168}],"match_end":410,"match_start":168,"name":"SUN"},{"dbname":"PANTHER","id":"PTHR31316","interpro_description":"Secreted Beta-Glucosidase SUN","interpro_id":"IPR051526","interpro_name":"Beta-Glucosidase_SUN","locations":[{"end":422,"start":1}],"match_end":422,"match_start":1,"name":"BETA-GLUCOSIDASE-LIKE PROTEIN NCA3, MITOCHONDRIAL-RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":808461,"start_pos":807190,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":17,"start":6}},{"range":{"end":72,"start":31}},{"range":{"end":92,"start":77}},{"range":{"end":164,"start":97}},{"range":{"end":415,"start":396}}],"name":"psu1","ortholog_annotations":[{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YIL123W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YIL123W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YJL116C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YJL116C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YKR042W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YKR042W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YNL066W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YNL066W","reference_uniquename":"PMID:26896847"}],"product":"cell wall beta-glucosidase Psu1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":18,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008422"]}},"subset_termids":["GO:0005618","GO:0005975","GO:0071554","GO:0016798","GO:0005576","GO:0009986"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000272":null,"GO:0000920":null,"GO:0005576":null,"GO:0008422":null,"GO:0009277":null,"GO:0009986":null,"GO:0031505":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03295.1"],"transcripts_by_uniquename":{"SJAG_03295.1":null},"uniprot_identifier":"B6K3V3","uniquename":"SJAG_03295"}


id: SJAG_03296
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90869],"is_not":false,"summary":null,"term":"GO:0033617"}],"cellular_component":[{"annotations":[64040],"is_not":false,"summary":null,"term":"GO:0005743"}],"mondo":[{"annotations":[88376],"is_not":false,"summary":null,"term":"MONDO:0859160"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03296","EnsemblGenomes-Tr:EEB08161","GOA:B6K3V4","InterPro:IPR020164","UniProtKB/TrEMBL:B6K3V4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"}],"genes_by_uniquename":{"HGNC:20213":null,"SJAG_03296":null,"SPAC1486.08":null,"YJL003W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cytochrome c oxidase assembly protein COX16","id":"PF14138","interpro_description":"Cytochrome c oxidase assembly protein COX16","interpro_id":"IPR020164","interpro_name":"Cyt_c_Oxase_assmbl_COX16","locations":[{"end":93,"start":17}],"match_end":93,"match_start":17,"name":"COX16"},{"dbname":"PANTHER","id":"PTHR17130","locations":[{"end":96,"start":7}],"match_end":96,"match_start":7,"name":"MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25"}],"location":{"chromosome_name":"supercont5.2","end_pos":810076,"start_pos":809678,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":57,"start":48}}],"name":"cox16","ortholog_annotations":[{"gene_uniquename":"SJAG_03296","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20213","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03296","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03296","ortholog_taxonid":4932,"ortholog_uniquename":"YJL003W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03296","ortholog_taxonid":4932,"ortholog_uniquename":"YJL003W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial cytochrome c oxidase Cox2 assembly protein, Cox16","references_by_uniquename":{"GO_REF:0000044":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["MONDO:0005066","GO:0005739","GO:0065003","MONDO:0004069","GO:0007005"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0033617":null,"MONDO:0859160":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":37,"start":15}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03296.1"],"transcripts_by_uniquename":{"SJAG_03296.1":null},"uniprot_identifier":"B6K3V4","uniquename":"SJAG_03296"}


id: SJAG_03297
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90864],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[78435],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[78434],"is_not":false,"summary":null,"term":"GO:0070180"},{"annotations":[78437],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03297","InterPro:IPR000911","InterPro:IPR036769","InterPro:IPR036796","InterPro:IPR020783","UniProtKB/TrEMBL:B6K3V5","InterPro:IPR020784","EnsemblGenomes-Tr:EEB08162","InterPro:IPR006519","GOA:B6K3V5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"}],"genes_by_uniquename":{"HGNC:14042":null,"SJAG_03297":null,"SPAC1486.07c":null,"YNL185C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L11, N-terminal domain","id":"PF03946","interpro_description":"Large ribosomal subunit protein uL11, N-terminal","interpro_id":"IPR020784","interpro_name":"Ribosomal_uL11_N","locations":[{"end":69,"start":11}],"match_end":69,"match_start":11,"name":"Ribosomal_L11_N"},{"dbname":"PFAM","description":"Ribosomal protein L11, RNA binding domain","id":"PF00298","interpro_description":"Large ribosomal subunit protein uL11, C-terminal","interpro_id":"IPR020783","interpro_name":"Ribosomal_uL11_C","locations":[{"end":144,"start":75}],"match_end":144,"match_start":75,"name":"Ribosomal_L11"},{"dbname":"CDD","description":"Ribosomal_L11","id":"cd00349","interpro_description":"Ribosomal protein uL11","interpro_id":"IPR000911","interpro_name":"Ribosomal_uL11","locations":[{"end":144,"start":11}],"match_end":144,"match_start":11,"name":"Ribosomal_L11"},{"dbname":"SMART","id":"SM00649","interpro_description":"Ribosomal protein uL11","interpro_id":"IPR000911","interpro_name":"Ribosomal_uL11","locations":[{"end":145,"start":11}],"match_end":145,"match_start":11,"name":"rl11c"},{"dbname":"FUNFAM","description":"Mitochondrial ribosomal protein L11","id":"G3DSA:1.10.10.250:FF:000003","locations":[{"end":145,"start":72}],"match_end":145,"match_start":72},{"dbname":"FUNFAM","description":"50S ribosomal protein L11","id":"G3DSA:3.30.1550.10:FF:000005","locations":[{"end":72,"start":6}],"match_end":72,"match_start":6},{"dbname":"SUPERFAMILY","id":"SSF46906","interpro_description":"Large ribosomal subunit protein uL11, C-terminal domain superfamily","interpro_id":"IPR036769","interpro_name":"Ribosomal_uL11_C_sf","locations":[{"end":144,"start":70}],"match_end":144,"match_start":70,"name":"Ribosomal protein L11, C-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF54747","interpro_description":"Large ribosomal subunit protein uL11, N-terminal domain superfamily","interpro_id":"IPR036796","interpro_name":"Ribosomal_uL11_N_sf","locations":[{"end":74,"start":9}],"match_end":74,"match_start":9,"name":"Ribosomal L11/L12e N-terminal domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.1550.10","interpro_description":"Large ribosomal subunit protein uL11, N-terminal domain superfamily","interpro_id":"IPR036796","interpro_name":"Ribosomal_uL11_N_sf","locations":[{"end":71,"start":8}],"match_end":71,"match_start":8},{"dbname":"GENE3D","id":"G3DSA:1.10.10.250","interpro_description":"Large ribosomal subunit protein uL11, C-terminal domain superfamily","interpro_id":"IPR036769","interpro_name":"Ribosomal_uL11_C_sf","locations":[{"end":145,"start":72}],"match_end":145,"match_start":72},{"dbname":"PANTHER","id":"PTHR11661","interpro_description":"Ribosomal protein uL11","interpro_id":"IPR000911","interpro_name":"Ribosomal_uL11","locations":[{"end":145,"start":9}],"match_end":145,"match_start":9,"name":"60S RIBOSOMAL PROTEIN L12"},{"dbname":"HAMAP","description":"Large ribosomal subunit protein uL11 [rplK].","id":"MF_00736","interpro_description":"Ribosomal protein uL11","interpro_id":"IPR000911","interpro_name":"Ribosomal_uL11","locations":[{"end":146,"start":7}],"match_end":146,"match_start":7,"name":"Ribosomal_L11"},{"dbname":"NCBIFAM","description":"50S ribosomal protein L11","id":"TIGR01632","interpro_description":"Large ribosomal subunit protein uL11, bacterial-type","interpro_id":"IPR006519","interpro_name":"Ribosomal_uL11_bac-typ","locations":[{"end":145,"start":8}],"match_end":145,"match_start":8,"name":"L11_bact"}],"location":{"chromosome_name":"supercont5.2","end_pos":810853,"start_pos":810413,"strand":"forward"},"name":"mrpl19","ortholog_annotations":[{"gene_uniquename":"SJAG_03297","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14042","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03297","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03297","ortholog_taxonid":4932,"ortholog_uniquename":"YNL185C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03297","ortholog_taxonid":4932,"ortholog_uniquename":"YNL185C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial ribosomal protein subunit L11","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0070180"],"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0140053","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005762":null,"GO:0032543":null,"GO:0070180":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03297.1"],"transcripts_by_uniquename":{"SJAG_03297.1":null},"uniprot_identifier":"B6K3V5","uniquename":"SJAG_03297"}


id: SJAG_03298
data:
  {"cv_annotations":{"biological_process":[{"annotations":[81889],"is_not":false,"summary":null,"term":"GO:0034355"},{"annotations":[90860],"is_not":false,"summary":null,"term":"GO:0019358"}],"cellular_component":[{"annotations":[71056],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[81891],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90857],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[90858],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[81890],"is_not":false,"summary":null,"term":"GO:0004516"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03298","EnsemblGenomes-Tr:EEB08163","GOA:B6K3V6","InterPro:IPR040727","InterPro:IPR007229","InterPro:IPR036068","InterPro:IPR041525","UniProtKB/TrEMBL:B6K3V6","InterPro:IPR006406"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"}],"genes_by_uniquename":{"HGNC:30450":null,"SJAG_03298":null,"SPAC1486.06":null,"YOR209C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nicotinate phosphoribosyltransferase (NAPRTase) family","id":"PF04095","interpro_description":"Nicotinate/nicotinamide phosphoribosyltransferase","interpro_id":"IPR041525","interpro_name":"N/Namide_PRibTrfase","locations":[{"end":406,"start":165}],"match_end":406,"match_start":165,"name":"NAPRTase"},{"dbname":"PFAM","description":"Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain","id":"PF17767","interpro_description":"Nicotinate phosphoribosyltransferase, N-terminal domain","interpro_id":"IPR040727","interpro_name":"NAPRTase_N","locations":[{"end":131,"start":8}],"match_end":131,"match_start":8,"name":"NAPRTase_N"},{"dbname":"CDD","description":"PncB_like","id":"cd01401","interpro_description":"Nicotinate phosphoribosyltransferase","interpro_id":"IPR006406","interpro_name":"Nic_PRibTrfase","locations":[{"end":390,"start":5}],"match_end":390,"match_start":5,"name":"PncB_like"},{"dbname":"SUPERFAMILY","id":"SSF51690","interpro_description":"Nicotinate phosphoribosyltransferase-like, C-terminal","interpro_id":"IPR036068","interpro_name":"Nicotinate_pribotase-like_C","locations":[{"end":402,"start":121}],"match_end":402,"match_start":121,"name":"Nicotinate/Quinolinate PRTase C-terminal domain-like"},{"dbname":"SUPERFAMILY","id":"SSF54675","locations":[{"end":139,"start":4}],"match_end":139,"match_start":4,"name":"Nicotinate/Quinolinate PRTase N-terminal domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.20.140.10","locations":[{"end":408,"start":1}],"match_end":408,"match_start":1,"name":"nicotinate phosphoribosyltransferase"},{"dbname":"PANTHER","id":"PTHR11098","interpro_description":"Nicotinate phosphoribosyltransferase family","interpro_id":"IPR007229","interpro_name":"Nic_PRibTrfase-Fam","locations":[{"end":400,"start":4}],"match_end":400,"match_start":4,"name":"NICOTINATE PHOSPHORIBOSYLTRANSFERASE"},{"dbname":"PIRSF","id":"PIRSF000484","interpro_description":"Nicotinate phosphoribosyltransferase family","interpro_id":"IPR007229","interpro_name":"Nic_PRibTrfase-Fam","locations":[{"end":397,"start":1}],"match_end":397,"match_start":1,"name":"NAPRT"},{"dbname":"HAMAP","description":"Nicotinate phosphoribosyltransferase [pncB].","id":"MF_00570","interpro_description":"Nicotinate phosphoribosyltransferase","interpro_id":"IPR006406","interpro_name":"Nic_PRibTrfase","locations":[{"end":408,"start":1}],"match_end":408,"match_start":1,"name":"NAPRTase"},{"dbname":"NCBIFAM","description":"nicotinate phosphoribosyltransferase","id":"TIGR01514","interpro_description":"Nicotinate phosphoribosyltransferase","interpro_id":"IPR006406","interpro_name":"Nic_PRibTrfase","locations":[{"end":403,"start":3}],"match_end":403,"match_start":3,"name":"NAPRTase"},{"dbname":"NCBIFAM","description":"nicotinate phosphoribosyltransferase","id":"NF003704","locations":[{"end":402,"start":2}],"match_end":402,"match_start":2,"name":"PRK05321.1"}],"location":{"chromosome_name":"supercont5.2","end_pos":812530,"start_pos":811298,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":240,"start":226}}],"name":"npt1","ortholog_annotations":[{"gene_uniquename":"SJAG_03298","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30450","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03298","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03298","ortholog_taxonid":4932,"ortholog_uniquename":"YOR209C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03298","ortholog_taxonid":4932,"ortholog_uniquename":"YOR209C","reference_uniquename":"PMID:26896847"}],"product":"nicotinate phosphoribosyltransferase Npt1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004516"]}},"subset_termids":["GO:0016874","GO:0005739","GO:0055086","GO:0005829","GO:0005634","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004516":null,"GO:0005634":null,"GO:0005739":null,"GO:0005829":null,"GO:0019358":null,"GO:0034355":null,"GO:0140445":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03298.1"],"transcripts_by_uniquename":{"SJAG_03298.1":null},"uniprot_identifier":"B6K3V6","uniquename":"SJAG_03298"}


id: SJAG_03299
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77366],"is_not":false,"summary":null,"term":"GO:0000973"},{"annotations":[77372],"is_not":false,"summary":null,"term":"GO:0006606"},{"annotations":[90849],"is_not":false,"summary":null,"term":"GO:0000054"},{"annotations":[77371],"is_not":false,"summary":null,"term":"GO:0006405"},{"annotations":[77369],"is_not":false,"summary":null,"term":"GO:0034398"}],"cellular_component":[{"annotations":[90842],"is_not":false,"summary":null,"term":"GO:0031965"},{"annotations":[90843],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[121180,121273],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[77370],"is_not":false,"summary":null,"term":"GO:0044614"},{"annotations":[90846],"is_not":false,"summary":null,"term":"GO:0031080"}],"molecular_function":[{"annotations":[77368],"is_not":false,"summary":null,"term":"GO:0008139"},{"annotations":[90853],"is_not":false,"summary":null,"term":"GO:0008233"},{"annotations":[77373],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[77367],"is_not":false,"summary":null,"term":"GO:0017056"}]},"dbxrefs":["InterPro:IPR021967","GOA:B6K3V7","InterPro:IPR007230","InterPro:IPR037637","InterPro:IPR036903","InterPro:IPR037665","EnsemblGenomes-Tr:EEB08164","InterPro:IPR025574","UniProtKB/TrEMBL:B6K3V7","EnsemblGenomes-Gn:SJAG_03299"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":103,"start":1}},{"range":{"end":158,"start":127}},{"range":{"end":293,"start":237}},{"range":{"end":344,"start":306}},{"range":{"end":657,"start":634}},{"range":{"end":785,"start":753}},{"range":{"end":962,"start":937}},{"range":{"end":1083,"start":1047}}],"feature_publications":[{"reference_uniquename":"PMID:32109380","source":"canto"},{"reference_uniquename":"PMID:21802294","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"}],"genes_by_uniquename":{"HGNC:8068":null,"SJAG_03299":null,"SPAC1486.05":null,"YGL092W":null,"YKL068W":null,"YMR047C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nucleoporin FG repeat region","id":"PF13634","interpro_description":"Nucleoporin FG repeat","interpro_id":"IPR025574","interpro_name":"Nucleoporin_FG_rpt","locations":[{"end":114,"start":37},{"end":328,"start":241},{"end":567,"start":499}],"match_end":567,"match_start":37,"name":"Nucleoporin_FG"},{"dbname":"PFAM","description":"Nup98, Gle2-binding sequence","id":"PF21240","locations":[{"end":234,"start":211}],"match_end":234,"match_start":211,"name":"Nup98_GLEBS"},{"dbname":"PFAM","description":"Nup98-96 autopeptidase S59","id":"PF04096","locations":[{"end":935,"start":791}],"match_end":935,"match_start":791,"name":"Nucleoporin2"},{"dbname":"PFAM","description":"Nuclear protein 96","id":"PF12110","interpro_description":"Nuclear pore complex protein NUP96, C-terminal domain","interpro_id":"IPR021967","interpro_name":"Nup98_C","locations":[{"end":1636,"start":1337}],"match_end":1636,"match_start":1337,"name":"Nup96"},{"dbname":"PROSITE_PROFILES","description":"NUP C-terminal domain profile.","id":"PS51434","interpro_description":"Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain","interpro_id":"IPR007230","interpro_name":"Nup98_auto-Pept-S59_dom","locations":[{"end":930,"start":790}],"match_end":930,"match_start":790,"name":"NUP_C"},{"dbname":"FUNFAM","description":"Nucleoporin SONB, putative","id":"G3DSA:3.30.1610.10:FF:000003","locations":[{"end":937,"start":780}],"match_end":937,"match_start":780},{"dbname":"FUNFAM","description":"Nuclear pore complex protein Nup98-Nup96","id":"G3DSA:1.10.10.2360:FF:000001","locations":[{"end":239,"start":189}],"match_end":239,"match_start":189},{"dbname":"SUPERFAMILY","id":"SSF82215","interpro_description":"Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily","interpro_id":"IPR036903","interpro_name":"Nup98_auto-Pept-S59_dom_sf","locations":[{"end":937,"start":788}],"match_end":937,"match_start":788,"name":"C-terminal autoproteolytic domain of nucleoporin nup98"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.2360","locations":[{"end":239,"start":187}],"match_end":239,"match_start":187},{"dbname":"GENE3D","id":"G3DSA:3.30.1610.10","interpro_description":"Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily","interpro_id":"IPR036903","interpro_name":"Nup98_auto-Pept-S59_dom_sf","locations":[{"end":937,"start":779}],"match_end":937,"match_start":779,"name":"Peptidase S59, nucleoporin"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.690","locations":[{"end":1411,"start":1320}],"match_end":1411,"match_start":1320},{"dbname":"PANTHER","id":"PTHR23198","interpro_description":"Nucleoporin peptidase S59-like","interpro_id":"IPR037665","interpro_name":"Nucleoporin_S59-like","locations":[{"end":976,"start":449}],"match_end":976,"match_start":449,"name":"NUCLEOPORIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":103,"start":1},{"end":158,"start":127},{"end":293,"start":237},{"end":344,"start":306},{"end":657,"start":634},{"end":785,"start":753},{"end":962,"start":937},{"end":1083,"start":1047}],"match_end":1083,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Glycine-rich","description":"consensus disorder prediction","id":"mobidb-lite-Glycine-rich","locations":[{"end":39,"start":26}],"match_end":39,"match_start":26,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":71,"start":40},{"end":154,"start":136},{"end":260,"start":247},{"end":292,"start":267},{"end":1076,"start":1065}],"match_end":1076,"match_start":40,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":948,"start":937}],"match_end":948,"match_start":937,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":83,"start":72},{"end":103,"start":90},{"end":246,"start":237},{"end":651,"start":635}],"match_end":651,"match_start":72,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":959,"start":949}],"match_end":959,"match_start":949,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":818875,"start_pos":813506,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":70,"start":23}},{"range":{"end":146,"start":135}},{"range":{"end":165,"start":149}},{"range":{"end":303,"start":246}},{"range":{"end":346,"start":311}},{"range":{"end":437,"start":350}},{"range":{"end":453,"start":440}},{"range":{"end":480,"start":470}},{"range":{"end":552,"start":507}},{"range":{"end":569,"start":557}},{"range":{"end":593,"start":584}},{"range":{"end":629,"start":619}},{"range":{"end":780,"start":773}},{"range":{"end":945,"start":936}},{"range":{"end":1097,"start":1060}}],"name":"nup189","ortholog_annotations":[{"gene_uniquename":"SJAG_03299","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8068","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03299","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03299","ortholog_taxonid":4932,"ortholog_uniquename":"YGL092W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03299","ortholog_taxonid":4932,"ortholog_uniquename":"YKL068W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03299","ortholog_taxonid":4932,"ortholog_uniquename":"YMR047C","reference_uniquename":"PMID:26896847"}],"product":"nucleoporin Nup98 and Nup96","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21802294":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:32109380":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008139","GO:0003723"],"not-binding":["GO:0008233","GO:0017056"]}},"subset_termids":["GO:0008233","GO:0005198","GO:0042254","GO:0034399","GO:0140096","GO:0005643","GO:0006913","GO:0005634","GO:0005048"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000054":null,"GO:0000973":null,"GO:0003723":null,"GO:0005643":null,"GO:0006405":null,"GO:0006606":null,"GO:0008139":null,"GO:0008233":null,"GO:0017056":null,"GO:0031080":null,"GO:0031965":null,"GO:0034398":null,"GO:0034399":null,"GO:0044614":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03299.1"],"transcripts_by_uniquename":{"SJAG_03299.1":null},"uniprot_identifier":"B6K3V7","uniquename":"SJAG_03299"}


id: SJAG_03300
data:
  {"coiled_coil_coords":[{"range":{"end":113,"start":65}},{"range":{"end":179,"start":135}},{"range":{"end":243,"start":191}},{"range":{"end":328,"start":284}},{"range":{"end":350,"start":330}},{"range":{"end":413,"start":379}},{"range":{"end":476,"start":435}},{"range":{"end":555,"start":535}},{"range":{"end":674,"start":629}},{"range":{"end":751,"start":731}},{"range":{"end":803,"start":773}},{"range":{"end":871,"start":830}},{"range":{"end":932,"start":898}},{"range":{"end":985,"start":940}},{"range":{"end":1056,"start":1018}},{"range":{"end":1101,"start":1067}},{"range":{"end":1179,"start":1138}},{"range":{"end":1244,"start":1224}},{"range":{"end":1279,"start":1252}},{"range":{"end":1350,"start":1288}},{"range":{"end":1397,"start":1370}},{"range":{"end":1458,"start":1410}},{"range":{"end":1519,"start":1464}},{"range":{"end":1629,"start":1609}}],"cv_annotations":{"biological_process":[{"annotations":[79300],"is_not":false,"summary":null,"term":"GO:0006406"},{"annotations":[90840],"is_not":false,"summary":null,"term":"GO:0120292"},{"annotations":[67485],"is_not":false,"summary":null,"term":"GO:0006606"}],"cellular_component":[{"annotations":[90836],"is_not":false,"summary":null,"term":"GO:0044615"},{"annotations":[90837],"is_not":false,"summary":null,"term":"GO:0140602"}],"molecular_function":[{"annotations":[79298],"is_not":false,"summary":null,"term":"GO:0017056"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03300","GOA:B6K3V8","UniProtKB/TrEMBL:B6K3V8","EnsemblGenomes-Tr:EEB08165","InterPro:IPR012929"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":1120,"start":1096}},{"range":{"end":1680,"start":1621}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"}],"genes_by_uniquename":{"SJAG_03300":null,"SPAC1486.04c":null,"YIL149C":null,"YKR095W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"TPR/MLP1/MLP2-like protein","id":"PF07926","interpro_description":"Nucleoprotein TPR/MLP1","interpro_id":"IPR012929","interpro_name":"TPR/MLP1","locations":[{"end":1106,"start":1010}],"match_end":1106,"match_start":1010,"name":"TPR_MLP1_2"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.1490","locations":[{"end":998,"start":829}],"match_end":998,"match_start":829},{"dbname":"PANTHER","id":"PTHR18898","locations":[{"end":1668,"start":20}],"match_end":1668,"match_start":20,"name":"NUCLEOPROTEIN TPR-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":113,"start":65},{"end":179,"start":135},{"end":243,"start":191},{"end":328,"start":284},{"end":350,"start":330},{"end":413,"start":379},{"end":476,"start":435},{"end":555,"start":535},{"end":674,"start":629},{"end":751,"start":731},{"end":803,"start":773},{"end":871,"start":830},{"end":932,"start":898},{"end":985,"start":940},{"end":1056,"start":1018},{"end":1101,"start":1067},{"end":1179,"start":1138},{"end":1244,"start":1224},{"end":1279,"start":1252},{"end":1350,"start":1288},{"end":1397,"start":1370},{"end":1458,"start":1410},{"end":1519,"start":1464},{"end":1629,"start":1609}],"match_end":1629,"match_start":65,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":1120,"start":1096},{"end":1680,"start":1621}],"match_end":1680,"match_start":1096,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":1650,"start":1638}],"match_end":1650,"match_start":1638,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":1120,"start":1099},{"end":1637,"start":1621}],"match_end":1637,"match_start":1099,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":1680,"start":1664}],"match_end":1680,"match_start":1664,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":824233,"start_pos":819191,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":62,"start":47}},{"range":{"end":171,"start":159}},{"range":{"end":227,"start":216}},{"range":{"end":795,"start":780}},{"range":{"end":1091,"start":1074}},{"range":{"end":1172,"start":1154}},{"range":{"end":1195,"start":1183}},{"range":{"end":1293,"start":1281}},{"range":{"end":1448,"start":1431}},{"range":{"end":1469,"start":1459}},{"range":{"end":1654,"start":1637}}],"name":"alm1","ortholog_annotations":[{"gene_uniquename":"SJAG_03300","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03300","ortholog_taxonid":4932,"ortholog_uniquename":"YIL149C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03300","ortholog_taxonid":4932,"ortholog_uniquename":"YKR095W","reference_uniquename":"PMID:26896847"}],"product":"nucleoporin Alm1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0017056"]}},"subset_termids":["GO:0006913","GO:0005198","GO:0005643","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006406":null,"GO:0006606":null,"GO:0017056":null,"GO:0044615":null,"GO:0120292":null,"GO:0140602":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03300.1"],"transcripts_by_uniquename":{"SJAG_03300.1":null},"uniprot_identifier":"B6K3V8","uniquename":"SJAG_03300"}


id: SJAG_03301
data:
  {"coiled_coil_coords":[{"range":{"end":281,"start":261}},{"range":{"end":670,"start":650}}],"cv_annotations":{"biological_process":[{"annotations":[90831],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[80469],"is_not":false,"summary":null,"term":"GO:0000390"}],"cellular_component":[{"annotations":[80468],"is_not":false,"summary":null,"term":"GO:0071008"}],"molecular_function":[{"annotations":[90833],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08166","InterPro:IPR000467","UniProtKB/TrEMBL:B6K3V9","GOA:B6K3V9","InterPro:IPR022783","EnsemblGenomes-Gn:SJAG_03301"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":25,"start":1}},{"range":{"end":169,"start":139}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"}],"genes_by_uniquename":{"HGNC:17165":null,"SJAG_03301":null,"SPAC1486.03c":null,"YLR424W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"G-patch domain","id":"PF01585","interpro_description":"G-patch domain","interpro_id":"IPR000467","interpro_name":"G_patch_dom","locations":[{"end":130,"start":87}],"match_end":130,"match_start":87,"name":"G-patch"},{"dbname":"PFAM","description":"GC-rich sequence DNA-binding factor-like protein","id":"PF07842","interpro_description":"GCF, C-terminal","interpro_id":"IPR022783","interpro_name":"GCFC_dom","locations":[{"end":591,"start":302}],"match_end":591,"match_start":302,"name":"GCFC"},{"dbname":"PROSITE_PROFILES","description":"G-patch domain profile.","id":"PS50174","interpro_description":"G-patch domain","interpro_id":"IPR000467","interpro_name":"G_patch_dom","locations":[{"end":133,"start":87}],"match_end":133,"match_start":87,"name":"G_PATCH"},{"dbname":"SMART","id":"SM00443","interpro_description":"G-patch domain","interpro_id":"IPR000467","interpro_name":"G_patch_dom","locations":[{"end":131,"start":85}],"match_end":131,"match_start":85,"name":"G-patch_5"},{"dbname":"PANTHER","id":"PTHR23329","interpro_description":"TFP11/STIP/Ntr1","interpro_id":"IPR045211","interpro_name":"TFP11/STIP/Ntr1","locations":[{"end":756,"start":16}],"match_end":756,"match_start":16,"name":"TUFTELIN-INTERACTING PROTEIN 11-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":281,"start":261},{"end":670,"start":650}],"match_end":670,"match_start":261,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":25,"start":1},{"end":169,"start":139}],"match_end":169,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":826890,"start_pos":824500,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":16,"start":6}},{"range":{"end":64,"start":50}},{"range":{"end":171,"start":154}},{"range":{"end":673,"start":658}}],"name":"ntr1","ortholog_annotations":[{"gene_uniquename":"SJAG_03301","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17165","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03301","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03301","ortholog_taxonid":4932,"ortholog_uniquename":"YLR424W","reference_uniquename":"PMID:29761456"}],"product":"RNA-binding splicing factor Ntr1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0005634","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000390":null,"GO:0003723":null,"GO:0045292":null,"GO:0071008":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03301.1"],"transcripts_by_uniquename":{"SJAG_03301.1":null},"uniprot_identifier":"B6K3V9","uniquename":"SJAG_03301"}


id: SJAG_03302
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90826],"is_not":false,"summary":null,"term":"GO:0032933"}],"cellular_component":[{"annotations":[90824],"is_not":false,"summary":null,"term":"GO:0044695"},{"annotations":[90825],"is_not":false,"summary":null,"term":"GO:0000139"}],"molecular_function":[{"annotations":[90827],"is_not":false,"summary":null,"term":"GO:0061630"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03302","GOA:B6K3W0","EnsemblGenomes-Tr:EEB08167","UniProtKB/TrEMBL:B6K3W0"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":257,"start":225}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"}],"genes_by_uniquename":{"HGNC:20486":null,"SJAG_03302":null,"SPAC1486.02c":null,"YOL073C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"SUPERFAMILY","id":"SSF144091","interpro_description":"Rhomboid-like superfamily","interpro_id":"IPR035952","interpro_name":"Rhomboid-like_sf","locations":[{"end":184,"start":10}],"match_end":184,"match_start":10,"name":"Rhomboid-like"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":257,"start":225}],"match_end":257,"match_start":225,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":828228,"start_pos":827296,"strand":"forward"},"name":"dsc2","ortholog_annotations":[{"gene_uniquename":"SJAG_03302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20486","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03302","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03302","ortholog_taxonid":4932,"ortholog_uniquename":"YOL073C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03302","ortholog_taxonid":4932,"ortholog_uniquename":"YOL073C","reference_uniquename":"PMID:26896847"}],"product":"Golgi Dsc E3 ligase complex transmembrane subunit, C-terminal UBA domain Dsc2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0061630"]}},"subset_termids":["GO:0019787","GO:0005794","GO:0016746","GO:0140096","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0032933":null,"GO:0044695":null,"GO:0061630":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":37,"start":15}},{"assigned_by":"TMHMM","range":{"end":113,"start":91}},{"assigned_by":"TMHMM","range":{"end":150,"start":128}},{"assigned_by":"TMHMM","range":{"end":185,"start":163}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03302.1"],"transcripts_by_uniquename":{"SJAG_03302.1":null},"uniprot_identifier":"B6K3W0","uniquename":"SJAG_03302"}


id: SJAG_03303
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"Mn(2+)","range":{"end":50,"start":50}},{"assigned_by":"UniProtKB","ligand":"Mn(2+)","range":{"end":96,"start":96}},{"assigned_by":"UniProtKB","ligand":"Mn(2+)","range":{"end":181,"start":181}},{"assigned_by":"UniProtKB","ligand":"Mn(2+)","range":{"end":185,"start":185}}],"cv_annotations":{"biological_process":[{"annotations":[90821],"is_not":false,"summary":null,"term":"GO:0019430"}],"cellular_component":[{"annotations":[90819],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[79028],"is_not":false,"summary":null,"term":"GO:0030145"},{"annotations":[79027],"is_not":false,"summary":null,"term":"GO:0004784"}],"mondo":[{"annotations":[89166],"is_not":false,"summary":null,"term":"MONDO:0012970"}]},"dbxrefs":["InterPro:IPR036314","InterPro:IPR036324","InterPro:IPR019832","InterPro:IPR019833","UniProtKB/TrEMBL:B6K3W1","InterPro:IPR001189","EnsemblGenomes-Gn:SJAG_03303","EnsemblGenomes-Tr:EEB08168","GOA:B6K3W1","InterPro:IPR019831"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"}],"genes_by_uniquename":{"HGNC:11180":null,"SJAG_03303":null,"SPAC1486.01":null,"YHR008C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Iron/manganese superoxide dismutases, alpha-hairpin domain","id":"PF00081","interpro_description":"Manganese/iron superoxide dismutase, N-terminal","interpro_id":"IPR019831","interpro_name":"Mn/Fe_SOD_N","locations":[{"end":104,"start":27}],"match_end":104,"match_start":27,"name":"Sod_Fe_N"},{"dbname":"PFAM","description":"Iron/manganese superoxide dismutases, C-terminal domain","id":"PF02777","interpro_description":"Manganese/iron superoxide dismutase, C-terminal","interpro_id":"IPR019832","interpro_name":"Mn/Fe_SOD_C","locations":[{"end":214,"start":117}],"match_end":214,"match_start":117,"name":"Sod_Fe_C"},{"dbname":"PROSITE_PATTERNS","description":"Manganese and iron superoxide dismutases signature.","id":"PS00088","interpro_description":"Manganese/iron superoxide dismutase, binding site","interpro_id":"IPR019833","interpro_name":"Mn/Fe_SOD_BS","locations":[{"end":188,"start":181}],"match_end":188,"match_start":181,"name":"SOD_MN"},{"dbname":"PRINTS","description":"Manganese superoxide dismutase signature","id":"PR01703","interpro_description":"Manganese/iron superoxide dismutase","interpro_id":"IPR001189","interpro_name":"Mn/Fe_SOD","locations":[{"end":40,"start":29},{"end":63,"start":50},{"end":100,"start":87},{"end":152,"start":144},{"end":191,"start":179}],"match_end":191,"match_start":29,"name":"MNSODISMTASE"},{"dbname":"FUNFAM","description":"Superoxide dismutase","id":"G3DSA:1.10.287.990:FF:000001","locations":[{"end":104,"start":43}],"match_end":104,"match_start":43},{"dbname":"FUNFAM","description":"Superoxide dismutase [Fe]","id":"G3DSA:3.55.40.20:FF:000004","locations":[{"end":217,"start":106}],"match_end":217,"match_start":106},{"dbname":"SUPERFAMILY","id":"SSF46609","interpro_description":"Manganese/iron superoxide dismutase, N-terminal domain superfamily","interpro_id":"IPR036324","interpro_name":"Mn/Fe_SOD_N_sf","locations":[{"end":105,"start":20}],"match_end":105,"match_start":20,"name":"Fe,Mn superoxide dismutase (SOD), N-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF54719","interpro_description":"Manganese/iron superoxide dismutase, C-terminal domain superfamily","interpro_id":"IPR036314","interpro_name":"SOD_C_sf","locations":[{"end":216,"start":110}],"match_end":216,"match_start":110,"name":"Fe,Mn superoxide dismutase (SOD), C-terminal domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.990","interpro_description":"Manganese/iron superoxide dismutase, N-terminal domain superfamily","interpro_id":"IPR036324","interpro_name":"Mn/Fe_SOD_N_sf","locations":[{"end":104,"start":43}],"match_end":104,"match_start":43,"name":"Fe,Mn superoxide dismutase (SOD) domain"},{"dbname":"GENE3D","id":"G3DSA:3.55.40.20","interpro_description":"Manganese/iron superoxide dismutase, C-terminal domain superfamily","interpro_id":"IPR036314","interpro_name":"SOD_C_sf","locations":[{"end":217,"start":105}],"match_end":217,"match_start":105},{"dbname":"PANTHER","id":"PTHR11404","interpro_description":"Iron/Manganese Superoxide Dismutase","interpro_id":"IPR050265","interpro_name":"Fe/Mn_Superoxide_Dismutase","locations":[{"end":216,"start":16}],"match_end":216,"match_start":16,"name":"SUPEROXIDE DISMUTASE 2"},{"dbname":"PIRSF","id":"PIRSF000349","interpro_description":"Manganese/iron superoxide dismutase","interpro_id":"IPR001189","interpro_name":"Mn/Fe_SOD","locations":[{"end":217,"start":3}],"match_end":217,"match_start":3,"name":"MnSOD_FeSOD"}],"location":{"chromosome_name":"supercont5.2","end_pos":829356,"start_pos":828608,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":50,"start":41}}],"name":"sod2","ortholog_annotations":[{"gene_uniquename":"SJAG_03303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11180","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03303","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03303","ortholog_taxonid":4932,"ortholog_uniquename":"YHR008C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03303","ortholog_taxonid":4932,"ortholog_uniquename":"YHR008C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial superoxide dismutase Sod2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030145"],"not-binding":["GO:0004784"]}},"subset_termids":["GO:0016491","GO:0005739","GO:0098754"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004784":null,"GO:0005759":null,"GO:0019430":null,"GO:0030145":null,"MONDO:0012970":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03303.1"],"transcripts_by_uniquename":{"SJAG_03303.1":null},"uniprot_identifier":"B6K3W1","uniquename":"SJAG_03303"}


id: SJAG_03304
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6K3W2","EnsemblGenomes-Tr:EEB08169","EnsemblGenomes-Gn:SJAG_03304"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":58,"start":19}},{"range":{"end":129,"start":89}},{"range":{"end":246,"start":201}},{"range":{"end":324,"start":303}},{"range":{"end":448,"start":420}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"}],"genes_by_uniquename":{"SJAG_03304":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":58,"start":19},{"end":129,"start":89},{"end":246,"start":201},{"end":324,"start":303},{"end":448,"start":420}],"match_end":448,"match_start":19,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":103,"start":89}],"match_end":103,"match_start":89,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":58,"start":49},{"end":113,"start":104},{"end":241,"start":212}],"match_end":241,"match_start":49,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":832248,"start_pos":830902,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":102,"start":83}},{"range":{"end":324,"start":313}}],"product":"conserved fungal family","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_03304.1"],"transcripts_by_uniquename":{"SJAG_03304.1":null},"uniprot_identifier":"B6K3W2","uniquename":"SJAG_03304"}


id: SJAG_03305
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71844],"is_not":false,"summary":null,"term":"GO:0008654"}],"molecular_function":[{"annotations":[71842],"is_not":false,"summary":null,"term":"GO:0004366"},{"annotations":[71843],"is_not":false,"summary":null,"term":"GO:0016287"}]},"dbxrefs":["InterPro:IPR002123","UniProtKB/TrEMBL:B6K3W3","EnsemblGenomes-Gn:SJAG_03305","GOA:B6K3W3","EnsemblGenomes-Tr:EEB08170"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":703,"start":629}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"}],"genes_by_uniquename":{"SJAG_03305":null,"YBL011W":null,"YKR067W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Acyltransferase","id":"PF01553","interpro_description":"Phospholipid/glycerol acyltransferase","interpro_id":"IPR002123","interpro_name":"Plipid/glycerol_acylTrfase","locations":[{"end":112,"start":33},{"end":255,"start":184}],"match_end":255,"match_start":33,"name":"Acyltransferase"},{"dbname":"CDD","description":"LPLAT_AAK14816-like","id":"cd07992","locations":[{"end":297,"start":20}],"match_end":297,"match_start":20,"name":"LPLAT_AAK14816-like"},{"dbname":"SMART","id":"SM00563","interpro_description":"Phospholipid/glycerol acyltransferase","interpro_id":"IPR002123","interpro_name":"Plipid/glycerol_acylTrfase","locations":[{"end":258,"start":48}],"match_end":258,"match_start":48,"name":"plsc_2"},{"dbname":"SUPERFAMILY","id":"SSF69593","locations":[{"end":285,"start":196}],"match_end":285,"match_start":196,"name":"Glycerol-3-phosphate (1)-acyltransferase"},{"dbname":"PANTHER","id":"PTHR31605","interpro_description":"Glycerol-3-phosphate O-acyltransferase","interpro_id":"IPR052744","interpro_name":"GPAT/DAPAT","locations":[{"end":689,"start":7}],"match_end":689,"match_start":7,"name":"GLYCEROL-3-PHOSPHATE O-ACYLTRANSFERASE 1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":703,"start":629}],"match_end":703,"match_start":629,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":661,"start":643}],"match_end":661,"match_start":643,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":703,"start":690}],"match_end":703,"match_start":690,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":835346,"start_pos":833235,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":660,"start":642}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03305","ortholog_taxonid":4932,"ortholog_uniquename":"YBL011W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03305","ortholog_taxonid":4932,"ortholog_uniquename":"YKR067W","reference_uniquename":"PMID:26896847"}],"product":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1-like","references_by_uniquename":{"GO_REF:0000033":null,"PMID:26896847":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016287","GO:0004366"]}},"subset_termids":["GO:0016746","GO:0006629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004366":null,"GO:0008654":null,"GO:0016287":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":431,"start":409}},{"assigned_by":"TMHMM","range":{"end":474,"start":452}},{"assigned_by":"TMHMM","range":{"end":511,"start":489}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03305.1"],"transcripts_by_uniquename":{"SJAG_03305.1":null},"uniprot_identifier":"B6K3W3","uniquename":"SJAG_03305"}


id: SJAG_03306
data:
  {"coiled_coil_coords":[{"range":{"end":340,"start":313}}],"cv_annotations":{"biological_process":[{"annotations":[79497],"is_not":false,"summary":null,"term":"GO:0006532"},{"annotations":[89672],"is_not":false,"summary":null,"term":"GO:0006536"},{"annotations":[89673],"is_not":false,"summary":null,"term":"GO:0043490"}],"cellular_component":[{"annotations":[79496],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[89670],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[79495],"is_not":false,"summary":null,"term":"GO:0004069"},{"annotations":[67736],"is_not":false,"summary":null,"term":"GO:0030170"}]},"dbxrefs":["GOA:B6K3W4","UniProtKB/TrEMBL:B6K3W4","EnsemblGenomes-Tr:EEB08171","InterPro:IPR000796","InterPro:IPR004839","InterPro:IPR015421","EnsemblGenomes-Gn:SJAG_03306","InterPro:IPR015424","InterPro:IPR015422"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"}],"genes_by_uniquename":{"HGNC:28487":null,"HGNC:4432":null,"SJAG_03306":null,"SPAC10F6.13c":null,"YLR027C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Aminotransferase class I and II","id":"PF00155","interpro_description":"Aminotransferase, class I/classII, large domain","interpro_id":"IPR004839","interpro_name":"Aminotransferase_I/II_large","locations":[{"end":401,"start":32}],"match_end":401,"match_start":32,"name":"Aminotran_1_2"},{"dbname":"CDD","description":"AAT_like","id":"cd00609","locations":[{"end":401,"start":33}],"match_end":401,"match_start":33,"name":"AAT_like"},{"dbname":"PRINTS","description":"Aspartate aminotransferase signature","id":"PR00799","interpro_description":"Aspartate/other aminotransferase","interpro_id":"IPR000796","interpro_name":"Asp_trans","locations":[{"end":202,"start":183},{"end":226,"start":214},{"end":307,"start":282},{"end":368,"start":350}],"match_end":368,"match_start":183,"name":"TRANSAMINASE"},{"dbname":"FUNFAM","description":"Aspartate aminotransferase","id":"G3DSA:3.40.640.10:FF:000064","locations":[{"end":309,"start":65}],"match_end":309,"match_start":65},{"dbname":"FUNFAM","description":"Aspartate aminotransferase","id":"G3DSA:3.90.1150.10:FF:000001","locations":[{"end":401,"start":298}],"match_end":401,"match_start":298},{"dbname":"SUPERFAMILY","id":"SSF53383","interpro_description":"Pyridoxal phosphate-dependent transferase","interpro_id":"IPR015424","interpro_name":"PyrdxlP-dep_Trfase","locations":[{"end":406,"start":5}],"match_end":406,"match_start":5,"name":"PLP-dependent transferases"},{"dbname":"GENE3D","id":"G3DSA:3.40.640.10","interpro_description":"Pyridoxal phosphate-dependent transferase, major domain","interpro_id":"IPR015421","interpro_name":"PyrdxlP-dep_Trfase_major","locations":[{"end":309,"start":65}],"match_end":309,"match_start":65},{"dbname":"GENE3D","id":"G3DSA:3.90.1150.10","interpro_description":"Pyridoxal phosphate-dependent transferase, small domain","interpro_id":"IPR015422","interpro_name":"PyrdxlP-dep_Trfase_small","locations":[{"end":64,"start":9},{"end":401,"start":310}],"match_end":401,"match_start":9,"name":"Aspartate Aminotransferase, domain 1"},{"dbname":"PANTHER","id":"PTHR11879","interpro_description":"Aspartate/other aminotransferase","interpro_id":"IPR000796","interpro_name":"Asp_trans","locations":[{"end":407,"start":6}],"match_end":407,"match_start":6,"name":"ASPARTATE AMINOTRANSFERASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":340,"start":313}],"match_end":340,"match_start":313,"name":"Coil"},{"dbname":"NCBIFAM","description":"aromatic amino acid transaminase","id":"NF006719","locations":[{"end":403,"start":6}],"match_end":403,"match_start":6,"name":"PRK09257.1"}],"location":{"chromosome_name":"supercont5.2","end_pos":837982,"start_pos":836753,"strand":"reverse"},"name":"caa1","ortholog_annotations":[{"gene_uniquename":"SJAG_03306","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28487","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03306","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4432","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03306","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC10F6.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03306","ortholog_taxonid":4932,"ortholog_uniquename":"YLR027C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03306","ortholog_taxonid":4932,"ortholog_uniquename":"YLR027C","reference_uniquename":"PMID:26896847"}],"product":"cytoplasmic aspartate aminotransferase Caa1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030170"],"not-binding":["GO:0004069"]}},"subset_termids":["GO:0016769","GO:0005634","GO:0006520","GO:0005829","GO:0055086"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004069":null,"GO:0005634":null,"GO:0005829":null,"GO:0006532":null,"GO:0006536":null,"GO:0030170":null,"GO:0043490":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03306.1"],"transcripts_by_uniquename":{"SJAG_03306.1":null},"uniprot_identifier":"B6K3W4","uniquename":"SJAG_03306"}


id: SJAG_03309
data:
  {"cv_annotations":{"biological_process":[{"annotations":[89679],"is_not":false,"summary":null,"term":"GO:0035556"},{"annotations":[89680],"is_not":false,"summary":null,"term":"GO:1905287"},{"annotations":[89681],"is_not":false,"summary":null,"term":"GO:1900237"},{"annotations":[89682],"is_not":false,"summary":null,"term":"GO:1902472"}],"cellular_component":[{"annotations":[89677],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[89678],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[89683],"is_not":false,"summary":null,"term":"GO:0004865"}]},"dbxrefs":["GOA:B6K3W5","EnsemblGenomes-Tr:EEB08172","UniProtKB/TrEMBL:B6K3W5","EnsemblGenomes-Gn:SJAG_03309","InterPro:IPR006760"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":140,"start":54}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"}],"genes_by_uniquename":{"HGNC:16967":null,"HGNC:3360":null,"SJAG_03309":null,"SPAC10F6.16":null,"YHR132W-A":null,"YNL157W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"cAMP-regulated phosphoprotein/endosulfine conserved region","id":"PF04667","interpro_description":"Endosulphine","interpro_id":"IPR006760","interpro_name":"Endosulphine","locations":[{"end":86,"start":11}],"match_end":86,"match_start":11,"name":"Endosulfine"},{"dbname":"PANTHER","id":"PTHR10358","interpro_description":"Endosulphine","interpro_id":"IPR006760","interpro_name":"Endosulphine","locations":[{"end":98,"start":3}],"match_end":98,"match_start":3,"name":"ENDOSULFINE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":140,"start":54}],"match_end":140,"match_start":54,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":128,"start":107}],"match_end":128,"match_start":107,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":140,"start":129}],"match_end":140,"match_start":129,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":841783,"start_pos":840963,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":127,"start":81}}],"name":"igo1","ortholog_annotations":[{"gene_uniquename":"SJAG_03309","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16967","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03309","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3360","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03309","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC10F6.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03309","ortholog_taxonid":4932,"ortholog_uniquename":"YHR132W-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03309","ortholog_taxonid":4932,"ortholog_uniquename":"YHR132W-A","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03309","ortholog_taxonid":4932,"ortholog_uniquename":"YNL157W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03309","ortholog_taxonid":4932,"ortholog_uniquename":"YNL157W","reference_uniquename":"PMID:26896847"}],"product":"serine/threonine protein phosphatase inhibitor, endosulfine Igo1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004865"]}},"subset_termids":["GO:0023052","GO:0000281","GO:0005634","GO:0005829","GO:0030234","GO:0000747","GO:0044772","GO:0098772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004865":null,"GO:0005634":null,"GO:0005829":null,"GO:0035556":null,"GO:1900237":null,"GO:1902472":null,"GO:1905287":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03309.1"],"transcripts_by_uniquename":{"SJAG_03309.1":null},"uniprot_identifier":"B6K3W5","uniquename":"SJAG_03309"}


id: SJAG_03310
data:
  {"cv_annotations":{"biological_process":[{"annotations":[89685],"is_not":false,"summary":null,"term":"GO:0006086"}],"cellular_component":[{"annotations":[77942],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[77943],"is_not":false,"summary":null,"term":"GO:0004741"}],"mondo":[{"annotations":[88272],"is_not":false,"summary":null,"term":"MONDO:0012120"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03310","UniProtKB/TrEMBL:B6K3W6","EnsemblGenomes-Tr:EEB08173","InterPro:IPR015655","GOA:B6K3W6","InterPro:IPR001932","InterPro:IPR036457"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"}],"genes_by_uniquename":{"HGNC:30263":null,"HGNC:9279":null,"SJAG_03310":null,"SPAC10F6.17c":null,"YOR090C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein phosphatase 2C","id":"PF00481","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":388,"start":118}],"match_end":388,"match_start":118,"name":"PP2C"},{"dbname":"CDD","description":"PP2Cc","id":"cd00143","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":446,"start":104}],"match_end":446,"match_start":104,"name":"PP2Cc"},{"dbname":"PROSITE_PROFILES","description":"PPM-type phosphatase domain profile.","id":"PS51746","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":446,"start":93}],"match_end":446,"match_start":93,"name":"PPM_2"},{"dbname":"SMART","id":"SM00332","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":444,"start":85}],"match_end":444,"match_start":85,"name":"PP2C_4"},{"dbname":"SUPERFAMILY","id":"SSF81606","interpro_description":"PPM-type phosphatase-like domain superfamily","interpro_id":"IPR036457","interpro_name":"PPM-type-like_dom_sf","locations":[{"end":447,"start":104}],"match_end":447,"match_start":104,"name":"PP2C-like"},{"dbname":"GENE3D","id":"G3DSA:3.60.40.10","interpro_description":"PPM-type phosphatase-like domain superfamily","interpro_id":"IPR036457","interpro_name":"PPM-type-like_dom_sf","locations":[{"end":449,"start":67}],"match_end":449,"match_start":67},{"dbname":"PANTHER","id":"PTHR13832","interpro_description":"Protein phosphatase 2C","interpro_id":"IPR015655","interpro_name":"PP2C","locations":[{"end":443,"start":106}],"match_end":443,"match_start":106,"name":"PROTEIN PHOSPHATASE 2C"}],"location":{"chromosome_name":"supercont5.2","end_pos":843561,"start_pos":842209,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":39,"start":24}},{"range":{"end":225,"start":201}}],"name":"ptc5","ortholog_annotations":[{"gene_uniquename":"SJAG_03310","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30263","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03310","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9279","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03310","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC10F6.17c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03310","ortholog_taxonid":4932,"ortholog_uniquename":"YOR090C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03310","ortholog_taxonid":4932,"ortholog_uniquename":"YOR090C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial pyruvate dehydrogenase (lipoamide) phosphatase","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004741"]}},"subset_termids":["MONDO:0005244","GO:0016788","GO:0006790","MONDO:0005066","GO:0005739","GO:0055086","GO:0140096","GO:0004721","GO:0006091","MONDO:0004069","MONDO:0037792"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004741":null,"GO:0005739":null,"GO:0006086":null,"MONDO:0012120":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03310.1"],"transcripts_by_uniquename":{"SJAG_03310.1":null},"uniprot_identifier":"B6K3W6","uniquename":"SJAG_03310"}


id: SJAG_03311
data:
  {"cv_annotations":{"biological_process":[{"annotations":[64339],"is_not":false,"summary":null,"term":"GO:0006488"}],"cellular_component":[{"annotations":[100231],"is_not":false,"summary":null,"term":"GO:0098554"},{"annotations":[100232],"is_not":false,"summary":null,"term":"GO:0043541"}],"molecular_function":[{"annotations":[64340],"is_not":false,"summary":null,"term":"GO:0004577"}],"mondo":[{"annotations":[88715],"is_not":false,"summary":null,"term":"MONDO:0010472"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03311","InterPro:IPR007235","GOA:B6K3W7","UniProtKB/TrEMBL:B6K3W7","EnsemblGenomes-Tr:EEB08174"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"}],"genes_by_uniquename":{"HGNC:30881":null,"SJAG_03311":null,"SPAC56E4.02c":null,"YGL047W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glycosyltransferase family 28 C-terminal domain","id":"PF04101","interpro_description":"Glycosyl transferase, family 28, C-terminal","interpro_id":"IPR007235","interpro_name":"Glyco_trans_28_C","locations":[{"end":160,"start":5}],"match_end":160,"match_start":5,"name":"Glyco_tran_28_C"},{"dbname":"SUPERFAMILY","id":"SSF53756","locations":[{"end":133,"start":36}],"match_end":133,"match_start":36,"name":"UDP-Glycosyltransferase/glycogen phosphorylase"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.2000","locations":[{"end":164,"start":2}],"match_end":164,"match_start":2,"name":"Glycogen Phosphorylase B;"},{"dbname":"PANTHER","id":"PTHR12867","interpro_description":"UDP-N-acetylglucosamine transferase subunit Alg13-like","interpro_id":"IPR039042","interpro_name":"Alg13-like","locations":[{"end":163,"start":4}],"match_end":163,"match_start":4,"name":"GLYCOSYL TRANSFERASE-RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":844304,"start_pos":843807,"strand":"reverse"},"name":"alg13","ortholog_annotations":[{"gene_uniquename":"SJAG_03311","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30881","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03311","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56E4.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03311","ortholog_taxonid":4932,"ortholog_uniquename":"YGL047W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03311","ortholog_taxonid":4932,"ortholog_uniquename":"YGL047W","reference_uniquename":"PMID:26896847"}],"product":"N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase Alg13","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004577"]}},"subset_termids":["GO:0016757","GO:0005789","MONDO:0005066","MONDO:0700092","GO:0006486","MONDO:0002320","GO:0005783","MONDO:0024322","MONDO:0005027"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004577":null,"GO:0006488":null,"GO:0043541":null,"GO:0098554":null,"MONDO:0010472":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03311.1"],"transcripts_by_uniquename":{"SJAG_03311.1":null},"uniprot_identifier":"B6K3W7","uniquename":"SJAG_03311"}


id: SJAG_03312
data:
  {"cv_annotations":{"biological_process":[{"annotations":[78458],"is_not":false,"summary":null,"term":"GO:0009074"},{"annotations":[100238],"is_not":false,"summary":null,"term":"GO:0009094"},{"annotations":[78459],"is_not":false,"summary":null,"term":"GO:0019878"},{"annotations":[78460],"is_not":false,"summary":null,"term":"GO:0006571"}],"cellular_component":[{"annotations":[100235],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100236],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[78461],"is_not":false,"summary":null,"term":"GO:0047536"},{"annotations":[100242],"is_not":false,"summary":null,"term":"GO:0004838"},{"annotations":[66330],"is_not":false,"summary":null,"term":"GO:0030170"}]},"dbxrefs":["InterPro:IPR015421","EnsemblGenomes-Tr:EEB08175","InterPro:IPR004839","GOA:B6K3W8","UniProtKB/TrEMBL:B6K3W8","EnsemblGenomes-Gn:SJAG_03312","InterPro:IPR015424"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":21,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"}],"genes_by_uniquename":{"HGNC:17929":null,"SJAG_03312":null,"SPAC56E4.03":null,"YGL202W":null,"YHR137W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Aminotransferase class I and II","id":"PF00155","interpro_description":"Aminotransferase, class I/classII, large domain","interpro_id":"IPR004839","interpro_name":"Aminotransferase_I/II_large","locations":[{"end":466,"start":130}],"match_end":466,"match_start":130,"name":"Aminotran_1_2"},{"dbname":"CDD","description":"AAT_like","id":"cd00609","locations":[{"end":468,"start":99}],"match_end":468,"match_start":99,"name":"AAT_like"},{"dbname":"FUNFAM","description":"Aromatic amino acid aminotransferase","id":"G3DSA:3.40.640.10:FF:000074","locations":[{"end":475,"start":1}],"match_end":475,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF53383","interpro_description":"Pyridoxal phosphate-dependent transferase","interpro_id":"IPR015424","interpro_name":"PyrdxlP-dep_Trfase","locations":[{"end":472,"start":36}],"match_end":472,"match_start":36,"name":"PLP-dependent transferases"},{"dbname":"GENE3D","id":"G3DSA:3.40.640.10","interpro_description":"Pyridoxal phosphate-dependent transferase, major domain","interpro_id":"IPR015421","interpro_name":"PyrdxlP-dep_Trfase_major","locations":[{"end":475,"start":1}],"match_end":475,"match_start":1},{"dbname":"PANTHER","id":"PTHR42790","interpro_description":"Class-I pyridoxal-phosphate-dependent aminotransferase-like","interpro_id":"IPR050859","interpro_name":"Class-I_PLP-dep_aminotransf","locations":[{"end":474,"start":5}],"match_end":474,"match_start":5,"name":"AMINOTRANSFERASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":21,"start":1}],"match_end":21,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":846637,"start_pos":845210,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_03312","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17929","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03312","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56E4.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03312","ortholog_taxonid":4932,"ortholog_uniquename":"YGL202W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03312","ortholog_taxonid":4932,"ortholog_uniquename":"YHR137W","reference_uniquename":"PMID:29761456"}],"product":"aromatic aminotransferase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030170"],"not-binding":["GO:0004838","GO:0047536"]}},"subset_termids":["GO:0005634","GO:0006520","GO:0016769","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004838":null,"GO:0005634":null,"GO:0005829":null,"GO:0006571":null,"GO:0009074":null,"GO:0009094":null,"GO:0019878":null,"GO:0030170":null,"GO:0047536":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03312.1"],"transcripts_by_uniquename":{"SJAG_03312.1":null},"uniprot_identifier":"B6K3W8","uniquename":"SJAG_03312"}


id: SJAG_03313
data:
  {"cv_annotations":{"biological_process":[{"annotations":[79156],"is_not":false,"summary":null,"term":"GO:0006633"},{"annotations":[67273],"is_not":false,"summary":null,"term":"GO:2001295"},{"annotations":[100248],"is_not":false,"summary":null,"term":"GO:0101026"}],"cellular_component":[{"annotations":[100244],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[79155],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[79154],"is_not":false,"summary":null,"term":"GO:0003989"},{"annotations":[67265],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[67271],"is_not":false,"summary":null,"term":"GO:0004075"},{"annotations":[67267],"is_not":false,"summary":null,"term":"GO:0046872"}],"mondo":[{"annotations":[88569],"is_not":false,"summary":null,"term":"MONDO:0013493"}]},"dbxrefs":["InterPro:IPR000089","InterPro:IPR011764","InterPro:IPR013537","InterPro:IPR011053","InterPro:IPR011761","InterPro:IPR001882","InterPro:IPR011762","InterPro:IPR034733","InterPro:IPR011763","InterPro:IPR005479","UniProtKB/TrEMBL:B6K3W9","InterPro:IPR011054","InterPro:IPR005481","EnsemblGenomes-Gn:SJAG_03313","GOA:B6K3W9","InterPro:IPR005482","InterPro:IPR013815","InterPro:IPR029045","EnsemblGenomes-Tr:EEB08176","InterPro:IPR016185"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"}],"genes_by_uniquename":{"HGNC:84":null,"HGNC:85":null,"SJAG_03313":null,"SPAC56E4.04c":null,"YMR207C":null,"YNR016C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Biotin carboxylase, N-terminal domain","id":"PF00289","interpro_description":"Biotin carboxylase-like, N-terminal domain","interpro_id":"IPR005481","interpro_name":"BC-like_N","locations":[{"end":208,"start":87}],"match_end":208,"match_start":87,"name":"Biotin_carb_N"},{"dbname":"PFAM","description":"Carboxyl transferase domain","id":"PF01039","interpro_description":"Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta","interpro_id":"IPR034733","interpro_name":"AcCoA_carboxyl_beta","locations":[{"end":2180,"start":1626}],"match_end":2180,"match_start":1626,"name":"Carboxyl_trans"},{"dbname":"PFAM","description":"Acetyl-CoA carboxylase, BT domain","id":"PF21385","interpro_description":"Acetyl-CoA carboxylase, BT domain","interpro_id":"IPR049074","interpro_name":"ACCA_BT","locations":[{"end":723,"start":604}],"match_end":723,"match_start":604,"name":"ACCA_BT"},{"dbname":"PFAM","description":"Biotin carboxylase C-terminal domain","id":"PF02785","interpro_description":"Biotin carboxylase, C-terminal","interpro_id":"IPR005482","interpro_name":"Biotin_COase_C","locations":[{"end":591,"start":485}],"match_end":591,"match_start":485,"name":"Biotin_carb_C"},{"dbname":"PFAM","description":"Biotin-requiring enzyme","id":"PF00364","interpro_description":"Biotin/lipoyl attachment","interpro_id":"IPR000089","interpro_name":"Biotin_lipoyl","locations":[{"end":794,"start":730}],"match_end":794,"match_start":730,"name":"Biotin_lipoyl"},{"dbname":"PFAM","description":"Carbamoyl-phosphate synthase L chain, ATP binding domain","id":"PF02786","interpro_description":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_id":"IPR005479","interpro_name":"CbamoylP_synth_lsu-like_ATP-bd","locations":[{"end":441,"start":257}],"match_end":441,"match_start":257,"name":"CPSase_L_D2"},{"dbname":"PFAM","description":"Acetyl-CoA carboxylase, central region","id":"PF08326","interpro_description":"Acetyl-CoA carboxylase, central domain","interpro_id":"IPR013537","interpro_name":"AcCoA_COase_cen","locations":[{"end":1530,"start":796}],"match_end":1530,"match_start":796,"name":"ACC_central"},{"dbname":"CDD","description":"biotinyl_domain","id":"cd06850","locations":[{"end":795,"start":730}],"match_end":795,"match_start":730,"name":"biotinyl_domain"},{"dbname":"PROSITE_PATTERNS","description":"Carbamoyl-phosphate synthase subdomain signature 1.","id":"PS00866","interpro_description":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_id":"IPR005479","interpro_name":"CbamoylP_synth_lsu-like_ATP-bd","locations":[{"end":289,"start":275}],"match_end":289,"match_start":275,"name":"CPSASE_1"},{"dbname":"PROSITE_PATTERNS","description":"Carbamoyl-phosphate synthase subdomain signature 2.","id":"PS00867","interpro_description":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_id":"IPR005479","interpro_name":"CbamoylP_synth_lsu-like_ATP-bd","locations":[{"end":412,"start":405}],"match_end":412,"match_start":405,"name":"CPSASE_2"},{"dbname":"PROSITE_PATTERNS","description":"Biotin-requiring enzymes attachment site.","id":"PS00188","interpro_description":"Biotin-binding site","interpro_id":"IPR001882","interpro_name":"Biotin_BS","locations":[{"end":770,"start":753}],"match_end":770,"match_start":753,"name":"BIOTIN"},{"dbname":"PROSITE_PROFILES","description":"Biotinyl/lipoyl domain profile.","id":"PS50968","interpro_description":"Biotin/lipoyl attachment","interpro_id":"IPR000089","interpro_name":"Biotin_lipoyl","locations":[{"end":796,"start":722}],"match_end":796,"match_start":722,"name":"BIOTINYL_LIPOYL"},{"dbname":"PROSITE_PROFILES","description":"Biotin carboxylation domain profile.","id":"PS50979","interpro_description":"Biotin carboxylation domain","interpro_id":"IPR011764","interpro_name":"Biotin_carboxylation_dom","locations":[{"end":595,"start":86}],"match_end":595,"match_start":86,"name":"BC"},{"dbname":"PROSITE_PROFILES","description":"ATP-grasp fold profile.","id":"PS50975","interpro_description":"ATP-grasp fold","interpro_id":"IPR011761","interpro_name":"ATP-grasp","locations":[{"end":436,"start":244}],"match_end":436,"match_start":244,"name":"ATP_GRASP"},{"dbname":"PROSITE_PROFILES","description":"Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile.","id":"PS50989","interpro_description":"Acetyl-coenzyme A carboxyltransferase, C-terminal","interpro_id":"IPR011763","interpro_name":"COA_CT_C","locations":[{"end":2191,"start":1877}],"match_end":2191,"match_start":1877,"name":"COA_CT_CTER"},{"dbname":"PROSITE_PROFILES","description":"Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile.","id":"PS50980","interpro_description":"Acetyl-coenzyme A carboxyltransferase, N-terminal","interpro_id":"IPR011762","interpro_name":"COA_CT_N","locations":[{"end":1873,"start":1537}],"match_end":1873,"match_start":1537,"name":"COA_CT_NTER"},{"dbname":"SMART","id":"SM00878","interpro_description":"Biotin carboxylase, C-terminal","interpro_id":"IPR005482","interpro_name":"Biotin_COase_C","locations":[{"end":591,"start":484}],"match_end":591,"match_start":484,"name":"Biotin_carb_C_2"},{"dbname":"FUNFAM","description":"Acetyl-CoA carboxylase 1","id":"G3DSA:2.40.460.10:FF:000001","locations":[{"end":1749,"start":1682}],"match_end":1749,"match_start":1682},{"dbname":"FUNFAM","description":"acetyl-CoA carboxylase isoform X2","id":"G3DSA:3.40.50.20:FF:000005","locations":[{"end":213,"start":63}],"match_end":213,"match_start":63},{"dbname":"FUNFAM","description":"Acetyl-CoA carboxylase 1","id":"G3DSA:2.40.50.100:FF:000005","locations":[{"end":797,"start":726}],"match_end":797,"match_start":726},{"dbname":"FUNFAM","description":"acetyl-CoA carboxylase isoform X1","id":"G3DSA:3.30.1490.20:FF:000003","locations":[{"end":320,"start":236}],"match_end":320,"match_start":236},{"dbname":"FUNFAM","description":"acetyl-CoA carboxylase 1","id":"G3DSA:3.90.1770.10:FF:000001","locations":[{"end":258,"start":214}],"match_end":258,"match_start":214},{"dbname":"FUNFAM","description":"acetyl-CoA carboxylase isoform X2","id":"G3DSA:3.90.226.10:FF:000010","locations":[{"end":2263,"start":1866}],"match_end":2263,"match_start":1866},{"dbname":"FUNFAM","description":"Acetyl-CoA carboxylase 1","id":"G3DSA:3.30.470.20:FF:000005","locations":[{"end":577,"start":322}],"match_end":577,"match_start":322},{"dbname":"SUPERFAMILY","id":"SSF52096","interpro_description":"ClpP/crotonase-like domain superfamily","interpro_id":"IPR029045","interpro_name":"ClpP/crotonase-like_dom_sf","locations":[{"end":2252,"start":1538}],"match_end":2252,"match_start":1538,"name":"ClpP/crotonase"},{"dbname":"SUPERFAMILY","id":"SSF56059","locations":[{"end":471,"start":212}],"match_end":471,"match_start":212,"name":"Glutathione synthetase ATP-binding domain-like"},{"dbname":"SUPERFAMILY","id":"SSF52440","interpro_description":"Pre-ATP-grasp domain superfamily","interpro_id":"IPR016185","interpro_name":"PreATP-grasp_dom_sf","locations":[{"end":211,"start":71}],"match_end":211,"match_start":71,"name":"PreATP-grasp domain"},{"dbname":"SUPERFAMILY","id":"SSF51230","interpro_description":"Single hybrid motif","interpro_id":"IPR011053","interpro_name":"Single_hybrid_motif","locations":[{"end":795,"start":722}],"match_end":795,"match_start":722,"name":"Single hybrid motif"},{"dbname":"SUPERFAMILY","id":"SSF51246","interpro_description":"Rudiment single hybrid motif","interpro_id":"IPR011054","interpro_name":"Rudment_hybrid_motif","locations":[{"end":595,"start":478}],"match_end":595,"match_start":478,"name":"Rudiment single hybrid motif"},{"dbname":"GENE3D","id":"G3DSA:3.30.1490.20","interpro_description":"ATP-grasp fold, subdomain 1","interpro_id":"IPR013815","interpro_name":"ATP_grasp_subdomain_1","locations":[{"end":321,"start":259}],"match_end":321,"match_start":259},{"dbname":"GENE3D","id":"G3DSA:2.40.50.100","locations":[{"end":797,"start":726}],"match_end":797,"match_start":726},{"dbname":"GENE3D","id":"G3DSA:2.40.460.10","locations":[{"end":1749,"start":1682}],"match_end":1749,"match_start":1682,"name":"Biotin dependent carboxylase carboxyltransferase"},{"dbname":"GENE3D","id":"G3DSA:3.90.226.10","locations":[{"end":1681,"start":1537},{"end":1862,"start":1750},{"end":2262,"start":1866}],"match_end":2262,"match_start":1537},{"dbname":"GENE3D","id":"G3DSA:3.40.50.20","locations":[{"end":213,"start":54}],"match_end":213,"match_start":54},{"dbname":"GENE3D","id":"G3DSA:3.30.470.20","locations":[{"end":577,"start":322}],"match_end":577,"match_start":322},{"dbname":"GENE3D","id":"G3DSA:3.90.1770.10","locations":[{"end":258,"start":214}],"match_end":258,"match_start":214},{"dbname":"PANTHER","id":"PTHR45728","interpro_description":"Acetyl-CoA carboxylase","interpro_id":"IPR049076","interpro_name":"ACCA","locations":[{"end":2286,"start":62}],"match_end":2286,"match_start":62,"name":"ACETYL-COA CARBOXYLASE, ISOFORM A"}],"location":{"chromosome_name":"supercont5.2","end_pos":854150,"start_pos":847281,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":26,"start":15}},{"range":{"end":35,"start":30}},{"range":{"end":1143,"start":1125}},{"range":{"end":1183,"start":1170}},{"range":{"end":2179,"start":2168}}],"name":"cut6","ortholog_annotations":[{"gene_uniquename":"SJAG_03313","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:84","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03313","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:85","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03313","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56E4.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03313","ortholog_taxonid":4932,"ortholog_uniquename":"YMR207C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03313","ortholog_taxonid":4932,"ortholog_uniquename":"YNR016C","reference_uniquename":"PMID:29761456"}],"product":"acetyl-CoA/biotin carboxylase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0046872"],"not-binding":["GO:0003989","GO:0004075"]}},"subset_termids":["GO:0006790","GO:0055086","GO:0005739","GO:0061024","GO:0016874","GO:0005829","GO:0006629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003989":null,"GO:0004075":null,"GO:0005524":null,"GO:0005739":null,"GO:0005829":null,"GO:0006633":null,"GO:0046872":null,"GO:0101026":null,"GO:2001295":null,"MONDO:0013493":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03313.1"],"transcripts_by_uniquename":{"SJAG_03313.1":null},"uniprot_identifier":"B6K3W9","uniquename":"SJAG_03313"}


id: SJAG_03315
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100255],"is_not":false,"summary":null,"term":"GO:0045048"},{"annotations":[100256],"is_not":false,"summary":null,"term":"GO:0045047"}],"cellular_component":[{"annotations":[100254],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[66356],"is_not":false,"summary":null,"term":"GO:0005773"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08177","InterPro:IPR008506","UniProtKB/TrEMBL:B6K3X0","GOA:B6K3X0","EnsemblGenomes-Gn:SJAG_03315"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":179,"start":149}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"}],"genes_by_uniquename":{"HGNC:25015":null,"SJAG_03315":null,"SPAC56E4.05":null,"YLR065C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SRP-independent targeting protein 2/TMEM208","id":"PF05620","interpro_description":"SRP-independent targeting protein 2/TMEM208","interpro_id":"IPR008506","interpro_name":"SND2/TMEM208","locations":[{"end":175,"start":1}],"match_end":175,"match_start":1,"name":"TMEM208_SND2"},{"dbname":"PANTHER","id":"PTHR13505","interpro_description":"SRP-independent targeting protein 2/TMEM208","interpro_id":"IPR008506","interpro_name":"SND2/TMEM208","locations":[{"end":178,"start":1}],"match_end":178,"match_start":1,"name":"TRANSMEMBRANE PROTEIN 208"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":179,"start":149}],"match_end":179,"match_start":149,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":179,"start":166}],"match_end":179,"match_start":166,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":856236,"start_pos":855613,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":120,"start":104}},{"range":{"end":178,"start":164}}],"name":"snd2","ortholog_annotations":[{"gene_uniquename":"SJAG_03315","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25015","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03315","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56E4.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03315","ortholog_taxonid":4932,"ortholog_uniquename":"YLR065C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03315","ortholog_taxonid":4932,"ortholog_uniquename":"YLR065C","reference_uniquename":"PMID:26896847"}],"product":"SRP-independent ER targeting protein Snd2","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005783","GO:0005773","GO:0005789","GO:0061024","GO:0006605"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005773":null,"GO:0005789":null,"GO:0045047":null,"GO:0045048":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":38,"start":21}},{"assigned_by":"TMHMM","range":{"end":108,"start":86}},{"assigned_by":"TMHMM","range":{"end":134,"start":115}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03315.1"],"transcripts_by_uniquename":{"SJAG_03315.1":null},"uniprot_identifier":"B6K3X0","uniquename":"SJAG_03315"}


id: SJAG_03316
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":411,"start":411}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"L-glutamate","range":{"end":141,"start":141}},{"assigned_by":"UniProtKB","ligand":"L-glutamate","range":{"end":431,"start":429}},{"assigned_by":"UniProtKB","ligand":"L-glutamate","range":{"end":453,"start":453}},{"assigned_by":"UniProtKB","ligand":"L-glutamate","range":{"end":482,"start":481}},{"assigned_by":"UniProtKB","ligand":"L-glutamate","range":{"end":505,"start":505}}],"cv_annotations":{"biological_process":[{"annotations":[100259],"is_not":false,"summary":null,"term":"GO:1990748"},{"annotations":[75537],"is_not":false,"summary":null,"term":"GO:0006751"}],"cellular_component":[{"annotations":[62257],"is_not":false,"summary":null,"term":"GO:0012505"},{"annotations":[75534],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[75535],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[75536],"is_not":false,"summary":null,"term":"GO:0036374"}],"mondo":[{"annotations":[88061],"is_not":false,"summary":null,"term":"MONDO:0009285"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08178","InterPro:IPR000101","UniProtKB/TrEMBL:B6K3X1","GOA:B6K3X1","EnsemblGenomes-Gn:SJAG_03316","InterPro:IPR029055"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"}],"genes_by_uniquename":{"HGNC:16437":null,"HGNC:18596":null,"HGNC:33426":null,"HGNC:4250":null,"HGNC:4252":null,"HGNC:4260":null,"SJAG_03316":null,"SPAC56E4.06c":null,"YLR299W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Gamma-glutamyltranspeptidase","id":"PF01019","locations":[{"end":596,"start":91}],"match_end":596,"match_start":91,"name":"G_glu_transpept"},{"dbname":"PRINTS","description":"Gamma-glutamyltranspeptidase signature","id":"PR01210","locations":[{"end":123,"start":98},{"end":203,"start":166},{"end":299,"start":283},{"end":331,"start":312},{"end":429,"start":411},{"end":453,"start":435},{"end":490,"start":475},{"end":518,"start":501}],"match_end":518,"match_start":98,"name":"GGTRANSPTASE"},{"dbname":"FUNFAM","description":"Gamma-glutamyltransferase 5 isoform 1","id":"G3DSA:1.10.246.130:FF:000001","locations":[{"end":403,"start":299}],"match_end":403,"match_start":299},{"dbname":"FUNFAM","description":"Gamma-glutamyltranspeptidase 1","id":"G3DSA:3.60.20.40:FF:000001","locations":[{"end":601,"start":405}],"match_end":601,"match_start":405},{"dbname":"SUPERFAMILY","id":"SSF56235","interpro_description":"Nucleophile aminohydrolases, N-terminal","interpro_id":"IPR029055","interpro_name":"Ntn_hydrolases_N","locations":[{"end":600,"start":71}],"match_end":600,"match_start":71,"name":"N-terminal nucleophile aminohydrolases (Ntn hydrolases)"},{"dbname":"GENE3D","id":"G3DSA:1.10.246.130","interpro_description":"Gamma-glutamyltranspeptidase, large subunit, C-terminal domain","interpro_id":"IPR043138","interpro_name":"GGT_lsub_C","locations":[{"end":403,"start":299}],"match_end":403,"match_start":299},{"dbname":"GENE3D","id":"G3DSA:3.60.20.40","interpro_description":"Gamma-glutamyltranspeptidase, small subunit","interpro_id":"IPR043137","interpro_name":"GGT_ssub","locations":[{"end":600,"start":405}],"match_end":600,"match_start":405},{"dbname":"PANTHER","id":"PTHR11686","interpro_description":"Gamma-glutamyltranspeptidase","interpro_id":"IPR000101","interpro_name":"GGT_peptidase","locations":[{"end":600,"start":50}],"match_end":600,"match_start":50,"name":"GAMMA GLUTAMYL TRANSPEPTIDASE"},{"dbname":"NCBIFAM","description":"gamma-glutamyltransferase","id":"TIGR00066","interpro_description":"Gamma-glutamyltranspeptidase","interpro_id":"IPR000101","interpro_name":"GGT_peptidase","locations":[{"end":593,"start":83}],"match_end":593,"match_start":83,"name":"g_glut_trans"}],"location":{"chromosome_name":"supercont5.2","end_pos":858320,"start_pos":856515,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":56,"start":46}},{"range":{"end":71,"start":62}},{"range":{"end":124,"start":114}}],"name":"ggt2","ortholog_annotations":[{"gene_uniquename":"SJAG_03316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16437","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18596","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:33426","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4250","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4252","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4260","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56E4.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":4932,"ortholog_uniquename":"YLR299W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":4932,"ortholog_uniquename":"YLR299W","reference_uniquename":"PMID:26896847"}],"product":"gamma-glutamyltranspeptidase Ggt2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0036374"]}},"subset_termids":["GO:0008233","GO:0006790","MONDO:0019241","MONDO:0005066","GO:0098754","GO:0140096","GO:0005886","GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000324":null,"GO:0005886":null,"GO:0006751":null,"GO:0012505":null,"GO:0036374":null,"GO:1990748":null,"MONDO:0009285":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":57,"start":38}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03316.1"],"transcripts_by_uniquename":{"SJAG_03316.1":null},"uniprot_identifier":"B6K3X1","uniquename":"SJAG_03316"}


id: SJAG_03318
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[100262],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[100263],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[66639],"is_not":false,"summary":null,"term":"GO:0016747"}]},"dbxrefs":["InterPro:IPR000182","GOA:B6K3X2","EnsemblGenomes-Gn:SJAG_03318","EnsemblGenomes-Tr:EEB08179","UniProtKB/TrEMBL:B6K3X2","InterPro:IPR016181"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"}],"genes_by_uniquename":{"SJAG_03318":null,"SPAC56E4.07":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Acetyltransferase (GNAT) domain","id":"PF13673","interpro_description":"GNAT domain","interpro_id":"IPR000182","interpro_name":"GNAT_dom","locations":[{"end":210,"start":145}],"match_end":210,"match_start":145,"name":"Acetyltransf_10"},{"dbname":"CDD","description":"NAT_SF","id":"cd04301","locations":[{"end":190,"start":148}],"match_end":190,"match_start":148,"name":"NAT_SF"},{"dbname":"SUPERFAMILY","id":"SSF55729","interpro_description":"Acyl-CoA N-acyltransferase","interpro_id":"IPR016181","interpro_name":"Acyl_CoA_acyltransferase","locations":[{"end":102,"start":14},{"end":211,"start":145}],"match_end":211,"match_start":14,"name":"Acyl-CoA N-acyltransferases (Nat)"},{"dbname":"GENE3D","id":"G3DSA:3.40.630.30","locations":[{"end":236,"start":13}],"match_end":236,"match_start":13},{"dbname":"PANTHER","id":"PTHR42791","interpro_description":"Trichothecene Biosynthesis Acetyltransferases","interpro_id":"IPR052523","interpro_name":"Trichothecene_AcTrans","locations":[{"end":218,"start":14}],"match_end":218,"match_start":14,"name":"GNAT FAMILY ACETYLTRANSFERASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":860869,"start_pos":860144,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_03318","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56E4.07","reference_uniquename":"PMID:21511999"}],"product":"N-acetyltransferase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016747"]}},"subset_termids":["GO:0005783","GO:0016746","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005794":null,"GO:0016747":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":122,"start":105}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03318.1"],"transcripts_by_uniquename":{"SJAG_03318.1":null},"uniprot_identifier":"B6K3X2","uniquename":"SJAG_03318"}


id: SJAG_03319
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90678],"is_not":false,"summary":null,"term":"GO:0034605"},{"annotations":[72288],"is_not":false,"summary":null,"term":"GO:0031930"},{"annotations":[72290],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[72289],"is_not":false,"summary":null,"term":"GO:0006808"}],"cellular_component":[{"annotations":[90677],"is_not":false,"summary":null,"term":"GO:0005829"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3X3","InterPro:IPR021711","EnsemblGenomes-Gn:SJAG_03319","InterPro:IPR013860","EnsemblGenomes-Tr:EEB08180"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":202,"start":177}},{"range":{"end":381,"start":323}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"}],"genes_by_uniquename":{"SJAG_03319":null,"SPAC1420.01c":null,"YNL076W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nitrogen regulatory protein areA, GATA-like domain","id":"PF08550","interpro_description":"Nitrogen regulatory protein areA, GATA-like domain","interpro_id":"IPR013860","interpro_name":"AreA_GATA","locations":[{"end":60,"start":33}],"match_end":60,"match_start":33,"name":"GATA_AreA"},{"dbname":"PFAM","description":"Protein of unknown function (DUF3295)","id":"PF11702","interpro_description":"Domain of unknown function DUF3295","interpro_id":"IPR021711","interpro_name":"DUF3295","locations":[{"end":508,"start":332}],"match_end":508,"match_start":332,"name":"DUF3295"},{"dbname":"PANTHER","id":"PTHR28014","interpro_description":"Ras-cAMP pathway regulatory protein","interpro_id":"IPR053043","interpro_name":"Ras-cAMP_regulatory","locations":[{"end":517,"start":200}],"match_end":517,"match_start":200,"name":"NEGATIVE REGULATOR OF RAS-CAMP PATHWAY"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":202,"start":177},{"end":381,"start":323}],"match_end":381,"match_start":177,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":349,"start":339}],"match_end":349,"match_start":339,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":863158,"start_pos":861513,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":125,"start":112}},{"range":{"end":144,"start":129}},{"range":{"end":272,"start":262}},{"range":{"end":348,"start":338}}],"name":"mks1","ortholog_annotations":[{"gene_uniquename":"SJAG_03319","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1420.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03319","ortholog_taxonid":4932,"ortholog_uniquename":"YNL076W","reference_uniquename":"PMID:29761456"}],"product":"GATA-like domain protein","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0006355","GO:0023052","GO:0006351","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0005829":null,"GO:0006808":null,"GO:0031930":null,"GO:0034605":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03319.1"],"transcripts_by_uniquename":{"SJAG_03319.1":null},"uniprot_identifier":"B6K3X3","uniquename":"SJAG_03319"}


id: SJAG_03320
data:
  {"cv_annotations":{"biological_process":[{"annotations":[81609],"is_not":false,"summary":null,"term":"GO:0006457"}],"cellular_component":[{"annotations":[81608],"is_not":false,"summary":null,"term":"GO:0005832"},{"annotations":[90684],"is_not":false,"summary":null,"term":"GO:0005856"}],"molecular_function":[{"annotations":[70669],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[70668],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[70667],"is_not":false,"summary":null,"term":"GO:0140662"},{"annotations":[81610],"is_not":false,"summary":null,"term":"GO:0051082"}],"mondo":[{"annotations":[87487],"is_not":false,"summary":null,"term":"MONDO:0009748"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08181","InterPro:IPR017998","InterPro:IPR027409","InterPro:IPR027410","EnsemblGenomes-Gn:SJAG_03320","InterPro:IPR027413","InterPro:IPR002423","UniProtKB/TrEMBL:B6K3X4","GOA:B6K3X4","InterPro:IPR002194"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"}],"genes_by_uniquename":{"HGNC:1618":null,"SJAG_03320":null,"SPAC1420.02c":null,"YJR064W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"TCP-1/cpn60 chaperonin family","id":"PF00118","interpro_description":"Chaperonin Cpn60/GroEL/TCP-1 family","interpro_id":"IPR002423","interpro_name":"Cpn60/GroEL/TCP-1","locations":[{"end":541,"start":49}],"match_end":541,"match_start":49,"name":"Cpn60_TCP1"},{"dbname":"CDD","description":"TCP1_epsilon","id":"cd03339","interpro_description":"T-complex protein 1, epsilon subunit","interpro_id":"IPR012718","interpro_name":"Chap_CCT_epsi","locations":[{"end":540,"start":15}],"match_end":540,"match_start":15,"name":"TCP1_epsilon"},{"dbname":"PROSITE_PATTERNS","description":"Chaperonins TCP-1 signature 1.","id":"PS00750","interpro_description":"Chaperonin TCP-1, conserved site","interpro_id":"IPR002194","interpro_name":"Chaperonin_TCP-1_CS","locations":[{"end":66,"start":54}],"match_end":66,"match_start":54,"name":"TCP1_1"},{"dbname":"PROSITE_PATTERNS","description":"Chaperonins TCP-1 signature 2.","id":"PS00751","interpro_description":"Chaperonin TCP-1, conserved site","interpro_id":"IPR002194","interpro_name":"Chaperonin_TCP-1_CS","locations":[{"end":91,"start":75}],"match_end":91,"match_start":75,"name":"TCP1_2"},{"dbname":"PROSITE_PATTERNS","description":"Chaperonins TCP-1 signature 3.","id":"PS00995","interpro_description":"Chaperonin TCP-1, conserved site","interpro_id":"IPR002194","interpro_name":"Chaperonin_TCP-1_CS","locations":[{"end":111,"start":103}],"match_end":111,"match_start":103,"name":"TCP1_3"},{"dbname":"PRINTS","description":"Tailless complex polypeptide 1 (chaperone) signature","id":"PR00304","interpro_description":"Chaperone tailless complex polypeptide 1 (TCP-1)","interpro_id":"IPR017998","interpro_name":"Chaperone_TCP-1","locations":[{"end":67,"start":51},{"end":91,"start":73},{"end":122,"start":103},{"end":411,"start":389},{"end":435,"start":423}],"match_end":435,"match_start":51,"name":"TCOMPLEXTCP1"},{"dbname":"FUNFAM","description":"T-complex protein 1 subunit delta","id":"G3DSA:1.10.560.10:FF:000053","locations":[{"end":159,"start":42}],"match_end":159,"match_start":42},{"dbname":"FUNFAM","description":"T-complex protein 1 subunit epsilon","id":"G3DSA:3.50.7.10:FF:000003","locations":[{"end":385,"start":231}],"match_end":385,"match_start":231},{"dbname":"FUNFAM","description":"T-complex protein 1 subunitTheta, putative","id":"G3DSA:1.10.560.10:FF:000049","locations":[{"end":539,"start":422}],"match_end":539,"match_start":422},{"dbname":"SUPERFAMILY","id":"SSF48592","interpro_description":"GroEL-like equatorial domain superfamily","interpro_id":"IPR027413","interpro_name":"GROEL-like_equatorial_sf","locations":[{"end":160,"start":30},{"end":540,"start":421}],"match_end":540,"match_start":30,"name":"GroEL equatorial domain-like"},{"dbname":"SUPERFAMILY","id":"SSF52029","interpro_description":"GroEL-like apical domain superfamily","interpro_id":"IPR027409","interpro_name":"GroEL-like_apical_dom_sf","locations":[{"end":394,"start":226}],"match_end":394,"match_start":226,"name":"GroEL apical domain-like"},{"dbname":"SUPERFAMILY","id":"SSF54849","interpro_description":"TCP-1-like chaperonin intermediate domain superfamily","interpro_id":"IPR027410","interpro_name":"TCP-1-like_intermed_sf","locations":[{"end":230,"start":166},{"end":420,"start":384}],"match_end":420,"match_start":166,"name":"GroEL-intermediate domain like"},{"dbname":"GENE3D","id":"G3DSA:1.10.560.10","interpro_description":"GroEL-like equatorial domain superfamily","interpro_id":"IPR027413","interpro_name":"GROEL-like_equatorial_sf","locations":[{"end":158,"start":46},{"end":539,"start":422}],"match_end":539,"match_start":46},{"dbname":"GENE3D","id":"G3DSA:3.50.7.10","interpro_description":"GroEL-like apical domain superfamily","interpro_id":"IPR027409","interpro_name":"GroEL-like_apical_dom_sf","locations":[{"end":385,"start":231}],"match_end":385,"match_start":231,"name":"GroEL"},{"dbname":"GENE3D","id":"G3DSA:3.30.260.10","interpro_description":"TCP-1-like chaperonin intermediate domain superfamily","interpro_id":"IPR027410","interpro_name":"TCP-1-like_intermed_sf","locations":[{"end":230,"start":159},{"end":421,"start":386}],"match_end":421,"match_start":159},{"dbname":"PANTHER","id":"PTHR11353","interpro_description":"Chaperone tailless complex polypeptide 1 (TCP-1)","interpro_id":"IPR017998","interpro_name":"Chaperone_TCP-1","locations":[{"end":541,"start":35}],"match_end":541,"match_start":35,"name":"CHAPERONIN"},{"dbname":"NCBIFAM","description":"thermosome subunit alpha","id":"NF041082","interpro_description":"Thermosome subunit alpha","interpro_id":"IPR054827","interpro_name":"thermosome_alpha","locations":[{"end":541,"start":28}],"match_end":541,"match_start":28,"name":"thermosome_alpha"},{"dbname":"NCBIFAM","description":"thermosome subunit beta","id":"NF041083","interpro_description":"TCP-1 chaperonin-containing T-complex","interpro_id":"IPR053374","interpro_name":"TCP-1_chaperonin","locations":[{"end":541,"start":28}],"match_end":541,"match_start":28,"name":"thermosome_beta"},{"dbname":"NCBIFAM","description":"T-complex protein 1 subunit epsilon","id":"TIGR02343","interpro_description":"T-complex protein 1, epsilon subunit","interpro_id":"IPR012718","interpro_name":"Chap_CCT_epsi","locations":[{"end":540,"start":12}],"match_end":540,"match_start":12,"name":"chap_CCT_epsi"}],"location":{"chromosome_name":"supercont5.2","end_pos":865572,"start_pos":863824,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":124,"start":109}}],"name":"cct5","ortholog_annotations":[{"gene_uniquename":"SJAG_03320","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1618","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03320","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1420.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03320","ortholog_taxonid":4932,"ortholog_uniquename":"YJR064W","reference_uniquename":"PMID:29761456"}],"product":"chaperonin-containing T-complex epsilon subunit Cct5","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051082","GO:0005524"],"not-binding":["GO:0016887","GO:0140662"]}},"subset_termids":["GO:0006457","MONDO:0005244","MONDO:0005559","GO:0016887","GO:0005829","GO:0051082","GO:0051604"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005832":null,"GO:0005856":null,"GO:0006457":null,"GO:0016887":null,"GO:0051082":null,"GO:0140662":null,"MONDO:0009748":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03320.1"],"transcripts_by_uniquename":{"SJAG_03320.1":null},"uniprot_identifier":"B6K3X4","uniquename":"SJAG_03320"}


id: SJAG_03321
data:
  {"coiled_coil_coords":[{"range":{"end":109,"start":89}},{"range":{"end":174,"start":154}}],"cv_annotations":{"biological_process":[{"annotations":[103568],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[90689],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90690],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[61946],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[61947],"is_not":false,"summary":null,"term":"GO:0008541"}],"mondo":[{"annotations":[87353],"is_not":false,"summary":null,"term":"MONDO:0054591"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08182","InterPro:IPR036390","InterPro:IPR035297","InterPro:IPR040896","EnsemblGenomes-Gn:SJAG_03321","GOA:B6K3X5","InterPro:IPR036388","InterPro:IPR040134","InterPro:IPR000717","UniProtKB/TrEMBL:B6K3X5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"}],"genes_by_uniquename":{"HGNC:9557":null,"SJAG_03321":null,"SPAC1420.03":null,"SPAPB8E5.02c":null,"YDL147W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PCI domain","id":"PF01399","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":420,"start":352}],"match_end":420,"match_start":352,"name":"PCI"},{"dbname":"PFAM","description":"26S proteasome regulatory subunit RPN5 C-terminal domain","id":"PF18098","interpro_description":"26S proteasome regulatory subunit RPN5, C-terminal domain","interpro_id":"IPR040896","interpro_name":"RPN5_C","locations":[{"end":457,"start":428}],"match_end":457,"match_start":428,"name":"RPN5_C"},{"dbname":"PFAM","description":"PSMD12/CSN4, N-terminal","id":"PF22241","interpro_description":"PSMD12/CSN4-like, N-terminal","interpro_id":"IPR054559","interpro_name":"PSMD12-CSN4-like_N","locations":[{"end":268,"start":52}],"match_end":268,"match_start":52,"name":"PSMD12-CSN4_N"},{"dbname":"PROSITE_PROFILES","description":"PCI domain profile.","id":"PS50250","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":423,"start":251}],"match_end":423,"match_start":251,"name":"PCI"},{"dbname":"SMART","description":"motif in proteasome subunits, Int-6, Nip-1 and TRIP-15","id":"SM00088","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":438,"start":352}],"match_end":438,"match_start":352,"name":"PINT"},{"dbname":"FUNFAM","description":"26S proteasome non-ATPase regulatory subunit 12","id":"G3DSA:1.10.10.10:FF:000070","locations":[{"end":427,"start":348}],"match_end":427,"match_start":348},{"dbname":"SUPERFAMILY","id":"SSF46785","interpro_description":"Winged helix DNA-binding domain superfamily","interpro_id":"IPR036390","interpro_name":"WH_DNA-bd_sf","locations":[{"end":428,"start":347}],"match_end":428,"match_start":347,"name":"\"Winged helix\" DNA-binding domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.10","interpro_description":"Winged helix-like DNA-binding domain superfamily","interpro_id":"IPR036388","interpro_name":"WH-like_DNA-bd_sf","locations":[{"end":427,"start":347}],"match_end":427,"match_start":347},{"dbname":"PANTHER","id":"PTHR10855","interpro_description":"26S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4","interpro_id":"IPR040134","interpro_name":"PSMD12/CSN4","locations":[{"end":455,"start":28}],"match_end":455,"match_start":28,"name":"26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4"},{"dbname":"COILS","id":"Coil","locations":[{"end":109,"start":89},{"end":174,"start":154}],"match_end":174,"match_start":89,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":867498,"start_pos":866055,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":133,"start":120}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9557","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9557","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03321","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1420.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03321","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB8E5.02c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03321","ortholog_taxonid":4932,"ortholog_uniquename":"YDL147W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03321","ortholog_taxonid":4932,"ortholog_uniquename":"YDL147W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03321","ortholog_taxonid":4932,"ortholog_uniquename":"YDL147W","reference_uniquename":"PMID:26896847"}],"product":"19S proteasome regulatory subunit Rpn5","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0034399","GO:0005829","GO:0005634","GO:0030163","MONDO:0700092"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005635":null,"GO:0005829":null,"GO:0008541":null,"GO:0034399":null,"GO:0043161":null,"MONDO:0054591":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03321.1"],"transcripts_by_uniquename":{"SJAG_03321.1":null},"uniprot_identifier":"B6K3X5","uniquename":"SJAG_03321"}


id: SJAG_03322
data:
  {"cv_annotations":{"biological_process":[{"annotations":[93512],"is_not":false,"summary":null,"term":"GO:0033617"},{"annotations":[93513],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[81325],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[70287],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[93514],"is_not":false,"summary":null,"term":"GO:0016531"},{"annotations":[70282],"is_not":false,"summary":null,"term":"GO:0005507"},{"annotations":[70285],"is_not":false,"summary":null,"term":"GO:0051536"},{"annotations":[70283],"is_not":false,"summary":null,"term":"GO:0008168"}],"mondo":[{"annotations":[88412],"is_not":false,"summary":null,"term":"MONDO:0859520"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03322","InterPro:IPR023471","InterPro:IPR007533","InterPro:IPR015324","EnsemblGenomes-Tr:EEB08183","GOA:B6K3X6","InterPro:IPR029063","UniProtKB/TrEMBL:B6K3X6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"}],"genes_by_uniquename":{"HGNC:19280":null,"HGNC:2261":null,"SJAG_03322":null,"SPAC1420.04c":null,"SPAC19B12.13":null,"YKL155C":null,"YPL132W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cytochrome c oxidase assembly protein CtaG/Cox11","id":"PF04442","interpro_description":"Cytochrome c oxidase assembly protein CtaG/Cox11","interpro_id":"IPR007533","interpro_name":"Cyt_c_oxidase_assmbl_CtaG","locations":[{"end":684,"start":533}],"match_end":684,"match_start":533,"name":"CtaG_Cox11"},{"dbname":"PFAM","description":"Mitochondrial small ribosomal subunit Rsm22","id":"PF09243","interpro_description":"Ribosomal protein Rsm22-like","interpro_id":"IPR015324","interpro_name":"Ribosomal_Rsm22-like","locations":[{"end":468,"start":146}],"match_end":468,"match_start":146,"name":"Rsm22"},{"dbname":"FUNFAM","description":"COX11 cytochrome c oxidase assembly homolog","id":"G3DSA:2.60.370.10:FF:000001","locations":[{"end":695,"start":560}],"match_end":695,"match_start":560},{"dbname":"SUPERFAMILY","id":"SSF53335","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":311,"start":158}],"match_end":311,"match_start":158,"name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"SUPERFAMILY","id":"SSF110111","interpro_description":"Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily","interpro_id":"IPR023471","interpro_name":"CtaG/Cox11_dom_sf","locations":[{"end":686,"start":565}],"match_end":686,"match_start":565,"name":"Ctag/Cox11"},{"dbname":"GENE3D","id":"G3DSA:2.60.370.10","interpro_description":"Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily","interpro_id":"IPR023471","interpro_name":"CtaG/Cox11_dom_sf","locations":[{"end":695,"start":560}],"match_end":695,"match_start":560,"name":"Ctag/Cox11"},{"dbname":"PANTHER","id":"PTHR21320","locations":[{"end":691,"start":493}],"match_end":691,"match_start":493,"name":"CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED"},{"dbname":"HAMAP","description":"Cytochrome c oxidase assembly protein CtaG [ctaG].","id":"MF_00155","interpro_description":"Cytochrome c oxidase assembly protein CtaG/Cox11","interpro_id":"IPR007533","interpro_name":"Cyt_c_oxidase_assmbl_CtaG","locations":[{"end":690,"start":457}],"match_end":690,"match_start":457,"name":"CtaG"},{"dbname":"NCBIFAM","description":"cytochrome c oxidase assembly protein","id":"NF003465","locations":[{"end":690,"start":513}],"match_end":690,"match_start":513,"name":"PRK05089.1"}],"location":{"chromosome_name":"supercont5.2","end_pos":869684,"start_pos":867591,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":667,"start":654}}],"name":"cox11","ortholog_annotations":[{"gene_uniquename":"SJAG_03322","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19280","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19280","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2261","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2261","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1420.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.13","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4932,"ortholog_uniquename":"YKL155C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4932,"ortholog_uniquename":"YKL155C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4932,"ortholog_uniquename":"YPL132W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4932,"ortholog_uniquename":"YPL132W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4932,"ortholog_uniquename":"YPL132W","reference_uniquename":"PMID:26896847"}],"product":"cytochrome c oxidase assembly protein Cox11","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005507","GO:0051536"],"not-binding":["GO:0016531","GO:0008168"]}},"subset_termids":["MONDO:0004069","GO:0007005","GO:0005739","GO:0016741","GO:0140104","GO:0140053","MONDO:0005066","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005507":null,"GO:0005743":null,"GO:0005759":null,"GO:0008168":null,"GO:0016531":null,"GO:0032543":null,"GO:0033617":null,"GO:0051536":null,"MONDO:0859520":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03322.1"],"transcripts_by_uniquename":{"SJAG_03322.1":null},"uniprot_identifier":"B6K3X6","uniquename":"SJAG_03322"}


id: SJAG_03323
data:
  {"cv_annotations":{"biological_process":[{"annotations":[63166],"is_not":false,"summary":null,"term":"GO:0000387"}],"cellular_component":[{"annotations":[103218],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[103219],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[103220],"is_not":false,"summary":null,"term":"GO:0032797"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08184","EnsemblGenomes-Gn:SJAG_03323","InterPro:IPR035426","UniProtKB/TrEMBL:B6K3X7"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":25,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"}],"genes_by_uniquename":{"HGNC:10884":null,"SJAG_03323":null,"SPAC19B12.12c":null,"SPAPB17E12.02":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Survival motor neuron (SMN) interacting protein 1 (SIP1)","id":"PF04938","interpro_description":"Gemin2/Brr1","interpro_id":"IPR035426","interpro_name":"Gemin2/Brr1","locations":[{"end":208,"start":40}],"match_end":208,"match_start":40,"name":"SIP1"},{"dbname":"GENE3D","id":"G3DSA:1.20.58.1070","locations":[{"end":234,"start":84}],"match_end":234,"match_start":84},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":25,"start":1}],"match_end":25,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":870885,"start_pos":870069,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":42,"start":31}}],"name":"gem2","ortholog_annotations":[{"gene_uniquename":"SJAG_03323","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10884","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03323","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10884","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03323","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.12c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03323","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.02","reference_uniquename":"PMID:21511999"}],"product":"SMN complex subunit Yip1/Gem2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0016071","GO:0005829","GO:0065003","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000387":null,"GO:0005634":null,"GO:0005829":null,"GO:0032797":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03323.1"],"transcripts_by_uniquename":{"SJAG_03323.1":null},"uniprot_identifier":"B6K3X7","uniquename":"SJAG_03323"}


id: SJAG_03324
data:
  {"cv_annotations":{"biological_process":[{"annotations":[65263],"is_not":false,"summary":null,"term":"GO:0016562"}],"cellular_component":[{"annotations":[77666],"is_not":false,"summary":null,"term":"GO:1990429"},{"annotations":[77663],"is_not":false,"summary":null,"term":"GO:0005778"}],"molecular_function":[{"annotations":[103225],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[65257],"is_not":false,"summary":null,"term":"GO:0008270"}],"mondo":[{"annotations":[89052],"is_not":false,"summary":null,"term":"MONDO:0013927"},{"annotations":[88137],"is_not":false,"summary":null,"term":"MONDO:0009959"}]},"dbxrefs":["InterPro:IPR013083","GOA:B6K3X8","InterPro:IPR001841","EnsemblGenomes-Gn:SJAG_03324","InterPro:IPR006845","UniProtKB/TrEMBL:B6K3X8","InterPro:IPR017375","EnsemblGenomes-Tr:EEB08185"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"}],"genes_by_uniquename":{"HGNC:8854":null,"SJAG_03324":null,"SPAPB17E12.03":null,"YMR026C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Pex2 / Pex12 amino terminal region","id":"PF04757","interpro_description":"Pex, N-terminal","interpro_id":"IPR006845","interpro_name":"Pex_N","locations":[{"end":239,"start":15}],"match_end":239,"match_start":15,"name":"Pex2_Pex12"},{"dbname":"PFAM","description":"Zinc finger, C3HC4 type (RING finger)","id":"PF00097","interpro_description":"Zinc finger, C3HC4 RING-type","interpro_id":"IPR018957","interpro_name":"Znf_C3HC4_RING-type","locations":[{"end":309,"start":273}],"match_end":309,"match_start":273,"name":"zf-C3HC4"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger RING-type profile.","id":"PS50089","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":311,"start":273}],"match_end":311,"match_start":273,"name":"ZF_RING_2"},{"dbname":"SUPERFAMILY","id":"SSF57850","locations":[{"end":317,"start":266}],"match_end":317,"match_start":266,"name":"RING/U-box"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":325,"start":259}],"match_end":325,"match_start":259,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PANTHER","id":"PTHR12888","interpro_description":"Peroxisome assembly protein 12","interpro_id":"IPR017375","interpro_name":"PEX12","locations":[{"end":323,"start":3}],"match_end":323,"match_start":3,"name":"PEROXISOME ASSEMBLY PROTEIN 12  PEROXIN-12"}],"location":{"chromosome_name":"supercont5.2","end_pos":872266,"start_pos":871177,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":115,"start":100}}],"name":"pex12","ortholog_annotations":[{"gene_uniquename":"SJAG_03324","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8854","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03324","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03324","ortholog_taxonid":4932,"ortholog_uniquename":"YMR026C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03324","ortholog_taxonid":4932,"ortholog_uniquename":"YMR026C","reference_uniquename":"PMID:26896847"}],"product":"peroxisomal ubiquitin-protein ligase E3 Pex12","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0061630"]}},"subset_termids":["MONDO:0006025","MONDO:0005244","MONDO:0005559","MONDO:0005066","MONDO:0019053","GO:0055085","GO:0019787","GO:0016746","GO:0007031","GO:0140096","GO:0005777"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005778":null,"GO:0008270":null,"GO:0016562":null,"GO:0061630":null,"GO:1990429":null,"MONDO:0009959":null,"MONDO:0013927":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03324.1"],"transcripts_by_uniquename":{"SJAG_03324.1":null},"uniprot_identifier":"B6K3X8","uniquename":"SJAG_03324"}


id: SJAG_03325
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103230],"is_not":false,"summary":null,"term":"GO:0006974"},{"annotations":[82262],"is_not":false,"summary":null,"term":"GO:0000338"}],"cellular_component":[{"annotations":[82261],"is_not":false,"summary":null,"term":"GO:0008180"},{"annotations":[103228],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[103232],"is_not":false,"summary":null,"term":"GO:0000822"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08186","EnsemblGenomes-Gn:SJAG_03325","InterPro:IPR036390","InterPro:IPR037750","UniProtKB/TrEMBL:B6K3X9","InterPro:IPR000717","GOA:B6K3X9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"}],"genes_by_uniquename":{"HGNC:30747":null,"SJAG_03325":null,"SPAPB17E12.04c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PCI domain","id":"PF01399","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":410,"start":331}],"match_end":410,"match_start":331,"name":"PCI"},{"dbname":"PROSITE_PROFILES","description":"PCI domain profile.","id":"PS50250","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":417,"start":248}],"match_end":417,"match_start":248,"name":"PCI"},{"dbname":"SMART","description":"motif in proteasome subunits, Int-6, Nip-1 and TRIP-15","id":"SM00088","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":432,"start":346}],"match_end":432,"match_start":346,"name":"PINT"},{"dbname":"SMART","description":"PCI/PINT associated module","id":"SM00753","locations":[{"end":344,"start":170}],"match_end":344,"match_start":170,"name":"PAM"},{"dbname":"FUNFAM","description":"COP9 signalosome complex subunit 2","id":"G3DSA:1.25.40.570:FF:000006","locations":[{"end":442,"start":74}],"match_end":442,"match_start":74},{"dbname":"SUPERFAMILY","id":"SSF46785","interpro_description":"Winged helix DNA-binding domain superfamily","interpro_id":"IPR036390","interpro_name":"WH_DNA-bd_sf","locations":[{"end":421,"start":340}],"match_end":421,"match_start":340,"name":"\"Winged helix\" DNA-binding domain"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.570","locations":[{"end":442,"start":71}],"match_end":442,"match_start":71},{"dbname":"PANTHER","id":"PTHR10678","interpro_description":"26S Proteasome and COP9 Signalosome Components","interpro_id":"IPR050871","interpro_name":"26S_Proteasome/COP9_Components","locations":[{"end":437,"start":14}],"match_end":437,"match_start":14,"name":"26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2"}],"location":{"chromosome_name":"supercont5.2","end_pos":873795,"start_pos":872271,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":26,"start":2}}],"name":"csn2","ortholog_annotations":[{"gene_uniquename":"SJAG_03325","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30747","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03325","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.04c","reference_uniquename":"PMID:21511999"}],"product":"COP9/signalosome complex subunit Csn2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000822"]}},"subset_termids":["GO:0005634","GO:0070647","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000338":null,"GO:0000822":null,"GO:0005829":null,"GO:0006974":null,"GO:0008180":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03325.1"],"transcripts_by_uniquename":{"SJAG_03325.1":null},"uniprot_identifier":"B6K3X9","uniquename":"SJAG_03325"}


id: SJAG_03326
data:
  {"cv_annotations":{"biological_process":[{"annotations":[116022],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[80245],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[68842],"is_not":false,"summary":null,"term":"GO:0030684"}],"molecular_function":[{"annotations":[68841],"is_not":false,"summary":null,"term":"GO:0019843"},{"annotations":[68839],"is_not":false,"summary":null,"term":"GO:0003735"},{"annotations":[68840],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["GOA:B6K3Y0","InterPro:IPR011332","EnsemblGenomes-Gn:SJAG_03326","InterPro:IPR001569","InterPro:IPR018267","UniProtKB/TrEMBL:B6K3Y0","EnsemblGenomes-Tr:EEB08187","InterPro:IPR011331"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":87,"start":50}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"}],"genes_by_uniquename":{"HGNC:10347":null,"SJAG_03326":null,"SPAPB17E12.05":null,"SPCC1223.05c":null,"YDR500C":null,"YLR185W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L37e","id":"PF01907","interpro_description":"Large ribosomal subunit protein eL37","interpro_id":"IPR001569","interpro_name":"Ribosomal_eL37","locations":[{"end":54,"start":2}],"match_end":54,"match_start":2,"name":"Ribosomal_L37e"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L37e signature.","id":"PS01077","interpro_description":"Large ribosomal subunit protein eL37, conserved site","interpro_id":"IPR018267","interpro_name":"Ribosomal_eL37_CS","locations":[{"end":23,"start":4}],"match_end":23,"match_start":4,"name":"RIBOSOMAL_L37E"},{"dbname":"FUNFAM","description":"Ribosomal protein L37","id":"G3DSA:2.20.25.30:FF:000001","locations":[{"end":87,"start":1}],"match_end":87,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF57829","interpro_description":"Zinc-binding ribosomal protein","interpro_id":"IPR011332","interpro_name":"Ribosomal_zn-bd","locations":[{"end":55,"start":1}],"match_end":55,"match_start":1,"name":"Zn-binding ribosomal proteins"},{"dbname":"GENE3D","id":"G3DSA:2.20.25.30","interpro_description":"Large ribosomal subunit protein eL37/eL43","interpro_id":"IPR011331","interpro_name":"Ribosomal_eL37/eL43","locations":[{"end":87,"start":1}],"match_end":87,"match_start":1},{"dbname":"PANTHER","id":"PTHR10768","locations":[{"end":82,"start":1}],"match_end":82,"match_start":1,"name":"60S RIBOSOMAL PROTEIN L37"},{"dbname":"HAMAP","description":"Large ribosomal subunit protein eL37 [rpl37e].","id":"MF_00547","interpro_description":"Large ribosomal subunit protein eL37","interpro_id":"IPR001569","interpro_name":"Ribosomal_eL37","locations":[{"end":53,"start":2}],"match_end":53,"match_start":2,"name":"Ribosomal_L37e"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":87,"start":50}],"match_end":87,"match_start":50,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":66,"start":52}],"match_end":66,"match_start":52,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":874933,"start_pos":874611,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":62,"start":53}}],"name":"rpl37a","ortholog_annotations":[{"gene_uniquename":"SJAG_03326","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10347","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10347","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1223.05c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":4932,"ortholog_uniquename":"YDR500C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":4932,"ortholog_uniquename":"YDR500C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":4932,"ortholog_uniquename":"YLR185W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":4932,"ortholog_uniquename":"YLR185W","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L37","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0019843","GO:0008270"],"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005829","GO:0002181","GO:0022626","GO:0005198","GO:0030684"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0008270":null,"GO:0019843":null,"GO:0022625":null,"GO:0030684":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03326.1"],"transcripts_by_uniquename":{"SJAG_03326.1":null},"uniprot_identifier":"B6K3Y0","uniquename":"SJAG_03326"}


id: SJAG_03327
data:
  {"coiled_coil_coords":[{"range":{"end":108,"start":81}},{"range":{"end":150,"start":130}},{"range":{"end":227,"start":158}}],"cv_annotations":{"biological_process":[{"annotations":[73786],"is_not":false,"summary":null,"term":"GO:0051315"},{"annotations":[103251],"is_not":false,"summary":null,"term":"GO:0031619"},{"annotations":[59942],"is_not":false,"summary":null,"term":"GO:0034501"},{"annotations":[103254],"is_not":false,"summary":null,"term":"GO:1905325"},{"annotations":[103255],"is_not":false,"summary":null,"term":"GO:0051455"}],"cellular_component":[{"annotations":[103248],"is_not":false,"summary":null,"term":"GO:0180019"},{"annotations":[103249],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08188","GOA:B6K3Y1","InterPro:IPR037475","EnsemblGenomes-Gn:SJAG_03327","UniProtKB/TrEMBL:B6K3Y1"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"},{"name":"ost3","uniquename":"SJAG_03333"}],"genes_by_uniquename":{"HGNC:13195":null,"SJAG_03327":null,"SPAPB17E12.06":null,"YDR532C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Kinetochore protein Sos7","id":"PF20882","interpro_description":"Kinetochore protein Sos7, coiled-coil domain","interpro_id":"IPR048781","interpro_name":"Sos7_CC","locations":[{"end":120,"start":46}],"match_end":120,"match_start":46,"name":"Sos7"},{"dbname":"PANTHER","id":"PTHR37329","interpro_description":"Kinetochore protein Sos7","interpro_id":"IPR037475","interpro_name":"Sos7","locations":[{"end":249,"start":10}],"match_end":249,"match_start":10,"name":"KINETOCHORE PROTEIN SOS7"},{"dbname":"COILS","id":"Coil","locations":[{"end":108,"start":81},{"end":150,"start":130},{"end":227,"start":158}],"match_end":227,"match_start":81,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":876246,"start_pos":875178,"strand":"forward"},"name":"sos7","ortholog_annotations":[{"gene_uniquename":"SJAG_03327","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13195","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03327","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03327","ortholog_taxonid":4932,"ortholog_uniquename":"YDR532C","reference_uniquename":"PMID:29761456"}],"product":"outer kinetochore KNL network protein Sos7","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0140013","GO:0000070","GO:0005634","GO:0023052","GO:0000776","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0031619":null,"GO:0034501":null,"GO:0051315":null,"GO:0051455":null,"GO:0180019":null,"GO:1905325":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03327.1"],"transcripts_by_uniquename":{"SJAG_03327.1":null},"uniprot_identifier":"B6K3Y1","uniquename":"SJAG_03327"}


id: SJAG_03328
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":239,"start":239}},{"assigned_by":"UniProtKB","range":{"end":247,"start":247}},{"assigned_by":"UniProtKB","range":{"end":283,"start":283}}],"cv_annotations":{"biological_process":[{"annotations":[80775],"is_not":false,"summary":null,"term":"GO:0000379"}],"cellular_component":[{"annotations":[103257],"is_not":false,"summary":null,"term":"GO:0032473"},{"annotations":[80772],"is_not":false,"summary":null,"term":"GO:0000214"}],"molecular_function":[{"annotations":[80774],"is_not":false,"summary":null,"term":"GO:0000213"}],"mondo":[{"annotations":[88905],"is_not":false,"summary":null,"term":"MONDO:0012890"}]},"dbxrefs":["InterPro:IPR006676","InterPro:IPR011856","GOA:B6K3Y2","InterPro:IPR006677","InterPro:IPR016589","EnsemblGenomes-Tr:EEB08189","InterPro:IPR036167","UniProtKB/TrEMBL:B6K3Y2","EnsemblGenomes-Gn:SJAG_03328"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"},{"name":"ost3","uniquename":"SJAG_03333"},{"name":"mrx21","uniquename":"SJAG_03334"}],"genes_by_uniquename":{"HGNC:28422":null,"SJAG_03328":null,"SPAPB17E12.07c":null,"YLR105C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"tRNA intron endonuclease, catalytic C-terminal domain","id":"PF01974","interpro_description":"tRNA intron endonuclease, catalytic domain-like","interpro_id":"IPR006677","interpro_name":"tRNA_intron_Endonuc_cat-like","locations":[{"end":291,"start":209}],"match_end":291,"match_start":209,"name":"tRNA_int_endo"},{"dbname":"CDD","description":"tRNA-intron_lyase_C","id":"cd22363","interpro_description":"tRNA intron endonuclease, catalytic domain-like","interpro_id":"IPR006677","interpro_name":"tRNA_intron_Endonuc_cat-like","locations":[{"end":290,"start":208}],"match_end":290,"match_start":208,"name":"tRNA-intron_lyase_C"},{"dbname":"SUPERFAMILY","id":"SSF53032","interpro_description":"tRNA intron endonuclease, catalytic domain-like superfamily","interpro_id":"IPR036167","interpro_name":"tRNA_intron_Endo_cat-like_sf","locations":[{"end":295,"start":208}],"match_end":295,"match_start":208,"name":"tRNA-intron endonuclease catalytic domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.1350.10","interpro_description":"tRNA endonuclease-like domain superfamily","interpro_id":"IPR011856","interpro_name":"tRNA_endonuc-like_dom_sf","locations":[{"end":305,"start":208}],"match_end":305,"match_start":208},{"dbname":"PANTHER","id":"PTHR21227","interpro_description":"tRNA-splicing endonuclease","interpro_id":"IPR006676","interpro_name":"tRNA_splic","locations":[{"end":338,"start":6}],"match_end":338,"match_start":6,"name":"TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2"},{"dbname":"PIRSF","id":"PIRSF011789","interpro_description":"tRNA-splicing endonuclease, SEN2 subunit","interpro_id":"IPR016589","interpro_name":"tRNA_splic_SEN2","locations":[{"end":338,"start":1}],"match_end":338,"match_start":1,"name":"tRNA_endo_SEN2"}],"location":{"chromosome_name":"supercont5.2","end_pos":877525,"start_pos":876341,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":24,"start":10}}],"name":"sen2","ortholog_annotations":[{"gene_uniquename":"SJAG_03328","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28422","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03328","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03328","ortholog_taxonid":4932,"ortholog_uniquename":"YLR105C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03328","ortholog_taxonid":4932,"ortholog_uniquename":"YLR105C","reference_uniquename":"PMID:26896847"}],"product":"tRNA-splicing endonuclease catalytic subunit Sen2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0000213"]}},"subset_termids":["GO:0140101","GO:0005634","GO:0006399","GO:0005739","MONDO:0005559","MONDO:0020022","GO:0016829","GO:0140098"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000213":null,"GO:0000214":null,"GO:0000379":null,"GO:0032473":null,"MONDO:0012890":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03328.1"],"transcripts_by_uniquename":{"SJAG_03328.1":null},"uniprot_identifier":"B6K3Y2","uniquename":"SJAG_03328"}


id: SJAG_03330
data:
  {"cv_annotations":{"biological_process":[{"annotations":[65149],"is_not":false,"summary":null,"term":"GO:0034599"},{"annotations":[77608],"is_not":false,"summary":null,"term":"GO:0006487"}],"cellular_component":[{"annotations":[77607],"is_not":false,"summary":null,"term":"GO:0005789"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3Y3","GOA:B6K3Y3","EnsemblGenomes-Tr:EEB08190","EnsemblGenomes-Gn:SJAG_03330","InterPro:IPR021100"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"},{"name":"ost3","uniquename":"SJAG_03333"},{"name":"mrx21","uniquename":"SJAG_03334"},{"name":"rpl18b","uniquename":"SJAG_03335"}],"genes_by_uniquename":{"SJAG_03330":null,"SPAPB17E12.08":null,"YNL080C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"N-glycosylation protein","id":"PF12326","interpro_description":"N-glycosylation protein EOS1","interpro_id":"IPR021100","interpro_name":"N-glycosylation_EOS1","locations":[{"end":214,"start":63}],"match_end":214,"match_start":63,"name":"EOS1"},{"dbname":"PRINTS","description":"N-glycosylation protein EOS1 signature","id":"PR02070","interpro_description":"N-glycosylation protein EOS1","interpro_id":"IPR021100","interpro_name":"N-glycosylation_EOS1","locations":[{"end":99,"start":84},{"end":147,"start":124},{"end":213,"start":198}],"match_end":213,"match_start":84,"name":"NGLYCOSEOS1"},{"dbname":"PANTHER","id":"PTHR28147","interpro_description":"N-glycosylation protein EOS1","interpro_id":"IPR021100","interpro_name":"N-glycosylation_EOS1","locations":[{"end":52,"start":9}],"match_end":52,"match_start":9,"name":"N-GLYCOSYLATION PROTEIN EOS1"}],"location":{"chromosome_name":"supercont5.2","end_pos":878745,"start_pos":877982,"strand":"forward"},"name":"eos1","ortholog_annotations":[{"gene_uniquename":"SJAG_03330","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03330","ortholog_taxonid":4932,"ortholog_uniquename":"YNL080C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03330","ortholog_taxonid":4932,"ortholog_uniquename":"YNL080C","reference_uniquename":"PMID:26896847"}],"product":"N-glycosylation protein Eos1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005789","GO:0006486","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005789":null,"GO:0006487":null,"GO:0034599":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":45,"start":23}},{"assigned_by":"TMHMM","range":{"end":80,"start":58}},{"assigned_by":"TMHMM","range":{"end":117,"start":95}},{"assigned_by":"TMHMM","range":{"end":146,"start":124}},{"assigned_by":"TMHMM","range":{"end":216,"start":194}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03330.1"],"transcripts_by_uniquename":{"SJAG_03330.1":null},"uniprot_identifier":"B6K3Y3","uniquename":"SJAG_03330"}


id: SJAG_03331
data:
  {"coiled_coil_coords":[{"range":{"end":49,"start":22}},{"range":{"end":137,"start":110}},{"range":{"end":217,"start":190}}],"cv_annotations":{"cellular_component":[{"annotations":[103264],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[103265],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[103266],"is_not":false,"summary":null,"term":"GO:0005737"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3Y4","EnsemblGenomes-Tr:EEB08191","EnsemblGenomes-Gn:SJAG_03331"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"},{"name":"ost3","uniquename":"SJAG_03333"},{"name":"mrx21","uniquename":"SJAG_03334"},{"name":"rpl18b","uniquename":"SJAG_03335"},{"uniquename":"SJAG_03336"}],"genes_by_uniquename":{"SJAG_03331":null,"SPAPB17E12.09":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":49,"start":22},{"end":137,"start":110},{"end":217,"start":190}],"match_end":217,"match_start":22,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":879778,"start_pos":879011,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":55,"start":40}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03331","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.09"}],"product":"conserved protein, expressed during meiotic cell cycle, possibly related to metazoan RAB11FIP4 family","references_by_uniquename":{"GO_REF:0000107":null},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0032153":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03331.1"],"transcripts_by_uniquename":{"SJAG_03331.1":null},"uniprot_identifier":"B6K3Y4","uniquename":"SJAG_03331"}


id: SJAG_03332
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103268],"is_not":false,"summary":null,"term":"GO:0000959"},{"annotations":[65336],"is_not":false,"summary":null,"term":"GO:0031167"}],"cellular_component":[{"annotations":[77718],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[77717],"is_not":false,"summary":null,"term":"GO:0008650"}],"mondo":[{"annotations":[88827],"is_not":false,"summary":null,"term":"MONDO:0032815"}]},"dbxrefs":["InterPro:IPR029063","UniProtKB/TrEMBL:B6K3Y5","EnsemblGenomes-Gn:SJAG_03332","GOA:B6K3Y5","InterPro:IPR002877","EnsemblGenomes-Tr:EEB08192"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"},{"name":"ost3","uniquename":"SJAG_03333"},{"name":"mrx21","uniquename":"SJAG_03334"},{"name":"rpl18b","uniquename":"SJAG_03335"},{"uniquename":"SJAG_03336"},{"name":"rcf2","uniquename":"SJAG_03337"}],"genes_by_uniquename":{"HGNC:16352":null,"SJAG_03332":null,"SPAPB17E12.10c":null,"YGL136C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"FtsJ-like methyltransferase","id":"PF01728","interpro_description":"Ribosomal RNA methyltransferase, FtsJ domain","interpro_id":"IPR002877","interpro_name":"RNA_MeTrfase_FtsJ_dom","locations":[{"end":272,"start":48}],"match_end":272,"match_start":48,"name":"FtsJ"},{"dbname":"CDD","description":"AdoMet_MTases","id":"cd02440","locations":[{"end":192,"start":63}],"match_end":192,"match_start":63,"name":"AdoMet_MTases"},{"dbname":"SUPERFAMILY","id":"SSF53335","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":101,"start":47},{"end":273,"start":146}],"match_end":273,"match_start":47,"name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.150","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":276,"start":46}],"match_end":276,"match_start":46,"name":"Vaccinia Virus protein VP39"},{"dbname":"PANTHER","id":"PTHR10920","interpro_description":"Ribosomal RNA large subunit methyltransferase RlmE","interpro_id":"IPR050082","interpro_name":"RNA_methyltr_RlmE","locations":[{"end":274,"start":47}],"match_end":274,"match_start":47,"name":"RIBOSOMAL RNA METHYLTRANSFERASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":880848,"start_pos":879768,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":111,"start":100}},{"range":{"end":169,"start":155}}],"name":"mrm202","ortholog_annotations":[{"gene_uniquename":"SJAG_03332","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16352","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03332","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03332","ortholog_taxonid":4932,"ortholog_uniquename":"YGL136C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial 2' O-ribose methyltransferase Mrm2-like","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008650"]}},"subset_termids":["GO:0042254","GO:0005739","GO:0140098","GO:0016741","MONDO:0004069","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000959":null,"GO:0005739":null,"GO:0008650":null,"GO:0031167":null,"MONDO:0032815":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03332.1"],"transcripts_by_uniquename":{"SJAG_03332.1":null},"uniprot_identifier":"B6K3Y5","uniquename":"SJAG_03332"}


id: SJAG_03333
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":308,"start":20}}],"cv_annotations":{"biological_process":[{"annotations":[81063],"is_not":false,"summary":null,"term":"GO:0018279"}],"cellular_component":[{"annotations":[81061],"is_not":false,"summary":null,"term":"GO:0008250"}],"molecular_function":[{"annotations":[81062],"is_not":false,"summary":null,"term":"GO:0004579"}],"mondo":[{"annotations":[87752],"is_not":false,"summary":null,"term":"MONDO:0026729"},{"annotations":[88917],"is_not":false,"summary":null,"term":"MONDO:0012615"},{"annotations":[88720],"is_not":false,"summary":null,"term":"MONDO:0010455"}],"sequence":[{"annotations":[82569],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08193","InterPro:IPR013766","InterPro:IPR021149","InterPro:IPR036249","UniProtKB/TrEMBL:B6K3Y6","EnsemblGenomes-Gn:SJAG_03333","GOA:B6K3Y6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"},{"name":"ost3","uniquename":"SJAG_03333"},{"name":"mrx21","uniquename":"SJAG_03334"},{"name":"rpl18b","uniquename":"SJAG_03335"},{"uniquename":"SJAG_03336"},{"name":"rcf2","uniquename":"SJAG_03337"},{"name":"rga10","uniquename":"SJAG_03338"}],"genes_by_uniquename":{"HGNC:28880":null,"HGNC:30242":null,"SJAG_03333":null,"SPAPB17E12.11":null,"YML019W":null,"YOR085W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"OST3 / OST6 family, transporter family","id":"PF04756","interpro_description":"Oligosaccharyl transferase complex, subunit OST3/OST6","interpro_id":"IPR021149","interpro_name":"OligosaccharylTrfase_OST3/OST6","locations":[{"end":304,"start":27}],"match_end":304,"match_start":27,"name":"OST3_OST6"},{"dbname":"CDD","description":"TRX_family","id":"cd02947","locations":[{"end":120,"start":38}],"match_end":120,"match_start":38,"name":"TRX_family"},{"dbname":"PROSITE_PROFILES","description":"Thioredoxin domain profile.","id":"PS51352","interpro_description":"Thioredoxin domain","interpro_id":"IPR013766","interpro_name":"Thioredoxin_domain","locations":[{"end":149,"start":15}],"match_end":149,"match_start":15,"name":"THIOREDOXIN_2"},{"dbname":"SUPERFAMILY","id":"SSF52833","interpro_description":"Thioredoxin-like superfamily","interpro_id":"IPR036249","interpro_name":"Thioredoxin-like_sf","locations":[{"end":147,"start":25}],"match_end":147,"match_start":25,"name":"Thioredoxin-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.30.10","locations":[{"end":166,"start":20}],"match_end":166,"match_start":20,"name":"Glutaredoxin"},{"dbname":"PANTHER","id":"PTHR12692","interpro_description":"Oligosaccharyl transferase complex, subunit OST3/OST6","interpro_id":"IPR021149","interpro_name":"OligosaccharylTrfase_OST3/OST6","locations":[{"end":305,"start":28}],"match_end":305,"match_start":28,"name":"DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE-RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":882184,"start_pos":881067,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":259,"start":244}}],"name":"ost3","ortholog_annotations":[{"gene_uniquename":"SJAG_03333","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28880","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03333","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30242","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03333","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03333","ortholog_taxonid":4932,"ortholog_uniquename":"YML019W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03333","ortholog_taxonid":4932,"ortholog_uniquename":"YML019W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03333","ortholog_taxonid":4932,"ortholog_uniquename":"YOR085W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03333","ortholog_taxonid":4932,"ortholog_uniquename":"YOR085W","reference_uniquename":"PMID:26896847"}],"product":"oligosaccharyltransferase complex gamma subunit, Ost3","references_by_uniquename":{"GO_REF:0000033":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":19,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004579"]}},"subset_termids":["GO:0005789","GO:0016757","GO:0005783","MONDO:0005046","MONDO:0024322","MONDO:0006025","MONDO:0005066","MONDO:0037792","GO:0006486"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004579":null,"GO:0008250":null,"GO:0018279":null,"MONDO:0010455":null,"MONDO:0012615":null,"MONDO:0026729":null,"SO:0000418":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":180,"start":163}},{"assigned_by":"TMHMM","range":{"end":211,"start":193}},{"assigned_by":"TMHMM","range":{"end":267,"start":245}},{"assigned_by":"TMHMM","range":{"end":296,"start":274}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03333.1"],"transcripts_by_uniquename":{"SJAG_03333.1":null},"uniprot_identifier":"B6K3Y6","uniquename":"SJAG_03333"}


id: SJAG_03334
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103276],"is_not":false,"summary":null,"term":"GO:1990554"},{"annotations":[103277],"is_not":false,"summary":null,"term":"GO:1990553"}],"cellular_component":[{"annotations":[58819],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[103278],"is_not":false,"summary":null,"term":"GO:0046964"},{"annotations":[103279],"is_not":false,"summary":null,"term":"GO:1902557"}],"mondo":[{"annotations":[88946],"is_not":false,"summary":null,"term":"MONDO:0032736"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08194","InterPro:IPR023395","EnsemblGenomes-Gn:SJAG_03334","InterPro:IPR002067","UniProtKB/TrEMBL:B6K3Y7","InterPro:IPR018108","GOA:B6K3Y7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"},{"name":"ost3","uniquename":"SJAG_03333"},{"name":"mrx21","uniquename":"SJAG_03334"},{"name":"rpl18b","uniquename":"SJAG_03335"},{"uniquename":"SJAG_03336"},{"name":"rcf2","uniquename":"SJAG_03337"},{"name":"rga10","uniquename":"SJAG_03338"},{"uniquename":"SJAG_03339"}],"genes_by_uniquename":{"HGNC:28380":null,"SJAG_03334":null,"SPAPB17E12.12c":null,"YPR011C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mitochondrial carrier protein","id":"PF00153","interpro_description":"Mitochondrial substrate/solute carrier","interpro_id":"IPR018108","interpro_name":"Mitochondrial_sb/sol_carrier","locations":[{"end":112,"start":28},{"end":237,"start":136},{"end":335,"start":247}],"match_end":335,"match_start":28,"name":"Mito_carr"},{"dbname":"PROSITE_PROFILES","description":"Solute carrier (Solcar) repeat profile.","id":"PS50920","interpro_description":"Mitochondrial substrate/solute carrier","interpro_id":"IPR018108","interpro_name":"Mitochondrial_sb/sol_carrier","locations":[{"end":112,"start":27},{"end":238,"start":135},{"end":335,"start":246}],"match_end":335,"match_start":27,"name":"SOLCAR"},{"dbname":"PRINTS","description":"Mitochondrial carrier protein signature","id":"PR00926","interpro_description":"Mitochondrial carrier protein","interpro_id":"IPR002067","interpro_name":"Mit_carrier","locations":[{"end":59,"start":32},{"end":168,"start":150},{"end":229,"start":211},{"end":277,"start":255}],"match_end":277,"match_start":32,"name":"MITOCARRIER"},{"dbname":"SUPERFAMILY","id":"SSF103506","interpro_description":"Mitochondrial carrier domain superfamily","interpro_id":"IPR023395","interpro_name":"Mt_carrier_dom_sf","locations":[{"end":331,"start":28}],"match_end":331,"match_start":28,"name":"Mitochondrial carrier"},{"dbname":"GENE3D","id":"G3DSA:1.50.40.10","interpro_description":"Mitochondrial carrier domain superfamily","interpro_id":"IPR023395","interpro_name":"Mt_carrier_dom_sf","locations":[{"end":337,"start":25}],"match_end":337,"match_start":25,"name":"Mitochondrial carrier domain"},{"dbname":"PANTHER","id":"PTHR24089","locations":[{"end":334,"start":33}],"match_end":334,"match_start":33,"name":"SOLUTE CARRIER FAMILY 25"}],"location":{"chromosome_name":"supercont5.2","end_pos":883406,"start_pos":882378,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":12,"start":1}}],"name":"mrx21","ortholog_annotations":[{"gene_uniquename":"SJAG_03334","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28380","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03334","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03334","ortholog_taxonid":4932,"ortholog_uniquename":"YPR011C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03334","ortholog_taxonid":4932,"ortholog_uniquename":"YPR011C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial carrier, 3'-phosphoadenosine 5'-phosphosulfate/ 5'-adenylyl sulfate Mrx21","references_by_uniquename":{"GO_REF:0000044":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0046964","GO:1902557"]}},"subset_termids":["GO:0055085","GO:0005739","GO:0022857"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0046964":null,"GO:1902557":null,"GO:1990553":null,"GO:1990554":null,"MONDO:0032736":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03334.1"],"transcripts_by_uniquename":{"SJAG_03334.1":null},"uniprot_identifier":"B6K3Y7","uniquename":"SJAG_03334"}


id: SJAG_03335
data:
  {"cv_annotations":{"biological_process":[{"annotations":[104385],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[75832],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[104383],"is_not":false,"summary":null,"term":"GO:0030684"}],"molecular_function":[{"annotations":[75833],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[75834],"is_not":false,"summary":null,"term":"GO:0003735"}],"mondo":[{"annotations":[87884],"is_not":false,"summary":null,"term":"MONDO:0032668"}]},"dbxrefs":["InterPro:IPR000039","EnsemblGenomes-Tr:EEB08195","InterPro:IPR021132","UniProtKB/TrEMBL:B6K3Y8","GOA:B6K3Y8","InterPro:IPR036227","InterPro:IPR021131","EnsemblGenomes-Gn:SJAG_03335"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"},{"name":"ost3","uniquename":"SJAG_03333"},{"name":"mrx21","uniquename":"SJAG_03334"},{"name":"rpl18b","uniquename":"SJAG_03335"},{"uniquename":"SJAG_03336"},{"name":"rcf2","uniquename":"SJAG_03337"},{"name":"rga10","uniquename":"SJAG_03338"},{"uniquename":"SJAG_03339"},{"name":"ste4","uniquename":"SJAG_03340"}],"genes_by_uniquename":{"HGNC:10310":null,"SJAG_03335":null,"SPAPB17E12.13":null,"SPBC11C11.07":null,"YNL301C":null,"YOL120C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein 60S L18 and 50S L18e","id":"PF17135","interpro_description":"Large ribosomal subunit protein uL15/eL18","interpro_id":"IPR021131","interpro_name":"Ribosomal_uL15/eL18","locations":[{"end":187,"start":2}],"match_end":187,"match_start":2,"name":"Ribosomal_L18"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L18e signature.","id":"PS01106","interpro_description":"Large ribosomal subunit protein eL18, conserved site","interpro_id":"IPR021132","interpro_name":"Ribosomal_eL18/eL18-A/B/_CS","locations":[{"end":66,"start":49}],"match_end":66,"match_start":49,"name":"RIBOSOMAL_L18E"},{"dbname":"FUNFAM","description":"60S ribosomal protein L18","id":"G3DSA:3.100.10.10:FF:000001","locations":[{"end":187,"start":1}],"match_end":187,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF52080","interpro_description":"Large ribosomal subunit protein uL15/eL18 superfamily","interpro_id":"IPR036227","interpro_name":"Ribosomal_uL15/eL18_sf","locations":[{"end":142,"start":20}],"match_end":142,"match_start":20,"name":"Ribosomal proteins L15p and L18e"},{"dbname":"GENE3D","id":"G3DSA:3.100.10.10","locations":[{"end":187,"start":1}],"match_end":187,"match_start":1},{"dbname":"PANTHER","id":"PTHR10934","interpro_description":"Large ribosomal subunit protein eL18","interpro_id":"IPR000039","interpro_name":"Ribosomal_eL18","locations":[{"end":187,"start":1}],"match_end":187,"match_start":1,"name":"60S RIBOSOMAL PROTEIN L18"}],"location":{"chromosome_name":"supercont5.2","end_pos":884361,"start_pos":883723,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":88,"start":80}}],"name":"rpl18b","ortholog_annotations":[{"gene_uniquename":"SJAG_03335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10310","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10310","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03335","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03335","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC11C11.07","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03335","ortholog_taxonid":4932,"ortholog_uniquename":"YNL301C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03335","ortholog_taxonid":4932,"ortholog_uniquename":"YNL301C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03335","ortholog_taxonid":4932,"ortholog_uniquename":"YOL120C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03335","ortholog_taxonid":4932,"ortholog_uniquename":"YOL120C","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L18","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0003735"]}},"subset_termids":["MONDO:0002280","GO:0005829","GO:0002181","GO:0005198","GO:0022626","GO:0030684","MONDO:0005570"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003723":null,"GO:0003735":null,"GO:0022625":null,"GO:0030684":null,"MONDO:0032668":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03335.1"],"transcripts_by_uniquename":{"SJAG_03335.1":null},"uniprot_identifier":"B6K3Y8","uniquename":"SJAG_03335"}


id: SJAG_03336
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75136],"is_not":false,"summary":null,"term":"GO:0006003"},{"annotations":[61690],"is_not":false,"summary":null,"term":"GO:0006000"}],"cellular_component":[{"annotations":[75135],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[75134],"is_not":false,"summary":null,"term":"GO:0003873"},{"annotations":[61689],"is_not":false,"summary":null,"term":"GO:0005524"}]},"dbxrefs":["InterPro:IPR001345","InterPro:IPR029033","UniProtKB/TrEMBL:B6K3Y9","EnsemblGenomes-Gn:SJAG_03336","InterPro:IPR013078","EnsemblGenomes-Tr:EEB08196","InterPro:IPR003094","InterPro:IPR013079","GOA:B6K3Y9","InterPro:IPR027417"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":44,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"},{"name":"ost3","uniquename":"SJAG_03333"},{"name":"mrx21","uniquename":"SJAG_03334"},{"name":"rpl18b","uniquename":"SJAG_03335"},{"uniquename":"SJAG_03336"},{"name":"rcf2","uniquename":"SJAG_03337"},{"name":"rga10","uniquename":"SJAG_03338"},{"uniquename":"SJAG_03339"},{"name":"ste4","uniquename":"SJAG_03340"},{"name":"utp8","uniquename":"SJAG_03341"}],"genes_by_uniquename":{"HGNC:8872":null,"HGNC:8873":null,"HGNC:8874":null,"HGNC:8875":null,"SJAG_03336":null,"SPAPB17E12.14c":null,"YIL107C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Histidine phosphatase superfamily (branch 1)","id":"PF00300","interpro_description":"Histidine phosphatase superfamily, clade-1","interpro_id":"IPR013078","interpro_name":"His_Pase_superF_clade-1","locations":[{"end":363,"start":321},{"end":580,"start":436}],"match_end":580,"match_start":321,"name":"His_Phos_1"},{"dbname":"PFAM","description":"6-phosphofructo-2-kinase","id":"PF01591","interpro_description":"6-phosphofructo-2-kinase","interpro_id":"IPR013079","interpro_name":"6Phosfructo_kin","locations":[{"end":318,"start":102}],"match_end":318,"match_start":102,"name":"6PF2K"},{"dbname":"CDD","description":"HP_PGM_like","id":"cd07067","interpro_description":"Histidine phosphatase superfamily, clade-1","interpro_id":"IPR013078","interpro_name":"His_Pase_superF_clade-1","locations":[{"end":581,"start":320}],"match_end":581,"match_start":320,"name":"HP_PGM_like"},{"dbname":"PROSITE_PATTERNS","description":"Phosphoglycerate mutase family phosphohistidine signature.","id":"PS00175","interpro_description":"Phosphoglycerate/bisphosphoglycerate mutase, active site","interpro_id":"IPR001345","interpro_name":"PG/BPGM_mutase_AS","locations":[{"end":332,"start":323}],"match_end":332,"match_start":323,"name":"PG_MUTASE"},{"dbname":"SMART","id":"SM00855","interpro_description":"Histidine phosphatase superfamily, clade-1","interpro_id":"IPR013078","interpro_name":"His_Pase_superF_clade-1","locations":[{"end":542,"start":320}],"match_end":542,"match_start":320,"name":"PGAM_5"},{"dbname":"PRINTS","description":"6-phosphofructo-2-kinase family signature","id":"PR00991","interpro_description":"Fructose-2,6-bisphosphatase","interpro_id":"IPR003094","interpro_name":"6Pfruct_kin","locations":[{"end":207,"start":193},{"end":234,"start":220},{"end":259,"start":245},{"end":343,"start":299}],"match_end":343,"match_start":193,"name":"6PFRUCTKNASE"},{"dbname":"FUNFAM","description":"GpmB, Fructose-2,6-bisphosphatase","id":"G3DSA:3.40.50.300:FF:000644","locations":[{"end":316,"start":106}],"match_end":316,"match_start":106},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":318,"start":107}],"match_end":318,"match_start":107,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SUPERFAMILY","id":"SSF53254","interpro_description":"Histidine phosphatase superfamily","interpro_id":"IPR029033","interpro_name":"His_PPase_superfam","locations":[{"end":365,"start":320},{"end":589,"start":435}],"match_end":589,"match_start":320,"name":"Phosphoglycerate mutase-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":316,"start":106}],"match_end":316,"match_start":106},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1240","interpro_description":"Histidine phosphatase superfamily","interpro_id":"IPR029033","interpro_name":"His_PPase_superfam","locations":[{"end":363,"start":317},{"end":593,"start":433}],"match_end":593,"match_start":317},{"dbname":"PANTHER","id":"PTHR10606","interpro_description":"Fructose-2,6-bisphosphatase","interpro_id":"IPR003094","interpro_name":"6Pfruct_kin","locations":[{"end":585,"start":90}],"match_end":585,"match_start":90,"name":"6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE"},{"dbname":"PIRSF","id":"PIRSF000709","locations":[{"end":603,"start":36}],"match_end":603,"match_start":36,"name":"6PFK_fruc_bisph_Ptase"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":44,"start":1}],"match_end":44,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":10,"start":1},{"end":30,"start":20}],"match_end":30,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":886820,"start_pos":884802,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":67,"start":58}},{"range":{"end":420,"start":381}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8872","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8873","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8874","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8875","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03336","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03336","ortholog_taxonid":4932,"ortholog_uniquename":"YIL107C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03336","ortholog_taxonid":4932,"ortholog_uniquename":"YIL107C","reference_uniquename":"PMID:26896847"}],"product":"6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0003873"]}},"subset_termids":["GO:0005975","GO:0005829","GO:0016301"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003873":null,"GO:0005524":null,"GO:0005829":null,"GO:0006000":null,"GO:0006003":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03336.1"],"transcripts_by_uniquename":{"SJAG_03336.1":null},"uniprot_identifier":"B6K3Y9","uniquename":"SJAG_03336"}


id: SJAG_03337
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91066],"is_not":false,"summary":null,"term":"GO:0033617"}],"cellular_component":[{"annotations":[91063],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[91065],"is_not":false,"summary":null,"term":"GO:0045277"}],"molecular_function":[{"annotations":[91067],"is_not":false,"summary":null,"term":"GO:0004129"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08197","InterPro:IPR040153","InterPro:IPR007667","EnsemblGenomes-Gn:SJAG_03337","UniProtKB/TrEMBL:B6K3Z0"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":97,"start":1}},{"range":{"end":345,"start":299}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrm202","uniquename":"SJAG_03332"},{"name":"ost3","uniquename":"SJAG_03333"},{"name":"mrx21","uniquename":"SJAG_03334"},{"name":"rpl18b","uniquename":"SJAG_03335"},{"uniquename":"SJAG_03336"},{"name":"rcf2","uniquename":"SJAG_03337"},{"name":"rga10","uniquename":"SJAG_03338"},{"uniquename":"SJAG_03339"},{"name":"ste4","uniquename":"SJAG_03340"},{"name":"utp8","uniquename":"SJAG_03341"},{"name":"spg1","uniquename":"SJAG_03342"}],"genes_by_uniquename":{"HGNC:24318":null,"HGNC:26984":null,"HGNC:28044":null,"HGNC:28311":null,"HGNC:29527":null,"SJAG_03337":null,"SPAC1565.01":null,"YNR018W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Hypoxia induced protein conserved region","id":"PF04588","interpro_description":"Hypoxia induced protein, domain","interpro_id":"IPR007667","interpro_name":"Hypoxia_induced_domain","locations":[{"end":247,"start":211}],"match_end":247,"match_start":211,"name":"HIG_1_N"},{"dbname":"PROSITE_PROFILES","description":"HIG1 domain profile.","id":"PS51503","interpro_description":"Hypoxia induced protein, domain","interpro_id":"IPR007667","interpro_name":"Hypoxia_induced_domain","locations":[{"end":263,"start":171}],"match_end":263,"match_start":171,"name":"HIG1"},{"dbname":"PANTHER","id":"PTHR28018","interpro_description":"Respiratory supercomplex factor 2, mitochondrial","interpro_id":"IPR040153","interpro_name":"Rcf2","locations":[{"end":300,"start":196}],"match_end":300,"match_start":196,"name":"RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":97,"start":1},{"end":345,"start":299}],"match_end":345,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":325,"start":316}],"match_end":325,"match_start":316,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":72,"start":63},{"end":95,"start":80}],"match_end":95,"match_start":63,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":62,"start":47}],"match_end":62,"match_start":47,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":888081,"start_pos":887044,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":258,"start":243}},{"range":{"end":324,"start":314}}],"name":"rcf2","ortholog_annotations":[{"gene_uniquename":"SJAG_03337","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24318","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03337","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26984","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03337","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28044","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03337","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28311","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03337","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29527","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03337","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1565.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03337","ortholog_taxonid":4932,"ortholog_uniquename":"YNR018W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03337","ortholog_taxonid":4932,"ortholog_uniquename":"YNR018W","reference_uniquename":"PMID:26896847"}],"product":"cytochrome c oxidase subunit Rcf2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004129"]}},"subset_termids":["GO:0022857","GO:0007005","GO:0005739","GO:0016491","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004129":null,"GO:0005743":null,"GO:0033617":null,"GO:0045277":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03337.1"],"transcripts_by_uniquename":{"SJAG_03337.1":null},"uniprot_identifier":"B6K3Z0","uniquename":"SJAG_03337"}


id: SJAG_03338
data:
  {"coiled_coil_coords":[{"range":{"end":275,"start":255}}],"cv_annotations":{"biological_process":[{"annotations":[91071],"is_not":false,"summary":null,"term":"GO:0120010"},{"annotations":[67202],"is_not":false,"summary":null,"term":"GO:0007165"}],"cellular_component":[{"annotations":[67205],"is_not":false,"summary":null,"term":"GO:0005938"},{"annotations":[67204],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[91070],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[67203],"is_not":false,"summary":null,"term":"GO:0005096"},{"annotations":[91074],"is_not":false,"summary":null,"term":"GO:0120014"}]},"dbxrefs":["GOA:B6K3Z1","EnsemblGenomes-Gn:SJAG_03338","InterPro:IPR000198","EnsemblGenomes-Tr:EEB08198","InterPro:IPR001251","InterPro:IPR036865","UniProtKB/TrEMBL:B6K3Z1","InterPro:IPR008936"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":288,"start":265}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ost3","uniquename":"SJAG_03333"},{"name":"mrx21","uniquename":"SJAG_03334"},{"name":"rpl18b","uniquename":"SJAG_03335"},{"uniquename":"SJAG_03336"},{"name":"rcf2","uniquename":"SJAG_03337"},{"name":"rga10","uniquename":"SJAG_03338"},{"uniquename":"SJAG_03339"},{"name":"ste4","uniquename":"SJAG_03340"},{"name":"utp8","uniquename":"SJAG_03341"},{"name":"spg1","uniquename":"SJAG_03342"},{"name":"knd1","uniquename":"SJAG_05297"}],"genes_by_uniquename":{"HGNC:673":null,"SJAG_03338":null,"SPAC1565.02c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Divergent CRAL/TRIO domain","id":"PF13716","interpro_description":"CRAL-TRIO lipid binding domain","interpro_id":"IPR001251","interpro_name":"CRAL-TRIO_dom","locations":[{"end":150,"start":19}],"match_end":150,"match_start":19,"name":"CRAL_TRIO_2"},{"dbname":"PFAM","description":"RhoGAP domain","id":"PF00620","interpro_description":"Rho GTPase-activating protein domain","interpro_id":"IPR000198","interpro_name":"RhoGAP_dom","locations":[{"end":348,"start":188}],"match_end":348,"match_start":188,"name":"RhoGAP"},{"dbname":"CDD","description":"RhoGAP","id":"cd00159","locations":[{"end":374,"start":183}],"match_end":374,"match_start":183,"name":"RhoGAP"},{"dbname":"PROSITE_PROFILES","description":"Rho GTPase-activating proteins domain profile.","id":"PS50238","interpro_description":"Rho GTPase-activating protein domain","interpro_id":"IPR000198","interpro_name":"RhoGAP_dom","locations":[{"end":379,"start":160}],"match_end":379,"match_start":160,"name":"RHOGAP"},{"dbname":"SMART","id":"SM00324","interpro_description":"Rho GTPase-activating protein domain","interpro_id":"IPR000198","interpro_name":"RhoGAP_dom","locations":[{"end":376,"start":179}],"match_end":376,"match_start":179,"name":"RhoGAP_3"},{"dbname":"SUPERFAMILY","id":"SSF48350","interpro_description":"Rho GTPase activation protein","interpro_id":"IPR008936","interpro_name":"Rho_GTPase_activation_prot","locations":[{"end":380,"start":188}],"match_end":380,"match_start":188,"name":"GTPase activation domain, GAP"},{"dbname":"GENE3D","id":"G3DSA:1.10.555.10","interpro_description":"Rho GTPase activation protein","interpro_id":"IPR008936","interpro_name":"Rho_GTPase_activation_prot","locations":[{"end":383,"start":155}],"match_end":383,"match_start":155,"name":"Rho GTPase activation protein"},{"dbname":"GENE3D","id":"G3DSA:3.40.525.10","interpro_description":"CRAL-TRIO lipid binding domain superfamily","interpro_id":"IPR036865","interpro_name":"CRAL-TRIO_dom_sf","locations":[{"end":151,"start":5}],"match_end":151,"match_start":5},{"dbname":"PANTHER","id":"PTHR45808","locations":[{"end":385,"start":61}],"match_end":385,"match_start":61,"name":"RHO GTPASE-ACTIVATING PROTEIN 68F"},{"dbname":"COILS","id":"Coil","locations":[{"end":275,"start":255}],"match_end":275,"match_start":255,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":288,"start":265}],"match_end":288,"match_start":265,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":889663,"start_pos":888208,"strand":"reverse"},"name":"rga10","ortholog_annotations":[{"gene_uniquename":"SJAG_03338","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:673","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03338","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1565.02c","reference_uniquename":"PMID:21511999"}],"product":"RhoGAP, with CRAL-TRIO domain Rga10","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0005096","GO:0120014"]}},"subset_termids":["GO:0120013","GO:0061024","GO:0023052","GO:0005794","GO:0005938","GO:0098772","GO:0030234"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005096":null,"GO:0005794":null,"GO:0005938":null,"GO:0007165":null,"GO:0032153":null,"GO:0120010":null,"GO:0120014":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03338.1"],"transcripts_by_uniquename":{"SJAG_03338.1":null},"uniprot_identifier":"B6K3Z1","uniquename":"SJAG_03338"}


id: SJAG_03339
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03339","EnsemblGenomes-Tr:EEB08199","UniProtKB/TrEMBL:B6K3Z2"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":103,"start":58}},{"range":{"end":141,"start":122}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrx21","uniquename":"SJAG_03334"},{"name":"rpl18b","uniquename":"SJAG_03335"},{"uniquename":"SJAG_03336"},{"name":"rcf2","uniquename":"SJAG_03337"},{"name":"rga10","uniquename":"SJAG_03338"},{"uniquename":"SJAG_03339"},{"name":"ste4","uniquename":"SJAG_03340"},{"name":"utp8","uniquename":"SJAG_03341"},{"name":"spg1","uniquename":"SJAG_03342"},{"name":"knd1","uniquename":"SJAG_05297"},{"name":"cdc48","uniquename":"SJAG_03345"}],"genes_by_uniquename":{"SJAG_03339":null,"SPAC1565.03":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":103,"start":58},{"end":141,"start":122}],"match_end":141,"match_start":58,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":89,"start":80}],"match_end":89,"match_start":80,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":891090,"start_pos":890467,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":66,"start":61}},{"range":{"end":88,"start":79}},{"range":{"end":108,"start":97}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03339","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1565.03"}],"product":"Schizosaccharomyces specific protein","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_03339.1"],"transcripts_by_uniquename":{"SJAG_03339.1":null},"uniprot_identifier":"B6K3Z2","uniquename":"SJAG_03339"}


id: SJAG_03340
data:
  {"coiled_coil_coords":[{"range":{"end":125,"start":98}}],"cv_annotations":{"biological_process":[{"annotations":[91076],"is_not":false,"summary":null,"term":"GO:0071507"}],"cellular_component":[{"annotations":[91075],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[91077],"is_not":false,"summary":null,"term":"GO:0043539"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08200","EnsemblGenomes-Gn:SJAG_03340","GOA:B6K3Z3","InterPro:IPR013761","InterPro:IPR000159","InterPro:IPR001660","UniProtKB/TrEMBL:B6K3Z3"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":211,"start":144}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl18b","uniquename":"SJAG_03335"},{"uniquename":"SJAG_03336"},{"name":"rcf2","uniquename":"SJAG_03337"},{"name":"rga10","uniquename":"SJAG_03338"},{"uniquename":"SJAG_03339"},{"name":"ste4","uniquename":"SJAG_03340"},{"name":"utp8","uniquename":"SJAG_03341"},{"name":"spg1","uniquename":"SJAG_03342"},{"name":"knd1","uniquename":"SJAG_05297"},{"name":"cdc48","uniquename":"SJAG_03345"},{"name":"rst2","uniquename":"SJAG_03346"}],"genes_by_uniquename":{"SJAG_03340":null,"SPAC1565.04c":null,"YCL032W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SAM domain (Sterile alpha motif)","id":"PF07647","interpro_description":"Sterile alpha motif domain","interpro_id":"IPR001660","interpro_name":"SAM","locations":[{"end":72,"start":10}],"match_end":72,"match_start":10,"name":"SAM_2"},{"dbname":"PFAM","description":"Ras association (RalGDS/AF-6) domain","id":"PF00788","interpro_description":"Ras-associating domain","interpro_id":"IPR000159","interpro_name":"RA_dom","locations":[{"end":307,"start":241}],"match_end":307,"match_start":241,"name":"RA"},{"dbname":"PROSITE_PROFILES","description":"Ras-associating (RA) domain profile.","id":"PS50200","interpro_description":"Ras-associating domain","interpro_id":"IPR000159","interpro_name":"RA_dom","locations":[{"end":308,"start":238}],"match_end":308,"match_start":238,"name":"RA"},{"dbname":"PROSITE_PROFILES","description":"SAM domain profile.","id":"PS50105","interpro_description":"Sterile alpha motif domain","interpro_id":"IPR001660","interpro_name":"SAM","locations":[{"end":74,"start":12}],"match_end":74,"match_start":12,"name":"SAM_DOMAIN"},{"dbname":"SMART","id":"SM00454","interpro_description":"Sterile alpha motif domain","interpro_id":"IPR001660","interpro_name":"SAM","locations":[{"end":74,"start":9}],"match_end":74,"match_start":9,"name":"SAM_4"},{"dbname":"SMART","id":"SM00314","interpro_description":"Ras-associating domain","interpro_id":"IPR000159","interpro_name":"RA_dom","locations":[{"end":308,"start":220}],"match_end":308,"match_start":220,"name":"RA_5"},{"dbname":"SUPERFAMILY","id":"SSF47769","interpro_description":"Sterile alpha motif/pointed domain superfamily","interpro_id":"IPR013761","interpro_name":"SAM/pointed_sf","locations":[{"end":73,"start":8}],"match_end":73,"match_start":8,"name":"SAM/Pointed domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.150.50","interpro_description":"Sterile alpha motif/pointed domain superfamily","interpro_id":"IPR013761","interpro_name":"SAM/pointed_sf","locations":[{"end":85,"start":2}],"match_end":85,"match_start":2},{"dbname":"PANTHER","id":"PTHR46829","locations":[{"end":73,"start":6}],"match_end":73,"match_start":6,"name":"STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 15"},{"dbname":"COILS","id":"Coil","locations":[{"end":125,"start":98}],"match_end":125,"match_start":98,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":211,"start":144}],"match_end":211,"match_start":144,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":209,"start":163}],"match_end":209,"match_start":163,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":159,"start":145}],"match_end":159,"match_start":145,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":892590,"start_pos":891531,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":126,"start":99}},{"range":{"end":208,"start":162}}],"name":"ste4","ortholog_annotations":[{"gene_uniquename":"SJAG_03340","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1565.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03340","ortholog_taxonid":4932,"ortholog_uniquename":"YCL032W","reference_uniquename":"PMID:29761456"}],"product":"MAPK cascade adaptor protein Ste4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0043539"]}},"subset_termids":["GO:0023052","GO:0000747","GO:0098772","GO:0005829","GO:0030234"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0043539":null,"GO:0071507":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03340.1"],"transcripts_by_uniquename":{"SJAG_03340.1":null},"uniprot_identifier":"B6K3Z3","uniquename":"SJAG_03340"}


id: SJAG_03341
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91080],"is_not":false,"summary":null,"term":"GO:0000462"}],"cellular_component":[{"annotations":[91078],"is_not":false,"summary":null,"term":"GO:0032040"},{"annotations":[91079],"is_not":false,"summary":null,"term":"GO:0034455"}],"molecular_function":[{"annotations":[91081],"is_not":false,"summary":null,"term":"GO:0030515"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08201","InterPro:IPR018843","UniProtKB/TrEMBL:B6K3Z4","EnsemblGenomes-Gn:SJAG_03341"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03336"},{"name":"rcf2","uniquename":"SJAG_03337"},{"name":"rga10","uniquename":"SJAG_03338"},{"uniquename":"SJAG_03339"},{"name":"ste4","uniquename":"SJAG_03340"},{"name":"utp8","uniquename":"SJAG_03341"},{"name":"spg1","uniquename":"SJAG_03342"},{"name":"knd1","uniquename":"SJAG_05297"},{"name":"cdc48","uniquename":"SJAG_03345"},{"name":"rst2","uniquename":"SJAG_03346"},{"name":"fsv1","uniquename":"SJAG_03347"}],"genes_by_uniquename":{"HGNC:24557":null,"SJAG_03341":null,"SPAC1565.05":null,"YGR128C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Utp8, N-terminal beta propeller","id":"PF10395","interpro_description":"Utp8, beta-propeller","interpro_id":"IPR018843","interpro_name":"Utp8_b-prop","locations":[{"end":406,"start":1}],"match_end":406,"match_start":1,"name":"Utp8_b_propeller"},{"dbname":"PFAM","description":"Utp8, C-terminal","id":"PF22542","interpro_description":"Utp8, C-terminal","interpro_id":"IPR053881","interpro_name":"Utp8_C","locations":[{"end":767,"start":432}],"match_end":767,"match_start":432,"name":"Utp8_C"}],"location":{"chromosome_name":"supercont5.2","end_pos":895721,"start_pos":893418,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":26,"start":7}},{"range":{"end":689,"start":685}}],"name":"utp8","ortholog_annotations":[{"gene_uniquename":"SJAG_03341","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24557","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03341","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1565.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03341","ortholog_taxonid":4932,"ortholog_uniquename":"YGR128C","reference_uniquename":"PMID:29761456"}],"product":"small subunit processome, t-UTP complex subunit Utp8","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030515"]}},"subset_termids":["GO:0042254","GO:0005634","GO:0005730","GO:0030684"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000462":null,"GO:0030515":null,"GO:0032040":null,"GO:0034455":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03341.1"],"transcripts_by_uniquename":{"SJAG_03341.1":null},"uniprot_identifier":"B6K3Z4","uniquename":"SJAG_03341"}


id: SJAG_03342
data:
  {"cv_annotations":{"biological_process":[{"annotations":[79735],"is_not":false,"summary":null,"term":"GO:0140281"},{"annotations":[91085],"is_not":false,"summary":null,"term":"GO:0031028"}],"cellular_component":[{"annotations":[91082],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[91083],"is_not":false,"summary":null,"term":"GO:0044732"}],"molecular_function":[{"annotations":[79733],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[79734],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[91088],"is_not":false,"summary":null,"term":"GO:0035591"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08202","InterPro:IPR027417","InterPro:IPR001806","GOA:B6K3Z5","UniProtKB/TrEMBL:B6K3Z5","InterPro:IPR017231","InterPro:IPR005225","EnsemblGenomes-Gn:SJAG_03342"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rcf2","uniquename":"SJAG_03337"},{"name":"rga10","uniquename":"SJAG_03338"},{"uniquename":"SJAG_03339"},{"name":"ste4","uniquename":"SJAG_03340"},{"name":"utp8","uniquename":"SJAG_03341"},{"name":"spg1","uniquename":"SJAG_03342"},{"name":"knd1","uniquename":"SJAG_05297"},{"name":"cdc48","uniquename":"SJAG_03345"},{"name":"rst2","uniquename":"SJAG_03346"},{"name":"fsv1","uniquename":"SJAG_03347"},{"name":"mvd1","uniquename":"SJAG_03349"}],"genes_by_uniquename":{"SJAG_03342":null,"SPAC1565.06c":null,"YML064C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ras family","id":"PF00071","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":175,"start":12}],"match_end":175,"match_start":12,"name":"Ras"},{"dbname":"CDD","description":"Spg1","id":"cd04128","interpro_description":"Small GTPase Tem1/Spg1","interpro_id":"IPR017231","interpro_name":"Small_GTPase_Tem1/Spg1","locations":[{"end":192,"start":11}],"match_end":192,"match_start":11,"name":"Spg1"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Rab1 family profile.","id":"PS51419","locations":[{"end":198,"start":6}],"match_end":198,"match_start":6,"name":"RAB"},{"dbname":"SMART","id":"SM00175","locations":[{"end":178,"start":11}],"match_end":178,"match_start":11,"name":"rab_sub_5"},{"dbname":"SMART","id":"SM00174","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":174,"start":13}],"match_end":174,"match_start":13,"name":"rho_sub_3"},{"dbname":"SMART","id":"SM00173","locations":[{"end":178,"start":8}],"match_end":178,"match_start":8,"name":"ras_sub_4"},{"dbname":"PRINTS","description":"Transforming protein P21 ras signature","id":"PR00449","locations":[{"end":32,"start":11},{"end":50,"start":34},{"end":74,"start":52},{"end":126,"start":113},{"end":175,"start":153}],"match_end":175,"match_start":11,"name":"RASTRNSFRMNG"},{"dbname":"FUNFAM","description":"Septum-promoting GTP-binding protein 1","id":"G3DSA:3.40.50.300:FF:000330","locations":[{"end":186,"start":1}],"match_end":186,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":184,"start":7}],"match_end":184,"match_start":7,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":186,"start":1}],"match_end":186,"match_start":1},{"dbname":"PANTHER","id":"PTHR47978","locations":[{"end":179,"start":8}],"match_end":179,"match_start":8},{"dbname":"PIRSF","id":"PIRSF037527","interpro_description":"Small GTPase Tem1/Spg1","interpro_id":"IPR017231","interpro_name":"Small_GTPase_Tem1/Spg1","locations":[{"end":198,"start":1}],"match_end":198,"match_start":1,"name":"GTPase_Tem1"},{"dbname":"NCBIFAM","description":"small GTP-binding protein domain","id":"TIGR00231","interpro_description":"Small GTP-binding domain","interpro_id":"IPR005225","interpro_name":"Small_GTP-bd","locations":[{"end":172,"start":10}],"match_end":172,"match_start":10,"name":"small_GTP"}],"location":{"chromosome_name":"supercont5.2","end_pos":896958,"start_pos":896059,"strand":"reverse"},"name":"spg1","ortholog_annotations":[{"gene_uniquename":"SJAG_03342","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1565.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03342","ortholog_taxonid":4932,"ortholog_uniquename":"YML064C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03342","ortholog_taxonid":4932,"ortholog_uniquename":"YML064C","reference_uniquename":"PMID:26896847"}],"product":"SIN signalling GTPase Spg1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525"],"not-binding":["GO:0035591","GO:0003924"]}},"subset_termids":["GO:0000281","GO:0060090","GO:0015630","GO:0023052","GO:0005816","GO:0003924"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003924":null,"GO:0005525":null,"GO:0031028":null,"GO:0035591":null,"GO:0035974":null,"GO:0044732":null,"GO:0140281":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03342.1"],"transcripts_by_uniquename":{"SJAG_03342.1":null},"uniprot_identifier":"B6K3Z5","uniquename":"SJAG_03342"}


id: SJAG_03345
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77398],"is_not":false,"summary":null,"term":"GO:0097352"},{"annotations":[91103],"is_not":false,"summary":null,"term":"GO:0180027"},{"annotations":[77400],"is_not":false,"summary":null,"term":"GO:0051228"},{"annotations":[91105],"is_not":false,"summary":null,"term":"GO:1900039"},{"annotations":[77399],"is_not":false,"summary":null,"term":"GO:0030970"},{"annotations":[91107],"is_not":false,"summary":null,"term":"GO:1990116"},{"annotations":[91108],"is_not":false,"summary":null,"term":"GO:0032933"}],"cellular_component":[{"annotations":[91093],"is_not":false,"summary":null,"term":"GO:0036266"},{"annotations":[91094],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[91096],"is_not":false,"summary":null,"term":"GO:0032473"},{"annotations":[77394],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[91098],"is_not":false,"summary":null,"term":"GO:0000836"},{"annotations":[77393],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[91100],"is_not":false,"summary":null,"term":"GO:1990112"},{"annotations":[77397],"is_not":false,"summary":null,"term":"GO:0034098"}],"molecular_function":[{"annotations":[64867],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[77392],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[91112],"is_not":false,"summary":null,"term":"GO:0140545"},{"annotations":[77396],"is_not":false,"summary":null,"term":"GO:0031593"}],"mondo":[{"annotations":[87783],"is_not":false,"summary":null,"term":"MONDO:0014735"},{"annotations":[88577],"is_not":false,"summary":null,"term":"MONDO:0013501"},{"annotations":[88555],"is_not":false,"summary":null,"term":"MONDO:0008178"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03345","InterPro:IPR003960","InterPro:IPR003959","InterPro:IPR004201","InterPro:IPR009010","InterPro:IPR005938","InterPro:IPR000641","InterPro:IPR041569","InterPro:IPR027417","GOA:B6K3Z7","InterPro:IPR003338","EnsemblGenomes-Tr:EEB08204","InterPro:IPR003593","InterPro:IPR029067","UniProtKB/TrEMBL:B6K3Z7"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":23,"start":1}},{"range":{"end":742,"start":721}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03339"},{"name":"ste4","uniquename":"SJAG_03340"},{"name":"utp8","uniquename":"SJAG_03341"},{"name":"spg1","uniquename":"SJAG_03342"},{"name":"knd1","uniquename":"SJAG_05297"},{"name":"cdc48","uniquename":"SJAG_03345"},{"name":"rst2","uniquename":"SJAG_03346"},{"name":"fsv1","uniquename":"SJAG_03347"},{"name":"mvd1","uniquename":"SJAG_03349"},{"name":"mtr4","uniquename":"SJAG_16455"},{"name":"cut9","uniquename":"SJAG_03350"}],"genes_by_uniquename":{"HGNC:12666":null,"SJAG_03345":null,"SPAC1565.08":null,"YDL126C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ATPase family associated with various cellular activities (AAA)","id":"PF00004","interpro_description":"ATPase, AAA-type, core","interpro_id":"IPR003959","interpro_name":"ATPase_AAA_core","locations":[{"end":383,"start":254},{"end":659,"start":527}],"match_end":659,"match_start":254,"name":"AAA"},{"dbname":"PFAM","description":"AAA+ lid domain","id":"PF17862","interpro_description":"AAA ATPase, AAA+ lid domain","interpro_id":"IPR041569","interpro_name":"AAA_lid_3","locations":[{"end":446,"start":406},{"end":721,"start":681}],"match_end":721,"match_start":406,"name":"AAA_lid_3"},{"dbname":"PFAM","description":"Cell division protein 48 (CDC48), N-terminal domain","id":"PF02359","interpro_description":"CDC48, N-terminal subdomain","interpro_id":"IPR003338","interpro_name":"CDC4_N-term_subdom","locations":[{"end":119,"start":39}],"match_end":119,"match_start":39,"name":"CDC48_N"},{"dbname":"PFAM","description":"Cell division protein 48 (CDC48), domain 2","id":"PF02933","interpro_description":"CDC48, domain 2","interpro_id":"IPR004201","interpro_name":"Cdc48_dom2","locations":[{"end":202,"start":140}],"match_end":202,"match_start":140,"name":"CDC48_2"},{"dbname":"CDD","description":"RecA-like_CDC48_r2-like","id":"cd19528","locations":[{"end":657,"start":498}],"match_end":657,"match_start":498,"name":"RecA-like_CDC48_r2-like"},{"dbname":"CDD","description":"RecA-like_CDC48_r1-like","id":"cd19519","locations":[{"end":383,"start":218}],"match_end":383,"match_start":218,"name":"RecA-like_CDC48_r1-like"},{"dbname":"PROSITE_PATTERNS","description":"AAA-protein family signature.","id":"PS00674","interpro_description":"ATPase, AAA-type, conserved site","interpro_id":"IPR003960","interpro_name":"ATPase_AAA_CS","locations":[{"end":372,"start":354},{"end":647,"start":629}],"match_end":647,"match_start":354,"name":"AAA"},{"dbname":"SMART","id":"SM01072","interpro_description":"CDC48, domain 2","interpro_id":"IPR004201","interpro_name":"Cdc48_dom2","locations":[{"end":204,"start":138}],"match_end":204,"match_start":138,"name":"CDC48_2_2"},{"dbname":"SMART","id":"SM01073","interpro_description":"CDC48, N-terminal subdomain","interpro_id":"IPR003338","interpro_name":"CDC4_N-term_subdom","locations":[{"end":121,"start":38}],"match_end":121,"match_start":38,"name":"CDC48_N_2"},{"dbname":"SMART","id":"SM00382","interpro_description":"AAA+ ATPase domain","interpro_id":"IPR003593","interpro_name":"AAA+_ATPase","locations":[{"end":386,"start":250},{"end":661,"start":523}],"match_end":661,"match_start":250,"name":"AAA_5"},{"dbname":"PRINTS","description":"CbxX/CfqX superfamily signature","id":"PR00819","interpro_description":"CbxX/CfxQ","interpro_id":"IPR000641","interpro_name":"CbxX/CfxQ","locations":[{"end":502,"start":488},{"end":541,"start":526},{"end":621,"start":609},{"end":715,"start":703}],"match_end":715,"match_start":488,"name":"CBXCFQXSUPER"},{"dbname":"FUNFAM","description":"Transitional endoplasmic reticulum ATPase","id":"G3DSA:3.40.50.300:FF:000048","locations":[{"end":659,"start":477}],"match_end":659,"match_start":477},{"dbname":"FUNFAM","description":"Cell division control 48","id":"G3DSA:3.10.330.10:FF:000001","locations":[{"end":218,"start":121}],"match_end":218,"match_start":121},{"dbname":"FUNFAM","description":"Transitional endoplasmic reticulum ATPase","id":"G3DSA:2.40.40.20:FF:000003","locations":[{"end":120,"start":16}],"match_end":120,"match_start":16},{"dbname":"FUNFAM","description":"Cell division control 48","id":"G3DSA:1.10.8.60:FF:000004","locations":[{"end":476,"start":385}],"match_end":476,"match_start":385},{"dbname":"FUNFAM","description":"Transitional endoplasmic reticulum ATPase","id":"G3DSA:3.40.50.300:FF:000012","locations":[{"end":383,"start":215}],"match_end":383,"match_start":215},{"dbname":"SUPERFAMILY","id":"SSF54585","interpro_description":"CDC48 domain 2-like superfamily","interpro_id":"IPR029067","interpro_name":"CDC48_domain_2-like_sf","locations":[{"end":211,"start":120}],"match_end":211,"match_start":120,"name":"Cdc48 domain 2-like"},{"dbname":"SUPERFAMILY","id":"SSF50692","interpro_description":"Aspartate decarboxylase-like domain superfamily","interpro_id":"IPR009010","interpro_name":"Asp_de-COase-like_dom_sf","locations":[{"end":118,"start":35}],"match_end":118,"match_start":35,"name":"ADC-like"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":474,"start":213},{"end":772,"start":485}],"match_end":772,"match_start":213,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:2.40.40.20","locations":[{"end":120,"start":15}],"match_end":120,"match_start":15},{"dbname":"GENE3D","id":"G3DSA:1.10.8.60","locations":[{"end":476,"start":385}],"match_end":476,"match_start":385},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":383,"start":219},{"end":659,"start":477}],"match_end":659,"match_start":219},{"dbname":"GENE3D","id":"G3DSA:3.10.330.10","locations":[{"end":218,"start":121}],"match_end":218,"match_start":121},{"dbname":"GENE3D","id":"G3DSA:6.10.20.150","locations":[{"end":772,"start":663}],"match_end":772,"match_start":663},{"dbname":"PANTHER","id":"PTHR23077","interpro_description":"AAA ATPase domain-containing protein","interpro_id":"IPR050168","interpro_name":"AAA_ATPase_domain","locations":[{"end":775,"start":44}],"match_end":775,"match_start":44,"name":"AAA-FAMILY ATPASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":23,"start":1},{"end":742,"start":721}],"match_end":742,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":739,"start":724}],"match_end":739,"match_start":724,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"CDC48 family AAA ATPase","id":"TIGR01243","interpro_description":"AAA ATPase, CDC48 family","interpro_id":"IPR005938","interpro_name":"AAA_ATPase_CDC48","locations":[{"end":774,"start":49}],"match_end":774,"match_start":49,"name":"CDC48"}],"location":{"chromosome_name":"supercont5.2","end_pos":904112,"start_pos":901629,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":108,"start":97}},{"range":{"end":450,"start":440}}],"name":"cdc48","ortholog_annotations":[{"gene_uniquename":"SJAG_03345","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12666","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03345","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1565.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03345","ortholog_taxonid":4932,"ortholog_uniquename":"YDL126C","reference_uniquename":"PMID:29761456"}],"product":"AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0031593"],"not-binding":["GO:0140545","GO:0016887"]}},"subset_termids":["GO:0005783","MONDO:0005336","GO:0030163","GO:0005634","GO:0005739","GO:0006914","GO:0005694","GO:0023052","MONDO:0005559","GO:0005789","GO:0016887","MONDO:0005244","GO:0000226","MONDO:0002039","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0000836":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0016887":null,"GO:0030970":null,"GO:0031593":null,"GO:0032473":null,"GO:0032933":null,"GO:0034098":null,"GO:0036266":null,"GO:0051228":null,"GO:0097352":null,"GO:0140545":null,"GO:0180027":null,"GO:1900039":null,"GO:1990112":null,"GO:1990116":null,"MONDO:0008178":null,"MONDO:0013501":null,"MONDO:0014735":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03345.1"],"transcripts_by_uniquename":{"SJAG_03345.1":null},"uniprot_identifier":"B6K3Z7","uniquename":"SJAG_03345"}


id: SJAG_03346
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101399],"is_not":false,"summary":null,"term":"GO:1900237"},{"annotations":[101400],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[101395],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101396],"is_not":false,"summary":null,"term":"GO:0000792"},{"annotations":[101397],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[101402],"is_not":false,"summary":null,"term":"GO:0001228"},{"annotations":[101404],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[101405],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08205","EnsemblGenomes-Gn:SJAG_03346","UniProtKB/TrEMBL:B6K3Z8"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":94,"start":39}},{"range":{"end":174,"start":145}},{"range":{"end":271,"start":231}},{"range":{"end":396,"start":348}},{"range":{"end":606,"start":529}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ste4","uniquename":"SJAG_03340"},{"name":"utp8","uniquename":"SJAG_03341"},{"name":"spg1","uniquename":"SJAG_03342"},{"name":"knd1","uniquename":"SJAG_05297"},{"name":"cdc48","uniquename":"SJAG_03345"},{"name":"rst2","uniquename":"SJAG_03346"},{"name":"fsv1","uniquename":"SJAG_03347"},{"name":"mvd1","uniquename":"SJAG_03349"},{"name":"mtr4","uniquename":"SJAG_16455"},{"name":"cut9","uniquename":"SJAG_03350"},{"name":"cut23","uniquename":"SJAG_03351"}],"genes_by_uniquename":{"SJAG_03346":null,"SPAC6F12.02":null,"YDR216W":null,"YML081W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"GENE3D","id":"G3DSA:3.30.160.60","locations":[{"end":232,"start":198}],"match_end":232,"match_start":198,"name":"Classic Zinc Finger"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":94,"start":39},{"end":174,"start":145},{"end":271,"start":231},{"end":396,"start":348},{"end":606,"start":529}],"match_end":606,"match_start":39,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":93,"start":79},{"end":388,"start":377},{"end":575,"start":559}],"match_end":575,"match_start":79,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":174,"start":150},{"end":376,"start":351},{"end":587,"start":576}],"match_end":587,"match_start":150,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":252,"start":233}],"match_end":252,"match_start":233,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":907687,"start_pos":905200,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":23,"start":7}},{"range":{"end":104,"start":73}},{"range":{"end":123,"start":109}},{"range":{"end":146,"start":132}},{"range":{"end":202,"start":179}},{"range":{"end":250,"start":242}},{"range":{"end":387,"start":376}},{"range":{"end":417,"start":412}},{"range":{"end":574,"start":558}},{"range":{"end":626,"start":621}}],"name":"rst2","ortholog_annotations":[{"gene_uniquename":"SJAG_03346","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03346","ortholog_taxonid":4932,"ortholog_uniquename":"YDR216W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03346","ortholog_taxonid":4932,"ortholog_uniquename":"YML081W","reference_uniquename":"PMID:29761456"}],"product":"DNA-binding transcription factor, glucose starvation sensing, Rst2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000978","GO:0008270"],"not-binding":["GO:0001228"]}},"subset_termids":["GO:0005694","GO:0000747","GO:0005634","GO:0003700","GO:0006355","GO:0006351","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000792":null,"GO:0000978":null,"GO:0001228":null,"GO:0005634":null,"GO:0005829":null,"GO:0008270":null,"GO:0045944":null,"GO:1900237":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03346.1"],"transcripts_by_uniquename":{"SJAG_03346.1":null},"uniprot_identifier":"B6K3Z8","uniquename":"SJAG_03346"}


id: SJAG_03347
data:
  {"coiled_coil_coords":[{"range":{"end":57,"start":30}},{"range":{"end":85,"start":65}}],"cv_annotations":{"biological_process":[{"annotations":[101411],"is_not":false,"summary":null,"term":"GO:0034058"},{"annotations":[101412],"is_not":false,"summary":null,"term":"GO:0006896"},{"annotations":[101413],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[101414],"is_not":false,"summary":null,"term":"GO:0097576"},{"annotations":[101415],"is_not":false,"summary":null,"term":"GO:0048278"}],"cellular_component":[{"annotations":[101406],"is_not":false,"summary":null,"term":"GO:0000138"},{"annotations":[101408],"is_not":false,"summary":null,"term":"GO:0031902"},{"annotations":[101409],"is_not":false,"summary":null,"term":"GO:0031201"},{"annotations":[101410],"is_not":false,"summary":null,"term":"GO:0005802"}],"molecular_function":[{"annotations":[101416],"is_not":false,"summary":null,"term":"GO:0005484"}]},"dbxrefs":["InterPro:IPR000727","EnsemblGenomes-Gn:SJAG_03347","UniProtKB/TrEMBL:B6K3Z9","EnsemblGenomes-Tr:EEB08206","GOA:B6K3Z9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":125,"start":106}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"utp8","uniquename":"SJAG_03341"},{"name":"spg1","uniquename":"SJAG_03342"},{"name":"knd1","uniquename":"SJAG_05297"},{"name":"cdc48","uniquename":"SJAG_03345"},{"name":"rst2","uniquename":"SJAG_03346"},{"name":"fsv1","uniquename":"SJAG_03347"},{"name":"mvd1","uniquename":"SJAG_03349"},{"name":"mtr4","uniquename":"SJAG_16455"},{"name":"cut9","uniquename":"SJAG_03350"},{"name":"cut23","uniquename":"SJAG_03351"},{"name":"fps1","uniquename":"SJAG_03352"}],"genes_by_uniquename":{"HGNC:11443":null,"SJAG_03347":null,"SPAC6F12.03c":null,"YAL014C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SNARE domain","id":"PF05739","interpro_description":"Target SNARE coiled-coil homology domain","interpro_id":"IPR000727","interpro_name":"T_SNARE_dom","locations":[{"end":262,"start":211}],"match_end":262,"match_start":211,"name":"SNARE"},{"dbname":"CDD","description":"SNARE_SYN8","id":"cd15859","locations":[{"end":244,"start":177}],"match_end":244,"match_start":177,"name":"SNARE_SYN8"},{"dbname":"PROSITE_PROFILES","description":"t-SNARE coiled-coil homology domain profile.","id":"PS50192","interpro_description":"Target SNARE coiled-coil homology domain","interpro_id":"IPR000727","interpro_name":"T_SNARE_dom","locations":[{"end":236,"start":174}],"match_end":236,"match_start":174,"name":"T_SNARE"},{"dbname":"SMART","id":"SM00397","interpro_description":"Target SNARE coiled-coil homology domain","interpro_id":"IPR000727","interpro_name":"T_SNARE_dom","locations":[{"end":236,"start":169}],"match_end":236,"match_start":169,"name":"tSNARE_6"},{"dbname":"SUPERFAMILY","id":"SSF58038","locations":[{"end":236,"start":170}],"match_end":236,"match_start":170,"name":"SNARE fusion complex"},{"dbname":"GENE3D","id":"G3DSA:1.20.5.110","locations":[{"end":238,"start":175}],"match_end":238,"match_start":175},{"dbname":"PANTHER","id":"PTHR19957","interpro_description":"Syntaxin","interpro_id":"IPR045242","interpro_name":"Syntaxin","locations":[{"end":254,"start":17}],"match_end":254,"match_start":17,"name":"SYNTAXIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":57,"start":30},{"end":85,"start":65}],"match_end":85,"match_start":30,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":125,"start":106}],"match_end":125,"match_start":106,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":125,"start":116}],"match_end":125,"match_start":116,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":909095,"start_pos":908307,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":51,"start":35}},{"range":{"end":234,"start":224}},{"range":{"end":259,"start":246}}],"name":"fsv1","ortholog_annotations":[{"gene_uniquename":"SJAG_03347","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11443","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03347","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03347","ortholog_taxonid":4932,"ortholog_uniquename":"YAL014C","reference_uniquename":"PMID:29761456"}],"product":"SNARE Stx8","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0005484"]}},"subset_termids":["GO:0060090","GO:0140056","GO:0016192","GO:0031410","GO:0005794","GO:0005768","GO:0061024"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000138":null,"GO:0005484":null,"GO:0005802":null,"GO:0006886":null,"GO:0006896":null,"GO:0031201":null,"GO:0031902":null,"GO:0034058":null,"GO:0048278":null,"GO:0097576":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":260,"start":243}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03347.1"],"transcripts_by_uniquename":{"SJAG_03347.1":null},"uniprot_identifier":"B6K3Z9","uniquename":"SJAG_03347"}


id: SJAG_03349
data:
  {"coiled_coil_coords":[{"range":{"end":102,"start":82}}],"cv_annotations":{"biological_process":[{"annotations":[96312],"is_not":false,"summary":null,"term":"GO:0010142"},{"annotations":[78955],"is_not":false,"summary":null,"term":"GO:0019287"}],"cellular_component":[{"annotations":[78954],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[96311],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[67004],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[78953],"is_not":false,"summary":null,"term":"GO:0004163"}],"mondo":[{"annotations":[87981],"is_not":false,"summary":null,"term":"MONDO:0013868"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K402","EnsemblGenomes-Gn:SJAG_03349","InterPro:IPR041431","InterPro:IPR006204","InterPro:IPR014721","InterPro:IPR036554","GOA:B6K402","InterPro:IPR005935","InterPro:IPR020568","EnsemblGenomes-Tr:EEB08209","InterPro:IPR029765"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spg1","uniquename":"SJAG_03342"},{"name":"knd1","uniquename":"SJAG_05297"},{"name":"cdc48","uniquename":"SJAG_03345"},{"name":"rst2","uniquename":"SJAG_03346"},{"name":"fsv1","uniquename":"SJAG_03347"},{"name":"mvd1","uniquename":"SJAG_03349"},{"name":"mtr4","uniquename":"SJAG_16455"},{"name":"cut9","uniquename":"SJAG_03350"},{"name":"cut23","uniquename":"SJAG_03351"},{"name":"fps1","uniquename":"SJAG_03352"},{"name":"par2","uniquename":"SJAG_03353"}],"genes_by_uniquename":{"HGNC:7529":null,"SJAG_03349":null,"SPAC24C9.03":null,"YNR043W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mevalonate 5-diphosphate decarboxylase C-terminal domain","id":"PF18376","interpro_description":"Mvd1, C-terminal","interpro_id":"IPR041431","interpro_name":"Mvd1_C","locations":[{"end":379,"start":197}],"match_end":379,"match_start":197,"name":"MDD_C"},{"dbname":"PFAM","description":"Diphosphomevalonate decarboxylase-like N-terminal domain","id":"PF22700","interpro_description":"Diphosphomevalonate decarboxylase-like N-terminal domain","interpro_id":"IPR053859","interpro_name":"MVD-like_N","locations":[{"end":183,"start":12}],"match_end":183,"match_start":12,"name":"MVD-like_N"},{"dbname":"FUNFAM","description":"Diphosphomevalonate decarboxylase","id":"G3DSA:3.30.70.890:FF:000005","locations":[{"end":378,"start":188}],"match_end":378,"match_start":188},{"dbname":"FUNFAM","description":"Diphosphomevalonate decarboxylase","id":"G3DSA:3.30.230.10:FF:000018","locations":[{"end":187,"start":8}],"match_end":187,"match_start":8},{"dbname":"SUPERFAMILY","id":"SSF54211","interpro_description":"Ribosomal protein uS5 domain 2-type superfamily","interpro_id":"IPR020568","interpro_name":"Ribosomal_Su5_D2-typ_SF","locations":[{"end":193,"start":8}],"match_end":193,"match_start":8,"name":"Ribosomal protein S5 domain 2-like"},{"dbname":"SUPERFAMILY","id":"SSF55060","interpro_description":"GHMP kinase, C-terminal domain superfamily","interpro_id":"IPR036554","interpro_name":"GHMP_kinase_C_sf","locations":[{"end":390,"start":194}],"match_end":390,"match_start":194,"name":"GHMP Kinase, C-terminal domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.890","interpro_description":"GHMP kinase, C-terminal domain superfamily","interpro_id":"IPR036554","interpro_name":"GHMP_kinase_C_sf","locations":[{"end":377,"start":188}],"match_end":377,"match_start":188},{"dbname":"GENE3D","id":"G3DSA:3.30.230.10","interpro_description":"Small ribosomal subunit protein uS5 domain 2-type fold, subgroup","interpro_id":"IPR014721","interpro_name":"Ribsml_uS5_D2-typ_fold_subgr","locations":[{"end":187,"start":11}],"match_end":187,"match_start":11},{"dbname":"PANTHER","id":"PTHR10977","locations":[{"end":393,"start":3}],"match_end":393,"match_start":3,"name":"DIPHOSPHOMEVALONATE DECARBOXYLASE"},{"dbname":"PIRSF","id":"PIRSF015950","interpro_description":"Diphosphomevalonate/phosphomevalonate decarboxylase","interpro_id":"IPR005935","interpro_name":"Mev_decarb","locations":[{"end":386,"start":1}],"match_end":386,"match_start":1,"name":"Mev_P_decrbx"},{"dbname":"COILS","id":"Coil","locations":[{"end":102,"start":82}],"match_end":102,"match_start":82,"name":"Coil"},{"dbname":"NCBIFAM","description":"diphosphomevalonate decarboxylase","id":"TIGR01240","interpro_description":"Diphosphomevalonate decarboxylase","interpro_id":"IPR029765","interpro_name":"Mev_diP_decarb","locations":[{"end":324,"start":9}],"match_end":324,"match_start":9,"name":"mevDPdecarb"}],"location":{"chromosome_name":"supercont5.2","end_pos":910663,"start_pos":909479,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":137,"start":117}}],"name":"mvd1","ortholog_annotations":[{"gene_uniquename":"SJAG_03349","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7529","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03349","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC24C9.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03349","ortholog_taxonid":4932,"ortholog_uniquename":"YNR043W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03349","ortholog_taxonid":4932,"ortholog_uniquename":"YNR043W","reference_uniquename":"PMID:26896847"}],"product":"diphosphomevalonate decarboxylase mvd1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004163"]}},"subset_termids":["GO:0006629","GO:0005829","GO:0006790","GO:0005634","MONDO:0005093","GO:0055086","GO:0016829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004163":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0010142":null,"GO:0019287":null,"MONDO:0013868":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03349.1"],"transcripts_by_uniquename":{"SJAG_03349.1":null},"uniprot_identifier":"B6K402","uniquename":"SJAG_03349"}


id: SJAG_03350
data:
  {"cv_annotations":{"biological_process":[{"annotations":[80799],"is_not":false,"summary":null,"term":"GO:0031145"},{"annotations":[101508],"is_not":false,"summary":null,"term":"GO:1901970"}],"cellular_component":[{"annotations":[80798],"is_not":false,"summary":null,"term":"GO:0005680"},{"annotations":[101505],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101506],"is_not":false,"summary":null,"term":"GO:0005721"}]},"dbxrefs":["InterPro:IPR019734","UniProtKB/TrEMBL:B6K403","GOA:B6K403","InterPro:IPR013026","EnsemblGenomes-Gn:SJAG_03350","InterPro:IPR011990","EnsemblGenomes-Tr:EEB08210"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":21,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cdc48","uniquename":"SJAG_03345"},{"name":"rst2","uniquename":"SJAG_03346"},{"name":"fsv1","uniquename":"SJAG_03347"},{"name":"mvd1","uniquename":"SJAG_03349"},{"name":"mtr4","uniquename":"SJAG_16455"},{"name":"cut9","uniquename":"SJAG_03350"},{"name":"cut23","uniquename":"SJAG_03351"},{"name":"fps1","uniquename":"SJAG_03352"},{"name":"par2","uniquename":"SJAG_03353"},{"name":"sfc1","uniquename":"SJAG_03354"},{"name":"ade3","uniquename":"SJAG_03355"}],"genes_by_uniquename":{"HGNC:1720":null,"SJAG_03350":null,"SPAC6F12.15c":null,"YKL022C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Tetratricopeptide repeat","id":"PF13424","locations":[{"end":546,"start":480}],"match_end":546,"match_start":480,"name":"TPR_12"},{"dbname":"PFAM","description":"Anaphase-promoting complex, cyclosome, subunit 3","id":"PF12895","locations":[{"end":178,"start":99}],"match_end":178,"match_start":99,"name":"ANAPC3"},{"dbname":"PFAM","description":"Tetratricopeptide repeat","id":"PF13181","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":234,"start":203}],"match_end":234,"match_start":203,"name":"TPR_8"},{"dbname":"PROSITE_PROFILES","description":"TPR repeat profile.","id":"PS50005","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":236,"start":203},{"end":409,"start":376},{"end":511,"start":478},{"end":552,"start":519}],"match_end":552,"match_start":203,"name":"TPR"},{"dbname":"SMART","id":"SM00028","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":236,"start":203},{"end":341,"start":308},{"end":511,"start":376},{"end":586,"start":519}],"match_end":586,"match_start":203,"name":"tpr_5"},{"dbname":"SUPERFAMILY","id":"SSF48452","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":169,"start":98},{"end":244,"start":209}],"match_end":244,"match_start":98,"name":"TPR-like"},{"dbname":"SUPERFAMILY","id":"SSF81901","locations":[{"end":585,"start":206}],"match_end":585,"match_start":206,"name":"HCP-like"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":600,"start":45}],"match_end":600,"match_start":45,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR12558","locations":[{"end":588,"start":91}],"match_end":588,"match_start":91,"name":"CELL DIVISION CYCLE 16,23,27"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":21,"start":1}],"match_end":21,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":21,"start":12}],"match_end":21,"match_start":12,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":917726,"start_pos":915533,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":624,"start":615}}],"name":"cut9","ortholog_annotations":[{"gene_uniquename":"SJAG_03350","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1720","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03350","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03350","ortholog_taxonid":4932,"ortholog_uniquename":"YKL022C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03350","ortholog_taxonid":4932,"ortholog_uniquename":"YKL022C","reference_uniquename":"PMID:26896847"}],"product":"anaphase-promoting complex TPR lobe subcomplex subunit Cut9/Apc6","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005694","GO:0005829","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005680":null,"GO:0005721":null,"GO:0005829":null,"GO:0031145":null,"GO:1901970":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03350.1"],"transcripts_by_uniquename":{"SJAG_03350.1":null},"uniprot_identifier":"B6K403","uniquename":"SJAG_03350"}


id: SJAG_03351
data:
  {"alleles_by_uniquename":{"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"}},"coiled_coil_coords":[{"range":{"end":562,"start":542}}],"cv_annotations":{"biological_process":[{"annotations":[71841],"is_not":false,"summary":null,"term":"GO:0031145"},{"annotations":[101503],"is_not":false,"summary":null,"term":"GO:1901970"}],"cellular_component":[{"annotations":[71840],"is_not":false,"summary":null,"term":"GO:0005680"},{"annotations":[101500],"is_not":false,"summary":null,"term":"GO:0044732"}],"single_locus_phenotype":[{"annotations":[121319],"is_not":false,"summary":null,"term":"FYPO:0000618"},{"annotations":[121329],"is_not":false,"summary":null,"term":"FYPO:0001327"},{"annotations":[121316],"is_not":false,"summary":null,"term":"FYPO:0001387"},{"annotations":[121313],"is_not":false,"summary":null,"term":"FYPO:0000324"}]},"dbxrefs":["GOA:B6K404","EnsemblGenomes-Gn:SJAG_03351","EnsemblGenomes-Tr:EEB08211","UniProtKB/TrEMBL:B6K404","InterPro:IPR013026","InterPro:IPR019734","InterPro:IPR007192","InterPro:IPR011990"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:23786411","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rst2","uniquename":"SJAG_03346"},{"name":"fsv1","uniquename":"SJAG_03347"},{"name":"mvd1","uniquename":"SJAG_03349"},{"name":"mtr4","uniquename":"SJAG_16455"},{"name":"cut9","uniquename":"SJAG_03350"},{"name":"cut23","uniquename":"SJAG_03351"},{"name":"fps1","uniquename":"SJAG_03352"},{"name":"par2","uniquename":"SJAG_03353"},{"name":"sfc1","uniquename":"SJAG_03354"},{"name":"ade3","uniquename":"SJAG_03355"},{"name":"rdp1","uniquename":"SJAG_03356"}],"genes_by_uniquename":{"HGNC:1724":null,"SJAG_03198":null,"SJAG_03351":null,"SPAC6F12.14":null,"YHR166C":null},"genotypes_by_uniquename":{"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Tetratricopeptide repeat","id":"PF13181","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":364,"start":333},{"end":398,"start":368},{"end":499,"start":469}],"match_end":499,"match_start":333,"name":"TPR_8"},{"dbname":"PFAM","description":"Anaphase promoting complex subunit 8 / Cdc23","id":"PF04049","interpro_description":"Cdc23","interpro_id":"IPR007192","interpro_name":"APC8","locations":[{"end":271,"start":16}],"match_end":271,"match_start":16,"name":"ANAPC8"},{"dbname":"PFAM","description":"Tetratricopeptide repeat","id":"PF13176","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":461,"start":437}],"match_end":461,"match_start":437,"name":"TPR_7"},{"dbname":"PROSITE_PROFILES","description":"TPR repeat profile.","id":"PS50005","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":467,"start":332}],"match_end":467,"match_start":332,"name":"TPR"},{"dbname":"SMART","id":"SM00028","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":200,"start":167},{"end":297,"start":264},{"end":501,"start":332}],"match_end":501,"match_start":167,"name":"tpr_5"},{"dbname":"SUPERFAMILY","id":"SSF48452","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":105,"start":85},{"end":204,"start":158},{"end":296,"start":247},{"end":536,"start":333}],"match_end":536,"match_start":85,"name":"TPR-like"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":555,"start":13}],"match_end":555,"match_start":13,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR12558","locations":[{"end":541,"start":65}],"match_end":541,"match_start":65,"name":"CELL DIVISION CYCLE 16,23,27"},{"dbname":"COILS","id":"Coil","locations":[{"end":562,"start":542}],"match_end":562,"match_start":542,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":919764,"start_pos":917952,"strand":"reverse"},"name":"cut23","ortholog_annotations":[{"gene_uniquename":"SJAG_03351","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1724","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03351","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03351","ortholog_taxonid":4932,"ortholog_uniquename":"YHR166C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03351","ortholog_taxonid":4932,"ortholog_uniquename":"YHR166C","reference_uniquename":"PMID:26896847"}],"product":"anaphase-promoting complex TPR lobe subcomplex subunit Apc8","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:23786411":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"single_locus_phenotype":{"cell_phenotype":["FYPO:0001327","FYPO:0000324","FYPO:0000618"],"population_phenotype":["FYPO:0001387"]}},"subset_termids":["FYPO:0006551","GO:0005634","FYPO:0000631","FYPO:0001320","GO:0015630","GO:0005816","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0000324":null,"FYPO:0000618":null,"FYPO:0001327":null,"FYPO:0001387":null,"GO:0005680":null,"GO:0031145":null,"GO:0044732":null,"GO:1901970":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03351.1"],"transcripts_by_uniquename":{"SJAG_03351.1":null},"uniprot_identifier":"B6K404","uniquename":"SJAG_03351"}


id: SJAG_03352
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101495],"is_not":false,"summary":null,"term":"GO:0010142"},{"annotations":[101496],"is_not":false,"summary":null,"term":"GO:0033386"}],"cellular_component":[{"annotations":[101492],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101493],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[101494],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[69264],"is_not":false,"summary":null,"term":"GO:0004337"},{"annotations":[101498],"is_not":false,"summary":null,"term":"GO:0004311"}],"mondo":[{"annotations":[87843],"is_not":false,"summary":null,"term":"MONDO:0014713"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03352","InterPro:IPR000092","UniProtKB/TrEMBL:B6K405","GOA:B6K405","EnsemblGenomes-Tr:EEB08212","InterPro:IPR008949","InterPro:IPR039702","InterPro:IPR033749"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fsv1","uniquename":"SJAG_03347"},{"name":"mvd1","uniquename":"SJAG_03349"},{"name":"mtr4","uniquename":"SJAG_16455"},{"name":"cut9","uniquename":"SJAG_03350"},{"name":"cut23","uniquename":"SJAG_03351"},{"name":"fps1","uniquename":"SJAG_03352"},{"name":"par2","uniquename":"SJAG_03353"},{"name":"sfc1","uniquename":"SJAG_03354"},{"name":"ade3","uniquename":"SJAG_03355"},{"name":"rdp1","uniquename":"SJAG_03356"},{"name":"exo8","uniquename":"SJAG_03357"}],"genes_by_uniquename":{"HGNC:3631":null,"SJAG_03352":null,"SPAC6F12.13c":null,"YJL167W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Polyprenyl synthetase","id":"PF00348","interpro_description":"Polyprenyl synthetase-like","interpro_id":"IPR000092","interpro_name":"Polyprenyl_synt","locations":[{"end":306,"start":43}],"match_end":306,"match_start":43,"name":"polyprenyl_synt"},{"dbname":"CDD","description":"Trans_IPPS_HT","id":"cd00685","interpro_description":"Polyprenyl synthetase-like","interpro_id":"IPR000092","interpro_name":"Polyprenyl_synt","locations":[{"end":274,"start":43}],"match_end":274,"match_start":43,"name":"Trans_IPPS_HT"},{"dbname":"PROSITE_PATTERNS","description":"Polyprenyl synthases signature 2.","id":"PS00444","interpro_description":"Polyprenyl synthetase, conserved site","interpro_id":"IPR033749","interpro_name":"Polyprenyl_synt_CS","locations":[{"end":246,"start":234}],"match_end":246,"match_start":234,"name":"POLYPRENYL_SYNTHASE_2"},{"dbname":"PROSITE_PATTERNS","description":"Polyprenyl synthases signature 1.","id":"PS00723","interpro_description":"Polyprenyl synthetase, conserved site","interpro_id":"IPR033749","interpro_name":"Polyprenyl_synt_CS","locations":[{"end":113,"start":99}],"match_end":113,"match_start":99,"name":"POLYPRENYL_SYNTHASE_1"},{"dbname":"FUNFAM","description":"Farnesyl pyrophosphate synthase","id":"G3DSA:1.10.600.10:FF:000006","locations":[{"end":353,"start":4}],"match_end":353,"match_start":4},{"dbname":"SUPERFAMILY","id":"SSF48576","interpro_description":"Isoprenoid synthase domain superfamily","interpro_id":"IPR008949","interpro_name":"Isoprenoid_synthase_dom_sf","locations":[{"end":353,"start":12}],"match_end":353,"match_start":12,"name":"Terpenoid synthases"},{"dbname":"GENE3D","id":"G3DSA:1.10.600.10","interpro_description":"Isoprenoid synthase domain superfamily","interpro_id":"IPR008949","interpro_name":"Isoprenoid_synthase_dom_sf","locations":[{"end":353,"start":2}],"match_end":353,"match_start":2,"name":"Farnesyl Diphosphate Synthase"},{"dbname":"PANTHER","id":"PTHR11525","interpro_description":"Farnesyl pyrophosphate synthase-like","interpro_id":"IPR039702","interpro_name":"FPS1-like","locations":[{"end":354,"start":10}],"match_end":354,"match_start":10,"name":"FARNESYL-PYROPHOSPHATE SYNTHETASE"},{"dbname":"SFLD","description":"Isoprenoid Synthase Type I","id":"SFLDS00005","locations":[{"end":352,"start":32}],"match_end":352,"match_start":32,"name":"Isoprenoid_Synthase_Type_I"},{"dbname":"SFLD","description":"Polyprenyl Transferase Like","id":"SFLDG01017","locations":[{"end":352,"start":32}],"match_end":352,"match_start":32,"name":"Polyprenyl_Transferase_Like"}],"location":{"chromosome_name":"supercont5.2","end_pos":921418,"start_pos":920089,"strand":"forward"},"name":"fps1","ortholog_annotations":[{"gene_uniquename":"SJAG_03352","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3631","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03352","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03352","ortholog_taxonid":4932,"ortholog_uniquename":"YJL167W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03352","ortholog_taxonid":4932,"ortholog_uniquename":"YJL167W","reference_uniquename":"PMID:26896847"}],"product":"farnesyltranstransferase/ geranyltranstransferase Fps1","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004311","GO:0004337"]}},"subset_termids":["GO:0016765","GO:0005829","GO:0005634","GO:0005783","GO:0006629","MONDO:0005093"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004311":null,"GO:0004337":null,"GO:0005634":null,"GO:0005783":null,"GO:0005829":null,"GO:0010142":null,"GO:0033386":null,"MONDO:0014713":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03352.1"],"transcripts_by_uniquename":{"SJAG_03352.1":null},"uniprot_identifier":"B6K405","uniquename":"SJAG_03352"}


id: SJAG_03353
data:
  {"coiled_coil_coords":[{"range":{"end":604,"start":584}}],"cv_annotations":{"biological_process":[{"annotations":[101488],"is_not":false,"summary":null,"term":"GO:1902426"},{"annotations":[66080],"is_not":false,"summary":null,"term":"GO:0051754"},{"annotations":[101490],"is_not":false,"summary":null,"term":"GO:0031030"}],"cellular_component":[{"annotations":[101485],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[101486],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[66076],"is_not":false,"summary":null,"term":"GO:0000776"},{"annotations":[66071],"is_not":false,"summary":null,"term":"GO:0000159"}],"molecular_function":[{"annotations":[78297],"is_not":false,"summary":null,"term":"GO:0072542"}],"mondo":[{"annotations":[87112],"is_not":false,"summary":null,"term":"MONDO:0014602"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08213","InterPro:IPR011989","EnsemblGenomes-Gn:SJAG_03353","InterPro:IPR002554","GOA:B6K406","InterPro:IPR016024","UniProtKB/TrEMBL:B6K406"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":128,"start":1}},{"range":{"end":174,"start":140}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mvd1","uniquename":"SJAG_03349"},{"name":"mtr4","uniquename":"SJAG_16455"},{"name":"cut9","uniquename":"SJAG_03350"},{"name":"cut23","uniquename":"SJAG_03351"},{"name":"fps1","uniquename":"SJAG_03352"},{"name":"par2","uniquename":"SJAG_03353"},{"name":"sfc1","uniquename":"SJAG_03354"},{"name":"ade3","uniquename":"SJAG_03355"},{"name":"rdp1","uniquename":"SJAG_03356"},{"name":"exo8","uniquename":"SJAG_03357"},{"name":"tom20","uniquename":"SJAG_03358"}],"genes_by_uniquename":{"HGNC:9309":null,"HGNC:9310":null,"HGNC:9311":null,"HGNC:9312":null,"HGNC:9313":null,"SJAG_03353":null,"SPAC6F12.12":null,"YOR014W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein phosphatase 2A regulatory B subunit (B56 family)","id":"PF01603","interpro_description":"Protein phosphatase 2A, regulatory B subunit, B56","interpro_id":"IPR002554","interpro_name":"PP2A_B56","locations":[{"end":594,"start":185}],"match_end":594,"match_start":185,"name":"B56"},{"dbname":"FUNFAM","description":"Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit","id":"G3DSA:1.25.10.10:FF:000016","locations":[{"end":593,"start":192}],"match_end":593,"match_start":192},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":576,"start":197}],"match_end":576,"match_start":197,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":593,"start":193}],"match_end":593,"match_start":193},{"dbname":"PANTHER","id":"PTHR10257","interpro_description":"Protein phosphatase 2A, regulatory B subunit, B56","interpro_id":"IPR002554","interpro_name":"PP2A_B56","locations":[{"end":597,"start":71}],"match_end":597,"match_start":71,"name":"SERINE/THREONINE PROTEIN PHOSPHATASE 2A  PP2A  REGULATORY SUBUNIT B"},{"dbname":"PIRSF","id":"PIRSF028043","interpro_description":"Protein phosphatase 2A, regulatory B subunit, B56","interpro_id":"IPR002554","interpro_name":"PP2A_B56","locations":[{"end":621,"start":5}],"match_end":621,"match_start":5,"name":"PP2A_B56"},{"dbname":"COILS","id":"Coil","locations":[{"end":604,"start":584}],"match_end":604,"match_start":584,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":128,"start":1},{"end":174,"start":140}],"match_end":174,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":113,"start":91}],"match_end":113,"match_start":91,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":57,"start":33},{"end":90,"start":70}],"match_end":90,"match_start":33,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":923805,"start_pos":921694,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":27,"start":14}},{"range":{"end":72,"start":36}},{"range":{"end":112,"start":88}}],"name":"par2","ortholog_annotations":[{"gene_uniquename":"SJAG_03353","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9309","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03353","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9310","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03353","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9311","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03353","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9312","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03353","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9313","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03353","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03353","ortholog_taxonid":4932,"ortholog_uniquename":"YOR014W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03353","ortholog_taxonid":4932,"ortholog_uniquename":"YOR014W","reference_uniquename":"PMID:26896847"}],"product":"serine/threonine protein phosphatase PP2A regulatory subunit B-56 Par2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0072542"]}},"subset_termids":["GO:0098772","GO:0000070","GO:0005694","GO:0023052","GO:0044772","MONDO:0000426","GO:0030234","GO:0000776","MONDO:0002320"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000159":null,"GO:0000776":null,"GO:0031030":null,"GO:0032153":null,"GO:0051286":null,"GO:0051754":null,"GO:0072542":null,"GO:1902426":null,"MONDO:0014602":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03353.1"],"transcripts_by_uniquename":{"SJAG_03353.1":null},"uniprot_identifier":"B6K406","uniquename":"SJAG_03353"}


id: SJAG_03354
data:
  {"coiled_coil_coords":[{"range":{"end":445,"start":425}}],"cv_annotations":{"biological_process":[{"annotations":[56994],"is_not":false,"summary":null,"term":"GO:0006384"}],"cellular_component":[{"annotations":[101476],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101477],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[71561],"is_not":false,"summary":null,"term":"GO:0000127"}],"molecular_function":[{"annotations":[101480],"is_not":false,"summary":null,"term":"GO:0043035"},{"annotations":[101482],"is_not":false,"summary":null,"term":"GO:0000995"},{"annotations":[71562],"is_not":false,"summary":null,"term":"GO:0001002"},{"annotations":[71563],"is_not":false,"summary":null,"term":"GO:0001003"}]},"dbxrefs":["InterPro:IPR041499","InterPro:IPR019136","EnsemblGenomes-Tr:EEB08214","GOA:B6K407","UniProtKB/TrEMBL:B6K407","EnsemblGenomes-Gn:SJAG_03354","InterPro:IPR040454","InterPro:IPR042536"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":418,"start":387}},{"range":{"end":457,"start":431}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mtr4","uniquename":"SJAG_16455"},{"name":"cut9","uniquename":"SJAG_03350"},{"name":"cut23","uniquename":"SJAG_03351"},{"name":"fps1","uniquename":"SJAG_03352"},{"name":"par2","uniquename":"SJAG_03353"},{"name":"sfc1","uniquename":"SJAG_03354"},{"name":"ade3","uniquename":"SJAG_03355"},{"name":"rdp1","uniquename":"SJAG_03356"},{"name":"exo8","uniquename":"SJAG_03357"},{"name":"tom20","uniquename":"SJAG_03358"},{"name":"shc1","uniquename":"SJAG_03360"}],"genes_by_uniquename":{"HGNC:4668":null,"SJAG_03354":null,"SPAC6F12.11c":null,"YBR123C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Tau95 Triple barrel domain","id":"PF17682","interpro_description":"Transcription factor IIIC subunit Tfc1/Sfc1, triple barrel domain","interpro_id":"IPR041499","interpro_name":"Tfc1/Sfc1_N","locations":[{"end":108,"start":12}],"match_end":108,"match_start":12,"name":"Tau95_N"},{"dbname":"PFAM","description":"RNA polymerase III transcription factor (TF)IIIC subunit HTH domain","id":"PF09734","interpro_description":"Transcription factor IIIC subunit 5, HTH domain","interpro_id":"IPR019136","interpro_name":"TF_IIIC_su-5_HTH","locations":[{"end":295,"start":148}],"match_end":295,"match_start":148,"name":"Tau95"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.160","interpro_description":"TFIIIC, subcomplex tauA subunit Sfc1, triple barrel domain superfamily","interpro_id":"IPR042536","interpro_name":"TFIIIC_tauA_Sfc1","locations":[{"end":110,"start":1}],"match_end":110,"match_start":1,"name":"TFIIIC, subcomplex tauA, subunit Sfc1, barrel domain"},{"dbname":"PANTHER","id":"PTHR13230","interpro_description":"Transcription factor IIIC subunit Tfc1/Sfc1","interpro_id":"IPR040454","interpro_name":"TF_IIIC_Tfc1/Sfc1","locations":[{"end":449,"start":6}],"match_end":449,"match_start":6,"name":"GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5"},{"dbname":"COILS","id":"Coil","locations":[{"end":445,"start":425}],"match_end":445,"match_start":425,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":418,"start":387},{"end":457,"start":431}],"match_end":457,"match_start":387,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":457,"start":440}],"match_end":457,"match_start":440,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":418,"start":405}],"match_end":418,"match_start":405,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":399,"start":389}],"match_end":399,"match_start":389,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":925814,"start_pos":924220,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":454,"start":439}}],"name":"sfc1","ortholog_annotations":[{"gene_uniquename":"SJAG_03354","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4668","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03354","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03354","ortholog_taxonid":4932,"ortholog_uniquename":"YBR123C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03354","ortholog_taxonid":4932,"ortholog_uniquename":"YBR123C","reference_uniquename":"PMID:26896847"}],"product":"transcription factor TFIIIC complex A box associated subunit Sfc1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0001002","GO:0001003","GO:0043035"],"not-binding":["GO:0000995"]}},"subset_termids":["GO:0006351","GO:0005829","GO:0140223","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000127":null,"GO:0000995":null,"GO:0001002":null,"GO:0001003":null,"GO:0005634":null,"GO:0005829":null,"GO:0006384":null,"GO:0043035":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03354.1"],"transcripts_by_uniquename":{"SJAG_03354.1":null},"uniprot_identifier":"B6K407","uniquename":"SJAG_03354"}


id: SJAG_03355
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":1158,"start":1158}},{"assigned_by":"UniProtKB","range":{"end":1286,"start":1286}},{"assigned_by":"UniProtKB","range":{"end":1288,"start":1288}}],"cv_annotations":{"biological_process":[{"annotations":[57122],"is_not":false,"summary":null,"term":"GO:0006189"},{"annotations":[101472],"is_not":false,"summary":null,"term":"GO:1904262"}],"cellular_component":[{"annotations":[101469],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[101470],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[57120],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[71635],"is_not":false,"summary":null,"term":"GO:0004642"}]},"dbxrefs":["GOA:B6K408","InterPro:IPR017926","InterPro:IPR036676","InterPro:IPR029062","InterPro:IPR036921","InterPro:IPR040707","InterPro:IPR036604","InterPro:IPR010918","InterPro:IPR041609","InterPro:IPR010073","EnsemblGenomes-Tr:EEB08215","UniProtKB/TrEMBL:B6K408","EnsemblGenomes-Gn:SJAG_03355"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cut9","uniquename":"SJAG_03350"},{"name":"cut23","uniquename":"SJAG_03351"},{"name":"fps1","uniquename":"SJAG_03352"},{"name":"par2","uniquename":"SJAG_03353"},{"name":"sfc1","uniquename":"SJAG_03354"},{"name":"ade3","uniquename":"SJAG_03355"},{"name":"rdp1","uniquename":"SJAG_03356"},{"name":"exo8","uniquename":"SJAG_03357"},{"name":"tom20","uniquename":"SJAG_03358"},{"name":"shc1","uniquename":"SJAG_03360"},{"name":"rdi1","uniquename":"SJAG_03361"}],"genes_by_uniquename":{"HGNC:8863":null,"SJAG_03355":null,"SPAC6F12.10c":null,"YGR061C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Formylglycinamide ribonucleotide amidotransferase N-terminal","id":"PF18076","interpro_description":"Phosphoribosylformylglycinamidine synthase, N-terminal","interpro_id":"IPR040707","interpro_name":"FGAR-AT_N","locations":[{"end":147,"start":35}],"match_end":147,"match_start":35,"name":"FGAR-AT_N"},{"dbname":"PFAM","description":"CobB/CobQ-like glutamine amidotransferase domain","id":"PF13507","locations":[{"end":1323,"start":1061}],"match_end":1323,"match_start":1061,"name":"GATase_5"},{"dbname":"PFAM","description":"Formylglycinamide ribonucleotide amidotransferase linker domain","id":"PF18072","interpro_description":"Phosphoribosylformylglycinamidine synthase, linker domain","interpro_id":"IPR041609","interpro_name":"PurL_linker","locations":[{"end":229,"start":176}],"match_end":229,"match_start":176,"name":"FGAR-AT_linker"},{"dbname":"PFAM","description":"FGAR-AT PurM_N-like domain","id":"PF22689","interpro_description":"FGAR-AT, PurM N-terminal-like domain","interpro_id":"IPR055181","interpro_name":"FGAR-AT_PurM_N-like","locations":[{"end":826,"start":665}],"match_end":826,"match_start":665,"name":"FGAR-AT_PurM_N-like"},{"dbname":"PFAM","description":"AIR synthase related protein, C-terminal domain","id":"PF02769","interpro_description":"PurM-like, C-terminal domain","interpro_id":"IPR010918","interpro_name":"PurM-like_C_dom","locations":[{"end":593,"start":440},{"end":985,"start":856}],"match_end":985,"match_start":440,"name":"AIRS_C"},{"dbname":"CDD","description":"PurL_repeat1","id":"cd02203","locations":[{"end":607,"start":214}],"match_end":607,"match_start":214,"name":"PurL_repeat1"},{"dbname":"CDD","description":"GATase1_FGAR_AT","id":"cd01740","locations":[{"end":1318,"start":1064}],"match_end":1318,"match_start":1064,"name":"GATase1_FGAR_AT"},{"dbname":"CDD","description":"PurL_repeat2","id":"cd02204","locations":[{"end":981,"start":696}],"match_end":981,"match_start":696,"name":"PurL_repeat2"},{"dbname":"PROSITE_PROFILES","description":"Glutamine amidotransferase type 1 domain profile.","id":"PS51273","locations":[{"end":1305,"start":1064}],"match_end":1305,"match_start":1064,"name":"GATASE_TYPE_1"},{"dbname":"SMART","id":"SM01211","locations":[{"end":1324,"start":1061}],"match_end":1324,"match_start":1061,"name":"GATase_5_2"},{"dbname":"FUNFAM","description":"Phosphoribosylformylglycinamidine synthase","id":"G3DSA:3.90.650.10:FF:000005","locations":[{"end":1003,"start":828}],"match_end":1003,"match_start":828},{"dbname":"FUNFAM","description":"Phosphoribosylformylglycinamidine synthase","id":"G3DSA:3.30.1330.10:FF:000005","locations":[{"end":826,"start":638}],"match_end":826,"match_start":638},{"dbname":"FUNFAM","description":"Phosphoribosylformylglycinamidine synthase","id":"G3DSA:3.90.650.10:FF:000002","locations":[{"end":613,"start":429}],"match_end":613,"match_start":429},{"dbname":"FUNFAM","description":"Phosphoribosylformylglycinamidine synthase","id":"G3DSA:3.30.1330.10:FF:000002","locations":[{"end":428,"start":223}],"match_end":428,"match_start":223},{"dbname":"FUNFAM","description":"Phosphoribosylformylglycinamidine synthase","id":"G3DSA:3.40.50.880:FF:000008","locations":[{"end":1325,"start":1004}],"match_end":1325,"match_start":1004},{"dbname":"SUPERFAMILY","id":"SSF52317","interpro_description":"Class I glutamine amidotransferase-like","interpro_id":"IPR029062","interpro_name":"Class_I_gatase-like","locations":[{"end":1321,"start":1059}],"match_end":1321,"match_start":1059,"name":"Class I glutamine amidotransferase-like"},{"dbname":"SUPERFAMILY","id":"SSF109736","locations":[{"end":229,"start":172}],"match_end":229,"match_start":172,"name":"FGAM synthase PurL, linker domain"},{"dbname":"SUPERFAMILY","id":"SSF55326","interpro_description":"PurM-like, N-terminal domain superfamily","interpro_id":"IPR036921","interpro_name":"PurM-like_N_sf","locations":[{"end":432,"start":230},{"end":835,"start":647}],"match_end":835,"match_start":230,"name":"PurM N-terminal domain-like"},{"dbname":"SUPERFAMILY","id":"SSF56042","interpro_description":"PurM-like, C-terminal domain superfamily","interpro_id":"IPR036676","interpro_name":"PurM-like_C_sf","locations":[{"end":621,"start":439},{"end":1048,"start":847}],"match_end":1048,"match_start":439,"name":"PurM C-terminal domain-like"},{"dbname":"SUPERFAMILY","id":"SSF82697","interpro_description":"Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily","interpro_id":"IPR036604","interpro_name":"PurS-like_sf","locations":[{"end":148,"start":1}],"match_end":148,"match_start":1,"name":"PurS-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.1330.10","interpro_description":"PurM-like, N-terminal domain superfamily","interpro_id":"IPR036921","interpro_name":"PurM-like_N_sf","locations":[{"end":427,"start":223},{"end":827,"start":638}],"match_end":827,"match_start":223},{"dbname":"GENE3D","id":"G3DSA:3.40.50.880","interpro_description":"Class I glutamine amidotransferase-like","interpro_id":"IPR029062","interpro_name":"Class_I_gatase-like","locations":[{"end":1324,"start":1004}],"match_end":1324,"match_start":1004},{"dbname":"GENE3D","id":"G3DSA:1.10.8.750","locations":[{"end":222,"start":150}],"match_end":222,"match_start":150,"name":"Phosphoribosylformylglycinamidine synthase, linker domain"},{"dbname":"GENE3D","id":"G3DSA:3.90.650.10","interpro_description":"PurM-like, C-terminal domain superfamily","interpro_id":"IPR036676","interpro_name":"PurM-like_C_sf","locations":[{"end":613,"start":428},{"end":1003,"start":843}],"match_end":1003,"match_start":428},{"dbname":"PANTHER","id":"PTHR10099","locations":[{"end":1323,"start":2}],"match_end":1323,"match_start":2,"name":"PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE"},{"dbname":"HAMAP","description":"Phosphoribosylformylglycinamidine synthase [purL].","id":"MF_00419","interpro_description":"Phosphoribosylformylglycinamidine synthase PurL","interpro_id":"IPR010073","interpro_name":"PurL_large","locations":[{"end":1325,"start":1}],"match_end":1325,"match_start":1,"name":"PurL_1"},{"dbname":"NCBIFAM","description":"phosphoribosylformylglycinamidine synthase","id":"NF003672","locations":[{"end":1322,"start":2}],"match_end":1322,"match_start":2,"name":"PRK05297.1"},{"dbname":"NCBIFAM","description":"phosphoribosylformylglycinamidine synthase","id":"TIGR01735","interpro_description":"Phosphoribosylformylglycinamidine synthase PurL","interpro_id":"IPR010073","interpro_name":"PurL_large","locations":[{"end":1322,"start":12}],"match_end":1322,"match_start":12,"name":"FGAM_synt"}],"location":{"chromosome_name":"supercont5.2","end_pos":930350,"start_pos":926373,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":469,"start":446}},{"range":{"end":737,"start":722}}],"name":"ade3","ortholog_annotations":[{"gene_uniquename":"SJAG_03355","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8863","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03355","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03355","ortholog_taxonid":4932,"ortholog_uniquename":"YGR061C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03355","ortholog_taxonid":4932,"ortholog_uniquename":"YGR061C","reference_uniquename":"PMID:26896847"}],"product":"phosphoribosylformylglycinamidine synthase Ade3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004642"]}},"subset_termids":["GO:0005794","GO:0016874","GO:0055086","GO:0005773","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0004642":null,"GO:0005524":null,"GO:0005794":null,"GO:0006189":null,"GO:1904262":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03355.1"],"transcripts_by_uniquename":{"SJAG_03355.1":null},"uniprot_identifier":"B6K408","uniquename":"SJAG_03355"}


id: SJAG_03356
data:
  {"alleles_by_uniquename":{"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[101461],"is_not":false,"summary":null,"term":"GO:0033562"},{"annotations":[101462],"is_not":false,"summary":null,"term":"GO:0070317"},{"annotations":[59804],"is_not":false,"summary":null,"term":"GO:0001172"},{"annotations":[101464],"is_not":false,"summary":null,"term":"GO:0030466"},{"annotations":[73692],"is_not":false,"summary":null,"term":"GO:0030422"},{"annotations":[101466],"is_not":false,"summary":null,"term":"GO:0140727"}],"cellular_component":[{"annotations":[101453],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[101455],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101456],"is_not":false,"summary":null,"term":"GO:0031934"},{"annotations":[73691],"is_not":false,"summary":null,"term":"GO:0031380"},{"annotations":[101459],"is_not":false,"summary":null,"term":"GO:0005721"},{"annotations":[101460],"is_not":false,"summary":null,"term":"GO:0140720"}],"molecular_function":[{"annotations":[73690],"is_not":false,"summary":null,"term":"GO:0003968"}],"single_locus_phenotype":[{"annotations":[121454],"is_not":false,"summary":null,"term":"FYPO:0002061"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K409","EnsemblGenomes-Tr:EEB08216","EnsemblGenomes-Gn:SJAG_03356","GOA:B6K409","InterPro:IPR007855"],"deletion_viability":"inviable","feature_publications":[{"reference_uniquename":"PMID:35226668","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cut23","uniquename":"SJAG_03351"},{"name":"fps1","uniquename":"SJAG_03352"},{"name":"par2","uniquename":"SJAG_03353"},{"name":"sfc1","uniquename":"SJAG_03354"},{"name":"ade3","uniquename":"SJAG_03355"},{"name":"rdp1","uniquename":"SJAG_03356"},{"name":"exo8","uniquename":"SJAG_03357"},{"name":"tom20","uniquename":"SJAG_03358"},{"name":"shc1","uniquename":"SJAG_03360"},{"name":"rdi1","uniquename":"SJAG_03361"},{"name":"tnr3","uniquename":"SJAG_03362"}],"genes_by_uniquename":{"SJAG_03356":null,"SPAC6F12.09":null},"genotypes_by_uniquename":{"rdp1delta":{"display_name":"rdp1delta","display_uniquename":"rdp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03356:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA dependent RNA polymerase","id":"PF05183","interpro_description":"RNA-dependent RNA polymerase, eukaryotic-type","interpro_id":"IPR007855","interpro_name":"RNA-dep_RNA_pol_euk-typ","locations":[{"end":1033,"start":456}],"match_end":1033,"match_start":456,"name":"RdRP"},{"dbname":"PANTHER","id":"PTHR23079","interpro_description":"RNA-dependent RNA polymerase, eukaryotic-type","interpro_id":"IPR007855","interpro_name":"RNA-dep_RNA_pol_euk-typ","locations":[{"end":1203,"start":334}],"match_end":1203,"match_start":334,"name":"RNA-DEPENDENT RNA POLYMERASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":934125,"start_pos":930484,"strand":"reverse"},"name":"rdp1","ortholog_annotations":[{"gene_uniquename":"SJAG_03356","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.09","reference_uniquename":"PMID:21511999"}],"product":"RNA-directed RNA polymerase (RDRC) Rdp1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:35226668":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003968"]},"single_locus_phenotype":{"population_phenotype":["FYPO:0002061"]}},"subset_termids":["FYPO:0002059","GO:0005694","GO:0005829","GO:0005634","GO:0140098","GO:0016779","GO:0006325"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0002061":null,"GO:0001172":null,"GO:0003968":null,"GO:0005721":null,"GO:0005829":null,"GO:0030422":null,"GO:0030466":null,"GO:0031380":null,"GO:0031934":null,"GO:0033562":null,"GO:0070317":null,"GO:0140445":null,"GO:0140720":null,"GO:0140727":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03356.1"],"transcripts_by_uniquename":{"SJAG_03356.1":null},"uniprot_identifier":"B6K409","uniquename":"SJAG_03356"}


id: SJAG_03357
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101450],"is_not":false,"summary":null,"term":"GO:0090522"}],"cellular_component":[{"annotations":[101447],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[68781],"is_not":false,"summary":null,"term":"GO:0000145"},{"annotations":[101449],"is_not":false,"summary":null,"term":"GO:1990819"}],"mondo":[{"annotations":[87601],"is_not":false,"summary":null,"term":"MONDO:0033662"}]},"dbxrefs":["InterPro:IPR032403","UniProtKB/TrEMBL:B6K410","InterPro:IPR011993","EnsemblGenomes-Gn:SJAG_03357","InterPro:IPR033961","EnsemblGenomes-Tr:EEB08217","InterPro:IPR042561","GOA:B6K410","InterPro:IPR016159"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fps1","uniquename":"SJAG_03352"},{"name":"par2","uniquename":"SJAG_03353"},{"name":"sfc1","uniquename":"SJAG_03354"},{"name":"ade3","uniquename":"SJAG_03355"},{"name":"rdp1","uniquename":"SJAG_03356"},{"name":"exo8","uniquename":"SJAG_03357"},{"name":"tom20","uniquename":"SJAG_03358"},{"name":"shc1","uniquename":"SJAG_03360"},{"name":"rdi1","uniquename":"SJAG_03361"},{"name":"tnr3","uniquename":"SJAG_03362"},{"name":"pmd1","uniquename":"SJAG_03363"}],"genes_by_uniquename":{"HGNC:24659":null,"SJAG_03357":null,"SPAC6F12.08c":null,"YBR102C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Vps51/EXO84/COG1 N-terminal","id":"PF08700","locations":[{"end":112,"start":30}],"match_end":112,"match_start":30,"name":"VPS51_Exo84_N"},{"dbname":"PFAM","description":"Exocyst component 84 C-terminal","id":"PF16528","interpro_description":"Exocyst component Exo84, C-terminal","interpro_id":"IPR032403","interpro_name":"Exo84_C","locations":[{"end":542,"start":345}],"match_end":542,"match_start":345,"name":"Exo84_C"},{"dbname":"SUPERFAMILY","id":"SSF74788","interpro_description":"Cullin repeat-like-containing domain superfamily","interpro_id":"IPR016159","interpro_name":"Cullin_repeat-like_dom_sf","locations":[{"end":549,"start":336}],"match_end":549,"match_start":336,"name":"Cullin repeat-like"},{"dbname":"GENE3D","id":"G3DSA:1.20.58.1210","interpro_description":"Exocyst component Exo84, C-terminal, subdomain 1","interpro_id":"IPR042561","interpro_name":"Exo84_C_1","locations":[{"end":452,"start":333}],"match_end":452,"match_start":333},{"dbname":"GENE3D","id":"G3DSA:2.30.29.30","interpro_description":"PH-like domain superfamily","interpro_id":"IPR011993","interpro_name":"PH-like_dom_sf","locations":[{"end":288,"start":150}],"match_end":288,"match_start":150},{"dbname":"GENE3D","id":"G3DSA:1.20.58.1220","interpro_description":"Exocyst component Exo84, C-terminal, subdomain 2","interpro_id":"IPR042560","interpro_name":"Exo84_C_2","locations":[{"end":550,"start":456}],"match_end":550,"match_start":456},{"dbname":"PANTHER","id":"PTHR21426","interpro_description":"Exocyst complex component Exo84","interpro_id":"IPR033961","interpro_name":"Exo84","locations":[{"end":548,"start":26}],"match_end":548,"match_start":26,"name":"EXOCYST COMPLEX COMPONENT 8"}],"location":{"chromosome_name":"supercont5.2","end_pos":936439,"start_pos":934729,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":187,"start":175}},{"range":{"end":357,"start":341}}],"name":"exo8","ortholog_annotations":[{"gene_uniquename":"SJAG_03357","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24659","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03357","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03357","ortholog_taxonid":4932,"ortholog_uniquename":"YBR102C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03357","ortholog_taxonid":4932,"ortholog_uniquename":"YBR102C","reference_uniquename":"PMID:26896847"}],"product":"exocyst complex subunit Exo8","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005938","MONDO:0700092","GO:0005829","GO:0016192","GO:0015629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000145":null,"GO:0005829":null,"GO:0090522":null,"GO:1990819":null,"MONDO:0033662":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03357.1"],"transcripts_by_uniquename":{"SJAG_03357.1":null},"uniprot_identifier":"B6K410","uniquename":"SJAG_03357"}


id: SJAG_03358
data:
  {"coiled_coil_coords":[{"range":{"end":53,"start":33}}],"cv_annotations":{"biological_process":[{"annotations":[69774],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[101440],"is_not":false,"summary":null,"term":"GO:0030150"},{"annotations":[69773],"is_not":false,"summary":null,"term":"GO:0006605"},{"annotations":[80959],"is_not":false,"summary":null,"term":"GO:0016031"}],"cellular_component":[{"annotations":[80958],"is_not":false,"summary":null,"term":"GO:0005742"}],"molecular_function":[{"annotations":[101443],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[80960],"is_not":false,"summary":null,"term":"GO:0030943"},{"annotations":[80957],"is_not":false,"summary":null,"term":"GO:0008320"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08218","UniProtKB/TrEMBL:B6K411","GOA:B6K411","EnsemblGenomes-Gn:SJAG_03358","InterPro:IPR002056","InterPro:IPR023392"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"par2","uniquename":"SJAG_03353"},{"name":"sfc1","uniquename":"SJAG_03354"},{"name":"ade3","uniquename":"SJAG_03355"},{"name":"rdp1","uniquename":"SJAG_03356"},{"name":"exo8","uniquename":"SJAG_03357"},{"name":"tom20","uniquename":"SJAG_03358"},{"name":"shc1","uniquename":"SJAG_03360"},{"name":"rdi1","uniquename":"SJAG_03361"},{"name":"tnr3","uniquename":"SJAG_03362"},{"name":"pmd1","uniquename":"SJAG_03363"},{"name":"rpl39","uniquename":"SJAG_03364"}],"genes_by_uniquename":{"HGNC:20947":null,"HGNC:33752":null,"SJAG_03358":null,"SPAC6F12.07":null,"YGR082W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"MAS20 protein import receptor","id":"PF02064","interpro_description":"Protein import receptor MAS20","interpro_id":"IPR002056","interpro_name":"MAS20","locations":[{"end":140,"start":10}],"match_end":140,"match_start":10,"name":"MAS20"},{"dbname":"PRINTS","description":"MAS20 (TOM20) import receptor subunit signature","id":"PR00351","interpro_description":"Protein import receptor MAS20","interpro_id":"IPR002056","interpro_name":"MAS20","locations":[{"end":38,"start":17},{"end":95,"start":73},{"end":133,"start":113}],"match_end":133,"match_start":17,"name":"OM20RECEPTOR"},{"dbname":"FUNFAM","description":"Mitochondrial import receptor subunit TOM20","id":"G3DSA:1.20.960.10:FF:000002","locations":[{"end":143,"start":74}],"match_end":143,"match_start":74},{"dbname":"SUPERFAMILY","id":"SSF47157","interpro_description":"Mitochondrial outer membrane translocase complex, Tom20 domain superfamily","interpro_id":"IPR023392","interpro_name":"Tom20_dom_sf","locations":[{"end":143,"start":72}],"match_end":143,"match_start":72,"name":"Mitochondrial import receptor subunit Tom20"},{"dbname":"GENE3D","id":"G3DSA:1.20.960.10","interpro_description":"Mitochondrial outer membrane translocase complex, Tom20 domain superfamily","interpro_id":"IPR023392","interpro_name":"Tom20_dom_sf","locations":[{"end":142,"start":70}],"match_end":142,"match_start":70,"name":"Mitochondrial outer membrane translocase complex, subunit Tom20 domain"},{"dbname":"PANTHER","id":"PTHR12430","interpro_description":"Protein import receptor MAS20","interpro_id":"IPR002056","interpro_name":"MAS20","locations":[{"end":147,"start":4}],"match_end":147,"match_start":4,"name":"MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20"},{"dbname":"PIRSF","id":"PIRSF037707","interpro_description":"Protein import receptor MAS20","interpro_id":"IPR002056","interpro_name":"MAS20","locations":[{"end":153,"start":1}],"match_end":153,"match_start":1,"name":"TOM20"},{"dbname":"COILS","id":"Coil","locations":[{"end":53,"start":33}],"match_end":53,"match_start":33,"name":"Coil"},{"dbname":"NCBIFAM","description":"mitochondrial import receptor subunit","id":"TIGR00985","interpro_description":"Protein import receptor MAS20","interpro_id":"IPR002056","interpro_name":"MAS20","locations":[{"end":144,"start":4}],"match_end":144,"match_start":4,"name":"3a0801s04tom"}],"location":{"chromosome_name":"supercont5.2","end_pos":937267,"start_pos":936702,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":69,"start":55}}],"name":"tom20","ortholog_annotations":[{"gene_uniquename":"SJAG_03358","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20947","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03358","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:33752","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03358","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03358","ortholog_taxonid":4932,"ortholog_uniquename":"YGR082W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03358","ortholog_taxonid":4932,"ortholog_uniquename":"YGR082W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial TOM complex subunit Tom20","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030943"],"not-binding":["GO:0016887","GO:0008320"]}},"subset_termids":["GO:0140318","GO:0022857","GO:0016887","GO:0006605","GO:0055085","GO:0005739","GO:0005048"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005742":null,"GO:0006605":null,"GO:0006886":null,"GO:0008320":null,"GO:0016031":null,"GO:0016887":null,"GO:0030150":null,"GO:0030943":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":22,"start":5}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03358.1"],"transcripts_by_uniquename":{"SJAG_03358.1":null},"uniprot_identifier":"B6K411","uniquename":"SJAG_03358"}


id: SJAG_03360
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":396,"start":396}}],"alleles_by_uniquename":{"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_03360:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03360","name":"shc1delta","uniquename":"SJAG_03360:allele-1"}},"chains":[{"assigned_by":"UniProtKB","range":{"end":656,"start":1}}],"coiled_coil_coords":[{"range":{"end":35,"start":15}}],"cv_annotations":{"biological_process":[{"annotations":[121294],"is_not":false,"summary":null,"term":"GO:0006629"},{"annotations":[67804],"is_not":false,"summary":null,"term":"GO:0016104"}],"cellular_component":[{"annotations":[121295],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[67803],"is_not":false,"summary":null,"term":"GO:0005811"},{"annotations":[121297],"is_not":false,"summary":null,"term":"GO:0005886"},{"annotations":[121296],"is_not":false,"summary":null,"term":"GO:0005774"}],"molecular_function":[{"annotations":[67802],"is_not":false,"summary":null,"term":"GO:0016866"}],"multi_locus_phenotype":[{"annotations":[121306],"is_not":false,"summary":null,"term":"FYPO:0000049"}],"single_locus_phenotype":[{"annotations":[121300],"is_not":false,"summary":null,"term":"FYPO:0006545"},{"annotations":[121298],"is_not":false,"summary":null,"term":"FYPO:0005883"},{"annotations":[121299],"is_not":false,"summary":null,"term":"FYPO:0001419"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K412","InterPro:IPR032697","GOA:B6K412","InterPro:IPR006400","EnsemblGenomes-Gn:SJAG_03360","InterPro:IPR008930","InterPro:IPR018333","InterPro:IPR032696","EnsemblGenomes-Tr:EEB08219"],"deletion_viability":"viable","feature_publications":[{"reference_uniquename":"PMID:40195311","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sfc1","uniquename":"SJAG_03354"},{"name":"ade3","uniquename":"SJAG_03355"},{"name":"rdp1","uniquename":"SJAG_03356"},{"name":"exo8","uniquename":"SJAG_03357"},{"name":"tom20","uniquename":"SJAG_03358"},{"name":"shc1","uniquename":"SJAG_03360"},{"name":"rdi1","uniquename":"SJAG_03361"},{"name":"tnr3","uniquename":"SJAG_03362"},{"name":"pmd1","uniquename":"SJAG_03363"},{"name":"rpl39","uniquename":"SJAG_03364"},{"uniquename":"SJAG_03365"}],"genes_by_uniquename":{"SJAG_00370":null,"SJAG_03360":null},"genotypes_by_uniquename":{"erg1delta__shc1delta":{"display_name":"erg1delta shc1delta","display_uniquename":"erg1delta__shc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00370:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03360:allele-1","expression":"Null"}]}]},"shc1delta":{"display_name":"shc1delta","display_uniquename":"shc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03360:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Squalene-hopene cyclase N-terminal domain","id":"PF13249","interpro_description":"Squalene cyclase, N-terminal","interpro_id":"IPR032697","interpro_name":"SQ_cyclase_N","locations":[{"end":311,"start":22}],"match_end":311,"match_start":22,"name":"SQHop_cyclase_N"},{"dbname":"PFAM","description":"Squalene-hopene cyclase C-terminal domain","id":"PF13243","interpro_description":"Squalene cyclase, C-terminal","interpro_id":"IPR032696","interpro_name":"SQ_cyclase_C","locations":[{"end":642,"start":320}],"match_end":642,"match_start":320,"name":"SQHop_cyclase_C"},{"dbname":"CDD","description":"SQCY_1","id":"cd02892","interpro_description":"Squalene cyclase","interpro_id":"IPR018333","interpro_name":"Squalene_cyclase","locations":[{"end":641,"start":22}],"match_end":641,"match_start":22,"name":"SQCY_1"},{"dbname":"SUPERFAMILY","id":"SSF48239","interpro_description":"Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid","interpro_id":"IPR008930","interpro_name":"Terpenoid_cyclase/PrenylTrfase","locations":[{"end":643,"start":46}],"match_end":643,"match_start":46,"name":"Terpenoid cyclases/Protein prenyltransferases"},{"dbname":"GENE3D","id":"G3DSA:1.50.10.20","locations":[{"end":641,"start":26}],"match_end":641,"match_start":26},{"dbname":"PANTHER","id":"PTHR11764","interpro_description":"Squalene cyclase","interpro_id":"IPR018333","interpro_name":"Squalene_cyclase","locations":[{"end":643,"start":10}],"match_end":643,"match_start":10,"name":"TERPENE CYCLASE/MUTASE FAMILY MEMBER"},{"dbname":"COILS","id":"Coil","locations":[{"end":35,"start":15}],"match_end":35,"match_start":15,"name":"Coil"},{"dbname":"NCBIFAM","description":"squalene--hopene cyclase","id":"TIGR01507","interpro_description":"Squalene hopene cyclase","interpro_id":"IPR006400","interpro_name":"Hopene-cyclase","locations":[{"end":646,"start":15}],"match_end":646,"match_start":15,"name":"hopene_cyclase"},{"dbname":"NCBIFAM","description":"squalene/oxidosqualene cyclases","id":"TIGR01787","interpro_description":"Squalene cyclase","interpro_id":"IPR018333","interpro_name":"Squalene_cyclase","locations":[{"end":642,"start":21}],"match_end":642,"match_start":21,"name":"squalene_cyclas"},{"dbname":"SFLD","description":"Prenyltransferase Like 2","id":"SFLDG01016","interpro_description":"Squalene cyclase","interpro_id":"IPR018333","interpro_name":"Squalene_cyclase","locations":[{"end":644,"start":15}],"match_end":644,"match_start":15,"name":"Prenyltransferase_Like_2"}],"location":{"chromosome_name":"supercont5.2","end_pos":941594,"start_pos":939624,"strand":"forward"},"name":"shc1","product":"squalene cyclase-like protein","references_by_uniquename":{"GO_REF:0000002":null,"PMID:40195311":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016866"]},"multi_locus_phenotype":{"cell_phenotype":["FYPO:0000049"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0006545"],"population_phenotype":["FYPO:0001419","FYPO:0005883"]}},"subset_termids":["GO:0005886","GO:0005783","FYPO:0002058","FYPO:0000139","GO:0005773","GO:0006629","FYPO:0000138","GO:0016853","FYPO:0001320"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000049":null,"FYPO:0001419":null,"FYPO:0005883":null,"FYPO:0006545":null,"GO:0005774":null,"GO:0005783":null,"GO:0005811":null,"GO:0005886":null,"GO:0006629":null,"GO:0016104":null,"GO:0016866":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03360.1"],"transcripts_by_uniquename":{"SJAG_03360.1":null},"uniprot_identifier":"B6K412","uniquename":"SJAG_03360"}


id: SJAG_03361
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101434],"is_not":false,"summary":null,"term":"GO:0030036"},{"annotations":[77107],"is_not":false,"summary":null,"term":"GO:0007266"}],"cellular_component":[{"annotations":[77105],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[77106],"is_not":false,"summary":null,"term":"GO:0016020"},{"annotations":[101433],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[77104],"is_not":false,"summary":null,"term":"GO:0005094"}],"mondo":[{"annotations":[86850],"is_not":false,"summary":null,"term":"MONDO:0014099"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03361","InterPro:IPR000406","InterPro:IPR014756","EnsemblGenomes-Tr:EEB08220","InterPro:IPR024792","UniProtKB/TrEMBL:B6K413","GOA:B6K413"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":20,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ade3","uniquename":"SJAG_03355"},{"name":"rdp1","uniquename":"SJAG_03356"},{"name":"exo8","uniquename":"SJAG_03357"},{"name":"tom20","uniquename":"SJAG_03358"},{"name":"shc1","uniquename":"SJAG_03360"},{"name":"rdi1","uniquename":"SJAG_03361"},{"name":"tnr3","uniquename":"SJAG_03362"},{"name":"pmd1","uniquename":"SJAG_03363"},{"name":"rpl39","uniquename":"SJAG_03364"},{"uniquename":"SJAG_03365"},{"name":"asf1","uniquename":"SJAG_03366"}],"genes_by_uniquename":{"HGNC:678":null,"HGNC:679":null,"SJAG_03361":null,"SPAC6F12.06":null,"YDL135C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RHO protein GDP dissociation inhibitor","id":"PF02115","interpro_description":"Rho protein GDP-dissociation inhibitor","interpro_id":"IPR000406","interpro_name":"Rho_GDI","locations":[{"end":190,"start":7}],"match_end":190,"match_start":7,"name":"Rho_GDI"},{"dbname":"PRINTS","description":"RHO protein GDP dissociation inhibitor signature","id":"PR00492","interpro_description":"Rho protein GDP-dissociation inhibitor","interpro_id":"IPR000406","interpro_name":"Rho_GDI","locations":[{"end":157,"start":112},{"end":188,"start":171}],"match_end":188,"match_start":112,"name":"RHOGDI"},{"dbname":"FUNFAM","description":"Rho GDP-dissociation inhibitor 1","id":"G3DSA:2.70.50.30:FF:000004","locations":[{"end":191,"start":6}],"match_end":191,"match_start":6},{"dbname":"SUPERFAMILY","id":"SSF81296","interpro_description":"Immunoglobulin E-set","interpro_id":"IPR014756","interpro_name":"Ig_E-set","locations":[{"end":191,"start":9}],"match_end":191,"match_start":9,"name":"E set domains"},{"dbname":"GENE3D","id":"G3DSA:2.70.50.30","interpro_description":"Rho GDP-dissociation inhibitor domain superfamily","interpro_id":"IPR024792","interpro_name":"RhoGDI_dom_sf","locations":[{"end":191,"start":12}],"match_end":191,"match_start":12,"name":"Coagulation Factor XIII, subunit A, domain 1"},{"dbname":"PANTHER","id":"PTHR10980","interpro_description":"Rho protein GDP-dissociation inhibitor","interpro_id":"IPR000406","interpro_name":"Rho_GDI","locations":[{"end":190,"start":8}],"match_end":190,"match_start":8,"name":"RHO GDP-DISSOCIATION INHIBITOR"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":20,"start":1}],"match_end":20,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":943622,"start_pos":943047,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":67,"start":56}},{"range":{"end":155,"start":143}}],"name":"rdi1","ortholog_annotations":[{"gene_uniquename":"SJAG_03361","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:678","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03361","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:679","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03361","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03361","ortholog_taxonid":4932,"ortholog_uniquename":"YDL135C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03361","ortholog_taxonid":4932,"ortholog_uniquename":"YDL135C","reference_uniquename":"PMID:26896847"}],"product":"Rho GDP dissociation inhibitor Rdi1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0005094"]}},"subset_termids":["GO:0005829","GO:0005634","MONDO:0005240","GO:0030036","GO:0030234","GO:0023052","GO:0098772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005094":null,"GO:0005634":null,"GO:0005829":null,"GO:0007266":null,"GO:0016020":null,"GO:0030036":null,"MONDO:0014099":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03361.1"],"transcripts_by_uniquename":{"SJAG_03361.1":null},"uniprot_identifier":"B6K413","uniquename":"SJAG_03361"}


id: SJAG_03362
data:
  {"cv_annotations":{"biological_process":[{"annotations":[80007],"is_not":false,"summary":null,"term":"GO:0009229"},{"annotations":[101426],"is_not":false,"summary":null,"term":"GO:0036172"}],"cellular_component":[{"annotations":[101422],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[68509],"is_not":false,"summary":null,"term":"GO:0044715"},{"annotations":[68501],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[68505],"is_not":false,"summary":null,"term":"GO:0030975"},{"annotations":[80008],"is_not":false,"summary":null,"term":"GO:0004788"}],"mondo":[{"annotations":[88477],"is_not":false,"summary":null,"term":"MONDO:0013761"}]},"dbxrefs":["InterPro:IPR007371","GOA:B6K414","UniProtKB/TrEMBL:B6K414","InterPro:IPR036371","InterPro:IPR036759","InterPro:IPR031804","InterPro:IPR006282","InterPro:IPR000086","InterPro:IPR015797","EnsemblGenomes-Gn:SJAG_03362","InterPro:IPR007373","EnsemblGenomes-Tr:EEB08221"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":392,"start":372}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rdp1","uniquename":"SJAG_03356"},{"name":"exo8","uniquename":"SJAG_03357"},{"name":"tom20","uniquename":"SJAG_03358"},{"name":"shc1","uniquename":"SJAG_03360"},{"name":"rdi1","uniquename":"SJAG_03361"},{"name":"tnr3","uniquename":"SJAG_03362"},{"name":"pmd1","uniquename":"SJAG_03363"},{"name":"rpl39","uniquename":"SJAG_03364"},{"uniquename":"SJAG_03365"},{"name":"asf1","uniquename":"SJAG_03366"},{"name":"trm44","uniquename":"SJAG_03367"}],"genes_by_uniquename":{"HGNC:17358":null,"HGNC:32036":null,"SJAG_03362":null,"SPAC6F12.05c":null,"YJR142W":null,"YOR143C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Thiamin pyrophosphokinase, vitamin B1 binding domain","id":"PF04265","interpro_description":"Thiamin pyrophosphokinase, thiamin-binding domain","interpro_id":"IPR007373","interpro_name":"Thiamin_PyroPKinase_B1-bd","locations":[{"end":633,"start":574}],"match_end":633,"match_start":574,"name":"TPK_B1_binding"},{"dbname":"PFAM","description":"NUDIX domain","id":"PF00293","interpro_description":"NUDIX hydrolase domain","interpro_id":"IPR000086","interpro_name":"NUDIX_hydrolase_dom","locations":[{"end":328,"start":215}],"match_end":328,"match_start":215,"name":"NUDIX"},{"dbname":"PFAM","description":"Thiamin pyrophosphokinase, catalytic domain","id":"PF04263","interpro_description":"Thiamin pyrophosphokinase, catalytic domain","interpro_id":"IPR007371","interpro_name":"TPK_catalytic","locations":[{"end":545,"start":442}],"match_end":545,"match_start":442,"name":"TPK_catalytic"},{"dbname":"PFAM","description":"Domain of unknown function (DUF4743)","id":"PF15916","interpro_description":"Domain of unknown function DUF4743","interpro_id":"IPR031804","interpro_name":"DUF4743","locations":[{"end":119,"start":8}],"match_end":119,"match_start":8,"name":"DUF4743"},{"dbname":"CDD","description":"TPK","id":"cd07995","interpro_description":"Thiamin pyrophosphokinase","interpro_id":"IPR006282","interpro_name":"Thi_PPkinase","locations":[{"end":637,"start":425}],"match_end":637,"match_start":425,"name":"TPK"},{"dbname":"CDD","description":"NUDIX_Tnr3_like","id":"cd03676","locations":[{"end":343,"start":211}],"match_end":343,"match_start":211,"name":"NUDIX_Tnr3_like"},{"dbname":"PROSITE_PROFILES","description":"Nudix hydrolase domain profile.","id":"PS51462","interpro_description":"NUDIX hydrolase domain","interpro_id":"IPR000086","interpro_name":"NUDIX_hydrolase_dom","locations":[{"end":336,"start":188}],"match_end":336,"match_start":188,"name":"NUDIX"},{"dbname":"SMART","id":"SM00983","interpro_description":"Thiamin pyrophosphokinase, thiamin-binding domain","interpro_id":"IPR007373","interpro_name":"Thiamin_PyroPKinase_B1-bd","locations":[{"end":634,"start":567}],"match_end":634,"match_start":567,"name":"TPK_B1_binding_a_2_a"},{"dbname":"FUNFAM","description":"Thiamin pyrophosphokinase, putative","id":"G3DSA:3.90.79.10:FF:000019","locations":[{"end":362,"start":192}],"match_end":362,"match_start":192},{"dbname":"SUPERFAMILY","id":"SSF63999","interpro_description":"Thiamin pyrophosphokinase, catalytic domain superfamily","interpro_id":"IPR036759","interpro_name":"TPK_catalytic_sf","locations":[{"end":547,"start":414}],"match_end":547,"match_start":414,"name":"Thiamin pyrophosphokinase, catalytic domain"},{"dbname":"SUPERFAMILY","id":"SSF55811","interpro_description":"NUDIX hydrolase-like domain superfamily","interpro_id":"IPR015797","interpro_name":"NUDIX_hydrolase-like_dom_sf","locations":[{"end":343,"start":215}],"match_end":343,"match_start":215,"name":"Nudix"},{"dbname":"SUPERFAMILY","id":"SSF63862","interpro_description":"Thiamin pyrophosphokinase, thiamin-binding domain superfamily","interpro_id":"IPR036371","interpro_name":"TPK_B1-bd_sf","locations":[{"end":639,"start":558}],"match_end":639,"match_start":558,"name":"Thiamin pyrophosphokinase, substrate-binding domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.10240","interpro_description":"Thiamin pyrophosphokinase, catalytic domain superfamily","interpro_id":"IPR036759","interpro_name":"TPK_catalytic_sf","locations":[{"end":639,"start":423}],"match_end":639,"match_start":423,"name":"Thiamin pyrophosphokinase, catalytic domain"},{"dbname":"GENE3D","id":"G3DSA:3.90.79.10","locations":[{"end":139,"start":108},{"end":362,"start":215}],"match_end":362,"match_start":108,"name":"Nucleoside Triphosphate Pyrophosphohydrolase"},{"dbname":"PANTHER","id":"PTHR13622","locations":[{"end":362,"start":59}],"match_end":362,"match_start":59,"name":"THIAMIN PYROPHOSPHOKINASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":392,"start":372}],"match_end":392,"match_start":372,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"thiamine diphosphokinase","id":"TIGR01378","interpro_description":"Thiamin pyrophosphokinase","interpro_id":"IPR006282","interpro_name":"Thi_PPkinase","locations":[{"end":636,"start":426}],"match_end":636,"match_start":426,"name":"thi_PPkinase"}],"location":{"chromosome_name":"supercont5.2","end_pos":945854,"start_pos":943881,"strand":"forward"},"name":"tnr3","ortholog_annotations":[{"gene_uniquename":"SJAG_03362","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17358","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03362","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:32036","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03362","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6F12.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03362","ortholog_taxonid":4932,"ortholog_uniquename":"YJR142W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03362","ortholog_taxonid":4932,"ortholog_uniquename":"YOR143C","reference_uniquename":"PMID:29761456"}],"product":"thiamine diphosphokinase Tnr3/ Nudix hydrolase fusion protein","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0030975"],"not-binding":["GO:0044715","GO:0004788"]}},"subset_termids":["GO:0006766","GO:0006790","GO:0005829","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004788":null,"GO:0005524":null,"GO:0005829":null,"GO:0009229":null,"GO:0030975":null,"GO:0036172":null,"GO:0044715":null,"MONDO:0013761":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03362.1"],"transcripts_by_uniquename":{"SJAG_03362.1":null},"uniprot_identifier":"B6K414","uniquename":"SJAG_03362"}


id: SJAG_03363
data:
  {"cv_annotations":{"biological_process":[{"annotations":[119967],"is_not":false,"summary":null,"term":"GO:1990961"}],"cellular_component":[{"annotations":[119965],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[119966],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[119968],"is_not":false,"summary":null,"term":"GO:0008559"},{"annotations":[62712],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[62711],"is_not":false,"summary":null,"term":"GO:0016887"}],"mondo":[{"annotations":[88622],"is_not":false,"summary":null,"term":"MONDO:0011559"},{"annotations":[88869],"is_not":false,"summary":null,"term":"MONDO:0013995"},{"annotations":[89195],"is_not":false,"summary":null,"term":"MONDO:0012831"},{"annotations":[87182],"is_not":false,"summary":null,"term":"MONDO:0010939"},{"annotations":[88745],"is_not":false,"summary":null,"term":"MONDO:0011156"},{"annotations":[87378],"is_not":false,"summary":null,"term":"MONDO:0011214"}]},"dbxrefs":["InterPro:IPR003439","EnsemblGenomes-Gn:SJAG_03363","InterPro:IPR027417","UniProtKB/TrEMBL:B6K415","InterPro:IPR011527","EnsemblGenomes-Tr:EEB08222","InterPro:IPR036640","InterPro:IPR017871","InterPro:IPR003593","GOA:B6K415"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":29,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"exo8","uniquename":"SJAG_03357"},{"name":"tom20","uniquename":"SJAG_03358"},{"name":"shc1","uniquename":"SJAG_03360"},{"name":"rdi1","uniquename":"SJAG_03361"},{"name":"tnr3","uniquename":"SJAG_03362"},{"name":"pmd1","uniquename":"SJAG_03363"},{"name":"rpl39","uniquename":"SJAG_03364"},{"uniquename":"SJAG_03365"},{"name":"asf1","uniquename":"SJAG_03366"},{"name":"trm44","uniquename":"SJAG_03367"},{"name":"tvp15","uniquename":"SJAG_03368"}],"genes_by_uniquename":{"HGNC:40":null,"HGNC:42":null,"HGNC:45":null,"SJAG_03363":null,"SPCC663.03":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ABC transporter","id":"PF00005","interpro_description":"ABC transporter-like, ATP-binding domain","interpro_id":"IPR003439","interpro_name":"ABC_transporter-like_ATP-bd","locations":[{"end":583,"start":425},{"end":1225,"start":1075}],"match_end":1225,"match_start":425,"name":"ABC_tran"},{"dbname":"PFAM","description":"ABC transporter transmembrane region","id":"PF00664","interpro_description":"ABC transporter type 1, transmembrane domain","interpro_id":"IPR011527","interpro_name":"ABC1_TM_dom","locations":[{"end":357,"start":84},{"end":1006,"start":735}],"match_end":1006,"match_start":84,"name":"ABC_membrane"},{"dbname":"CDD","description":"ABC_6TM_Pgp_ABCB1_D2_like","id":"cd18578","locations":[{"end":1040,"start":731}],"match_end":1040,"match_start":731,"name":"ABC_6TM_Pgp_ABCB1_D2_like"},{"dbname":"CDD","description":"ABC_6TM_Pgp_ABCB1_D1_like","id":"cd18577","locations":[{"end":380,"start":82}],"match_end":380,"match_start":82,"name":"ABC_6TM_Pgp_ABCB1_D1_like"},{"dbname":"CDD","description":"ABC_MTABC3_MDL1_MDL2","id":"cd03249","locations":[{"end":653,"start":407},{"end":1295,"start":1057}],"match_end":1295,"match_start":407,"name":"ABC_MTABC3_MDL1_MDL2"},{"dbname":"PROSITE_PATTERNS","description":"ABC transporters family signature.","id":"PS00211","interpro_description":"ABC transporter-like, conserved site","interpro_id":"IPR017871","interpro_name":"ABC_transporter-like_CS","locations":[{"end":569,"start":555},{"end":1211,"start":1197}],"match_end":1211,"match_start":555,"name":"ABC_TRANSPORTER_1"},{"dbname":"PROSITE_PROFILES","description":"ATP-binding cassette, ABC transporter-type domain profile.","id":"PS50893","interpro_description":"ABC transporter-like, ATP-binding domain","interpro_id":"IPR003439","interpro_name":"ABC_transporter-like_ATP-bd","locations":[{"end":652,"start":407},{"end":1294,"start":1057}],"match_end":1294,"match_start":407,"name":"ABC_TRANSPORTER_2"},{"dbname":"PROSITE_PROFILES","description":"ABC transporter integral membrane type-1 fused domain profile.","id":"PS50929","interpro_description":"ABC transporter type 1, transmembrane domain","interpro_id":"IPR011527","interpro_name":"ABC1_TM_dom","locations":[{"end":372,"start":83},{"end":1022,"start":736}],"match_end":1022,"match_start":83,"name":"ABC_TM1F"},{"dbname":"SMART","id":"SM00382","interpro_description":"AAA+ ATPase domain","interpro_id":"IPR003593","interpro_name":"AAA+_ATPase","locations":[{"end":629,"start":434},{"end":1287,"start":1084}],"match_end":1287,"match_start":434,"name":"AAA_5"},{"dbname":"FUNFAM","description":"p-GlycoProtein related","id":"G3DSA:3.40.50.300:FF:001370","locations":[{"end":1296,"start":1049}],"match_end":1296,"match_start":1049},{"dbname":"FUNFAM","description":"ABC multidrug transporter Mdr1","id":"G3DSA:1.20.1560.10:FF:000102","locations":[{"end":404,"start":69}],"match_end":404,"match_start":69},{"dbname":"FUNFAM","description":"ABC transporter B family member 19","id":"G3DSA:3.40.50.300:FF:000251","locations":[{"end":654,"start":397}],"match_end":654,"match_start":397},{"dbname":"SUPERFAMILY","id":"SSF90123","interpro_description":"ABC transporter type 1, transmembrane domain superfamily","interpro_id":"IPR036640","interpro_name":"ABC1_TM_sf","locations":[{"end":386,"start":62},{"end":1020,"start":731},{"end":1209,"start":1201}],"match_end":1209,"match_start":62,"name":"ABC transporter transmembrane region"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":653,"start":399},{"end":1295,"start":1047}],"match_end":1295,"match_start":399,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":654,"start":397},{"end":1295,"start":1047}],"match_end":1295,"match_start":397},{"dbname":"GENE3D","id":"G3DSA:1.20.1560.10","interpro_description":"ABC transporter type 1, transmembrane domain superfamily","interpro_id":"IPR036640","interpro_name":"ABC1_TM_sf","locations":[{"end":396,"start":70},{"end":694,"start":663},{"end":1046,"start":730}],"match_end":1046,"match_start":70,"name":"ABC transporter type 1, transmembrane domain"},{"dbname":"PANTHER","id":"PTHR43394","interpro_description":"Type 1 protein exporter","interpro_id":"IPR039421","interpro_name":"Type_1_exporter","locations":[{"end":656,"start":20}],"match_end":656,"match_start":20,"name":"ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":29,"start":1}],"match_end":29,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":13,"start":1}],"match_end":13,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":951180,"start_pos":947278,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":318,"start":309}},{"range":{"end":678,"start":665}}],"name":"pmd1","ortholog_annotations":[{"gene_uniquename":"SJAG_03363","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:40","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03363","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:42","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03363","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:45","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03363","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC663.03","reference_uniquename":"PMID:21511999"}],"product":"plasma membrane leptomycin transmembrane transporter Pmd1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0016887","GO:0008559"]}},"subset_termids":["MONDO:0005066","GO:0055085","GO:0098754","GO:0016887","MONDO:0004335","MONDO:0005046","GO:0005773","GO:0022857","MONDO:0002515","GO:0005886"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000324":null,"GO:0005524":null,"GO:0005886":null,"GO:0008559":null,"GO:0016887":null,"GO:1990961":null,"MONDO:0010939":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0012831":null,"MONDO:0013995":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":102,"start":80}},{"assigned_by":"TMHMM","range":{"end":153,"start":131}},{"assigned_by":"TMHMM","range":{"end":224,"start":205}},{"assigned_by":"TMHMM","range":{"end":251,"start":229}},{"assigned_by":"TMHMM","range":{"end":330,"start":308}},{"assigned_by":"TMHMM","range":{"end":363,"start":341}},{"assigned_by":"TMHMM","range":{"end":756,"start":734}},{"assigned_by":"TMHMM","range":{"end":798,"start":776}},{"assigned_by":"TMHMM","range":{"end":892,"start":870}},{"assigned_by":"TMHMM","range":{"end":983,"start":961}},{"assigned_by":"TMHMM","range":{"end":1018,"start":996}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03363.1"],"transcripts_by_uniquename":{"SJAG_03363.1":null},"uniprot_identifier":"B6K415","uniquename":"SJAG_03363"}


