# terms

id: MONDO:1010819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, cattle","secondary_identifiers":["OMIA:000810-9913"],"termid":"MONDO:1010819","xrefs":{"Monarch":{"xref_id":"1010819"}}}


id: PBO:0068323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 24","termid":"PBO:0068323"}


id: PBO:0064850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 1","termid":"PBO:0064850"}


id: PBO:0041539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 80","termid":"PBO:0041539"}


id: GO:0102588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + malonyl-CoA = cyanidin 3-O-(6-O-malonyl-beta-D-glucoside) + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 6''-O-malonyltransferase activity (obsolete GO:0102588)","termid":"GO:0102588"}


id: GO:0042609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CD4, a receptor found on the surface of T cells, monocytes and macrophages.","definition_xrefs":["MSH:D015704","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CD4 receptor binding","termid":"GO:0042609"}


id: PBO:0068039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 344","termid":"PBO:0068039"}


id: GO:0019731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against bacteria mediated through a body fluid. Examples of this process are the antibacterial humoral responses in Mus musculus and Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial humoral response","termid":"GO:0019730"},{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibacterial humoral response","secondary_identifiers":["GO:0006961","GO:0019733"],"termid":"GO:0019731"}


id: PBO:0091928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalt/nickel-dependent phosphatase Duf89","termid":"PBO:0091928"}


id: PBO:0045005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damage induced long noncoding RNA","termid":"PBO:0045005"}


id: PBO:0077553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 259","termid":"PBO:0077553"}


id: PBO:0089928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER DNAJ domain protein Erj5","termid":"PBO:0089928"}


id: GO:0052894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: norspermine + oxygen + H2O = norspermidine + 3-aminopropanal + hydrogen peroxide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete norspermine:oxygen oxidoreductase activity (obsolete GO:0052894)","termid":"GO:0052894"}


id: PBO:0041652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 2","termid":"PBO:0041652"}


id: PBO:0113445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit beta1 of the nascent polypeptide-associated complex (NAC); involved in protein targeting to mitochondria; peripheral component of cytoplasmic ribosomes; regulates Atg32p phosphorylation to promote respiration-induced mitophagy; enhances DNA binding of the Gal4p; homolog of human BTF3b; EGD1 has a paralog, BTT1, that arose from the whole genome duplication","termid":"PBO:0113445"}


id: PBO:0075796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sex determining region Y","termid":"PBO:0075796"}


id: MONDO:0012959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 11, susceptibility to","secondary_identifiers":["DOID:0111285","OMIM:612599","MEDGEN:382613","UMLS:C2675475"],"synonyms":[{"name":"PSORS11","type":"exact"},{"name":"psoriasis 11, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 11","type":"exact"}],"termid":"MONDO:0012959","xrefs":{"Monarch":{"xref_id":"0012959"}}}


id: PBO:0087475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both RNase MRP and nuclear RNase P; RNase MRP cleaves pre-rRNA, while nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087475"}


id: GO:0044148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont involved in interaction with host (obsolete GO:0044148)","synonyms":[{"name":"positive regulation of growth of symbiont during interaction with host","type":"related"}],"termid":"GO:0044148"}


id: MONDO:0044343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any degenerative disorder affecting one or more vertebral disks of the cervical spine.","definition_xrefs":["NCIT:C27156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intervertebral disk degenerative disorder","termid":"MONDO:0011385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical disk degenerative disorder","secondary_identifiers":["EFO:0009537","SCTID:69195002","UMLS:C0410606","MEDGEN:96081"],"synonyms":[{"name":"cervical Disc Degeneration","type":"exact"},{"name":"cervical Disc degenerative disease","type":"exact"},{"name":"cervical Disc degenerative disorder","type":"exact"},{"name":"cervical region of vertebral column intervertebral disc degenerative disorder","type":"exact"},{"name":"cervical region of vertebral column intervertebral disk degenerative disorder","type":"exact"},{"name":"degeneration of cervical intervertebral disc","type":"exact"},{"name":"degeneration of cervical intervertebral disk","type":"exact"},{"name":"intervertebral disc degenerative disorder of cervical region of vertebral column","type":"exact"},{"name":"intervertebral disk degenerative disorder of cervical region of vertebral column","type":"exact"}],"termid":"MONDO:0044343","xrefs":{"Monarch":{"xref_id":"0044343"}}}


id: GO:1900051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone exchange.","definition_xrefs":["PMID:20332092","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone exchange (obsolete GO:1900051)","synonyms":[{"name":"activation of histone chaperone","type":"related"},{"name":"activation of histone exchange","type":"related"},{"name":"activation of histone replacement","type":"exact"},{"name":"positive regulation of histone chaperone","type":"related"},{"name":"positive regulation of histone replacement","type":"exact"},{"name":"up regulation of histone chaperone","type":"related"},{"name":"up regulation of histone exchange","type":"related"},{"name":"up regulation of histone replacement","type":"exact"},{"name":"up-regulation of histone chaperone","type":"related"},{"name":"up-regulation of histone exchange","type":"related"},{"name":"up-regulation of histone replacement","type":"exact"},{"name":"upregulation of histone chaperone","type":"related"},{"name":"upregulation of histone exchange","type":"related"},{"name":"upregulation of histone replacement","type":"exact"}],"termid":"GO:1900051"}


id: PBO:0077252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 3","termid":"PBO:0077252"}


id: PBO:0074483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 2","termid":"PBO:0074483"}


id: PBO:0088308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein, lipocalin superfamily Svf2","termid":"PBO:0088308"}


id: GO:0110062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the angiotensin-activated signaling pathway.","definition_xrefs":["GOC:lf","PMID:28784619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of angiotensin-activated signaling pathway","termid":"GO:0110061"},{"relation_name":"negatively_regulates","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of angiotensin-activated signaling pathway","termid":"GO:0110062"}


id: GO:0016921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of the N-terminal pyroglutamyl group from pGlu-His-Xaa tripeptides and pGlu-His-Xaa-Gly tetrapeptides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyroglutamyl-peptidase II activity (obsolete GO:0016921)","synonyms":[{"name":"pyroglutamyl-peptidase II activity","type":"exact"}],"termid":"GO:0016921"}


id: PBO:0055567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3003","termid":"PBO:0055567"}


id: GO:2001119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a methanofuran.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanofuran metabolic process","synonyms":[{"name":"methanofuran metabolism","type":"exact"}],"termid":"GO:2001119"}


id: PBO:0030904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_organization_during_vegetative_growth","termid":"PBO:0030904"}


id: GO:0043137
data:
  {"annotated_genes":["SJAG_01884","SJAG_06022","SJAG_00400","SJAG_03780","SJAG_01648","SJAG_04183","SJAG_02039"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63381,77762,82056],"is_not":false,"summary":null,"term":"GO:0043137"},{"annotations":[106079,104870,90136,114508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903469"}]},"cv_name":"biological_process","definition":"Removal of the Okazaki RNA primer from the lagging strand of replicating DNA, by a combination of the actions of DNA polymerase, DNA helicase and an endonuclease.","definition_xrefs":["GOC:jl","PMID:12424238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"part_of","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01648":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_03780":null,"SJAG_04183":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA replication, removal of RNA primer","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"Okazaki initiator RNA removal","type":"exact"}],"termid":"GO:0043137","terms_by_termid":{"GO:0043137":null,"GO:1903469":null}}


id: PBO:0086174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the maintenance of bud site selection; localizes; localization to the bud neck and previous sites of cell division (bud scars; cytokinesis remnants (CRMs)) is interdependent with Rax2p; required with Rax1p to anchor both Nba1p and Nis1p to CRMs where a Cdc42p inhibitory zone is established preventing repolarization of cells at previous division sites; RAX2 mRNA stability is regulated by Mpt5p; predicted type I membrane-spanning protein; N-glycosylated","termid":"PBO:0086174"}


id: PBO:0067184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 242, pseudogene","termid":"PBO:0067184"}


id: PR:000050251
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rho2 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PomBase:MAH","PMID:26960792","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein rho2 (Schizosaccharomyces pombe)","termid":"PR:000050250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho2</GTP+","pombase_gene_id":"SPAC16.01","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein rho2, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rho2/GTP+","type":"exact"},{"name":"rho2</GTP+","type":"exact"}],"termid":"PR:000050251"}


id: MONDO:0022757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 20 trisomy, (also called trisomy 20) is a condition in which a fetus or individual has an extra full or partial copy of chromosome 20 in some or allof of his/her cells. An extra full copy of chromosome 20 in all of a person's cells is rare, and almost all fetuses with this do not survive past the first trimester ofpregnancy. The presence of an extra copyof only part of chromosome 20 is called partial trisomy 20; and an extra copy of chromosome 20 in only some of a person's cells is called mosaic trisomy 20. Mosaic trisomy 20 is the most common type of chromosome 20 trisomy and is one of the more common chromosomal abnormalities found during prenatal diagnostic testing. Studies have shown that the child is normal in the vast majority of prenatally diagnosed individuals. However, features that have been reported include spinal abnormalities (including spinal stenosis, vertebral fusion, and kyphosis), hypotonia (decreased muscle tone), life long constipation, sloped shoulders, and significant learning disabilities despite normal intelligence. Trisomy 20 usually results from an error that occurs when an egg or sperm cell develops (before fertilization); mosaic trisomy 20 usually results from errors in cell division soon after fertilization.","definition_xrefs":["GARD:0005332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 trisomy","secondary_identifiers":["GARD:5332","MEDGEN:120542","MESH:C535372","UMLS:C0265479","NCIT:C36397"],"synonyms":[{"name":"mosaic trisomy 20","type":"related"},{"name":"trisomy 20","type":"related"},{"name":"trisomy 20 mosaicism","type":"related"},{"name":"trisomy chromosome 20","type":"related"}],"termid":"MONDO:0022757","xrefs":{"Monarch":{"xref_id":"0022757"}}}


id: GO:0097151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inhibitory postsynaptic potential (IPSP). IPSP is a temporary decrease in postsynaptic membrane potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:18550748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"modulation of inhibitory postsynaptic potential","termid":"GO:0098828"},{"relation_name":"positively_regulates","term_name":"inhibitory postsynaptic potential","termid":"GO:0060080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of inhibitory postsynaptic potential","synonyms":[{"name":"positive regulation of IPSP","type":"exact"},{"name":"positive regulation of inhibitory post-synaptic membrane potential","type":"exact"}],"termid":"GO:0097151"}


id: PATO:0001592
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased curvature","termid":"PATO:0001592"}


id: GO:0102357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: mithramycin + NADP = mithramycin DK + NADPH + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"mithramycin dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-13385"],"termid":"GO:0102357"}


id: MONDO:0002467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder affecting the inner ear. Causes are inner ear infections, head injuries, and neoplasms (e.g., acoustic schwannoma). Symptoms include dizziness, imbalance, nausea, and vision problems.","definition_xrefs":["NCIT:C27166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"},{"relation_name":"is_a","term_name":"disorder of ear","termid":"MONDO:0021205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner ear disorder","secondary_identifiers":["DOID:2952","MEDGEN:141671","EFO:0009672","UMLS:C0494559","ICD10CM:H80-H83","SCTID:232297009","MESH:D007759"],"synonyms":[{"name":"disease of internal ear","type":"exact"},{"name":"disease or disorder of internal ear","type":"exact"},{"name":"disorder of internal ear","type":"exact"},{"name":"inner Ear disorder","type":"exact"},{"name":"internal Ear disorder","type":"exact"},{"name":"internal ear disease","type":"exact"},{"name":"internal ear disease or disorder","type":"exact"},{"name":"labyrinthine disease","type":"exact"},{"name":"vestibular disorder","type":"narrow"}],"termid":"MONDO:0002467","xrefs":{"Monarch":{"xref_id":"0002467"}}}


id: PBO:0070994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 18","termid":"PBO:0070994"}


id: PBO:0002161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Tyr-tRNA deacylase (predicted)","termid":"PBO:0002161"}


id: MONDO:0029810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete laminopathy with striated muscle involvement (obsolete MONDO:0029810)","secondary_identifiers":["Orphanet:300755"],"termid":"MONDO:0029810","xrefs":{"Monarch":{"xref_id":"0029810"}}}


id: PBO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.29","termid":"PBO:0000752"}


id: PBO:0090171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate synthase Aro2","termid":"PBO:0090171"}


id: GO:0045436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of beta rings at one or both ends of the lycopene molecule (psi, psi-carotene) to form gamma-carotene or the bicyclic beta-carotene (beta, beta-carotene), respectively.","definition_xrefs":["PMID:8837512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0009975","GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lycopene beta cyclase activity","secondary_identifiers":["RHEA:32219","MetaCyc:RXN1F-150"],"synonyms":[{"name":"crtL","type":"related"},{"name":"lycopene cyclase","type":"broad"}],"termid":"GO:0045436"}


id: MONDO:0007234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchial myoclonus with spastic paraparesis and cerebellar ataxia","secondary_identifiers":["MEDGEN:349424","OMIM:113610","UMLS:C1862071","MESH:C566188"],"synonyms":[{"name":"branchial myoclonus with spastic paraparesis and cerebellar ataxia","type":"exact"}],"termid":"MONDO:0007234","xrefs":{"Monarch":{"xref_id":"0007234"}}}


id: MONDO:0004507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraductal papilloma of the breast characterized by the presence of focal epithelial atypia.","definition_xrefs":["NCIT:C36089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal breast papilloma","termid":"MONDO:0021097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical breast papilloma","secondary_identifiers":["UMLS:C1332346","DOID:8227","MEDGEN:233997"],"synonyms":[{"name":"atypical breast papilloma","type":"exact"}],"termid":"MONDO:0004507","xrefs":{"Monarch":{"xref_id":"0004507"}}}


id: MONDO:0009607
data:
  {"annotated_genes":["SJAG_03659"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87806],"is_not":false,"summary":null,"term":"MONDO:0009607"}]},"cv_name":"mondo","definition":"Hypermethioninemia due to methionine adenosyltransferase deficiency is a very rare metabolic disorder resulting in isolated hepatic hypermethioninemia that is usually benign due to partial inactivation of enzyme activity. Rarely patients have been found to have an odd odor or neurological disorders such as brain demyelination.","definition_xrefs":["Orphanet:168598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of methionine cycle and sulfur amino acid metabolism","termid":"MONDO:0019222"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03659":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"methionine adenosyltransferase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:75700","OMIM:250850","UMLS:C0268621","GARD:8397","NCIT:C123435"],"synonyms":[{"name":"MAT I/III deficiency","type":"exact"},{"name":"MAT deficiency","type":"exact"},{"name":"Mat I/III deficiency","type":"related"},{"name":"brain demyelination due to methionine adenosyltransferase deficiency","type":"exact"},{"name":"hypermethioninemia, isolated persistent","type":"related"},{"name":"hypermethioninemia, persistent, autosomal dominant, due to methionine adenosyltransferase I/III deficiency","type":"exact"},{"name":"isolated persistent hypermethioninemia","type":"exact"},{"name":"methionine adenosyltransferase I/III deficiency","type":"related"},{"name":"methionine adenosyltransferase deficiency","type":"exact"},{"name":"methionine adenosyltransferase deficiency, autosomal recessive","type":"exact"}],"termid":"MONDO:0009607","terms_by_termid":{"MONDO:0009607":null},"xrefs":{"Monarch":{"xref_id":"0009607"}}}


id: GO:1903847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:TermGenie","GO_REF:0000058","GOC:BHF_miRNA","PMID:22269326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aorta morphogenesis","termid":"GO:1903847"}


id: MONDO:0035466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nephrotic syndrome without extrarenal manifestations (obsolete MONDO:0035466)","secondary_identifiers":["Orphanet:567564"],"termid":"MONDO:0035466","xrefs":{"Monarch":{"xref_id":"0035466"}}}


id: PBO:0040159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASIC4 antisense RNA 1","termid":"PBO:0040159"}


id: MONDO:0020590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection due to organisms from the genus Mycobacteria.","definition_xrefs":["NCIT:C26831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycobacterial infectious disease","secondary_identifiers":["MESH:D009164","SCTID:88415009","MEDGEN:6479","UMLS:C0026918"],"synonyms":[{"name":"mycobacterial infection","type":"exact"},{"name":"mycobacteriosis","type":"exact"},{"name":"mycobacterium infection","type":"exact"}],"termid":"MONDO:0020590","xrefs":{"Monarch":{"xref_id":"0020590"}}}


id: MONDO:0012677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the KCNE2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 4","secondary_identifiers":["MESH:C566244","OMIM:611493","UMLS:C1862394","MEDGEN:400041","GARD:15516"],"synonyms":[{"name":"ATFB4","type":"related"},{"name":"KCNE2 familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 4","type":"exact"},{"name":"atrial fibrillation, familial, type 4","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in KCNE2","type":"exact"}],"termid":"MONDO:0012677","xrefs":{"Monarch":{"xref_id":"0012677"}}}


id: MONDO:0009714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myosclerosis is a rare, genetic, non-dystrophic myopathy characterized by early, diffuse, progressive muscle and joint contractures that result in severe limitation of movement of axial, proximal, and distal joints, walking difficulties in early childhood and toe walking. Patients typically present thin, sclerotic muscles with a woody consistency, mild girdle and proximal limb weakness with moderate distal weakness and scoliosis. Muscle biopsy shows partial collagen VI deficiency at the myofiber basement membrane and absent collagen VI around most endomysial/perimysial capillaries.","definition_xrefs":["Orphanet:289380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen 6-related myopathy","termid":"MONDO:0100225"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myosclerosis","secondary_identifiers":["GARD:17325","MedDRA:10064584","MESH:C564968","icd11.foundation:2105106550","MEDGEN:338098","OMIM:255600","SCTID:763895001","UMLS:C1850671"],"synonyms":[{"name":"congenital myosclerosis, LC6wenthal type","type":"exact"},{"name":"congenital myosclerosis, Löwenthal type","type":"exact"},{"name":"myopathy, myosclerotic","type":"related"},{"name":"myosclerosis, autosomal recessive","type":"related"},{"name":"myosclerosis, congenital","type":"exact"},{"name":"myosclerosis, congenital, of Lowenthal","type":"related"}],"termid":"MONDO:0009714","xrefs":{"Monarch":{"xref_id":"0009714"}}}


id: PATO:0005022
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diameter that remains constant throughout the extent of an entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diameter","termid":"PATO:0001334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uniform diameter","termid":"PATO:0005022"}


id: PBO:0084315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain family histone demethylase; promotes global demethylation of H3K4 and repression of noncoding intergenic transcription during sporulation; removes methyl groups added by Set1p; negatively regulated by H3K14 acetylation; protein levels regulated by Not4p polyubiquitin-mediated degradation; regulates sporulation timing by extending period of active transcription; regulates rDNA silencing; human homolog is JARID1C","termid":"PBO:0084315"}


id: FYPO:0004274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore release from an ascus does not occur.","definition_xrefs":["PomBase:mah","GO:0071998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished ascospore release from ascus","synonyms":[{"name":"absent ascospore release from ascus","type":"exact"},{"name":"ascospore release from ascus abolished","type":"exact"}],"termid":"FYPO:0004274"}


id: GO:0050028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminohexano-6-lactam + H2O = L-lysine.","definition_xrefs":["EC:3.5.2.11","RHEA:21388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"L-lysine-lactamase activity","secondary_identifiers":["MetaCyc:L-LYSINE-LACTAMASE-RXN","KEGG_REACTION:R00463"],"synonyms":[{"name":"L-alpha-aminocaprolactam hydrolase activity","type":"related"},{"name":"L-lysinamidase activity","type":"related"},{"name":"L-lysine-1,6-lactam lactamhydrolase activity","type":"related"}],"termid":"GO:0050028"}


id: MONDO:0020947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild to severe infections of the eye and its adjacent structures (adnexa) by adult or larval protozoan or metazoan parasites.","definition_xrefs":["MESH:D015822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"parasitic eye infection","secondary_identifiers":["MEDGEN:8752","SCTID:312418006","UMLS:C0015406","ICD9:136.9"],"synonyms":[{"name":"EYE INFECT PARASITIC","type":"related"},{"name":"Eye Infection, Parasitic","type":"related"},{"name":"Eye Infections, Parasitic","type":"related"},{"name":"Infection, Parasitic Eye","type":"related"},{"name":"Infection, Parasitic Ocular","type":"related"},{"name":"Infections, Parasitic Eye","type":"related"},{"name":"Infections, Parasitic Ocular","type":"related"},{"name":"OCULAR INFECT PARASITIC","type":"related"},{"name":"Ocular Infection, Parasitic","type":"related"},{"name":"Ocular Infections, Parasitic","type":"related"},{"name":"PARASITIC EYE INFECT","type":"related"},{"name":"Parasitic Eye Infection","type":"related"},{"name":"Parasitic Eye Infections","type":"related"},{"name":"Parasitic Ocular Infection","type":"related"},{"name":"Parasitic Ocular Infections","type":"related"},{"name":"Parasitic eye infection","type":"related"},{"name":"parasitic eye infection","type":"exact"}],"termid":"MONDO:0020947","xrefs":{"Monarch":{"xref_id":"0020947"}}}


id: MONDO:1011039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any oculocutaneous albinism that occurs in dogs due to a mutation in the SLC45A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, SLC45A2-related, dog","secondary_identifiers":["OMIA:001821-9615"],"synonyms":[{"name":"coat color albinism, oculocutaneous type IV, dog","type":"related"}],"termid":"MONDO:1011039","xrefs":{"Monarch":{"xref_id":"1011039"}}}


id: PBO:0034117
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-supplies","termid":"PBO:0034117"}


id: MONDO:0001985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A partial occlusion of the retinal artery.","definition_xrefs":["NCIT:C35192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal artery occlusion","termid":"MONDO:0006948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"partial arterial retinal occlusion","secondary_identifiers":["ICD9:362.33","MEDGEN:57599","UMLS:C0154839","DOID:14522","SCTID:776009"],"synonyms":[{"name":"partial retinal arterial occlusion","type":"exact"},{"name":"retinal partial arterial occlusion","type":"exact"}],"termid":"MONDO:0001985","xrefs":{"Monarch":{"xref_id":"0001985"}}}


id: GO:0075312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangium development, a process that leads to the formation of sporangium, a single-celled or many-celled structure in which spores are produced, as in fungi, algae, mosses, and ferns, gymnosperms, angiosperms.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"negatively_regulates","term_name":"sporangium development","termid":"GO:0043582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangium development","termid":"GO:0075312"}


id: GO:0051746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of 3(S)-oxidosqualene to (3S,13S,14R)-malabarica-8,17,21-trien-3-ol (thalianol).","definition_xrefs":["RHEA:26160","PMID:15125655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"thalianol synthase activity","secondary_identifiers":["EC:5.4.99.31"],"termid":"GO:0051746"}


id: FYPO:0005063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 4 of histone H3 at the mating type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K4 methylation at mating type locus during vegetative growth","synonyms":[{"name":"increased histone H3 K4 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 methylation at mating type locus during mitotic cell cycle","type":"related"},{"name":"increased histone H3K4 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3K4me at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 methylation at mating type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005063"}


id: SO:1001273
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-canonical start codon of sequence CTG.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_canonical_start_codon","termid":"SO:0000680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTG_start_codon","synonyms":[{"name":"CTG start codon","type":"exact"}],"termid":"SO:1001273"}


id: GO:0006810
data:
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id: GO:1904406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nitric oxide metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11991626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"negatively_regulates","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric oxide metabolic process","synonyms":[{"name":"down regulation of nitric oxide metabolic process","type":"exact"},{"name":"down regulation of nitric oxide metabolism","type":"exact"},{"name":"down-regulation of nitric oxide metabolic process","type":"exact"},{"name":"down-regulation of nitric oxide metabolism","type":"exact"},{"name":"downregulation of nitric oxide metabolic process","type":"exact"},{"name":"downregulation of nitric oxide metabolism","type":"exact"},{"name":"inhibition of nitric oxide metabolic process","type":"narrow"},{"name":"inhibition of nitric oxide metabolism","type":"narrow"},{"name":"negative regulation of nitric oxide metabolism","type":"exact"}],"termid":"GO:1904406"}


id: PBO:0001173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA/TPR/DNAJ domain protein Ucp7","termid":"PBO:0001173"}


id: PBO:0067824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 126","termid":"PBO:0067824"}


id: MONDO:0006963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the sebaceous glands. Representative examples include sebaceous adenoma and sebaceous carcinoma.","definition_xrefs":["NCIT:C3363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sebaceous gland neoplasm","secondary_identifiers":["SCTID:126491004","UMLS:C0036503","DOID:5759","MEDGEN:19911","MESH:D012626","EFO:1001172","ICD9:239.2"],"synonyms":[{"name":"neoplasm of sebaceous gland","type":"exact"},{"name":"sebaceous gland neoplasm","type":"exact"},{"name":"sebaceous gland neoplasm (disease)","type":"exact"},{"name":"sebaceous gland tumor","type":"exact"},{"name":"sebaceous gland tumour","type":"exact"},{"name":"sebaceous neoplasm","type":"exact"},{"name":"sebaceous tumor","type":"exact"},{"name":"sebaceous tumour","type":"exact"},{"name":"tumor of sebaceous gland","type":"exact"},{"name":"tumour of sebaceous gland","type":"exact"}],"termid":"MONDO:0006963","xrefs":{"Monarch":{"xref_id":"0006963"}}}


id: PBO:0051333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-29","termid":"PBO:0051333"}


id: MONDO:0003419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign neoplasm that arises from the Bartholin gland and is characterized by the presence of clustered glands and tubules lined by mucin-secreting epithelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartholin gland benign neoplasm","termid":"MONDO:0002193"},{"relation_name":"is_a","term_name":"vulvar glandular neoplasm","termid":"MONDO:0002198"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bartholin gland adenoma","secondary_identifiers":["NCIT:C40299","DOID:5382","MEDGEN:267025","UMLS:C1511048"],"synonyms":[{"name":"Bartholin gland adenoma","type":"exact"},{"name":"Bartholin's gland adenoma","type":"exact"},{"name":"major vestibular gland adenoma","type":"exact"}],"termid":"MONDO:0003419","xrefs":{"Monarch":{"xref_id":"0003419"}}}


id: GO:0009769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"After a photon of light is absorbed by one of the many chlorophyll molecules, in one of the light-harvesting complexes of an antenna on photosystem II, some of the absorbed energy is transferred to the pair of chlorophyll molecules in the reaction center.","definition_xrefs":["ISBN:0716731363","ISBN:0816017360","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthesis, light harvesting","termid":"GO:0009765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthesis, light harvesting in photosystem II","termid":"GO:0009769"}


id: PBO:0072255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 30","termid":"PBO:0072255"}


id: MONDO:0005886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the mucosal lining of the mouth with the fungus Candida albicans.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oral candidiasis","secondary_identifiers":["SCTID:79740000","DOID:14262","NCIT:C28137","EFO:0007406","ICD9:112.0","MESH:D002180","UMLS:C0006849","MEDGEN:14300"],"synonyms":[{"name":"candidiasis of mouth","type":"exact"},{"name":"mouth candidiasis","type":"exact"},{"name":"oral moniliasis","type":"exact"},{"name":"thrush","type":"broad"},{"name":"thrush, oral","type":"exact"}],"termid":"MONDO:0005886","xrefs":{"Monarch":{"xref_id":"0005886"}}}


id: GO:0047049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxystearate + NAD+ = 2-oxostearate + H+ + NADH.","definition_xrefs":["EC:1.1.1.98","RHEA:15949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(R)-2-hydroxy-fatty acid dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03021","MetaCyc:1.1.1.98-RXN"],"synonyms":[{"name":"(R)-2-hydroxy-fatty-acid dehydrogenase activity","type":"exact"},{"name":"(R)-2-hydroxystearate:NAD+ oxidoreductase activity","type":"related"},{"name":"2-hydroxy fatty acid oxidase","type":"broad"},{"name":"D-2-hydroxy fatty acid dehydrogenase activity","type":"related"}],"termid":"GO:0047049"}


id: FYPO:0008230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the MPS1 barrier located in the mating-type region is normal (i.e. indistinguishable from wild-type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal replication fork arrest","termid":"FYPO:0008191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal replication fork arrest at MPS1 barrier","termid":"FYPO:0008230"}


id: PATO:0001233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the back or upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal to","synonyms":[{"name":"dorsal","type":"exact"},{"name":"posterior_to (human torso)","type":"exact"},{"name":"superior_to (human head)","type":"exact"}],"termid":"PATO:0001233"}


id: GO:0004217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity close to that of papain. As compared to cathepsin B, cathepsin L exhibits higher activity towards protein substrates, but has little activity on Z-Arg-Arg-NHMec, and no peptidyl-dipeptidase activity.","definition_xrefs":["EC:3.4.22.15"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin L activity (obsolete GO:0004217)","synonyms":[{"name":"Aldrichina grahami cysteine proteinase","type":"narrow"},{"name":"cathepsin L activity","type":"exact"}],"termid":"GO:0004217"}


id: PBO:0079423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 6","termid":"PBO:0079423"}


id: GO:0043200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups.","definition_xrefs":["GOC:mlg","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amino acid","secondary_identifiers":["GO:0010237"],"synonyms":[{"name":"response to amino acid stimulus","type":"exact"}],"termid":"GO:0043200"}


id: GO:1905784
data:
  {"annotated_genes":["SJAG_03048","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[90785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anaphase-promoting complex-dependent catabolic process.","definition_xrefs":["GO_REF:0000058","PMID:10921876","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"regulates","term_name":"anaphase-promoting complex-dependent catabolic process","termid":"GO:0031145"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of anaphase-promoting complex-dependent catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-176408"],"termid":"GO:1905784","terms_by_termid":{"GO:1905785":null,"GO:1905786":null}}


id: PBO:0046403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.2","termid":"PBO:0046403"}


id: PBO:0004669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZNF_U1","termid":"PBO:0004669"}


id: GO:1900655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of diorcinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"diorcinol biosynthetic process","termid":"GO:1900572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of diorcinol biosynthetic process","synonyms":[{"name":"regulation of diorcinol anabolism","type":"exact"},{"name":"regulation of diorcinol biosynthesis","type":"exact"},{"name":"regulation of diorcinol formation","type":"exact"},{"name":"regulation of diorcinol synthesis","type":"exact"}],"termid":"GO:1900655"}


id: SO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post_transcriptionally modified base.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base","termid":"SO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_RNA_base_feature","synonyms":[{"name":"modified RNA base feature","type":"exact"}],"termid":"SO:0000250"}


id: PBO:0068921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 164, pseudogene","termid":"PBO:0068921"}


id: PBO:0062568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AG member 1","termid":"PBO:0062568"}


id: PR:Q10314
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G8.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.02","synonyms":[{"name":"Spom972h-SPAC17G8.02","type":"exact"}],"termid":"PR:Q10314"}


id: GO:0002936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the peptide hormone bradykinin.","definition_xrefs":["PMID:11226291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bradykinin biosynthetic process","termid":"GO:0002936"}


id: GO:0080069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7-methylthioheptyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 7-methylthioheptyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"gene_count":0,"genotype_count":0,"name":"obsolete 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity (obsolete GO:0080069)","termid":"GO:0080069"}


id: MONDO:0011846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bulimia nervosa","termid":"MONDO:0005452"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bulimia nervosa, susceptibility to, 1","secondary_identifiers":["UMLS:C1843776","MEDGEN:334832","OMIM:607499"],"synonyms":[{"name":"BN","type":"related"},{"name":"BULN","type":"related"},{"name":"BULN1","type":"exact"},{"name":"BULN2","type":"related"},{"name":"anorexia nervosa, susceptibility to, 2","type":"related"},{"name":"bulimia nervosa, susceptibility to","type":"broad"},{"name":"bulimia nervosa, susceptibility to, 1","type":"exact"},{"name":"bulimia nervosa, susceptibility to, 2","type":"exact"},{"name":"bulimia nervosa, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to bulimia nervosa 2","type":"exact"}],"termid":"MONDO:0011846","xrefs":{"Monarch":{"xref_id":"0011846"}}}


id: PBO:0061144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 family member 7","termid":"PBO:0061144"}


id: PBO:0027553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_at_replication_origin","termid":"PBO:0027553"}


id: GO:0003887
data:
  {"annotated_genes":["SJAG_05239","SJAG_03906","SJAG_00814","SJAG_00153","SJAG_05197","SJAG_02818","SJAG_16460","SJAG_04089","SJAG_04791","SJAG_00611","SJAG_02658","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58503,72200,75021,75785,76612,76638,76860,78668,79466,79766,104751,104802],"is_not":false,"summary":null,"term":"GO:0003887"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time.","definition_xrefs":["GOC:vw","EC:2.7.7.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase activity","termid":"GO:0034061"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_02658":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04791":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140097","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"DNA-directed DNA polymerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DNA-DIRECTED-DNA-POLYMERASE-RXN","Reactome:R-HSA-5691001","Reactome:R-HSA-174444","GO:0016450","Reactome:R-HSA-5655892","Reactome:R-HSA-9710480","Reactome:R-HSA-111253","Reactome:R-HSA-68950","Reactome:R-HSA-5358579","Reactome:R-HSA-164505","GO:0015999","GO:0016000","GO:0003889","GO:0016452","Reactome:R-HSA-164513","Reactome:R-HSA-5655965","Reactome:R-HSA-9914498","GO:0016451","Reactome:R-HSA-110317","Reactome:R-HSA-5649723","Reactome:R-HSA-5656148","Reactome:R-HSA-5656158","GO:0016449","Reactome:R-HSA-9914364","GO:0019984","Reactome:R-HSA-6786166","Reactome:R-HSA-174427","Reactome:R-HSA-5687640","GO:0003888","GO:0003895","Reactome:R-HSA-5649883","Reactome:R-HSA-5693593","GO:0003893","GO:0016448","Reactome:R-HSA-110311","Reactome:R-HSA-69116","Reactome:R-HSA-73932","Reactome:R-HSA-5687360","Reactome:R-HSA-5653840","GO:0003890","GO:0003891","GO:0003894","Reactome:R-HSA-110368","Reactome:R-HSA-110319","Reactome:R-HSA-6782208","GO:0008723"],"synonyms":[{"name":"DNA duplicase activity","type":"related"},{"name":"DNA nucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"DNA polymerase I","type":"narrow"},{"name":"DNA polymerase II","type":"narrow"},{"name":"DNA polymerase III","type":"narrow"},{"name":"DNA polymerase V activity","type":"narrow"},{"name":"DNA polymerase alpha","type":"narrow"},{"name":"DNA polymerase beta","type":"narrow"},{"name":"DNA polymerase gamma","type":"narrow"},{"name":"DNA replicase activity","type":"related"},{"name":"DNA-dependent DNA polymerase activity","type":"related"},{"name":"Klenow fragment","type":"narrow"},{"name":"Taq DNA polymerase","type":"narrow"},{"name":"Taq Pol I","type":"narrow"},{"name":"Tca DNA polymerase","type":"narrow"},{"name":"alpha DNA polymerase activity","type":"narrow"},{"name":"beta DNA polymerase activity","type":"narrow"},{"name":"delta DNA polymerase activity","type":"narrow"},{"name":"deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"deoxyribonucleic acid duplicase activity","type":"related"},{"name":"deoxyribonucleic duplicase activity","type":"related"},{"name":"deoxyribonucleic polymerase I","type":"narrow"},{"name":"duplicase","type":"broad"},{"name":"epsilon DNA polymerase activity","type":"narrow"},{"name":"eta DNA polymerase activity","type":"narrow"},{"name":"gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"iota DNA polymerase activity","type":"narrow"},{"name":"kappa DNA polymerase activity","type":"narrow"},{"name":"lambda DNA polymerase activity","type":"narrow"},{"name":"mu DNA polymerase activity","type":"narrow"},{"name":"nu DNA polymerase activity","type":"narrow"},{"name":"sequenase","type":"related"},{"name":"sigma DNA polymerase activity","type":"narrow"},{"name":"theta DNA polymerase activity","type":"narrow"},{"name":"zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:0003887","terms_by_termid":{"GO:0003887":null}}


id: FYPO:0003556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the termination of RNA transcription from a DNA template is abnormal.","definition_xrefs":["GO:0006353","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription during vegetative growth","termid":"FYPO:0004064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"abnormal transcription termination","synonyms":[{"name":"abnormal DNA-templated transcription, termination","type":"exact"},{"name":"abnormal termination of transcription","type":"exact"},{"name":"abnormal transcription termination during mitotic cell cycle","type":"related"},{"name":"abnormal transcription termination during vegetative growth","type":"exact"}],"termid":"FYPO:0003556"}


id: MOD:01461
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-alanine alpha amino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated alanine","termid":"MOD:00665"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated alanine","termid":"MOD:01461"}


id: MONDO:0020154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete microblepharon-ablephara syndrome (obsolete MONDO:0020154)","secondary_identifiers":["Orphanet:98563"],"termid":"MONDO:0020154","xrefs":{"Monarch":{"xref_id":"0020154"}}}


id: FYPO:0007302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is too low to detect when the cell is subject to heat shock. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah","PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein absent from cell during vegetative growth","termid":"FYPO:0001984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"protein absent from cell during heat shock","synonyms":[{"name":"protein absent from cell during heat shock during mitotic cell cycle","type":"related"},{"name":"protein absent from cell during heat shock during vegetative growth","type":"exact"},{"name":"undetectable cellular protein level during heat shock","type":"exact"}],"termid":"FYPO:0007302"}


id: PBO:0061789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 1","termid":"PBO:0061789"}


id: PBO:0066488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A","termid":"PBO:0066488"}


id: PR:O74379
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3H7.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S26B, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.04","synonyms":[{"name":"Spom972h-SPBC3H7.04","type":"exact"}],"termid":"PR:O74379"}


id: GO:0102317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(methylamino)butyric acid + O2 + H2O = gamma-aminobutyric acid + formaldehyde + hydrogen peroxide.","definition_xrefs":["GOC:pz","EC:1.5.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-methylaminobutyrate oxidase (demethylating) activity","secondary_identifiers":["MetaCyc:RXN-13067","RHEA:33907"],"termid":"GO:0102317"}


id: PBO:0067072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 101, pseudogene","termid":"PBO:0067072"}


id: GO:2000033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed dormancy process.","definition_xrefs":["ISBN:9781405139830","GOC:obol","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed maturation","termid":"GO:2000034"},{"relation_name":"regulates","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed dormancy process","synonyms":[{"name":"regulation of seed dormancy","type":"related"}],"termid":"GO:2000033"}


id: PBO:0039775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7B","termid":"PBO:0039775"}


id: PBO:0012249
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Loss Of Zinc sensing","termid":"PBO:0012249"}


id: GO:0102707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-alanine + S-adenosyl-L-methionine = H+ + N-methyl-beta-alanine + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosyl-L-methionine:beta-alanine N-methyltransferase activity (obsolete GO:0102707)","termid":"GO:0102707"}


id: PBO:0080753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-C motif chemokine ligand 1","termid":"PBO:0080753"}


id: PBO:0052026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctophilin 4","termid":"PBO:0052026"}


id: PBO:0068868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 108, pseudogene","termid":"PBO:0068868"}


id: PBO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy C terminal domain family protein (predicted)","termid":"PBO:0000410"}


id: GO:0035618
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A long, thin projection from a root epidermal cell that contains F-actin and tubulin, and a cell wall.","definition_xrefs":["PO:0000256","PMID:24982600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"root hair","termid":"GO:0035618"}


id: PATO:0001538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solubility quality inhering in a substance by virtue of the bearer's inability of a substance to dissolve in a liquid.","definition_xrefs":["edp:edp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solubility","termid":"PATO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insoluble in","synonyms":[{"name":"insoluble","type":"exact"}],"termid":"PATO:0001538"}


id: FYPO:0008182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding by a gene product to the Spt5 CTD domain is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased Spt5-CTD binding","termid":"FYPO:0008182"}


id: GO:0098585
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host synaptic vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"},{"relation_name":"part_of","term_name":"host cell synaptic vesicle","termid":"GO:0098584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell synaptic vesicle membrane","termid":"GO:0098585"}


id: FYPO:0003859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to wortmannin. Cells stop growing (and may die) at a concentration of wortmannin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to wortmannin","synonyms":[{"name":"hypersensitive to wortmannin","type":"exact"},{"name":"sensitive to wortmannin during mitotic cell cycle","type":"related"},{"name":"sensitive to wortmannin during vegetative growth","type":"exact"}],"termid":"FYPO:0003859"}


id: PBO:0050613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 6","termid":"PBO:0050613"}


id: GO:0097486
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the outermost membrane of a multivesicular body.","definition_xrefs":["GOC:pde","PMID:21183070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late endosome lumen","termid":"GO:0031906"},{"relation_name":"part_of","term_name":"multivesicular body","termid":"GO:0005771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"multivesicular body lumen","termid":"GO:0097486"}


id: MONDO:0019270
data:
  {"annotated_genes":["SJAG_00379","SJAG_02488","SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[87027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012251"},{"annotations":[87481,87480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"}]},"cv_name":"mondo","definition":"An umbrella term for a group of rare genetic skin disorders characterized by well-demarcated plaques of reddened, dry and thickened skin. Typically, these lesions are distributed symmetrically on the body and tend to slowly expand and progress over time.","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01356":null,"SJAG_02488":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratoderma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10015280","SCTID:254215005","ICD9:757.39","Orphanet:79355","UMLS:C0432330","GARD:18986","MEDGEN:609461"],"termid":"MONDO:0019270","terms_by_termid":{"MONDO:0007574":null,"MONDO:0012251":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0019270"}}}


id: MONDO:1011906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder, non-human animal","termid":"MONDO:1011365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic uremic syndrome, non-human animal","secondary_identifiers":["OMIA:000435"],"termid":"MONDO:1011906","xrefs":{"Monarch":{"xref_id":"1011906"}}}


id: PBO:0090446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exopolyphosphatase, prune Ppx1","termid":"PBO:0090446"}


id: MONDO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a cartilage tissue.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cartilage cancer","secondary_identifiers":["DOID:0060102","GARD:6004","MEDGEN:1843449","UMLS:C4290064"],"synonyms":[{"name":"cancer of cartilage tissue","type":"exact"},{"name":"cartilage tissue cancer","type":"exact"},{"name":"cartilaginous cancer","type":"exact"},{"name":"malignant cartilage tissue neoplasm","type":"exact"},{"name":"malignant neoplasm of cartilage tissue","type":"exact"}],"termid":"MONDO:0000639","xrefs":{"Monarch":{"xref_id":"0000639"}}}


id: MONDO:0009783
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88181],"is_not":false,"summary":null,"term":"MONDO:0009783"}]},"cv_name":"mondo","definition":"Any autosomal recessive progressive external ophthalmoplegia in which the cause of the disease is a mutation in the POLG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"},{"relation_name":"is_a","term_name":"autosomal recessive progressive external ophthalmoplegia","termid":"MONDO:0016810"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002320","MONDO:0006025","MONDO:0005336","MONDO:0004069"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111522","MEDGEN:897191","OMIM:258450","GARD:15215","UMLS:C4225153"],"synonyms":[{"name":"PEOB1","type":"related"},{"name":"POLG autosomal recessive progressive external ophthalmoplegia","type":"exact"},{"name":"arPEO","type":"related"},{"name":"autosomal recessive progressive external ophthalmoplegia","type":"related"},{"name":"autosomal recessive progressive external ophthalmoplegia caused by mutation in POLG","type":"exact"},{"name":"cerebellar ataxia infantile with progressive external ophthalmoplegia","type":"related"},{"name":"progressive external ophthalmoplegia with cerebellar ataxia infantile","type":"related"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 1","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive type 1","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 1","type":"related"}],"termid":"MONDO:0009783","terms_by_termid":{"MONDO:0009783":null},"xrefs":{"Monarch":{"xref_id":"0009783"}}}


id: PBO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin family","termid":"PBO:0000979"}


id: GO:0061211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a collecting duct in the mesonephros over time, from its formation to the mature structure. The collecting duct regulates water, electrolyte and acid-base balance. The collecting duct is the final common path through which urine flows before entering the ureter and then emptying into the bladder.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collecting duct development","termid":"GO:0072044"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric collecting duct development","termid":"GO:0061211"}


id: PBO:0063981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 15","termid":"PBO:0063981"}


id: SO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An absolute reference to the strand. When a chromosome has p and q arms, the Crick strand is the strand whose 5'-end is on the long arm of the chromosome. Of note, the term 'minus strand' is typically based on a reference sequence where it's preferred for the minus strand to be the Crick strand, but might not be and 'minus strand' is therefore not an exact synonym.","definition_xrefs":["PMID:21303550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crick_strand","synonyms":[{"name":"Bottom strand","type":"exact"},{"name":"Crick strand","type":"exact"},{"name":"Minus strand","type":"broad"},{"name":"Reverse strand","type":"exact"}],"termid":"SO:0002263"}


id: MONDO:0003941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromophobe renal cell carcinoma","termid":"MONDO:0017885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"classic variant of chromophobe renal cell carcinoma","secondary_identifiers":["NCIT:C27888","DOID:6605","MEDGEN:232080","UMLS:C1333062"],"synonyms":[{"name":"classic variant of chromophobe renal cell carcinoma","type":"exact"}],"termid":"MONDO:0003941","xrefs":{"Monarch":{"xref_id":"0003941"}}}


id: GO:0033405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UCU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0060090","GO:0003723"],"is_obsolete":false,"name":"UCU codon-amino acid adaptor activity","synonyms":[{"name":"TCT codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033405"}


id: PATO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000416 count value (obsolete PATO:0000416)","termid":"PATO:0000416"}


id: PBO:0061739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 2 pseudogene 1","termid":"PBO:0061739"}


id: PR:O74343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pseudouridylate synthase 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13326:SF0","OMA:SCHPO03082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase C1A4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.09","secondary_identifiers":["UniProtKB:O74343"],"synonyms":[{"name":"Spom972h-PUS7","type":"exact"}],"termid":"PR:O74343"}


id: GO:0102065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphoric acid + gamma-patchoulene.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete patchoulene synthase activity (obsolete GO:0102065)","termid":"GO:0102065"}


id: MONDO:0019488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare epilepsy syndrome characterized by recurrent, long-lasting myoclonic status in infants and young children with a non-progressive encephalopathy, associated with transient and recurring motor, cognitive and/or behavioral disturbances.","definition_xrefs":["Orphanet:86913"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"},{"relation_name":"is_a","term_name":"myoclonic epilepsy","termid":"MONDO:0100577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"myoclonic epilepsy in non-progressive encephalopathies","secondary_identifiers":["UMLS:C4755298","GARD:19088","MEDGEN:1661865"],"synonyms":[{"name":"myoclonic status in non-progressive encephalopathies","type":"exact"},{"name":"myoclonus epilepsy in non-progressive encephalopathies","type":"exact"}],"termid":"MONDO:0019488","xrefs":{"Monarch":{"xref_id":"0019488"}}}


id: PBO:0109814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bcap family homolog, vesicle-mediated transport factor","termid":"PBO:0109814"}


id: PBO:0051581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor E","termid":"PBO:0051581"}


id: PBO:0042810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic endogenous regulator of oxidative phosphorylation 1","termid":"PBO:0042810"}


id: RO:0002552
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in the end of s if p results in a change of state in s whereby s either ceases to exist, or s becomes functionally impaired or s has its fate committed such that it is put on a path to be degraded.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_ending_of","termid":"RO:0002552"}


id: MONDO:0010026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SHORT syndrome is a rare inherited condition of multiple anomalies whose name stands for short stature, hyperextensibility of joints, ocular depression, Rieger anomaly and teething delay which, along with mild intrauterine growth restriction, partial lipodystrophy, delayed bone age, hernias and progeroid appearance, are manifestations of the disease.","definition_xrefs":["Orphanet:3163"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"SHORT syndrome","secondary_identifiers":["UMLS:C0878684","icd11.foundation:1264512044","NORD:1710","DOID:0111454","MESH:C537327","OMIM:269880","MEDGEN:164212","GARD:7633"],"synonyms":[{"name":"Aarskog-Ose-Pande syndrome","type":"exact"},{"name":"Rieger anomaly-partial lipodystrophy syndrome","type":"exact"},{"name":"SHORT syndrome","type":"exact"},{"name":"lipodystrophy, partial, with Rieger anomaly and short stature","type":"related"},{"name":"lipodystrophy-Rieger anomaly-diabetes syndrome","type":"exact"},{"name":"partial lipodystrophy with Rieger anomaly and short stature","type":"related"},{"name":"short stature, hyperextensibility, hernia, ocular depression, Rieger anomaly and teething delay","type":"related"},{"name":"short stature, hyperextensibility, hernia, ocular depression, Rieger anomaly, and teething delay","type":"related"},{"name":"short syndrome","type":"exact"}],"termid":"MONDO:0010026","xrefs":{"Monarch":{"xref_id":"0010026"}}}


id: PBO:0031183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mating_efficiency","termid":"PBO:0031183"}


id: MOD:01609
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 7'-hydroxy-2'-alpha-mannosyl-L-tryptophan.","definition_xrefs":["RESID:AA0506","PubMed:19584055"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"2'-alpha-mannosyl-L-tryptophan","termid":"MOD:00222"},{"relation_name":"has_functional_parent","term_name":"7'-hydroxy-L-tryptophan","termid":"MOD:01664"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7'-hydroxy-2'-alpha-mannosyl-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-[7-hydroxy-2-(alpha-D-mannopyranosyl)-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"7'-hydroxy-2'-alpha-mannosyl-L-tryptophan","type":"exact"},{"name":"CARBOHYD C-linked (Man) hydroxytryptophan","type":"exact"}],"termid":"MOD:01609"}


id: MONDO:0012246
data:
  {"annotated_genes":["SJAG_01438","SJAG_05332"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87035,87036],"is_not":false,"summary":null,"term":"MONDO:0012246"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia type 26 (SCA26) is a very rare subtype of autosomal dominant cerebellar ataxia type III (ADCA type III) characterized by late-onset and slowly progressive cerebellar signs (gait ataxia) and eye movement abnormalities.","definition_xrefs":["Orphanet:101112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01438":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 26","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:373077","OMIM:609306","SCTID:718769009","GARD:9995","UMLS:C1836395","MESH:C537203","DOID:0050975","icd11.foundation:586976339"],"synonyms":[{"name":"SCA26","type":"exact"},{"name":"spinocerebellar ataxia 26","type":"related"},{"name":"spinocerebellar ataxia type 26","type":"exact"}],"termid":"MONDO:0012246","terms_by_termid":{"MONDO:0012246":null},"xrefs":{"Monarch":{"xref_id":"0012246"}}}


id: GO:1904725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any TFIIB-class transcription factor binding that is involved in negative regulation of DNA-templated transcription.","definition_xrefs":["GOC:rb","GOC:TermGenie","GO_REF:0000061","PMID:12461786"],"gene_count":0,"genotype_count":0,"name":"obsolete TFIIB-class transcription factor binding involved in negative regulation of transcription (obsolete GO:1904725)","synonyms":[{"name":"TFIIB-class transcription factor binding involved in down regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in down regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in down-regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in down-regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in downregulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in downregulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in inhibition of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in inhibition of transcription, DNA-dependent","type":"narrow"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of transcription, DNA-templated","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in transcription repressor activity","type":"related"}],"termid":"GO:1904725"}


id: PBO:0054212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1592","termid":"PBO:0054212"}


id: GO:1905246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of aspartic-type peptidase activity.","definition_xrefs":["GOC:jl","GOC:TermGenie","GO_REF:0000059","PMID:21745575"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of aspartic-type peptidase activity (obsolete GO:1905246)","synonyms":[{"name":"down regulation of aspartic-type peptidase activity","type":"exact"},{"name":"down-regulation of aspartic-type peptidase activity","type":"exact"},{"name":"downregulation of aspartic-type peptidase activity","type":"exact"},{"name":"inhibition of aspartic-type peptidase activity","type":"narrow"},{"name":"pepsin inhibitor","type":"related"}],"termid":"GO:1905246"}


id: PBO:0042173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 3","termid":"PBO:0042173"}


id: MONDO:1010198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotonic dystrophy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotonic dystrophy, non-human animal","secondary_identifiers":["OMIA:000699"],"termid":"MONDO:1010198","xrefs":{"Monarch":{"xref_id":"1010198"}}}


id: PR:Q9USH1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13186:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.03c","secondary_identifiers":["UniProtKB:Q9USH1"],"synonyms":[{"name":"SPCP31B10.03c","type":"related"},{"name":"Spom972h-MED31","type":"exact"},{"name":"cell separation protein sep10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator complex subunit 31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sep10","type":"related"},{"name":"soh1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USH1"}


id: MONDO:0100421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly GATA1 gene mutation. (A change in the nucleotide sequence of the GATA1 gene.)","definition_xrefs":["NCIT:C82340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, GATA1 gene mutation","synonyms":[{"name":"AML, ERYF1 Gene Mutation","type":"exact"},{"name":"AML, GATA Binding Protein 1 Gene Mutation","type":"exact"},{"name":"AML, GATA-1 Gene Mutation","type":"exact"},{"name":"AML, GATA1 Mutation","type":"exact"},{"name":"AML, GATA1 gene mutation","type":"exact"},{"name":"AML, GF-1 Gene Mutation","type":"exact"},{"name":"AML, GF1 Gene Mutation","type":"exact"},{"name":"AML, NF-E1 Gene Mutation","type":"exact"},{"name":"AML, NFE1 Gene Mutation","type":"exact"}],"termid":"MONDO:0100421","xrefs":{"Monarch":{"xref_id":"0100421"}}}


id: GO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a natural killer cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"},{"relation_name":"is_a","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"natural killer cell cytokine production","synonyms":[{"name":"NK cell cytokine production","type":"exact"}],"termid":"GO:0002370"}


id: PBO:0060289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 6","termid":"PBO:0060289"}


id: GO:0005504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a fatty acid, an aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"fatty acid binding","termid":"GO:0005504"}


id: GO:0102998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5-oxo-2-sulfonato-2,5-dihydrofuran-2-yl)acetate + H2O = maleylacetate + sulfite + 2 H+.","definition_xrefs":["EC:3.1.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"4-sulfomuconolactone hydrolase activity","secondary_identifiers":["MetaCyc:RXN-9733","RHEA:33711","UM-BBD_reactionID:r0583"],"termid":"GO:0102998"}


id: GO:0046936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyadenosine + H+ + H2O = 2'-deoxyinosine + NH4+.","definition_xrefs":["GOC:ai","RHEA:28190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"2'-deoxyadenosine deaminase activity","secondary_identifiers":["MetaCyc:ADDALT-RXN"],"synonyms":[{"name":"deoxyadenosine deaminase reaction","type":"exact"}],"termid":"GO:0046936"}


id: GO:0043695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a pheromone stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to pheromone","termid":"GO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of pheromone","termid":"GO:0043695"}


id: PBO:0047455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and double SH3 domains 2","termid":"PBO:0047455"}


id: PBO:0002416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor Spt6 (predicted)","termid":"PBO:0002416"}


id: PBO:0053831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1096","termid":"PBO:0053831"}


id: PR:O14097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain-containing protein C2F3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.14c","synonyms":[{"name":"Spom972h-saf2","type":"exact"}],"termid":"PR:O14097"}


id: PBO:0085537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S8, no bacterial homolog; RPS8A has a paralog, RPS8B, that arose from the whole genome duplication","termid":"PBO:0085537"}


id: FYPO:0004417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to phosphate starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to phosphate starvation","synonyms":[{"name":"normal RNA accumulation during cellular response to phosphate starvation","type":"related"},{"name":"normal RNA level during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"normal RNA level during phosphate starvation","type":"exact"},{"name":"normal mRNA level during cellular response to phosphate starvation","type":"narrow"},{"name":"normal transcript level during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0004417"}


id: PBO:0069452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 717, pseudogene","termid":"PBO:0069452"}


id: FYPO:0003322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of succinate dehydrogenase (ubiquinone) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal succinate dehydrogenase (ubiquinone) activity","termid":"FYPO:0003322"}


id: PBO:0082340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 5' to 3' RNA/DNA and DNA helicase; subunit of the exosome-associated Nrd1p complex that mediates 3' end formation of snRNAs, snoRNAs, CUTs and some mRNAs; helicase-independent role in transcription-coupled repair; coordinates replication with transcription, associating with moving forks and preventing errors that occur when forks encounter transcribed regions; homolog of Senataxin, implicated in Ataxia-Oculomotor Apraxia 2 and a dominant form of juvenile ALS","termid":"PBO:0082340"}


id: FYPO:0003248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured at centromere inner repeat regions is higher than normal.","definition_xrefs":["PomBase:mah","PMID:22291963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of histone H3 at centromere inner repeat","synonyms":[{"name":"increased level of histone H3 at centromere imr","type":"exact"},{"name":"increased level of histone H3 at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased level of histone H3 at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003248"}


id: PBO:0080600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 35","termid":"PBO:0080600"}


id: GO:0016992
data:
  {"annotated_genes":["SJAG_03553"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76798],"is_not":false,"summary":null,"term":"GO:0016992"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein N6-(octanoyl)lysine + 2 sulfur + 2 S-adenosyl-L-methionine = protein N6-(lipoyl)lysine + 2 L-methionine + 2 5'-deoxyadenosyl.","definition_xrefs":["PMID:18307109","EC:2.8.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"lipoate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN0-949","Reactome:R-HSA-6793591","RHEA:16585","GO:0017140"],"synonyms":[{"name":"LS","type":"related"},{"name":"LipA","type":"related"},{"name":"lipoic acid synthase","type":"exact"},{"name":"lipoyl synthase activity","type":"related"},{"name":"protein 6-N-(octanoyl)lysine:sulfur sulfurtransferase activity","type":"related"},{"name":"protein N6-(octanoyl)lysine:sulfur sulfurtransferase activity","type":"related"}],"termid":"GO:0016992","terms_by_termid":{"GO:0016992":null}}


id: RO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has developmental potential involving y iff x is capable of a developmental process with output y. y may be the successor of x, or may be a different structure in the vicinity (as for example in the case of developmental induction).","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_related_to","termid":"RO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_developmental_potential_involving","termid":"RO:0002384"}


id: PBO:0108918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component like 4 (pseudogene)","termid":"PBO:0108918"}


id: GO:0003243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic growth in which the left ventricle grows expanding its external boundary.","definition_xrefs":["GOC:mtg_heart","PMID:14709543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"part_of","term_name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circumferential growth involved in left ventricle morphogenesis","termid":"GO:0003243"}


id: PBO:0073714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1 pseudogene 1","termid":"PBO:0073714"}


id: GO:0006746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the reduced form of flavin adenine dinucleotide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"FADH2 metabolic process","synonyms":[{"name":"FADH2 metabolism","type":"exact"},{"name":"reduced flavin adenine dinucleotide metabolic process","type":"exact"}],"termid":"GO:0006746"}


id: GO:0061584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of orexin from a cell or a tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"orexin secretion","synonyms":[{"name":"hypocretin secretion","type":"exact"}],"termid":"GO:0061584"}


id: GO:0034775
data:
  {"annotated_genes":["SJAG_03497","SJAG_05213","SJAG_03577","SJAG_01344","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[115122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[120224,97955,98944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"}]},"cv_name":"biological_process","definition":"A process in which glutathione is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione transport","termid":"GO:0034635"},{"relation_name":"is_a","term_name":"tripeptide transmembrane transport","termid":"GO:0035443"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"glutathione transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione membrane transport","type":"exact"},{"name":"transmembrane glutathione transport","type":"exact"}],"termid":"GO:0034775","terms_by_termid":{"GO:0071996":null,"GO:0098709":null,"GO:0160007":null}}


id: MONDO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"mechanical entropion","secondary_identifiers":["ICD9:374.02","UMLS:C0155189","DOID:13112","SCTID:38683003","MEDGEN:509838"],"termid":"MONDO:0001636","xrefs":{"Monarch":{"xref_id":"0001636"}}}


id: GO:0075016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a swollen, flattened portion of a symbiont filament is formed on or near its host organism, to adhere to and for the purpose of penetrating the host surface.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appressorium formation","synonyms":[{"name":"appressorium formation for entry into host, on or near host","type":"exact"},{"name":"appressorium formation on or near host","type":"related"},{"name":"formation of an appressorium by symbiont on or near host","type":"exact"}],"termid":"GO:0075016"}


id: MONDO:0011880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"candidiasis, familial, 3","secondary_identifiers":["GARD:15418","MESH:C564361","UMLS:C1843306","MEDGEN:335927","OMIM:607644"],"synonyms":[{"name":"CANDF3","type":"exact"},{"name":"Fcnc","type":"related"},{"name":"candidiasis, familial chronic nail, with Icam1 deficiency","type":"related"},{"name":"candidiasis, familial, 3","type":"exact"}],"termid":"MONDO:0011880","xrefs":{"Monarch":{"xref_id":"0011880"}}}


id: PBO:0024822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf3 (predicted)","termid":"PBO:0024822"}


id: PBO:0047718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 9, pseudogene","termid":"PBO:0047718"}


id: PBO:0078250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 26 (pseudogene)","termid":"PBO:0078250"}


id: MONDO:0015709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency syndrome with autoimmunity (obsolete MONDO:0015709)","secondary_identifiers":["icd11.foundation:1902856995","Orphanet:169355"],"termid":"MONDO:0015709","xrefs":{"Monarch":{"xref_id":"0015709"}}}


id: GO:0061936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a sperm, with the plasma membrane of the oocyte as part of the process of double fertilization forming a zygote and endosperm.","definition_xrefs":["PMID:21123745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"plasma membrane fusion","termid":"GO:0045026"},{"relation_name":"part_of","term_name":"double fertilization forming a zygote and endosperm","termid":"GO:0009567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm","termid":"GO:0061936"}


id: GO:0060879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of the semicircular canal by sealing the edges of the pouch that forms during the process of semicircular canal formation.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube closure","termid":"GO:0060606"},{"relation_name":"part_of","term_name":"semicircular canal formation","termid":"GO:0060876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal fusion","termid":"GO:0060879"}


id: GO:0030134
data:
  {"annotated_genes":["SJAG_04592","SJAG_02120","SJAG_00072","SJAG_03558","SJAG_01633","SJAG_04196","SJAG_03270","SJAG_04023","SJAG_02264","SJAG_00767","SJAG_00785","SJAG_03153","SJAG_04740","SJAG_05013","SJAG_04112","SJAG_00557","SJAG_05344","SJAG_02349","SJAG_04598","SJAG_03933","SJAG_01642","SJAG_02839","SJAG_04002","SJAG_03907","SJAG_04402","SJAG_05345","SJAG_00906","SJAG_00284","SJAG_01991","SJAG_04513","SJAG_00357","SJAG_02539","SJAG_01939"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71613,72784,74042,76277,76440,77443,77504,78733,78769,80617,81046,93382,95003,97493,105188,112717,118519,120831],"is_not":false,"summary":null,"term":"GO:0030134"},{"annotations":[73229,77424,78890,76976,78314,80262,97392,74782,73107,76618],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[102989,75670,68769,72206,77899],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"A vesicle with a coat formed of the COPII coat complex proteins. The COPII coat complex is formed by the Sec23p/Sec24p and the Sec13p/Sec31p heterodimers. COPII-associated vesicles transport proteins from the rough endoplasmic reticulum to the Golgi apparatus (anterograde transport).","definition_xrefs":["PMID:8004676","PMID:11252894","PMID:17499046","PMID:22160157","Wikipedia:COPII"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00357":null,"SJAG_00557":null,"SJAG_00767":null,"SJAG_00785":null,"SJAG_00906":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01939":null,"SJAG_01991":null,"SJAG_02120":null,"SJAG_02264":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_02839":null,"SJAG_03153":null,"SJAG_03270":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_03933":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04112":null,"SJAG_04196":null,"SJAG_04402":null,"SJAG_04513":null,"SJAG_04592":null,"SJAG_04598":null,"SJAG_04740":null,"SJAG_05013":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"COPII-coated ER to Golgi transport vesicle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030138","GO:0140045"],"synonyms":[{"name":"COPII vesicle","type":"related"},{"name":"COPII-associated ER to Golgi transport vesicle","type":"exact"},{"name":"COPII-associated vesicle","type":"exact"},{"name":"COPII-coated vesicle","type":"exact"},{"name":"ER to Golgi constitutive secretory pathway transport vesicle","type":"related"},{"name":"ER to Golgi transport vesicle","type":"related"},{"name":"ER-Golgi transport vesicle","type":"related"},{"name":"endoplasmic reticulum to Golgi transport vesicle","type":"related"},{"name":"endoplasmic reticulum-Golgi transport vesicle","type":"related"}],"termid":"GO:0030134","terms_by_termid":{"GO:0012507":null,"GO:0030127":null,"GO:0030134":null}}


id: PBO:0014302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex GTPase sububit Gem1 (predicted)","termid":"PBO:0014302"}


id: FYPO:0005491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of protein localization in vacuole occurs to a lower extent than normal, and some of the protein is secreted, i.e. some of a protein that normally resides in the vacuole is instead secreted.","definition_xrefs":["PMID:22484924","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased maintenance of protein localization in vacuole, with protein secreted","synonyms":[{"name":"decreased maintenance of protein localisation in vacuole, with protein secreted","type":"exact"},{"name":"decreased maintenance of protein localization in vacuole, with protein secreted, during mitotic cell cycle","type":"related"},{"name":"decreased maintenance of protein localization in vacuole, with protein secreted, during vegetative growth","type":"exact"},{"name":"protein partially mislocalized from vacuole to extracellular region","type":"related"},{"name":"reduced maintenance of protein localization in vacuole, with protein secreted","type":"exact"}],"termid":"FYPO:0005491"}


id: PBO:0029163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation","termid":"PBO:0029163"}


id: GO:0032180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ubiquinone, beginning with the conversion of tyrosine to 4-hydroxybenzoate.","definition_xrefs":["GOC:mah","PMID:11583838"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone biosynthetic process from tyrosine (obsolete GO:0032180)","termid":"GO:0032180"}


id: FYPO:0002961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the fungal-type cell wall is delaminated, i.e. one or more of its layers peels off, when the cell is in G0 phase.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delaminated cell wall","termid":"FYPO:0002948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"delaminated cell wall during G0","synonyms":[{"name":"delaminate cell wall during G0","type":"exact"},{"name":"delaminated cell wall during G0","type":"related"},{"name":"delaminated cell wall during cell quiescence","type":"exact"},{"name":"delaminated cell wall during quiescence","type":"exact"}],"termid":"FYPO:0002961"}


id: PBO:0055628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3067","termid":"PBO:0055628"}


id: PBO:0086917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc-cluster transcription factor; involved in utilization of iron-transporting siderophore pulcherrimin","termid":"PBO:0086917"}


id: MONDO:0009135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia type 1","termid":"MONDO:0020337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"anemia, congenital dyserythropoietic, type 1a","secondary_identifiers":["MEDGEN:1807106","DOID:0111398","UMLS:C5574667","OMIM:224120"],"synonyms":[{"name":"CDA Ia","type":"related"},{"name":"CDAN1A","type":"related"},{"name":"anemia, congenital dyserythropoietic, type 1","type":"related"},{"name":"anemia, congenital dyserythropoietic, type 1a","type":"exact"},{"name":"anemia, congenital dyserythropoietic, type Ia","type":"exact"},{"name":"dyserythropoietic Anemia, congenital, type Ia","type":"related"}],"termid":"MONDO:0009135","xrefs":{"Monarch":{"xref_id":"0009135"}}}


id: GO:0140479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A biosynthetic process that results in the formation of ergothioneine from histidine via a set of steps including the hercynylcysteine sulfoxide synthase reaction, which converts N-alpha,N-alpha,N-alpha-trimethyl-L-histidine directly to hercynylcysteine sulfoxide.","definition_xrefs":["PMID:22209968","PMID:24828577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergothioneine biosynthetic process","termid":"GO:0052699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"ergothioneine biosynthesis from histidine via hercynylcysteine sulfoxide synthase","termid":"GO:0140479"}


id: PBO:0012536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_maturation_of","termid":"PBO:0012536"}


id: PBO:0090769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex subunit Hip4","termid":"PBO:0090769"}


id: GO:0001731
data:
  {"annotated_genes":["SJAG_05003","SJAG_00912","SJAG_00466","SJAG_01487","SJAG_04093","SJAG_02263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73154,75236,79809,80259,97969,120079],"is_not":false,"summary":null,"term":"GO:0001731"}]},"cv_name":"biological_process","definition":"The joining of the small ribosomal subunit, ternary complex, and mRNA.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00466":null,"SJAG_00912":null,"SJAG_01487":null,"SJAG_02263":null,"SJAG_04093":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0010467","GO:0008150","GO:0044085","GO:0002181"],"is_obsolete":false,"name":"formation of translation preinitiation complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"formation of translation pre-initiation complex","type":"exact"},{"name":"translation preinitiation complex assembly","type":"exact"}],"termid":"GO:0001731","terms_by_termid":{"GO:0001731":null}}


id: GO:0042880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-glucuronate, the D-enantiomer of glucuronate, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","GOC:mah","ISBN:0198506732","GOC:mtg_transport","GOC:jsg","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate transmembrane transporter activity","termid":"GO:0015135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"D-glucuronate transmembrane transporter activity","termid":"GO:0042880"}


id: PBO:0068439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 11, pseudogene","termid":"PBO:0068439"}


id: GO:0043481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of the pigment anthocyanin in a particular location in a tissue, occurring in response to a UV light stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment accumulation in tissues in response to UV light","termid":"GO:0043479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anthocyanin accumulation in tissues in response to UV light","termid":"GO:0043481"}


id: GO:1903518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single strand break repair.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:rl","GOC:TermGenie","PMID:17395247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"positively_regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"positive regulation of single strand break repair","synonyms":[{"name":"activation of single strand break repair","type":"narrow"},{"name":"up regulation of single strand break repair","type":"exact"},{"name":"up-regulation of single strand break repair","type":"exact"},{"name":"upregulation of single strand break repair","type":"exact"}],"termid":"GO:1903518"}


id: FYPO:0002984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methyl methanesulfonate is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal RNA accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"normal RNA level during cellular response to MMS","type":"exact"},{"name":"normal RNA level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to methyl methanesulphonate","type":"exact"},{"name":"normal mRNA level during cellular response to methyl methanesulfonate","type":"narrow"},{"name":"normal transcript level during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002984"}


id: PBO:0004405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase, e2 component of oxoglutarate dehydrogenase complex Kdg2 (predicted)","termid":"PBO:0004405"}


id: PBO:0074052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 32","termid":"PBO:0074052"}


id: PBO:0059339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS9 antisense RNA 1","termid":"PBO:0059339"}


id: PBO:0090938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 4 Pre1","termid":"PBO:0090938"}


id: MONDO:0024813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm originating from the apical lung. Most superior sulcus neoplasms are bronchogenic carcinomas. This tumor may be associated with Pancoast syndrome. It is also known as Pancoast tumor.","definition_xrefs":["NCIT:C27710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary sulcus neoplasm","secondary_identifiers":["MEDGEN:277550","UMLS:C1335574"],"synonyms":[{"name":"pulmonary sulcus neoplasm","type":"exact"},{"name":"pulmonary sulcus tumor","type":"exact"},{"name":"pulmonary sulcus tumour","type":"exact"}],"termid":"MONDO:0024813","xrefs":{"Monarch":{"xref_id":"0024813"}}}


id: PBO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex subunit Tpr1","termid":"PBO:0002571"}


id: PR:Q9C0X7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB8E5.08 gene.","definition_xrefs":["UniProtKB:Q9C0X7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein PB8E5.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.08","synonyms":[{"name":"Spom972h-SPAPB8E5.08","type":"exact"}],"termid":"PR:Q9C0X7"}


id: FYECO:0000030
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ions","termid":"FYECO:0000030"}


id: GO:0032352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving any hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"positively_regulates","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hormone metabolic process","synonyms":[{"name":"activation of hormone metabolic process","type":"narrow"},{"name":"positive regulation of hormone metabolism","type":"exact"},{"name":"stimulation of hormone metabolic process","type":"narrow"},{"name":"up regulation of hormone metabolic process","type":"exact"},{"name":"up-regulation of hormone metabolic process","type":"exact"},{"name":"upregulation of hormone metabolic process","type":"exact"}],"termid":"GO:0032352"}


id: FYPO:0007868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a substance that inhibits actin polymerization. Cells stop growing (and may die) at a concentration of an actin polymerization inhibitor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to actin polymerization inhibitor","synonyms":[{"name":"sensitive to actin cytoskeleton damaging agent","type":"related"},{"name":"sensitive to actin polymerisation inhibitor","type":"exact"}],"termid":"FYPO:0007868"}


id: GO:0120543
data:
  {"annotated_genes":["SJAG_01677","SJAG_02294","SJAG_01644","SJAG_00786","SJAG_03730","SJAG_01613","SJAG_04081","SJAG_02287","SJAG_04183","SJAG_01489","SJAG_01131","SJAG_00887","SJAG_02686","SJAG_04974","SJAG_16455","SJAG_03036","SJAG_02242","SJAG_04001","SJAG_05025","SJAG_02199","SJAG_04745","SJAG_00712","SJAG_03011","SJAG_00871","SJAG_00798","SJAG_02382","SJAG_00995","SJAG_03567","SJAG_02690","SJAG_05173","SJAG_00597","SJAG_04064","SJAG_00857","SJAG_03157","SJAG_03780","SJAG_04480","SJAG_01152","SJAG_03703","SJAG_00616","SJAG_04816","SJAG_00851","SJAG_02991","SJAG_01499","SJAG_00930","SJAG_04118","SJAG_02835","SJAG_04566","SJAG_05372","SJAG_02348","SJAG_01546","SJAG_04210","SJAG_01953","SJAG_01354","SJAG_02431","SJAG_03077","SJAG_03886","SJAG_03897","SJAG_01182","SJAG_05193","SJAG_03533","SJAG_04589","SJAG_03898","SJAG_01643","SJAG_05353","SJAG_04477","SJAG_06597","SJAG_02061","SJAG_01315","SJAG_02558","SJAG_00884","SJAG_04230","SJAG_01221","SJAG_00938","SJAG_04355","SJAG_00766","SJAG_01530","SJAG_04650","SJAG_01544","SJAG_02822","SJAG_03495","SJAG_04372","SJAG_00773","SJAG_02200","SJAG_05105","SJAG_02295","SJAG_02286","SJAG_03682","SJAG_03206","SJAG_03923","SJAG_03479","SJAG_00986","SJAG_05276","SJAG_06642","SJAG_01762","SJAG_02879","SJAG_00583","SJAG_03193","SJAG_00042","SJAG_04772","SJAG_05295","SJAG_02336","SJAG_03832","SJAG_01297","SJAG_04669","SJAG_00332","SJAG_00898"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116286,72687,76538,81260,72120,76511,112928,114940,114941,114942,75179,79901,79453,79847,114938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043138"},{"annotations":[109195,117282,108379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033679"},{"annotations":[75916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034458"},{"annotations":[78766,94036,59128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043139"},{"annotations":[114514,101791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033678"},{"annotations":[101792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032574"},{"annotations":[73750,91020,78081,74703,78625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003678"},{"annotations":[74527,72185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003917"},{"annotations":[70084,73522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003918"},{"annotations":[117919,114518,115382,105104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990814"},{"annotations":[91648,120210,80696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036121"},{"annotations":[80694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061749"},{"annotations":[79904,72690,81262,79849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009378"},{"annotations":[72026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004386"},{"annotations":[78447,71933,72870,81392,76139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000146"},{"annotations":[62052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003777"},{"annotations":[78245,75824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008568"},{"annotations":[96658,98671,59426,67402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008569"},{"annotations":[63024,77598,77725,79603,80642,105472,105673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008574"},{"annotations":[80253,79913,75480,81378,80992,78688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036402"},{"annotations":[64580,59042,60549,103331,82260,69040,77294,70949,80859,81541,97883,109752,73582,105055,118369,73734,57771,57197,101237,89610,58079,62590,66439,60923,78001,77308,80506,81007,117430,63073,109232,75914,78923,77189,102547,77227,73592,75854,105456,120705,62033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003724"},{"annotations":[109263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033592"},{"annotations":[111054,117286,71685,109198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990518"},{"annotations":[114523,75219,80386,64845,75181,76513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017116"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that alters the macromolecular conformation of a molecule.","definition_xrefs":["EC:5.6.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase 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conformation isomerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0120543","terms_by_termid":{"GO:0000146":null,"GO:0003678":null,"GO:0003724":null,"GO:0003777":null,"GO:0003917":null,"GO:0003918":null,"GO:0004386":null,"GO:0008568":null,"GO:0008569":null,"GO:0008574":null,"GO:0009378":null,"GO:0017116":null,"GO:0032574":null,"GO:0033592":null,"GO:0033678":null,"GO:0033679":null,"GO:0034458":null,"GO:0036121":null,"GO:0036402":null,"GO:0043138":null,"GO:0043139":null,"GO:0061749":null,"GO:1990518":null,"GO:1990814":null}}


id: GO:0047351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 GTP + H+ = P(1),P(4)-bis(5'-guanosyl) tetraphosphate + diphosphate + H+.","definition_xrefs":["RHEA:18153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"GTP guanylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00012","MetaCyc:2.7.7.45-RXN","EC:2.7.7.45"],"synonyms":[{"name":"GTP:GTP guanylyltransferase activity","type":"broad"},{"name":"guanosine-triphosphate guanylyltransferase activity","type":"exact"}],"termid":"GO:0047351"}


id: GO:1902055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neosartoricin biosynthetic process.","definition_xrefs":["PMID:23368997","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"is_a","term_name":"regulation of neosartoricin biosynthetic process","termid":"GO:1902053"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"neosartoricin biosynthetic process","termid":"GO:1902050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"positive regulation of neosartoricin biosynthetic process","synonyms":[{"name":"activation of neosartoricin anabolism","type":"exact"},{"name":"activation of neosartoricin biosynthesis","type":"exact"},{"name":"activation of neosartoricin biosynthetic process","type":"narrow"},{"name":"activation of neosartoricin formation","type":"exact"},{"name":"activation of neosartoricin synthesis","type":"exact"},{"name":"positive regulation of neosartoricin anabolism","type":"exact"},{"name":"positive regulation of neosartoricin biosynthesis","type":"exact"},{"name":"positive regulation of neosartoricin formation","type":"exact"},{"name":"positive regulation of neosartoricin synthesis","type":"exact"},{"name":"up regulation of neosartoricin anabolism","type":"exact"},{"name":"up regulation of neosartoricin biosynthesis","type":"exact"},{"name":"up regulation of neosartoricin biosynthetic process","type":"exact"},{"name":"up regulation of neosartoricin formation","type":"exact"},{"name":"up regulation of neosartoricin synthesis","type":"exact"},{"name":"up-regulation of neosartoricin anabolism","type":"exact"},{"name":"up-regulation of neosartoricin biosynthesis","type":"exact"},{"name":"up-regulation of neosartoricin biosynthetic process","type":"exact"},{"name":"up-regulation of neosartoricin formation","type":"exact"},{"name":"up-regulation of neosartoricin synthesis","type":"exact"},{"name":"upregulation of neosartoricin anabolism","type":"exact"},{"name":"upregulation of neosartoricin biosynthesis","type":"exact"},{"name":"upregulation of neosartoricin biosynthetic process","type":"exact"},{"name":"upregulation of neosartoricin formation","type":"exact"},{"name":"upregulation of neosartoricin synthesis","type":"exact"}],"termid":"GO:1902055"}


id: MONDO:0032875
data:
  {"annotated_genes":["SJAG_02513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88625],"is_not":false,"summary":null,"term":"MONDO:0032875"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02513":null},"genotype_count":0,"is_obsolete":false,"name":"short stature and microcephaly with genital anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684791","UMLS:C5231467","OMIM:618702"],"synonyms":[{"name":"SHORT STATURE AND MICROCEPHALY WITH GENITAL ANOMALIES","type":"related"},{"name":"SSMGA","type":"related"}],"termid":"MONDO:0032875","terms_by_termid":{"MONDO:0032875":null},"xrefs":{"Monarch":{"xref_id":"0032875"}}}


id: GO:0009314
data:
  {"annotated_genes":["SJAG_00863","SJAG_02818","SJAG_01648","SJAG_04877","SJAG_01262","SJAG_00208","SJAG_04190","SJAG_05242","SJAG_02200","SJAG_03898","SJAG_02182","SJAG_02828","SJAG_01010","SJAG_00272","SJAG_02199","SJAG_00814","SJAG_02334","SJAG_00729","SJAG_05197","SJAG_02860","SJAG_04791","SJAG_04150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79770],"is_not":false,"summary":null,"term":"GO:0009314"},{"annotations":[67596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[121478,121479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[97119,78670,104748,111074],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[95523,70514,114820,71795,97900,67870,99015,60750,66916,89842,69015,77456,107888,66023,106155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.","definition_xrefs":["Wikipedia:Electromagnetic_radiation","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to radiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:23873862":null},"synonyms":[{"name":"response to electromagnetic radiation stimulus","type":"exact"},{"name":"response to radiation stimulus","type":"exact"}],"termid":"GO:0009314","terms_by_termid":{"GO:0009314":null,"GO:0009785":null,"GO:0070914":null,"GO:0071483":null,"GO:1904161":null}}


id: PBO:0041915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellin 3 precursor","termid":"PBO:0041915"}


id: MONDO:0045072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal secretion of hormones in conjunction with neoplastic growth occurring anywhere in the body.","definition_xrefs":["NCIT:C4065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectopic hormone secretion syndrome associated with neoplasia","secondary_identifiers":["UMLS:C0851689","MEDGEN:208863"],"synonyms":[{"name":"ectopic hormone secretion syndrome associated with neoplasia","type":"exact"},{"name":"neoplasm associated ectopic hormone secretion syndrome","type":"exact"}],"termid":"MONDO:0045072","xrefs":{"Monarch":{"xref_id":"0045072"}}}


id: GO:1901321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heart induction.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart induction","termid":"GO:0090381"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"positively_regulates","term_name":"heart induction","termid":"GO:0003129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart induction","synonyms":[{"name":"activation of heart induction","type":"narrow"},{"name":"up regulation of heart induction","type":"exact"},{"name":"up-regulation of heart induction","type":"exact"},{"name":"upregulation of heart induction","type":"exact"}],"termid":"GO:1901321"}


id: PBO:0056337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 20","termid":"PBO:0056337"}


id: PBO:0038747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 4 pseudogene 2","termid":"PBO:0038747"}


id: PBO:0068995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 239, pseudogene","termid":"PBO:0068995"}


id: MONDO:0006394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually polypoid neoplasm that arises from the glandular epithelium of the rectal mucosa. It is characterized by a tubular architectural pattern. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C96477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum adenoma","termid":"MONDO:0000530"},{"relation_name":"is_a","term_name":"tubular adenoma","termid":"MONDO:0024660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal tubular adenoma","secondary_identifiers":["UMLS:C3272804","MEDGEN:474437","EFO:1000504"],"synonyms":[{"name":"rectal tubular adenoma","type":"exact"}],"termid":"MONDO:0006394","xrefs":{"Monarch":{"xref_id":"0006394"}}}


id: PBO:0053739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 964","termid":"PBO:0053739"}


id: PBO:0039093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-hook containing transcription factor 1 pseudogene 1","termid":"PBO:0039093"}


id: PBO:0028082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_total_nuclear_polyadenylated_mRNA_level_during_vegetative_growth","termid":"PBO:0028082"}


id: PBO:0005031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulphate transporter (predicted)","termid":"PBO:0005031"}


id: PBO:0038604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase 1","termid":"PBO:0038604"}


id: PBO:0011517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase, Arb family ABCF1-like (predicted)","termid":"PBO:0011517"}


id: GO:2000995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellodextrin metabolic process","termid":"GO:2000925"},{"relation_name":"is_a","term_name":"negative regulation of cell wall polysaccharide catabolic process","termid":"GO:2000967"},{"relation_name":"is_a","term_name":"regulation of mannan catabolic process","termid":"GO:2000994"},{"relation_name":"negatively_regulates","term_name":"mannan catabolic process","termid":"GO:0046355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mannan catabolic process","synonyms":[{"name":"negative regulation of mannan breakdown","type":"exact"},{"name":"negative regulation of mannan catabolism","type":"exact"},{"name":"negative regulation of mannan degradation","type":"exact"}],"termid":"GO:2000995"}


id: PBO:0108701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp1","termid":"PBO:0108701"}


id: PBO:0061513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 3","termid":"PBO:0061513"}


id: PR:Q9Y7R7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC306.07c gene.","definition_xrefs":["UniProtKB:Q9Y7R7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein C306.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.07c","synonyms":[{"name":"Spom972h-SPCC306.07c","type":"exact"},{"name":"U3 snoRNP-associated protein C306.07c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7R7"}


id: PBO:0061923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily F member 12, pseudogene","termid":"PBO:0061923"}


id: GO:0072286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric connecting tubule over time, from its formation to the mature structure. The metanephric connecting tubule is a tubular segment of the metanephric nephron; it connects the distal convoluted tubule to the collecting duct in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connecting tubule development","termid":"GO:0072027"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric connecting tubule development","synonyms":[{"name":"metanephric connecting duct development","type":"exact"}],"termid":"GO:0072286"}


id: PBO:0001014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auxin family transmembrane transporter (predicted)","termid":"PBO:0001014"}


id: GO:2000339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemokine (C-X-C motif) ligand 1 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 1 production","termid":"GO:2000338"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-X-C motif) ligand 1 production","termid":"GO:0072566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemokine (C-X-C motif) ligand 1 production","synonyms":[{"name":"negative regulation of CXCL1 production","type":"exact"},{"name":"negative regulation of KC production","type":"exact"},{"name":"negative regulation of SCYB1 production","type":"exact"},{"name":"negative regulation of keratinocyte derived chemokine production","type":"exact"}],"termid":"GO:2000339"}


id: MONDO:1010949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-hodgkin lymphoma that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline lymphoma","termid":"MONDO:0700176"},{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, non-human animal","termid":"MONDO:1010214"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-hodgkin lymphoma, domestic cat","secondary_identifiers":["OMIA:001708-9685"],"termid":"MONDO:1010949","xrefs":{"Monarch":{"xref_id":"1010949"}}}


id: PBO:0028593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_heat","termid":"PBO:0028593"}


id: PBO:0117402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM11 antisense RNA 1","termid":"PBO:0117402"}


id: PBO:0108911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP50 pseudogene 4","termid":"PBO:0108911"}


id: GO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process, which occurs as a dividing cell ages, leading to expression of genes that are typically not expressed due to silencing by regulatory proteins.","definition_xrefs":["PMID:12044934","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chromatin silencing involved in replicative cell aging (obsolete GO:0001308)","synonyms":[{"name":"loss of chromatin silencing during replicative cell ageing","type":"related"},{"name":"loss of chromatin silencing involved in replicative cell aging","type":"exact"}],"termid":"GO:0001308"}


id: PBO:0046014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 1","termid":"PBO:0046014"}


id: MONDO:0013168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the RBM20 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1DD","secondary_identifiers":["MEDGEN:416441","MESH:C567725","OMIM:613172","GARD:15627","UMLS:C2750995","DOID:0110447"],"synonyms":[{"name":"CMD1DD","type":"exact"},{"name":"RBM20 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1DD","type":"related"},{"name":"cardiomyopathy, dilated, type 1Dd","type":"exact"},{"name":"dilated cardiomyopathy type 1DD","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in RBM20","type":"exact"}],"termid":"MONDO:0013168","xrefs":{"Monarch":{"xref_id":"0013168"}}}


id: PBO:0047466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 6","termid":"PBO:0047466"}


id: GO:0005276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a vesicle membrane to the other according to the reaction: H+(in) + amino acid(out) = H+(out) + amino acid(in).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular amino acid:proton antiporter activity (obsolete GO:0005276)","synonyms":[{"name":"hydrogen:vesicular amine antiporter activity","type":"exact"},{"name":"vesicular hydrogen:amino acid antiporter activity","type":"exact"}],"termid":"GO:0005276"}


id: PBO:0072118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 7","termid":"PBO:0072118"}


id: PBO:0077989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformer 2 alpha homolog","termid":"PBO:0077989"}


id: MONDO:0054752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synostoses syndrome","termid":"MONDO:0017923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple synostoses syndrome 4","secondary_identifiers":["UMLS:C4693531","DOID:0081320","OMIM:617898","MEDGEN:1638842"],"synonyms":[{"name":"SYNS4","type":"related"},{"name":"multiple synostoses syndrome 4","type":"exact"}],"termid":"MONDO:0054752","xrefs":{"Monarch":{"xref_id":"0054752"}}}


id: PBO:0053034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARGE intronic transcript 1","termid":"PBO:0053034"}


id: PBO:0059990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 10","termid":"PBO:0059990"}


id: MONDO:0017317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phakomatosis pigmentokeratotica (PPK) is a very rare epidermal nevus disorder characterized by the association of speckled lentiginous nevi with epidermal sebaceous nevi, and extracutaneous anomalies.","definition_xrefs":["Orphanet:2874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system benign neoplasm","termid":"MONDO:0000648"},{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"phakomatosis pigmentokeratotica","secondary_identifiers":["MEDGEN:419860","icd11.foundation:960559196","GARD:4311","SCTID:723455009","MESH:C537893","UMLS:C2931658"],"synonyms":[{"name":"Phacomatosis pigmentokeratotica","type":"related"},{"name":"organoid nevus with sebaceous differentiation, a speckled-lentiginous nevus, and other associated anomalies","type":"related"}],"termid":"MONDO:0017317","xrefs":{"Monarch":{"xref_id":"0017317"}}}


id: PBO:0085448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of the Gcn2p kinase activity; important for disaggregation of ordered and disordered protein aggregates; forms a complex with Gcn1p; proposed to stimulate Gcn2p activation by an uncharged tRNA","termid":"PBO:0085448"}


id: GO:0033940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-xylosyl links in some glucuronoarabinoxylans.","definition_xrefs":["EC:3.2.1.136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucuronoarabinoxylan endo-1,4-beta-xylanase activity","secondary_identifiers":["MetaCyc:3.2.1.136-RXN"],"synonyms":[{"name":"endoarabinoxylanase activity","type":"related"},{"name":"feraxan endoxylanase activity","type":"related"},{"name":"feraxanase activity","type":"related"},{"name":"glucuronoarabinoxylan 1,4-beta-D-xylanohydrolase activity","type":"related"},{"name":"glucuronoxylan xylanohydrolase activity","type":"related"},{"name":"glucuronoxylan xylohydrolase activity","type":"related"},{"name":"glucuronoxylanase activity","type":"related"}],"termid":"GO:0033940"}


id: PBO:0072526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 55","termid":"PBO:0072526"}


id: MONDO:0017821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete functioning pituitary adenoma (obsolete MONDO:0017821)","termid":"MONDO:0017821","xrefs":{"Monarch":{"xref_id":"0017821"}}}


id: GO:0010422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of brassinosteroids.","definition_xrefs":["PMID:16857903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"regulates","term_name":"brassinosteroid biosynthetic process","termid":"GO:0016132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of brassinosteroid biosynthetic process","termid":"GO:0010422"}


id: PBO:0085395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane P2-type H+-ATPase; pumps protons out of cell; major regulator of cytoplasmic pH and plasma membrane potential; long-lived hexameric protein asymmetrically distributed at plasma membrane between mother cells and buds; accumulates at high levels in mother cells during aging, buds emerge with very low levels of Pma1p, newborn cells have low levels of Pma1p; Hsp30p plays a role in Pma1p regulation; interactions with Std1p appear to propagate [GAR+]","termid":"PBO:0085395"}


id: PBO:0056849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal glutathione S-transferase 1","termid":"PBO:0056849"}


id: MONDO:0011111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete horns in sheep (obsolete MONDO:0011111)","secondary_identifiers":["OMIM:601563"],"synonyms":[{"name":"Ho","type":"related"},{"name":"horns in sheep","type":"exact"}],"termid":"MONDO:0011111","xrefs":{"Monarch":{"xref_id":"0011111"}}}


id: MONDO:0022823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital contractures","secondary_identifiers":["UMLS:C0332878","MEDGEN:83066"],"termid":"MONDO:0022823","xrefs":{"Monarch":{"xref_id":"0022823"}}}


id: GO:1904458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of substance P secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11278900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"substance P secretion","termid":"GO:1990772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of substance P secretion","termid":"GO:1904458"}


id: MONDO:0003331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma that arises from the ovary and is characterized by the presence of tissues derived exclusively from one embryonic germ cell layer.","definition_xrefs":["NCIT:C7286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian teratoma","termid":"MONDO:0005602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian monodermal teratoma","secondary_identifiers":["DOID:5207","MEDGEN:266265","UMLS:C1302569"],"synonyms":[{"name":"monodermal teratoma","type":"exact"},{"name":"monodermal teratoma (morphologic abnormality)","type":"exact"},{"name":"ovarian monodermal teratoma","type":"exact"}],"termid":"MONDO:0003331","xrefs":{"Monarch":{"xref_id":"0003331"}}}


id: PBO:0027182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere_outer_repeat","termid":"PBO:0027182"}


id: PBO:0067000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 4, pseudogene","termid":"PBO:0067000"}


id: MOD:00196
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and a glycine residue to form L-cysteine 5-imidazolinone glycine.","definition_xrefs":["PubMed:1537807","RESID:AA0188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1R)-1-amino-2-sulfanylethyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[1-amino-2-sulfanylethyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Cys-Gly)","type":"exact"},{"name":"L-cysteine 5-imidazolinone glycine","type":"exact"},{"name":"XLNK-1Cys-NGly(Imidazole)","type":"exact"},{"name":"cysteinyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00196"}


id: PBO:0079198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 1","termid":"PBO:0079198"}


id: PBO:0059234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L4","termid":"PBO:0059234"}


id: PBO:0055009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2424","termid":"PBO:0055009"}


id: GO:0003200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of the heart septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"},{"relation_name":"part_of","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition involved in heart chamber septation","termid":"GO:0003200"}


id: PBO:0056549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCHR2 antisense RNA 1","termid":"PBO:0056549"}


id: FYPO:0005312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which establishment of mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Establishment of mitotic sister chromatid cohesion is the process in which the sister chromatids of a replicated chromosome become joined along the entire length of the chromosome during S phase of the mitotic cell cycle.","definition_xrefs":["GO:0034087","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal establishment of mitotic sister chromatid cohesion","synonyms":[{"name":"normal establishment of mitotic chromosome cohesion","type":"exact"},{"name":"normal establishment of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal establishment of sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005312"}


id: PBO:0112752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 2, Agm2","termid":"PBO:0112752"}


id: GO:2000041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in axis elongation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in axis elongation (obsolete GO:2000041)","termid":"GO:2000041"}


id: GO:1990855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of myo-inositol from outside of a cell into the intracellular region of a cell across the plasma membrane.","definition_xrefs":["PMID:9560432"],"gene_count":0,"genotype_count":0,"name":"obsolete myo-inositol import across plasma membrane (obsolete GO:1990855)","termid":"GO:1990855"}


id: FYPO:0003959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of diacylglycerol O-acyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal diacylglycerol O-acyltransferase activity","termid":"FYPO:0003958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased diacylglycerol O-acyltransferase activity","synonyms":[{"name":"decreased DGAT activity","type":"exact"},{"name":"decreased diacylglycerol acyltransferase activity","type":"broad"},{"name":"reduced diacylglycerol O-acyltransferase activity","type":"exact"}],"termid":"FYPO:0003959"}


id: PBO:0046490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroferrone","termid":"PBO:0046490"}


id: GO:0070412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor-regulated SMAD signaling protein.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:19114992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD binding","termid":"GO:0046332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"R-SMAD binding","synonyms":[{"name":"pathway restricted SMAD binding","type":"exact"},{"name":"pathway-restricted SMAD binding","type":"exact"},{"name":"receptor regulated SMAD binding","type":"exact"},{"name":"receptor-regulated SMAD binding","type":"exact"}],"termid":"GO:0070412"}


id: MONDO:0010446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked cone dysfunction syndrome with myopia is characterized by moderate to high myopia associated with astigmatism and deuteranopia. Less than 10 families have been described so far. Transmission is X-linked recessive and the locus has been mapped to Xq28.","definition_xrefs":["Orphanet:90001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked cone dysfunction syndrome with myopia","secondary_identifiers":["MESH:C564092","OMIM:300843","SCTID:718718009","UMLS:C3159311","GARD:16782","icd11.foundation:290885874","MEDGEN:463611"],"synonyms":[{"name":"BORNHOLM eye disease","type":"related"},{"name":"Bornholm eye disease","type":"exact"},{"name":"Bornholm eye disease, X-linked recessive","type":"exact"},{"name":"bed","type":"related"},{"name":"myopia, high, with nonprogressive cone dysfunction","type":"related"}],"termid":"MONDO:0010446","xrefs":{"Monarch":{"xref_id":"0010446"}}}


id: MONDO:0011838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of retinal dystrophy, seen mostly in Northern Sweden, presenting in early childhood with night blindness and progressive maculopathy with a decrease in visual acuity, eventually leading to blindness by adulthood. Retinal degeneration, without obvious bone spicule formation, accompanied by affected visual fields and the typical presence of retinitis punctata albescens in the posterior pole are also noted.","definition_xrefs":["Orphanet:85128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RLBP1-related retinopathy","termid":"MONDO:0100444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Bothnia retinal dystrophy","secondary_identifiers":["icd11.foundation:2110390212","SCTID:715647007","GARD:16734","MESH:C564392","OMIM:607475","ICD10CM:H35.5","UMLS:C1843816","MEDGEN:334499","DOID:0050683"],"synonyms":[{"name":"Bothnia retinal dystrophy","type":"exact"},{"name":"VC$sterbotten dystrophy","type":"exact"},{"name":"Vasterbotten dystrophy","type":"exact"},{"name":"Västerbotten dystrophy","type":"exact"}],"termid":"MONDO:0011838","xrefs":{"Monarch":{"xref_id":"0011838"}}}


id: GO:1901442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to furfural.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to furfural","termid":"GO:1901426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to furfural","termid":"GO:1901442"}


id: PBO:0014309
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae MET22","termid":"PBO:0014309"}


id: GO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-glutamate import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"positively_regulates","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-glutamate import across plasma membrane","secondary_identifiers":["GO:1900922"],"synonyms":[{"name":"activation of L-glutamate import","type":"narrow"},{"name":"activation of L-glutamate transport","type":"narrow"},{"name":"activation of L-glutamate uptake","type":"narrow"},{"name":"positive regulation of L-glutamate import","type":"broad"},{"name":"positive regulation of L-glutamate transport","type":"broad"},{"name":"positive regulation of L-glutamate uptake","type":"related"},{"name":"stimulation of L-glutamate transport","type":"narrow"},{"name":"up regulation of L-glutamate import","type":"exact"},{"name":"up regulation of L-glutamate transport","type":"broad"},{"name":"up regulation of L-glutamate uptake","type":"related"},{"name":"up-regulation of L-glutamate import","type":"exact"},{"name":"up-regulation of L-glutamate transport","type":"exact"},{"name":"up-regulation of L-glutamate uptake","type":"related"},{"name":"upregulation of L-glutamate import","type":"exact"},{"name":"upregulation of L-glutamate transport","type":"broad"},{"name":"upregulation of L-glutamate uptake","type":"related"}],"termid":"GO:0002038"}


id: MONDO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An unusual presentation of schistosomiasis characterized by a pruritic papular rash in the perigenital or periumbilical area due to an allergic reaction to schistosoma eggs deposited in the skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schistosomiasis","termid":"MONDO:0015254"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"parasitic skin disorder","termid":"MONDO:0024610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cercarial dermatitis","secondary_identifiers":["NCIT:C128349","DOID:11302","GARD:9747","icd11.foundation:648519873","SCTID:238534006","UMLS:C0546996","ICD10CM:B65.3","MEDGEN:108186","ICD9:120.3","ICD9:709.8"],"synonyms":[{"name":"Sea bather's eruption","type":"exact"},{"name":"cutaneous schistosomiasis","type":"exact"},{"name":"duck Itch","type":"exact"},{"name":"lake Itch","type":"exact"},{"name":"swimmer's itch","type":"related"}],"termid":"MONDO:0001260","xrefs":{"Monarch":{"xref_id":"0001260"}}}


id: PBO:0054935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2349","termid":"PBO:0054935"}


id: MONDO:0009863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive condition caused by mutation(s) in the PTS gene, encoding 6-pyruvoyl tetrahydrobiopterin synthase. It is characterized by BH4-defecient hyperphenylalanemia, depletion of dopamine and serotonin, and progressive cognitive and motor deficits.","definition_xrefs":["NCIT:C138171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphenylalaninemia due to tetrahydrobiopterin deficiency","termid":"MONDO:0016543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"BH4-deficient hyperphenylalaninemia A","secondary_identifiers":["SCTID:237914002","GARD:5682","UMLS:C0878676","MEDGEN:209234","MESH:C535325","DOID:0090106","OMIM:261640","Orphanet:13"],"synonyms":[{"name":"6-pyruvoyl tetrahydropterin synthase deficiency","type":"exact"},{"name":"6-pyruvoyl-tetrahydropterin synthase deficiency","type":"exact"},{"name":"BH4-deficient hyperphenylalaninemia A","type":"exact"},{"name":"Bh4-deficient hyperphenylalaninemia type A","type":"exact"},{"name":"HPABH4A","type":"exact"},{"name":"PTS deficiency","type":"exact"},{"name":"PTS deficiency hyperphenylalaninemia, BH4-deficient, due to partial PTS deficiency, included","type":"related"},{"name":"hyperphenylalanemia, BH4-deficient, A","type":"related"},{"name":"hyperphenylalaninemia due to 6-pyruvoyl-tetrahydropterin synthase deficiency","type":"related"},{"name":"hyperphenylalaninemia due to 6-pyruvoyltetrahydropterin synthase deficiency","type":"exact"},{"name":"hyperphenylalaninemia, BH4-deficient A","type":"exact"},{"name":"hyperphenylalaninemia, BH4-deficient, A","type":"related"},{"name":"hyperphenylalaninemia, BH4-deficient, type A","type":"related"},{"name":"hyperphenylalaninemia, Bh4-deficient, due to partial PTS deficiency","type":"related"},{"name":"hyperphenylalaninemia, Bh4-deficient, type a","type":"exact"},{"name":"hyperphenylalaninemia, tetrahydrobiopterin-deficient, due to PTS deficiency","type":"related"},{"name":"tetrahydobioperin-deficient hyperphenylalaninemia due to PTS deficiency","type":"exact"}],"termid":"MONDO:0009863","xrefs":{"Monarch":{"xref_id":"0009863"}}}


id: FYPO:0006958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2-oxoglutarate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular 2-oxoglutarate level","synonyms":[{"name":"increased 2-oxoglutarate accumulation","type":"related"},{"name":"increased cellular 2-oxoglutarate level during mitotic cell cycle","type":"related"},{"name":"increased cellular 2-oxoglutarate level during vegetative growth","type":"exact"}],"termid":"FYPO:0006958"}


id: PBO:0052564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 1","termid":"PBO:0052564"}


id: PBO:0085671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in outer spore wall assembly; likely involved directly in dityrosine layer assembly; putative GPI-anchored protein; overexpression causes growth arrest;; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; SHE10 has a paralog, OSW7/YFR039C, that arose from the whole genome duplication; paralogs are redundant for spore wall dityrosine assembly","termid":"PBO:0085671"}


id: PBO:0041260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 230","termid":"PBO:0041260"}


id: PR:P40377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11630:SF44","PRO:DNx","OMA:SCHPO02759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.04c","secondary_identifiers":["UniProtKB:P40377"],"synonyms":[{"name":"Spom972h-MCM2","type":"exact"},{"name":"cell division control protein 19 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"minichromosome maintenance protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40377"}


id: MONDO:0013719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cranioectodermal dysplasia","termid":"MONDO:0009032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005093","MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"cranioectodermal dysplasia 4","secondary_identifiers":["DOID:0080806","GARD:15796","OMIM:614378","UMLS:C3280616","MEDGEN:482246"],"synonyms":[{"name":"CED4","type":"related"},{"name":"cranioectodermal dysplasia 4","type":"exact"},{"name":"cranioectodermal dysplasia type 4","type":"exact"}],"termid":"MONDO:0013719","xrefs":{"Monarch":{"xref_id":"0013719"}}}


id: MONDO:1011168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondritis dissecans that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondritis dissecans, non-human animal","termid":"MONDO:1010298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondritis dissecans, horse","secondary_identifiers":["OMIA:000748-9796"],"termid":"MONDO:1011168","xrefs":{"Monarch":{"xref_id":"1011168"}}}


id: PBO:0051790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing G","termid":"PBO:0051790"}


id: PBO:0050561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine rich glycoprotein","termid":"PBO:0050561"}


id: PBO:0083148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF PCI8/YIL071C","termid":"PBO:0083148"}


id: GO:0090385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of a phagolysosome from a phagosome and a lysosome.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"phagolysosome assembly","termid":"GO:0001845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0044085","GO:0016192","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"phagosome-lysosome fusion","termid":"GO:0090385"}


id: PBO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal defects","termid":"PBO:0001159"}


id: GO:0045103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate filament-based process","termid":"GO:0045103"}


id: GO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute inflammatory response to non-antigenic stimuli such as heat or physical trauma.","definition_xrefs":["PMID:16459497","GOC:jal","PMID:9073326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}


id: MONDO:0010963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the WFS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"},{"relation_name":"is_a","term_name":"WFS1-related disorder","termid":"MONDO:0700293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 6","secondary_identifiers":["MEDGEN:331419","GARD:18101","MESH:C563421","OMIM:600965","UMLS:C1833021","DOID:0110584"],"synonyms":[{"name":"DFNA14","type":"narrow"},{"name":"DFNA38","type":"narrow"},{"name":"DFNA6","type":"narrow"},{"name":"WFS1 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 14","type":"narrow"},{"name":"autosomal dominant deafness 38","type":"narrow"},{"name":"autosomal dominant deafness 6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in WFS1","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 6","type":"narrow"},{"name":"deafness, autosomal dominant 14","type":"narrow"},{"name":"deafness, autosomal dominant 38","type":"narrow"},{"name":"deafness, autosomal dominant 6","type":"narrow"},{"name":"deafness, autosomal dominant 6/14/38","type":"narrow"},{"name":"deafness, autosomal dominant type 6","type":"narrow"}],"termid":"MONDO:0010963","xrefs":{"Monarch":{"xref_id":"0010963"}}}


id: PBO:0067191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 253, pseudogene","termid":"PBO:0067191"}


id: PBO:0047786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 3","termid":"PBO:0047786"}


id: GO:1901194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of formation of translation preinitiation complex","termid":"GO:1901193"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"negatively_regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of translation preinitiation complex","synonyms":[{"name":"down regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"down regulation of formation of translation preinitiation complex","type":"exact"},{"name":"down regulation of translation preinitiation complex assembly","type":"exact"},{"name":"down-regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"down-regulation of formation of translation preinitiation complex","type":"exact"},{"name":"down-regulation of translation preinitiation complex assembly","type":"exact"},{"name":"downregulation of formation of translation pre-initiation complex","type":"exact"},{"name":"downregulation of formation of translation preinitiation complex","type":"exact"},{"name":"downregulation of translation preinitiation complex assembly","type":"exact"},{"name":"inhibition of formation of translation pre-initiation complex","type":"exact"},{"name":"inhibition of formation of translation preinitiation complex","type":"narrow"},{"name":"inhibition of translation preinitiation complex assembly","type":"exact"},{"name":"negative regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"negative regulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901194"}


id: PBO:0058000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3924","termid":"PBO:0058000"}


id: FYPO:0001296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of oleoyl-CoA ligase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal oleoyl-CoA ligase activity","synonyms":[{"name":"normal oleoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001296"}


id: MONDO:0033682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"immuno-osseous dysplasia","termid":"MONDO:0015708"},{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"skeletal dysplasia-T-cell immunodeficiency-developmental delay syndrome","secondary_identifiers":["UMLS:C5567899","MEDGEN:1799322","Orphanet:508533","GARD:22070"],"termid":"MONDO:0033682","xrefs":{"Monarch":{"xref_id":"0033682"}}}


id: FYPO:0005749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation during glucose starvation","synonyms":[{"name":"decreased protein phosphorylation during glucose depletion","type":"exact"},{"name":"decreased protein phosphorylation during glucose deprivation","type":"exact"},{"name":"decreased protein phosphorylation during glucose limitation","type":"related"},{"name":"reduced protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0005749"}


id: GO:0030557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in a tRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA binding","termid":"GO:0000049"},{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tRNA modification guide activity","termid":"GO:0030557"}


id: PR:O94502
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 41 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03222","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C12D12.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.05c","secondary_identifiers":["UniProtKB:O94502"],"synonyms":[{"name":"Spom972h-SLC25A41","type":"exact"}],"termid":"PR:O94502"}


id: PBO:0082149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-protein thioesterase responsible for depalmitoylation of Gpa1p; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and nucleus and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0082149"}


id: PBO:0079624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 N","termid":"PBO:0079624"}


id: GO:0051391
data:
  {"annotated_genes":["SJAG_01638","SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74157,109274],"is_not":false,"summary":null,"term":"GO:0051391"}]},"cv_name":"biological_process","definition":"The modification of tRNA structure by addition of an acetyl group to tRNA. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"RNA acetylation","termid":"GO:1990884"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01638":null,"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA acetylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051391","terms_by_termid":{"GO:0051391":null}}


id: PBO:0092761
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_throughput_type","termid":"PBO:0092761"}


id: MONDO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-heritable difficulty in distinguishing colors.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color vision disorder","termid":"MONDO:0001703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired color blindness","secondary_identifiers":["DOID:13912","MEDGEN:57828","SCTID:71676008","UMLS:C0155018","ICD10CM:H53.52","ICD9:368.55","NCIT:C118712"],"synonyms":[{"name":"acquired color vision deficiencies","type":"exact"},{"name":"acquired color vision deficiency","type":"exact"},{"name":"acquired color vision disorder","type":"exact"},{"name":"acquired colour vision deficiencies","type":"exact"},{"name":"acquired colour vision deficiency","type":"exact"},{"name":"acquired colour vision disorder","type":"exact"}],"termid":"MONDO:0001828","xrefs":{"Monarch":{"xref_id":"0001828"}}}


id: SO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A part of a match, for example an hsp from blast is a match_part.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"},{"relation_name":"part_of","term_name":"match","termid":"SO:0000343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"match_part","synonyms":[{"name":"match part","type":"exact"}],"termid":"SO:0000039"}


id: SO:0001445
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons ACN (ACT, ACC, ACA and ACG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine","synonyms":[{"name":"T","type":"exact"},{"name":"Thr","type":"exact"}],"termid":"SO:0001445"}


id: MOD:02041
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-arginine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-arginine residue","synonyms":[{"name":"XlnkArg","type":"exact"}],"termid":"MOD:02041"}


id: GO:0061557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a trigeminal ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion maturation","termid":"GO:0061558"},{"relation_name":"part_of","term_name":"trigeminal nerve maturation","termid":"GO:0021635"},{"relation_name":"part_of","term_name":"trigeminal ganglion development","termid":"GO:0061551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion maturation","synonyms":[{"name":"trigeminal ganglia maturation","type":"related"}],"termid":"GO:0061557"}


id: PBO:0087521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of HIR nucleosome assembly complex; involved in regulation of histone gene transcription; recruits Swi-Snf complexes to histone gene promoters; promotes heterochromatic gene silencing with Asf1p; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087521"}


id: MONDO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"senile entropion","secondary_identifiers":["DOID:12836","MEDGEN:509837","SCTID:55408009","ICD9:374.01","UMLS:C0155188"],"synonyms":[{"name":"involutional entropion","type":"exact"}],"termid":"MONDO:0001591","xrefs":{"Monarch":{"xref_id":"0001591"}}}


id: PBO:0004659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hira protein, histone chaperone Hip1","termid":"PBO:0004659"}


id: PBO:0048030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 1 pseudogene 1","termid":"PBO:0048030"}


id: GO:0090661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A box H/ACA ribonucleoprotein complex that contains the RNA component of vertebrate telomerase, the enzyme essential for the replication of chromosome termini in most eukaryotes. This ribonucleoprotein complex is a structural box H/ACA RNP, which does not have the catalytic pseudouridylation function shared by the majority of H/ACA RNPs present in the cell.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:jbu","PMID:22527283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA RNP complex","termid":"GO:0072588"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"telomerase holoenzyme complex","termid":"GO:0005697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"box H/ACA telomerase RNP complex","termid":"GO:0090661"}


id: PBO:0041917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 1","termid":"PBO:0041917"}


id: PBO:0110031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 3","termid":"PBO:0110031"}


id: PBO:0053202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 1","termid":"PBO:0053202"}


id: PBO:0108581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, human ATXN10 ortholog","termid":"PBO:0108581"}


id: GO:0052909
data:
  {"annotated_genes":["SJAG_02821"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70128],"is_not":false,"summary":null,"term":"GO:0052909"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 S-adenosyl-L-methionine + adenine(1779)/adenine(1780) in 18S rRNA = 4 S-adenosyl-L-homocysteine + N(6)-dimethyladenine(1779)/N(6)-dimethyladenine(1780) in 18S rRNA.","definition_xrefs":["RHEA:42780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine-N6,N6-)-dimethyltransferase activity","termid":"GO:0000179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.1.1.183","MetaCyc:RXN-11634"],"synonyms":[{"name":"M(6)(2)A dimethylase activity","type":"broad"}],"termid":"GO:0052909","terms_by_termid":{"GO:0052909":null}}


id: MONDO:0032619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 14","secondary_identifiers":["MEDGEN:1648440","UMLS:C4748777","OMIM:618236","DOID:0112094","GARD:16322"],"synonyms":[{"name":"MC1DN14","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 14","type":"related"}],"termid":"MONDO:0032619","xrefs":{"Monarch":{"xref_id":"0032619"}}}


id: GO:0022610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The attachment of a cell or organism to a substrate, another cell, or other organism. Biological adhesion includes intracellular attachment between membrane regions.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete biological adhesion (obsolete GO:0022610)","termid":"GO:0022610"}


id: MONDO:0019500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extragonadal teratoma is an extremely rare, benign or malignant germ cell tumor characterized, clinically, by a teratoma presenting in an extragonadal location (e.g. retroperitoneum, mediastinum, craniofacial or sacrococcygeal region, intraosseous, solid organs) and, histologically, by displaying well-differentiated structures, as well as immature elements. Presenting symptoms are variable depending on size and location of tumor.","definition_xrefs":["Orphanet:883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal non-dysgerminomatous germ cell tumor","termid":"MONDO:0020539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extragonadal teratoma","secondary_identifiers":["GARD:18711","NCIT:C189045","SCTID:768937006","UMLS:C4708601","MESH:D013724","MedDRA:10043276","MEDGEN:1646497"],"termid":"MONDO:0019500","xrefs":{"Monarch":{"xref_id":"0019500"}}}


id: PBO:0048870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A4 pseudogene 1","termid":"PBO:0048870"}


id: PBO:0081089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 19","termid":"PBO:0081089"}


id: PBO:0073303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine active site containing 1","termid":"PBO:0073303"}


id: PBO:0076570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3K","termid":"PBO:0076570"}


id: PBO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc20/Fizzy subfamily","termid":"PBO:0000189"}


id: PBO:0045876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta","termid":"PBO:0045876"}


id: GO:0098038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process by which a transposable element is excised from the donor site and integrated at the target site without replication of the element. Also referred to as cut-and-paste transposition.","definition_xrefs":["PMID:2553270","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA transposition","termid":"GO:0006313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"non-replicative DNA transposition","synonyms":[{"name":"cut-and-paste transposition","type":"exact"},{"name":"non-replicative transposition, DNA-mediated","type":"exact"}],"termid":"GO:0098038"}


id: GO:0170023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific soluble sweet compound has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:24474785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic taste receptor activity","termid":"GO:0170021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0038023","GO:0022857"],"is_obsolete":false,"name":"ionotropic sweet taste receptor activity","termid":"GO:0170023"}


id: PBO:0034463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_bleomycin","termid":"PBO:0034463"}


id: FYPO:0007490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a mannosyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal mannosyltransferase activity","termid":"FYPO:0007490"}


id: PBO:0048372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAR1 divergent transcript","termid":"PBO:0048372"}


id: PBO:0066580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of hemoglobinization and erythroid cell expansion","termid":"PBO:0066580"}


id: GO:0030944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a KDEL sequence, the C terminus tetrapeptide sequence Asp-Asp-Glu-Leu found in proteins that are to be retained in the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER retention sequence binding","termid":"GO:0046923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0005048","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DDEL sequence binding","termid":"GO:0030944"}


id: MONDO:0009876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An isolated growth hormone deficiency characterized by autosomal recessive inheritance of severe dwarfism with onset by 6 months of age and variable development of antibodies to growth hormone following exogenous supplementation that has material basis in null mutations in the GH1 gene on chromosome 17q23.3.","definition_xrefs":["DOID:0060873","PMID:8288694","PMID:16060904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital growth hormone deficiency","termid":"MONDO:0000050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated growth hormone deficiency type IA","secondary_identifiers":["OMIM:262400","Orphanet:231662","SCTID:237837007","GARD:7399","MEDGEN:90986","ICD9:259.4","MESH:C537404","UMLS:C0342573"],"synonyms":[{"name":"Growth hormone deficiency, isolated autosomal recessive","type":"related"},{"name":"Growth hormone deficiency, isolated, autosomal recessive","type":"related"},{"name":"IGHD 1A","type":"related"},{"name":"IGHD IA","type":"exact"},{"name":"IGHD1A","type":"related"},{"name":"ILLIG type growth hormone deficiency","type":"related"},{"name":"Illig-type Growth hormone deficiency","type":"related"},{"name":"Illig-type growth hormone deficiency","type":"exact"},{"name":"autosomal recessive isolated growth hormone deficiency","type":"exact"},{"name":"congenital IGHD","type":"related"},{"name":"congenital IGHD type IA","type":"exact"},{"name":"congenital isolated GH deficiency","type":"related"},{"name":"congenital isolated GH deficiency type IA","type":"exact"},{"name":"congenital isolated growth hormone deficiency","type":"related"},{"name":"congenital isolated growth hormone deficiency type IA","type":"exact"},{"name":"growth hormone deficiency, isolated, type IA","type":"exact"},{"name":"isolated Growth hormone deficiency, type 1A","type":"related"},{"name":"isolated growth hormone deficiency type 1A","type":"related"},{"name":"isolated growth hormone deficiency type IA","type":"exact"},{"name":"isolated growth hormone deficiency, type IA","type":"related"},{"name":"non-acquired isolated growth hormone deficiency","type":"related"},{"name":"pituitary dwarfism 1","type":"related"},{"name":"pituitary dwarfism I","type":"exact"},{"name":"primordial dwarfism","type":"exact"},{"name":"sexual ateleiotic dwarfism","type":"exact"}],"termid":"MONDO:0009876","xrefs":{"Monarch":{"xref_id":"0009876"}}}


id: PBO:0074644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 36A","termid":"PBO:0074644"}


id: FYPO:0007502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:16111942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body during meiosis I","termid":"FYPO:0007482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000054","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during prophase I","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during prophase I","type":"exact"},{"name":"decreased protein localization to meiotic SPB during prophase I","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during meiotic prophase I","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during prophase of first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during prophase I","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during prophase I","type":"exact"}],"termid":"FYPO:0007502"}


id: GO:1904239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904239"}


id: PBO:0088839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog4","termid":"PBO:0088839"}


id: GO:0060507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an epidermal growth factor-type receptor binding to one of its physiological ligands. This process contributes to lung development.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"part_of","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epidermal growth factor receptor signaling pathway involved in lung development","synonyms":[{"name":"epidermal growth factor receptor signalling pathway involved in lung development","type":"exact"}],"termid":"GO:0060507"}


id: PBO:0055429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2859","termid":"PBO:0055429"}


id: GO:0052745
data:
  {"annotated_genes":["SJAG_04870","SJAG_00063","SJAG_01702","SJAG_04067","SJAG_03739","SJAG_04545","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90556,108863,108864],"is_not":false,"summary":null,"term":"GO:0052745"},{"annotations":[79072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008934"},{"annotations":[110257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990651"},{"annotations":[110258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990649"},{"annotations":[110259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052659"},{"annotations":[117548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052829"},{"annotations":[75638,76773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052658"},{"annotations":[117549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004441"},{"annotations":[110261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990650"},{"annotations":[110262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990640"},{"annotations":[110263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990648"},{"annotations":[110264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030487"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphate(n) + H2O = inositol phosphate(n-1) + phosphate. This reaction is the removal of a phosphate group from an inositol phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_01702":null,"SJAG_01970":null,"SJAG_03739":null,"SJAG_04067":null,"SJAG_04545":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0052745","terms_by_termid":{"GO:0004441":null,"GO:0008934":null,"GO:0030487":null,"GO:0052658":null,"GO:0052659":null,"GO:0052745":null,"GO:0052829":null,"GO:1990640":null,"GO:1990648":null,"GO:1990649":null,"GO:1990650":null,"GO:1990651":null}}


id: GO:0009990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition involving the deposition of specific pathways in the extracellular matrix that guide migrating cells.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix recognition","termid":"GO:0009989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"contact guidance","termid":"GO:0009990"}


id: GO:1901382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chorionic trophoblast cell proliferation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"chorionic trophoblast cell proliferation","termid":"GO:0097360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chorionic trophoblast cell proliferation","termid":"GO:1901382"}


id: PBO:0059159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPPED2 antisense RNA 1","termid":"PBO:0059159"}


id: MOD:01987
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-serine.","definition_xrefs":["RESID:AA0624","PubMed:21786372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked D-serine residue","termid":"MOD:02064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(L-cystein-S-yl)-D-serine","synonyms":[{"name":"(2R,5S)-2,5-diamino-5-carboxy-6-hydroxy-4-thiahexanoic acid","type":"exact"},{"name":"(2S)-2-amino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-3-hydroxypropanoic acid","type":"exact"}],"termid":"MOD:01987"}


id: PBO:0064395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNN interacting serine and arginine rich protein","termid":"PBO:0064395"}


id: PBO:0039530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 34A","termid":"PBO:0039530"}


id: MONDO:0004504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A urethra cancer that involves the penis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penile cancer","termid":"MONDO:0001325"},{"relation_name":"is_a","term_name":"male urethral cancer","termid":"MONDO:0004197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"penile urethral cancer","secondary_identifiers":["UMLS:C1518950","DOID:8223","NCIT:C39868","MEDGEN:275350"],"synonyms":[{"name":"penile urethral malignant neoplasm","type":"exact"},{"name":"penis urethra cancer","type":"exact"},{"name":"urethra cancer of penis","type":"exact"}],"termid":"MONDO:0004504","xrefs":{"Monarch":{"xref_id":"0004504"}}}


id: PBO:0113545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter that mediates zinc transport into vacuole; overexpression confers resistance to cobalt and rhodium; targeted to vacuole via AP-3 pathway; protein abundance increases in response to DNA replication stress; COT1 has a paralog, ZRC1, that arose from the whole genome duplication","termid":"PBO:0113545"}


id: PBO:0068600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 51, pseudogene","termid":"PBO:0068600"}


id: MOD:00109
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to L-valine amide.","definition_xrefs":["PubMed:5465996","RESID:AA0100","PubMed:2578459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine amide","synonyms":[{"name":"(2S)-2-amino-3-methylbutanamide","type":"exact"},{"name":"L-valine amide","type":"exact"},{"name":"MOD_RES Valine amide","type":"exact"},{"name":"ValN","type":"exact"},{"name":"valinamide","type":"exact"}],"termid":"MOD:00109"}


id: FYPO:0002300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores with elongated germ tubes and elongated vegetative cells. The elongated cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores with elongated germ tubes and elongated cells (obsolete FYPO:0002300)","synonyms":[{"name":"inviable mixed population including germinated spores with elongated germ tubes and long cells","type":"exact"}],"termid":"FYPO:0002300"}


id: PBO:0025466
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mrc1 associates with origins later than MCM complex, but slightly earlier than Cdc45","termid":"PBO:0025466"}


id: PBO:0069845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1131, pseudogene","termid":"PBO:0069845"}


id: PBO:0087063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L30; involved in pre-rRNA processing in the nucleolus; autoregulates splicing of its transcript; homologous to mammalian ribosomal protein L30, no bacterial homolog","termid":"PBO:0087063"}


id: MONDO:0013047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that affects how the body breaks down sugar to use as energy in muscle cells. People withthis conditionexperience fatigue, muscle pain, and cramps during exercise (exercise intolerance). In some people,high-intensity exercise or other strenuous activity leads to the breakdown of muscle tissue (rhabdomyolysis), which can lead to myoglobinuria (rust-colored urine indicating breakdown of muscle tissue) and kidney damage. A skin rash may also develop. The severity of the signs and symptoms varies greatly among affected individuals. Lactate dehydrogenase A deficiency is caused by mutations in the LDHA gene. This condition is inherited in an autosomal recessive pattern.","definition_xrefs":["GARD:0003160"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular glycogenosis (obsolete MONDO:0016118)","termid":"MONDO:0016118"},{"relation_name":"excluded_subClassOf","term_name":"glycogen storage disease due to lactate dehydrogenase deficiency","termid":"MONDO:0016527"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease due to lactate dehydrogenase M-subunit deficiency","secondary_identifiers":["UMLS:C2931743","HGNC:6535","Orphanet:284426","MEDGEN:419152","MESH:C538133","SCTID:237982007","GARD:3160","ICD9:271.8","NANDO:1200833","OMIM:612933"],"synonyms":[{"name":"GSD 11","type":"related"},{"name":"GSD XI","type":"related"},{"name":"GSD due to lactate dehydrogenase M-subunit deficiency","type":"exact"},{"name":"GSD type 11","type":"related"},{"name":"GSD11","type":"related"},{"name":"LDH-M subunit deficiency","type":"exact"},{"name":"LDHA glycogen storage disease","type":"exact"},{"name":"glycogen storage disease XI","type":"related"},{"name":"glycogen storage disease caused by mutation in LDHA","type":"exact"},{"name":"glycogen storage disease type 11","type":"related"},{"name":"glycogenosis due to lactate dehydrogenase M-subunit deficiency","type":"exact"},{"name":"glycogenosis type 11","type":"related"},{"name":"lactate dehydrogenase A deficiency","type":"exact"},{"name":"lactate dehydrogenase deficiency type A","type":"related"}],"termid":"MONDO:0013047","xrefs":{"Monarch":{"xref_id":"0013047"}}}


id: PBO:0005175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Cwf23","termid":"PBO:0005175"}


id: PBO:0064290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen like B1","termid":"PBO:0064290"}


id: SO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature where there has been exchange of genetic material in the event of mitosis or meiosis","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_feature","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"recombination feature","type":"exact"}],"termid":"SO:0000298"}


id: PBO:0034338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_1_orthology_relationship_with","termid":"PBO:0034338"}


id: GO:1900061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in calcium-mediated signaling.","definition_xrefs":["GOC:TermGenie","PMID:9407035","PMID:9407036"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in calcium-mediated signaling (obsolete GO:1900061)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter of calcium signaling","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter of calcium signalling","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium ion signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium signalling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium-mediated signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium-mediated signalling","type":"related"},{"name":"positive regulation of transcription from Pol II promoter of calcium ion signaling","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter of calcium signaling","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter of calcium signalling","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter of calcium-mediated signaling","type":"related"},{"name":"positive regulation of transcription from Pol II promoter of calcium-mediated signalling","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in calcium-mediated signaling","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium signaling","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium signalling","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium signaling","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium signalling","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium signaling","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium signalling","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium signaling","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium signalling","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium signaling","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium signalling","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"exact"}],"termid":"GO:1900061"}


id: PBO:0069832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1118, pseudogene","termid":"PBO:0069832"}


id: PBO:0029623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_hydroxyurea","termid":"PBO:0029623"}


id: MONDO:0100488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Germline pathogenic or likely pathogenic variants in the CDH1 gene predispose to hereditary diffuse gastric cancer, a cancer susceptibility syndrome inherited in an autosomal dominant pattern, initially characterized by the increased risk for diffuse gastric cancer (DGC) but subsequently well documented to be associated with lobular breast cancer (LBC) in women.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH1-related diffuse gastric and lobular breast cancer syndrome","secondary_identifiers":["OMIM:137215"],"synonyms":[{"name":"DGLBC","type":"exact"},{"name":"HDGC","type":"exact"},{"name":"LBC","type":"exact"},{"name":"diffuse gastric and lobular breast cancer syndrome","type":"exact"},{"name":"gastric cancer, familial diffuse breast cancer, lobular","type":"exact"},{"name":"gastric cancer, hereditary diffuse","type":"exact"}],"termid":"MONDO:0100488","xrefs":{"Monarch":{"xref_id":"0100488"}}}


id: FYPO:0003200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a transcription regulatory region by a gene product is normal (i.e. indistinguishable from wild type) during a cellular response to phosphate starvation. The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription regulatory region sequence-specific DNA binding","termid":"FYPO:0007382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal transcription regulatory region sequence-specific DNA binding during cellular response to phosphate starvation","synonyms":[{"name":"normal promoter binding during cellular response to phosphate starvation","type":"related"},{"name":"normal sequence-specific DNA binding at transcription regulatory region during cellular response to phosphate starvation","type":"exact"},{"name":"normal transcription regulatory region binding during cellular response to phosphate starvation","type":"exact"},{"name":"normal transcription regulatory region binding during phosphate starvation","type":"exact"}],"termid":"FYPO:0003200"}


id: PBO:0048973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 2 pseudogene 2","termid":"PBO:0048973"}


id: PATO:0000917
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000917 relative thickness (obsolete PATO:0000917)","termid":"PATO:0000917"}


id: GO:1904360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spore germination.","definition_xrefs":["GO_REF:0000058","PMID:14718564","PMID:8798577","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of spore germination","termid":"GO:1904359"},{"relation_name":"negatively_regulates","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spore germination","secondary_identifiers":["GO:0075008"],"synonyms":[{"name":"down regulation of spore germination","type":"exact"},{"name":"down-regulation of spore germination","type":"exact"},{"name":"downregulation of spore germination","type":"exact"},{"name":"inhibition of spore germination","type":"narrow"},{"name":"negative regulation of spore germination on or near host","type":"narrow"}],"termid":"GO:1904360"}


id: PR:O14337
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L7, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.02c","synonyms":[{"name":"Spom972h-mrpl7","type":"exact"}],"termid":"PR:O14337"}


id: PBO:0042234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 6 (pseudogene)","termid":"PBO:0042234"}


id: PBO:0001406
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlapping genome wide occupancy in coding regions Nap1/Hrp1/Hrp3","termid":"PBO:0001406"}


id: PBO:0026982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Brc1_foci","termid":"PBO:0026982"}


id: PBO:0089993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ste13/Dhh1","termid":"PBO:0089993"}


id: GO:0061335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of an epithelial cell dependent on cycles of endoreplication, where growth contributes to the shaping of the Malpighian tubule.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph","PMID:19783135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth involved in Malpighian tubule morphogenesis","termid":"GO:0061335"}


id: PBO:0004787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein (predicted)","termid":"PBO:0004787"}


id: GO:0051523
data:
  {"annotated_genes":["SJAG_02838","SJAG_03486","SJAG_03705","SJAG_04322","SJAG_01456","SJAG_04724","SJAG_00216"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89885,101641,105409,108802,112737,118485,119916],"is_not":false,"summary":null,"term":"GO:0051523"}]},"cv_name":"biological_process","definition":"The process in which a cell switches from monopolar cell growth to bipolar cell growth.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"},{"relation_name":"is_a","term_name":"regulation of direction of cell growth","termid":"GO:0061389"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_01456":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"cell growth mode switching, monopolar to bipolar","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NETO","type":"narrow"},{"name":"new end take off","type":"narrow"}],"termid":"GO:0051523","terms_by_termid":{"GO:0051523":null}}


id: MOD:01947
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-threonine residue and an L-aspartic acid residue with an ester bond to form  O-(L-isoaspartyl)-L-threonine.","definition_xrefs":["PubMed:8706862","RESID:AA0525#TDX","PubMed:17157318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"O-(L-isoaspartyl)-L-threonine","termid":"MOD:01978"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoaspartyl)-L-threonine (cross-link)","synonyms":[{"name":"(2S)-2-amino-4-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-3-amino-3-carboxypropanoyl]oxy)propanoic acid","type":"exact"},{"name":"CROSSLNK isoaspartyl threonine ester (Thr-Asp)","type":"exact"},{"name":"O(beta)-(beta-aspartyl)threonine","type":"exact"},{"name":"O-(L-isoaspartyl)-L-threonine","type":"exact"},{"name":"O3-(isoaspartyl)-threonine","type":"exact"}],"termid":"MOD:01947"}


id: MONDO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebroretinal microangiopathy with calcifications and cysts (obsolete MONDO:0000221)","termid":"MONDO:0000221","xrefs":{"Monarch":{"xref_id":"0000221"}}}


id: PBO:0080255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 18 pseudogene","termid":"PBO:0080255"}


id: PBO:0048386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycyl-tRNA synthetase 1","termid":"PBO:0048386"}


id: MONDO:0020727
data:
  {"annotated_genes":["SJAG_02564"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88714],"is_not":false,"summary":null,"term":"MONDO:0020727"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 22","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616045","MEDGEN:863499","UMLS:C4015062","DOID:0111498"],"synonyms":[{"name":"COXPD22","type":"related"},{"name":"combined oxidative phosphorylation deficiency 22","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 22","type":"related"}],"termid":"MONDO:0020727","terms_by_termid":{"MONDO:0020727":null},"xrefs":{"Monarch":{"xref_id":"0020727"}}}


id: FYPO:0000484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abolished meiotic recombination","synonyms":[{"name":"absent meiotic recombination","type":"exact"},{"name":"meiotic recombination abolished","type":"exact"},{"name":"meiotic recombination: absent","type":"related"}],"termid":"FYPO:0000484"}


id: GO:0102476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pinocembrin + NADPH + O2 + H+ = 2,5,7-trihydroxyflavanone + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pinocembrin 2-hydroxylase activity (obsolete GO:0102476)","termid":"GO:0102476"}


id: GO:2001132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a 3-(methylthio)propionic acid.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0006790","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:2001132"}


id: PBO:0054875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2289","termid":"PBO:0054875"}


id: PBO:0084573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein of the plasma membrane and ER; interacts specifically in vivo with the phospholipid translocase (flippase) Dnf1p; involved in translocation of phospholipids and alkylphosphocholine drugs across the plasma membrane; null mutant requires tryptophan due to mislocalization of tryptophan permease Tat2p","termid":"PBO:0084573"}


id: PBO:0051019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein acid labile subunit","termid":"PBO:0051019"}


id: PBO:0028573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_monoseptate_cell_with_mitotic_cell_cycle_arrest_before_cell_separation","termid":"PBO:0028573"}


id: MONDO:0014582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal recessive inheritance of postsynaptic neuromuscular junction defects, early-onset muscle weakness, and low amplitude of the miniature endplate potential and current that has material basis in ompound heterozygous mutation in the CHRNB1 gene on chromosome 17p13.","definition_xrefs":["PMID:25792100","PMID:10562302","DOID:0110680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 2C","secondary_identifiers":["MEDGEN:903254","OMIM:616314","UMLS:C4225373","GARD:16083"],"synonyms":[{"name":"CMS2C","type":"exact"},{"name":"congenital myasthenic syndrome 2C associated with acetylcholine receptor deficiency","type":"exact"},{"name":"congenital myasthenic syndrome type 2C","type":"exact"},{"name":"myasthenic syndrome, congenital, 2C, associated with acetylcholine receptor deficiency","type":"related"}],"termid":"MONDO:0014582","xrefs":{"Monarch":{"xref_id":"0014582"}}}


id: PBO:0044952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone)","termid":"PBO:0044952"}


id: MONDO:1012781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any paroxysmal dyskinesia that occurs in dogs due to a mutation in the PIGN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dyskinesia, dog","termid":"MONDO:1010422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal dyskinesia, PIGN-related, dog","secondary_identifiers":["OMIA:002084-9615"],"termid":"MONDO:1012781","xrefs":{"Monarch":{"xref_id":"1012781"}}}


id: GO:0006379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cleavage (obsolete GO:0006379)","synonyms":[{"name":"cleavage stimulation factor activity","type":"related"}],"termid":"GO:0006379"}


id: GO:0042331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to light.","definition_xrefs":["GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phototaxis","secondary_identifiers":["GO:0046953","Wikipedia:Phototaxis"],"synonyms":[{"name":"phototactic behavior","type":"exact"},{"name":"phototactic behaviour","type":"exact"},{"name":"taxis in response to light","type":"exact"}],"termid":"GO:0042331"}


id: MONDO:1012330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laminitis, non-human animal","termid":"MONDO:1011767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminitis, horse","secondary_identifiers":["OMIA:001225-9796"],"termid":"MONDO:1012330","xrefs":{"Monarch":{"xref_id":"1012330"}}}


id: PBO:0030785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_vegetative_cell","termid":"PBO:0030785"}


id: MONDO:0011655
data:
  {"annotated_genes":["SJAG_00490"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88135],"is_not":false,"summary":null,"term":"MONDO:0011655"}]},"cv_name":"mondo","definition":"An alveolar soft part sarcoma occurring in adults. The most common site of involvement is the extremity, particularly the deep soft tissues of the thigh.","definition_xrefs":["NCIT:C7943"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skeletal muscle cancer","termid":"MONDO:0002847"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00490":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"alveolar soft part sarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D018234","EFO:0007143","MEDGEN:61652","NANDO:2200063","Orphanet:163699","NORD:760","ICD9:171.9","GARD:5654","UMLS:C0206657","OMIM:606243","MedDRA:10001882","DOID:4239","ONCOTREE:ASPS","SCTID:404056007","ICDO:9581/3","HP:0012218","NCIT:C3750"],"synonyms":[{"name":"ASPS","type":"exact"},{"name":"adult alveolar soft Part sarcoma","type":"exact"},{"name":"adult alveolar soft part sarcoma","type":"exact"},{"name":"adult alveolar soft-Part sarcoma","type":"exact"},{"name":"alveolar soft PART sarcoma","type":"related"},{"name":"alveolar soft Part sarcoma","type":"exact"},{"name":"alveolar soft part sarcoma","type":"exact"},{"name":"alveolar soft part sarcoma (disease)","type":"exact"},{"name":"alveolar soft tissue sarcoma","type":"related"},{"name":"alveolar soft-part sarcoma","type":"exact"},{"name":"alveolar soft-tissue sarcoma","type":"related"},{"name":"childhood alveolar soft part sarcoma","type":"narrow"},{"name":"paediatric alveolar soft Part sarcoma","type":"narrow"},{"name":"pediatric alveolar soft Part sarcoma","type":"narrow"}],"termid":"MONDO:0011655","terms_by_termid":{"MONDO:0011655":null},"xrefs":{"Monarch":{"xref_id":"0011655"}}}


id: PBO:0046471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erbb2 interacting protein","termid":"PBO:0046471"}


id: PBO:0091160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-specific trancription factor Pc","termid":"PBO:0091160"}


id: PBO:0017990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 family Ran GDP/GTP exchange factor","termid":"PBO:0017990"}


id: MONDO:0003427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign lung neoplasm characterized by the presence of a fibrovascular stroma lined by cuboidal to columnar cells. Patients are usually asymptomatic and it is incidentally discovered as a pulmonary nodule during chest X-ray examination. Surgical excision is curative.","definition_xrefs":["NCIT:C3494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenoma","termid":"MONDO:0002533"},{"relation_name":"is_a","term_name":"bronchial neoplasm","termid":"MONDO:0002807"},{"relation_name":"is_a","term_name":"lung adenoma","termid":"MONDO:0003422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchus adenoma","secondary_identifiers":["UMLS:C0149845","DOID:5391","MEDGEN:56206","ICDO:8260/0"],"synonyms":[{"name":"adenoma of bronchus","type":"exact"},{"name":"adenoma of the bronchus","type":"exact"},{"name":"adenoma, bronchial, benign","type":"exact"},{"name":"bronchial adenoma","type":"exact"},{"name":"bronchial adenoma NOS (morphologic abnormality)","type":"exact"},{"name":"bronchus adenoma","type":"exact"},{"name":"lung papillary adenoma","type":"exact"},{"name":"papillary adenoma of type II pneumocytes","type":"exact"},{"name":"peripheral papillary tumor of type II pneumocytes","type":"exact"},{"name":"peripheral papillary tumour of type II pneumocytes","type":"exact"},{"name":"type II pneumocyte adenoma","type":"exact"}],"termid":"MONDO:0003427","xrefs":{"Monarch":{"xref_id":"0003427"}}}


id: PATO:0000601
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000601 spatial value (obsolete PATO:0000601)","termid":"PATO:0000601"}


id: GO:0097051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the endoplasmic reticulum membrane.","definition_xrefs":["PMID:9388185","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to endoplasmic reticulum","termid":"GO:0072599"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to endoplasmic reticulum membrane","synonyms":[{"name":"establishment of protein localisation in endoplasmic reticulum membrane","type":"exact"},{"name":"establishment of protein localization in endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0097051"}


id: MOD:00179
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamyl 5-glycerylphosphorylethanolamine.","definition_xrefs":["RESID:AA0170","PubMed:2511205","PubMed:9662537","Unimod:396#E","PubMed:2569467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamyl 5-glycerylphosphorylethanolamine","synonyms":[{"name":"(S)-2-amino-5-[2-([([2,3-dihydroxypropyl]oxy)(hydroxy)phosphoryl]oxy)ethyl]amino-5-oxopentanoic acid","type":"exact"},{"name":"5-L-glutamyl glycerylphosphorylethanolamine","type":"exact"},{"name":"5GlyceroPEtAGlu","type":"exact"},{"name":"GlycerylPE","type":"related"},{"name":"L-glutamyl 5-glycerophosphoethanolamine","type":"exact"},{"name":"L-glutamyl 5-glycerophosphorylethanolamine","type":"exact"},{"name":"L-glutamyl 5-glycerylphosphorylethanolamine","type":"exact"},{"name":"MOD_RES 5-glutamyl glycerylphosphorylethanolamine","type":"exact"},{"name":"glycerylphosphorylethanolamine","type":"related"}],"termid":"MOD:00179"}


id: GO:0001743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial developmental process that will lead to the formation of an eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens placode formation","synonyms":[{"name":"optic placode formation","type":"related"}],"termid":"GO:0001743"}


id: GO:0052841
data:
  {"annotated_genes":["SJAG_01154","SJAG_00244","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90557,117060,107139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052846"},{"annotations":[90558,107140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052847"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: bisdiphospho-1D-myo-inositol tetrakisphosphate + H2O = diphospho-1D-myo-inositol pentakisphosphate + phosphate.","definition_xrefs":["PMID:11502751","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol bisdiphosphate tetrakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855165","Reactome:R-HSA-2023973"],"termid":"GO:0052841","terms_by_termid":{"GO:0052846":null,"GO:0052847":null}}


id: PBO:0051260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-67-2 (pseudogene)","termid":"PBO:0051260"}


id: PBO:0051947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-trisphosphate 3-kinase A","termid":"PBO:0051947"}


id: FYPO:0004563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha-galactosidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal alpha-galactosidase activity","termid":"FYPO:0004563"}


id: PBO:0001038
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains RLM1 element","termid":"PBO:0001038"}


id: PBO:0079516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYMS opposite strand RNA","termid":"PBO:0079516"}


id: PBO:0059879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 2","termid":"PBO:0059879"}


id: PBO:0066677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLF pseudogene 1","termid":"PBO:0066677"}


id: PBO:0113204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondria-associated F-box protein; tether that anchors higher-functioning mitochondria at the mother cell distal tip throughout the cell cycle and at the bud tip prior to cytokinesis; role in maintenance of normal mitochondrial morphology and quality control; interacts with Skp1p through the F-box motif; asymmetrically localized to the mother cell through the cell cycle with some bud tip localization just before cytokinesis; function regulated by the bud site selection machinery","termid":"PBO:0113204"}


id: GO:0051394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of the nerve growth factor (NGF) receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of nerve growth factor receptor activity","synonyms":[{"name":"regulation of NGF receptor activity","type":"exact"}],"termid":"GO:0051394"}


id: GO:0050047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-leucine = (3R)-beta-leucine.","definition_xrefs":["RHEA:10284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"L-leucine 2,3-aminomutase activity","secondary_identifiers":["EC:5.4.3.7","MetaCyc:LEUCINE-23-AMINOMUTASE-RXN","KEGG_REACTION:R01091"],"synonyms":[{"name":"(2S)-alpha-leucine 2,3-aminomutase activity","type":"related"},{"name":"leucine 2,3-aminomutase activity","type":"related"}],"termid":"GO:0050047"}


id: PBO:0032731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase beta subunit Sir1","termid":"PBO:0032731"}


id: MONDO:0957112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic chloride channel defect","secondary_identifiers":["MEDGEN:1843259","GARD:19564","Orphanet:98739","UMLS:C5681687"],"termid":"MONDO:0957112","xrefs":{"Monarch":{"xref_id":"0957112"}}}


id: PBO:0087960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane protein with a highly basic C-terminal region","termid":"PBO:0087960"}


id: MONDO:0015962
data:
  {"annotated_genes":["SJAG_02977","SJAG_01896","SJAG_00516","SJAG_01370","SJAG_04260","SJAG_03371","SJAG_03375","SJAG_01183","SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[88876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"},{"annotations":[88744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"},{"annotations":[87429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859328"},{"annotations":[88502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013163"},{"annotations":[89056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010645"},{"annotations":[86848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"},{"annotations":[87268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044726"},{"annotations":[87972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"},{"annotations":[88653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubule disorder","termid":"MONDO:0021568"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null,"SJAG_01370":null,"SJAG_01896":null,"SJAG_02977":null,"SJAG_03371":null,"SJAG_03375":null,"SJAG_04260":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"inherited renal tubular disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680544","Orphanet:183592","GARD:20306","MEDGEN:1826140"],"synonyms":[{"name":"genetic renal tubular disease","type":"related"}],"termid":"MONDO:0015962","terms_by_termid":{"MONDO:0010359":null,"MONDO:0010645":null,"MONDO:0011268":null,"MONDO:0011301":null,"MONDO:0011422":null,"MONDO:0013163":null,"MONDO:0013458":null,"MONDO:0044726":null,"MONDO:0054565":null,"MONDO:0859328":null},"xrefs":{"Monarch":{"xref_id":"0015962"}}}


id: MONDO:0014300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Proximal myopathy with extrapyramidal signs is a rare, hereditary non-dystrophic myopathy characterized by proximal muscle weakness, delayed motor development, learning difficulties, and progressive extrapyramidal motor signs including chorea, dystonia and tremor. Variable additional features have been reported - ataxia, microcephaly, ophthalmoplegia, ptosis, and optic atrophy.","definition_xrefs":["Orphanet:401768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"proximal myopathy with extrapyramidal signs","secondary_identifiers":["OMIM:615673","MEDGEN:816615","UMLS:C3810285","DOID:0111335","GARD:12978"],"synonyms":[{"name":"MPXPS","type":"related"},{"name":"myopathy with extrapyramidal signs","type":"related"}],"termid":"MONDO:0014300","xrefs":{"Monarch":{"xref_id":"0014300"}}}


id: GO:0060329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based movement by which cytoplasmic actin filaments slide past one another resulting in a contraction that propels the cell in the direction that has been defined as the rear of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic actin-based contraction involved in rearward cell motility","synonyms":[{"name":"cytoplasmic actin-based contraction involved in rearward cell locomotion","type":"related"}],"termid":"GO:0060329"}


id: GO:0052171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring when the organism is in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development during symbiotic interaction (obsolete GO:0052171)","synonyms":[{"name":"growth or development during symbiotic interaction","type":"exact"}],"termid":"GO:0052171"}


id: GO:0047802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + S-(4-bromophenyl)-L-cysteine = (4-bromophenylsulfanyl)pyruvate + L-glutamate.","definition_xrefs":["RHEA:13485","EC:2.6.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"cysteine-conjugate transaminase activity","secondary_identifiers":["MetaCyc:CYSTEINE-CONJUGATE-TRANSAMINASE-RXN","KEGG_REACTION:R04338"],"synonyms":[{"name":"S-(4-bromophenyl)-L-cysteine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"cysteine conjugate aminotransferase activity","type":"related"},{"name":"cysteine-conjugate alpha-ketoglutarate transaminase (CAT-1)","type":"related"}],"termid":"GO:0047802"}


id: PR:O14346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02965","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.15c","secondary_identifiers":["UniProtKB:O14346"],"synonyms":[{"name":"3-hydroxyacyl-CoA dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HACD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PTPLB","type":"exact"}],"termid":"PR:O14346"}


id: PBO:0055622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3061","termid":"PBO:0055622"}


id: GO:0097310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the ribose of the first and second nucleotides of a 5'-capped mRNA.","definition_xrefs":["GOC:sp","PMID:20713356"],"gene_count":0,"genotype_count":0,"name":"obsolete cap2 mRNA methylation (obsolete GO:0097310)","synonyms":[{"name":"cap2 mRNA capping","type":"broad"}],"termid":"GO:0097310"}


id: PATO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the side of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laterally rotated","synonyms":[{"name":"externally rotated","type":"exact"}],"termid":"PATO:0002156"}


id: MONDO:0001233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute orbital inflammation","termid":"MONDO:0001230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orbital tenonitis","secondary_identifiers":["MEDGEN:509879","DOID:11233","SCTID:8976003","ICD9:376.04","UMLS:C0155259"],"synonyms":[{"name":"tenonitis","type":"exact"}],"termid":"MONDO:0001233","xrefs":{"Monarch":{"xref_id":"0001233"}}}


id: GO:0042924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently and stoichiometrically with neuromedin U, a hypothalamic peptide involved in energy homeostasis and stress responses.","definition_xrefs":["PMID:12584108","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide binding","termid":"GO:0042923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neuromedin U binding","synonyms":[{"name":"NMU binding","type":"exact"}],"termid":"GO:0042924"}


id: RO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is sequentially adjacent to y iff x and y do not overlap and if there are no base units intervening between x and y","direct_ancestors":[{"relation_name":"is_a","term_name":"does_not_overlap_sequence_of","termid":"RO:0002527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequentially_adjacent_to","termid":"RO:0002515"}


id: MONDO:0017329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial vesicoureteral reflux is a rare, non-syndromic urogenital tract malformation characterized by the familial occurrence of retrograde flow of urine from the bladder into the ureter and sometimes the kidneys. Patients may be asymptomatic or may present with recurrent, sometimes febrile, urinary tract infections that, in case of acute pyelonephritis, may lead to serious complications (renal scarring, hypertension, renal failure). Spontaneous resolution of the disorder is possible.","definition_xrefs":["Orphanet:289365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vesicoureteral reflux","termid":"MONDO:0006007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial vesicoureteral reflux","secondary_identifiers":["OMIMPS:193000","UMLS:C4706552","SCTID:763716008","GARD:17323","MEDGEN:1637583"],"synonyms":[{"name":"familial VUR","type":"exact"},{"name":"hereditary vesicoureteral reflux (disease)","type":"exact"}],"termid":"MONDO:0017329","xrefs":{"Monarch":{"xref_id":"0017329"}}}


id: MONDO:0016671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic hemoglobinopathy usually characterized by mild microcytic hemolysis and, very rarely, vaso-occlusive complications. Severe manifestations have been reported, including hematuria, splenic infarction, acute chest syndrome, acute episodes of pain and reversible bone marrow necrosis. The genotype is characterized by an HbS allele in combination with an HbE variant (beta26glu>lys); symptoms are due to the low allelic expression of HbE leading to HbS predominance (65+/-5%).","definition_xrefs":["Orphanet:251375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"sickle cell-hemoglobin E disease syndrome","secondary_identifiers":["UMLS:C1112747","MEDGEN:1669602","GARD:20700"],"synonyms":[{"name":"HbSE disease","type":"exact"}],"termid":"MONDO:0016671","xrefs":{"Monarch":{"xref_id":"0016671"}}}


id: GO:1900326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltotriulose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of maltotriulose transport","termid":"GO:1900324"},{"relation_name":"positively_regulates","term_name":"maltotriulose transport","termid":"GO:2001090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maltotriulose transport","synonyms":[{"name":"activation of maltotriulose transport","type":"narrow"},{"name":"up regulation of maltotriulose transport","type":"exact"},{"name":"up-regulation of maltotriulose transport","type":"exact"},{"name":"upregulation of maltotriulose transport","type":"exact"}],"termid":"GO:1900326"}


id: MONDO:1011620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumour that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wilms tumor, non-human animal","termid":"MONDO:1011439"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilms tumor, dog","secondary_identifiers":["OMIA:001142-9615"],"termid":"MONDO:1011620","xrefs":{"Monarch":{"xref_id":"1011620"}}}


id: PBO:0083777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nucleolar protein; putative DEAD-box RNA helicase required for maintenance of M1 dsRNA virus; involved in biogenesis of large (60S) ribosomal subunits","termid":"PBO:0083777"}


id: PBO:0004091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex Spc97/GCP2 subunit Alp4","termid":"PBO:0004091"}


id: PBO:0027851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_DNA_replication_during_replication_fork_arrest","termid":"PBO:0027851"}


id: GO:0005915
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells.","definition_xrefs":["ISBN:0815316208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction","termid":"GO:0005912"},{"relation_name":"part_of","term_name":"apical junction complex","termid":"GO:0043296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"zonula adherens","secondary_identifiers":["NIF_Subcellular:sao1400623473"],"synonyms":[{"name":"adhesion belt","type":"exact"},{"name":"belt desmosome","type":"exact"},{"name":"intermediate junction","type":"exact"},{"name":"zonula adhaerens","type":"exact"}],"termid":"GO:0005915"}


id: MONDO:0006530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pathologic process characterized by the proliferation of keratinizing squamous epithelium resulting in the accumulation of keratin and cells in the middle ear and/or mastoid. It may be congenital or acquired. If left untreated, it may increase in size and destroy adjacent structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cholesteatoma","secondary_identifiers":["EFO:1000675","SCTID:363668000","HP:0009797","ICD9:385.30","MESH:D002781","NCIT:C2944","DOID:869","UMLS:C0008373","MEDGEN:3043"],"synonyms":[{"name":"cholesteatoma","type":"exact"},{"name":"cholesteatoma (disease)","type":"exact"},{"name":"congenital cholesteatoma (type)","type":"related"},{"name":"primary acquired cholesteatoma (type)","type":"related"},{"name":"secondary acquired cholesteatoma (type)","type":"related"}],"termid":"MONDO:0006530","xrefs":{"Monarch":{"xref_id":"0006530"}}}


id: SO:0001215
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of an exon that encodes for protein sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_region","termid":"SO:0000852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_region_of_exon","synonyms":[{"name":"coding region of exon","type":"exact"}],"termid":"SO:0001215"}


id: PBO:0059781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 7","termid":"PBO:0059781"}


id: FYPO:0005559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are thicker than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"thick stable microtubule bundle","synonyms":[{"name":"increased stable microtubule bundle thickness","type":"exact"},{"name":"thick Q-MT bundles","type":"exact"},{"name":"thick quiescent cell MT bundle","type":"exact"},{"name":"thick quiescent cell microtubule bundle","type":"exact"},{"name":"thick stable microtubule array","type":"related"},{"name":"thick static microtubule bundle","type":"exact"}],"termid":"FYPO:0005559"}


id: FYPO:0003286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"decreased mitotic chromosome condensation","synonyms":[{"name":"decreased chromosome condensation during mitotic cell cycle","type":"related"},{"name":"decreased mitotic chromosome condensation during vegetative growth","type":"exact"},{"name":"reduced mitotic chromosome condensation","type":"exact"}],"termid":"FYPO:0003286"}


id: PBO:0049186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRHL2 divergent transcript","termid":"PBO:0049186"}


id: GO:0042598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular fraction (obsolete GO:0042598)","synonyms":[{"name":"vesicular fraction","type":"exact"}],"termid":"GO:0042598"}


id: PBO:0054923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2337","termid":"PBO:0054923"}


id: PBO:0076282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse defective Rho GTPase homolog 2","termid":"PBO:0076282"}


id: GO:0035206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemocyte proliferation. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"hemocyte proliferation","termid":"GO:0035172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemocyte proliferation","synonyms":[{"name":"regulation of arthropod blood cell proliferation","type":"exact"}],"termid":"GO:0035206"}


id: PBO:0004050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sgf29","termid":"PBO:0004050"}


id: GO:0031072
data:
  {"annotated_genes":["SJAG_03094","SJAG_00790","SJAG_03237","SJAG_00436","SJAG_00750","SJAG_00112","SJAG_03717","SJAG_01052","SJAG_04055","SJAG_01874","SJAG_00403","SJAG_03955","SJAG_01186","SJAG_04518","SJAG_01670","SJAG_01615","SJAG_03135","SJAG_01160","SJAG_03784","SJAG_01914"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64220,71673,72584,72670,73511,74064,74353,77760,82143],"is_not":false,"summary":null,"term":"GO:0031072"},{"annotations":[79694,67974,68265,59412,81598,81705,72632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030544"},{"annotations":[78477,79695,81599,76662,75771,78360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051879"}]},"cv_name":"molecular_function","definition":"Binding to a heat shock protein, a protein synthesized or activated in response to heat shock.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00403":null,"SJAG_00436":null,"SJAG_00750":null,"SJAG_00790":null,"SJAG_01052":null,"SJAG_01160":null,"SJAG_01186":null,"SJAG_01615":null,"SJAG_01670":null,"SJAG_01874":null,"SJAG_01914":null,"SJAG_03094":null,"SJAG_03135":null,"SJAG_03237":null,"SJAG_03717":null,"SJAG_03784":null,"SJAG_03955":null,"SJAG_04055":null,"SJAG_04518":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"heat shock protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0031072","terms_by_termid":{"GO:0030544":null,"GO:0031072":null,"GO:0051879":null}}


