# terms

id: MONDO:0010790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare mitochondrial oxidative phosphorylation disorder characterized by myoclonic seizures, ataxia, generalized epilepsy, muscle weakness and ragged red fibers in the muscle biopsy.","definition_xrefs":["Orphanet:551"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early myoclonic encephalopathy","termid":"MONDO:0016022"},{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"mitochondrial encephalomyopathy","termid":"MONDO:0004675"},{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0005066","MONDO:0004069","MONDO:0005027"],"is_obsolete":false,"name":"MERRF syndrome","secondary_identifiers":["MEDGEN:56486","MedDRA:10069825","GARD:7144","NCIT:C84889","DOID:310","MESH:D017243","ICD9:277.87","NORD:1441","OMIM:545000","NANDO:2200526","NANDO:1200177","SCTID:68448003","UMLS:C0162672","ICD10CM:E88.42"],"synonyms":[{"name":"Fukuhara syndrome","type":"exact"},{"name":"MERRF","type":"exact"},{"name":"MERRF syndrome","type":"exact"},{"name":"myoclonic epilepsy - ragged red fibers","type":"exact"},{"name":"myoclonic epilepsy - ragged red fibres","type":"exact"},{"name":"myoclonic epilepsy associated with ragged red fibers","type":"related"},{"name":"myoclonic epilepsy associated with ragged red fibres","type":"related"},{"name":"myoclonic epilepsy associated with ragged-RED fibers","type":"related"},{"name":"myoclonic epilepsy associated with ragged-RED fibres","type":"related"},{"name":"myoclonic epilepsy with ragged red fibers","type":"related"},{"name":"myoclonic epilepsy with ragged red fibres","type":"related"},{"name":"myoclonus epilepsy and ragged red fibers","type":"exact"},{"name":"myoclonus epilepsy and ragged red fibres","type":"exact"},{"name":"myoclonus epilepsy associated with ragged-red fibers","type":"exact"},{"name":"myoclonus epilepsy associated with ragged-red fibres","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibers","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibers (MERRF syndrome)","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibres","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibres (MERRF syndrome)","type":"exact"},{"name":"myoencephalopathy ragged-red fiber disease","type":"related"},{"name":"myoencephalopathy ragged-red fibre disease","type":"related"}],"termid":"MONDO:0010790","xrefs":{"Monarch":{"xref_id":"0010790"}}}


id: PBO:0110043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFB2M pseudogene 1","termid":"PBO:0110043"}


id: RO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has input","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in","termid":"RO:0000056"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"input_of","termid":"RO:0002352"}


id: MONDO:0003405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor of the central nervous system occurring in adults.","definition_xrefs":["NCIT:C6285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"},{"relation_name":"is_a","term_name":"adult germ cell tumor","termid":"MONDO:0044878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult central nervous system germ cell tumor","secondary_identifiers":["DOID:5349","MEDGEN:128893","UMLS:C0280796"],"synonyms":[{"name":"adult CNS germ cell neoplasm","type":"exact"},{"name":"adult CNS germ cell tumor","type":"exact"},{"name":"adult CNS germ cell tumour","type":"exact"},{"name":"adult central nervous system germ cell neoplasm","type":"exact"},{"name":"adult central nervous system germ cell tumor","type":"exact"},{"name":"central nervous system adult germ cell tumor","type":"related"},{"name":"central nervous system adult germ cell tumour","type":"related"},{"name":"central nervous system germ cell tumor","type":"broad"},{"name":"central nervous system germ cell tumor of adults","type":"exact"},{"name":"central nervous system germ cell tumour","type":"broad"},{"name":"central nervous system germ cell tumour of adults","type":"exact"},{"name":"germ cell neoplasm of adult CNS","type":"exact"},{"name":"germ cell neoplasm of adult central nervous system","type":"exact"},{"name":"germ cell neoplasm of the adult CNS","type":"exact"},{"name":"germ cell neoplasm of the adult central nervous system","type":"exact"},{"name":"germ cell tumor of adult CNS","type":"exact"},{"name":"germ cell tumor of adult central nervous system","type":"exact"},{"name":"germ cell tumor of the adult CNS","type":"exact"},{"name":"germ cell tumor of the adult central nervous system","type":"exact"},{"name":"germ cell tumour of adult CNS","type":"exact"},{"name":"germ cell tumour of adult central nervous system","type":"exact"},{"name":"germ cell tumour of the adult CNS","type":"exact"},{"name":"germ cell tumour of the adult central nervous system","type":"exact"}],"termid":"MONDO:0003405","xrefs":{"Monarch":{"xref_id":"0003405"}}}


id: PBO:0083868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein component of an SCF ubiquitin-ligase complex; modular substrate specificity factor which associates with core SCF (Cdc53p, Skp1p and Hrt1p/Rbx1p) to form the SCF(Grr1) complex; SCF(Grr1) acts as a ubiquitin-protein ligase directing ubiquitination of substrates such as: Gic2p, Mks1p, Mth1p, Cln1p, Cln2p and Cln3p; involved in carbon catabolite repression, glucose-dependent divalent cation transport, glucose transport, morphogenesis, and sulfite detoxification","termid":"PBO:0083868"}


id: MONDO:0005232
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant epithelial neoplasm composed of large, atypical cells.","definition_xrefs":["NCIT:C3780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"large cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0206704","MEDGEN:61665","DOID:4552","ICDO:8012/3","MESH:D018287"],"synonyms":[{"name":"carcinoma, large cell","type":"exact"},{"name":"large cell carcinoma","type":"exact"}],"termid":"MONDO:0005232","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0005232"}}}


id: PR:O74844
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta7 gene.","definition_xrefs":["UniProtKB:O74844","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.07","synonyms":[{"name":"Spom972h-fta7","type":"exact"},{"name":"sim4 complex subunit fta7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74844"}


id: GO:0050687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of antiviral mechanisms, thereby facilitating viral replication.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of defense response to virus","termid":"GO:0050688"},{"relation_name":"negatively_regulates","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response to virus","synonyms":[{"name":"down regulation of antiviral response","type":"exact"},{"name":"down-regulation of antiviral response","type":"exact"},{"name":"downregulation of antiviral response","type":"exact"},{"name":"inhibition of antiviral response","type":"narrow"},{"name":"negative regulation of antiviral response","type":"exact"}],"termid":"GO:0050687"}


id: MONDO:0000087
data:
  {"annotated_genes":["SJAG_04537","SJAG_02289","SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012986"},{"annotations":[87319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012399"},{"annotations":[89090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030669"},{"annotations":[86935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014679"},{"annotations":[87876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030482"}]},"cv_name":"mondo","definition":"A developmental brain abnormality characterized by an excessive amount of small convolutions on the surface of the brain and cognitive dysfunction.","definition_xrefs":["NCIT:C116936"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02289":null,"SJAG_04003":null,"SJAG_04537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"polymicrogyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:78605","MESH:D065706","SCTID:4945003","UMLS:C0266464","GARD:18818","icd11.foundation:2081858551","DOID:0080918","NANDO:1201071","Orphanet:35981"],"termid":"MONDO:0000087","terms_by_termid":{"MONDO:0012399":null,"MONDO:0012986":null,"MONDO:0014679":null,"MONDO:0030482":null,"MONDO:0030669":null},"xrefs":{"Monarch":{"xref_id":"0000087"}}}


id: PBO:0088864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly chaperone for ribosomal protein Rpl3, WD repeat protein Rrb1","termid":"PBO:0088864"}


id: PBO:0069555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 827, pseudogene","termid":"PBO:0069555"}


id: FYPO:0001605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered level of substance in cytosol","termid":"FYPO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of substance in cytosol","synonyms":[{"name":"decreased cytosolic level of substance","type":"exact"},{"name":"decreased level of substance in cytosol during mitotic cell cycle","type":"related"},{"name":"decreased level of substance in cytosol during vegetative growth","type":"exact"},{"name":"reduced level of substance in cytosol","type":"exact"}],"termid":"FYPO:0001605"}


id: PBO:0038754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 antisense RNA 1","termid":"PBO:0038754"}


id: PBO:0090136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein disulfide isomerase Pdi2","termid":"PBO:0090136"}


id: PBO:0048838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 3 like pseudogene 1","termid":"PBO:0048838"}


id: PBO:0065772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Q-nucleotide N-glycosylase 1","termid":"PBO:0065772"}


id: GO:1990488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, in absence of oxygen.","definition_xrefs":["GOC:mengo_curators","PMID:8561466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose catabolic process","termid":"GO:0030245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"anaerobic cellulose catabolic process","synonyms":[{"name":"anaerobic cellulose degradation","type":"exact"}],"termid":"GO:1990488"}


id: MONDO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A finding of an excessive amount of fat in the stool.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"steatorrhea","secondary_identifiers":["SCTID:27868004","NCIT:C86917","UMLS:C0038238","MESH:D045602","DOID:10602","HP:0002570","MEDGEN:20948"],"synonyms":[{"name":"fatty stool","type":"exact"},{"name":"fatty stool (finding)","type":"exact"},{"name":"steatorrhea","type":"exact"},{"name":"steatorrhea (disease)","type":"exact"}],"termid":"MONDO:0001075","xrefs":{"Monarch":{"xref_id":"0001075"}}}


id: PBO:0076949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFA intronic transcript 1","termid":"PBO:0076949"}


id: MONDO:0003696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete meningeal melanocytoma (obsolete MONDO:0003696)","termid":"MONDO:0003696","xrefs":{"Monarch":{"xref_id":"0003696"}}}


id: PBO:0048296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gigaxonin","termid":"PBO:0048296"}


id: SO:0001849
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core promoter element that has the consensus sequence ACCCTACCCT (or its inverted form AGGGTAGGGT), and is found near the homol D box in some promoters that use a homol D box instead of a canonical TATA sequence.","definition_xrefs":["PMID:7501449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homol_E_box","synonyms":[{"name":"homol E box","type":"exact"}],"termid":"SO:0001849"}


id: GO:0003782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete F-actin capping activity (obsolete GO:0003782)","synonyms":[{"name":"F-actin capping activity","type":"exact"}],"termid":"GO:0003782"}


id: PBO:0030387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cortex_morphology_during_nitrogen_starvation","termid":"PBO:0030387"}


id: PBO:0050445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein R pseudogene 3","termid":"PBO:0050445"}


id: SO:1000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000102 sequence_variant_affecting_level_of_translational_product (obsolete SO:1000102)","synonyms":[{"name":"mutation affecting level of translational product","type":"related"},{"name":"sequence variant affecting level of translational product","type":"exact"}],"termid":"SO:1000102"}


id: MONDO:0007789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophia musculorum vera","secondary_identifiers":["UMLS:C1840361","MEDGEN:374451","OMIM:145800","MESH:C564152"],"synonyms":[{"name":"hypertrophia musculorum vera","type":"exact"}],"termid":"MONDO:0007789","xrefs":{"Monarch":{"xref_id":"0007789"}}}


id: SO:0001447
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar amino acid encoded by the codons TGT and TGC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine","synonyms":[{"name":"C","type":"exact"},{"name":"Cys","type":"exact"}],"termid":"SO:0001447"}


id: PBO:0075583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 7","termid":"PBO:0075583"}


id: GO:0098623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: SeO3(2-) + 3 NADPH + 5H+ = H2Se +  3NADP+ + 3H2O.","definition_xrefs":["PMID:1321713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"selenite reductase (NADPH) activity","secondary_identifiers":["Reactome:R-HSA-2408558"],"synonyms":[{"name":"selenite reductase activity","type":"exact"}],"termid":"GO:0098623"}


id: GO:1905608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of presynapse assembly.","definition_xrefs":["GOC:PARL","PMID:25533483","GOC:bc","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of presynapse assembly","termid":"GO:1905606"},{"relation_name":"positively_regulates","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of presynapse assembly","synonyms":[{"name":"activation of presynapse assembly","type":"narrow"},{"name":"activation of presynapse biogenesis","type":"narrow"},{"name":"activation of presynaptic terminal assembly","type":"narrow"},{"name":"positive regulation of presynapse biogenesis","type":"exact"},{"name":"positive regulation of presynaptic terminal assembly","type":"exact"},{"name":"up regulation of presynapse assembly","type":"exact"},{"name":"up regulation of presynapse biogenesis","type":"exact"},{"name":"up regulation of presynaptic terminal assembly","type":"exact"},{"name":"up-regulation of presynapse assembly","type":"exact"},{"name":"up-regulation of presynapse biogenesis","type":"exact"},{"name":"up-regulation of presynaptic terminal assembly","type":"exact"},{"name":"upregulation of presynapse assembly","type":"exact"},{"name":"upregulation of presynapse biogenesis","type":"exact"},{"name":"upregulation of presynaptic terminal assembly","type":"exact"}],"termid":"GO:1905608"}


id: GO:0047261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: estradiol-17alpha 3-D-glucuronoside + UDP-N-acetyl-alpha-D-glucosamine = 17alpha-(N-acetyl-D-glucosaminyl)-estradiol 3-D-glucuronoside + H+ + UDP.","definition_xrefs":["EC:2.4.1.39","RHEA:14153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"steroid N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.39-RXN","KEGG_REACTION:R04451"],"synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:estradiol-17alpha-3-D-glucuronoside 17alpha-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"hydroxy steroid acetylglucosaminyltransferase activity","type":"related"},{"name":"steroid acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-steroid acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047261"}


id: PBO:0065097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type I regulatory subunit alpha","termid":"PBO:0065097"}


id: PBO:0040984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 2","termid":"PBO:0040984"}


id: GO:0034983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acetyl group from an acetylated lysine residue in a peptide or protein.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacetylation","termid":"GO:0006476"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine deacetylation","synonyms":[{"name":"protein lysine acetylation","type":"related"}],"termid":"GO:0034983"}


id: PBO:0045858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 48","termid":"PBO:0045858"}


id: GO:0071002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains the extensively base paired small nuclear RNAs U4atac and U6atac, a heptameric ring of Sm proteins associated with U4atac, the Lsm2-8 heptameric ring complex associated with U6atac, as well as several proteins that are unique to the U4atac snRNP or U6atac snRNPs, some of which remain associated with the U4atac/U6atac snRNA both while the U4atac snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["PMID:14685174","GOC:mah","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U4atac/U6atac snRNP","termid":"GO:0071002"}


id: MONDO:0018210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alexander disease type II (AxD type II) is an astrogliopathy and a form of Alexander disease (AxD) characterized by ataxia, bulbar symptoms, spastic paraparesis, palatal myoclonus, and autonomic symptoms.","definition_xrefs":["Orphanet:363722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alexander disease","termid":"MONDO:0008752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Alexander disease type II","secondary_identifiers":["MEDGEN:1842714","NANDO:1200556","UMLS:C5679914","GARD:17573"],"synonyms":[{"name":"AxD type II","type":"exact"}],"termid":"MONDO:0018210","xrefs":{"Monarch":{"xref_id":"0018210"}}}


id: PBO:0056259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial assembly of ribosomal large subunit 1","termid":"PBO:0056259"}


id: MONDO:0031632
data:
  {"annotated_genes":["SJAG_01058","SJAG_04085"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800438"},{"annotations":[87598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100217"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01058":null,"SJAG_04085":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay with short stature, dysmorphic facial features, and sparse hair","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310801","OMIMPS:616901","DOID:0070476","MEDGEN:934768"],"termid":"MONDO:0031632","terms_by_termid":{"MONDO:0100217":null,"MONDO:0800438":null},"xrefs":{"Monarch":{"xref_id":"0031632"}}}


id: PBO:0084741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein of unknown function","termid":"PBO:0084741"}


id: PBO:0089386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane anchored oxidoreductase Aif1","termid":"PBO:0089386"}


id: GO:0034829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxydec-2,4-diene-1,10-dioate + H2O = (2Z)-2,4-dihydroxydec-2-enedioate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxydec-2,4-diene-1,10-dioate hydratase activity (obsolete GO:0034829)","termid":"GO:0034829"}


id: MONDO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tracheal agenesis (TA) is a rare congenital malformation in which the trachea may be completely absent (agenesis), or partially in place but underdeveloped (atresia). In both cases, proximal-distal communication between the larynx and the alveoli of the lungs is lacking.","definition_xrefs":["Orphanet:3346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tracheal agenesis","secondary_identifiers":["GARD:5233","SCTID:3987009","UMLS:C1261567","MESH:C536975","NCIT:C35376","MEDGEN:266059"],"synonyms":[{"name":"congenital absence of trachea","type":"exact"},{"name":"congenital tracheal agenesis","type":"related"},{"name":"tracheal absence","type":"exact"}],"termid":"MONDO:0018058","xrefs":{"Monarch":{"xref_id":"0018058"}}}


id: MONDO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the ovary. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian sarcoma","termid":"MONDO:0002225"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovary leiomyosarcoma","secondary_identifiers":["EFO:0006718","UMLS:C1335163","DOID:5263","MEDGEN:233275"],"synonyms":[{"name":"leiomyosarcoma of ovary","type":"exact"},{"name":"leiomyosarcoma of the ovary","type":"exact"},{"name":"ovarian leiomyosarcoma","type":"exact"},{"name":"ovary leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003355","xrefs":{"Monarch":{"xref_id":"0003355"}}}


id: PBO:0063501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase catalytic subunit 2","termid":"PBO:0063501"}


id: MONDO:0800370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"},{"relation_name":"is_a","term_name":"ACD-related short telomere syndrome","termid":"MONDO:0100569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0019303"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 7","secondary_identifiers":["MEDGEN:903803","UMLS:C4225283"],"synonyms":[{"name":"DKCB7","type":"exact"}],"termid":"MONDO:0800370","xrefs":{"Monarch":{"xref_id":"0800370"}}}


id: GO:0050469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + H2O = diphosphate + sabinene hydrate.","definition_xrefs":["RHEA:19565","EC:4.2.3.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sabinene-hydrate synthase activity","secondary_identifiers":["MetaCyc:4.2.3.11-RXN","KEGG_REACTION:R02006"],"synonyms":[{"name":"geranyl-diphosphate diphosphate-lyase (cyclizing, sabinene-hydrate-forming)","type":"related"},{"name":"sabinene hydrate cyclase activity","type":"related"}],"termid":"GO:0050469"}


id: MONDO:0017490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tibial hemimelia","termid":"MONDO:0010144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibial hemimelia, unilateral","secondary_identifiers":["Orphanet:295077","icd11.foundation:863808263"],"synonyms":[{"name":"tibial longitudinal meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017490","xrefs":{"Monarch":{"xref_id":"0017490"}}}


id: GO:0008071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the ovarian follicle cells along the dorsal-ventral axis by a gene product encoded by somatic cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral axis specification, ovarian follicular epithelium","termid":"GO:0008069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"maternal determination of dorsal/ventral axis, ovarian follicular epithelium, soma encoded","synonyms":[{"name":"maternal determination of dorsal-ventral axis, ovarian follicular epithelium, soma encoded","type":"exact"},{"name":"maternal determination of dorsal/ventral axis, follicular epithelium, soma encoded","type":"broad"},{"name":"maternal determination of dorsoventral axis, ovarian follicular epithelium, soma encoded","type":"exact"}],"termid":"GO:0008071"}


id: PBO:0068467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 44, pseudogene","termid":"PBO:0068467"}


id: PBO:0091952
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SRP54","termid":"PBO:0091952"}


id: GO:1900404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of DNA repair.","definition_xrefs":["GOC:TermGenie","GOC:mah","PMID:20299455"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900404)","synonyms":[{"name":"activation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900404"}


id: GO:0032125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the micronucleus.","definition_xrefs":["GOC:jl","GOC:mah","PMID:10503190","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"micronucleus organization","synonyms":[{"name":"micronuclear organization","type":"exact"},{"name":"micronuclear organization and biogenesis","type":"related"},{"name":"micronucleus organisation","type":"exact"}],"termid":"GO:0032125"}


id: PBO:0045847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 37","termid":"PBO:0045847"}


id: GO:0044572
data:
  {"annotated_genes":["SJAG_00455","SJAG_02306","SJAG_00972","SJAG_03701","SJAG_01417","SJAG_04016","SJAG_02994"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90053,94639,100831,103527,111219,111834,119867],"is_not":false,"summary":null,"term":"GO:0044572"}]},"cv_name":"biological_process","definition":"The incorporation of four iron atoms and four sulfur atoms into an iron-sulfur cluster.","definition_xrefs":["GOC:vw","GOC:mengo_curators","GOC:pde","PMID:15952888","GOC:jl","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00455":null,"SJAG_00972":null,"SJAG_01417":null,"SJAG_02306":null,"SJAG_02994":null,"SJAG_03701":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0016226"],"is_obsolete":false,"name":"[4Fe-4S] cluster assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"4Fe-4S cluster assembly","type":"exact"},{"name":"[4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:0044572","terms_by_termid":{"GO:0044572":null}}


id: PBO:0061807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dense fiber of sperm tails 4","termid":"PBO:0061807"}


id: GO:0060832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the animal/vegetal axis in the oocyte. The animal/vegetal axis of an oocyte is defined by the placement of the nucleus in the oocyte and can sometimes be identified by the asymmetric placement of other substances such as yolk in the oocyte. The pole of the egg that is closest to the nucleus defines the animal end, with the axis passing through the nucleus.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte axis specification","termid":"GO:0007309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte animal/vegetal axis specification","termid":"GO:0060832"}


id: GO:0033574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to testosterone","synonyms":[{"name":"response to testosterone stimulus","type":"exact"}],"termid":"GO:0033574"}


id: SO:0000650
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic SSU rRNA is an RNA component of the small subunit of cytosolic ribosomes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_small_subunit_primary_transcript","termid":"SO:0000255"},{"relation_name":"is_a","term_name":"cytosolic_rRNA","termid":"SO:0002343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_SSU_rRNA","synonyms":[{"name":"cytosolic SSU rRNA","type":"exact"},{"name":"cytosolic SSU ribosomal RNA","type":"exact"},{"name":"cytosolic small subunit rRNA","type":"exact"}],"termid":"SO:0000650"}


id: PBO:0041323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2orf74 antisense RNA 1","termid":"PBO:0041323"}


id: MONDO:0957467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary genito-urinary tuberculosis","secondary_identifiers":["Orphanet:645874"],"termid":"MONDO:0957467","xrefs":{"Monarch":{"xref_id":"0957467"}}}


id: GO:0102741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,7-dimethylxanthine + S-adenosyl-L-methionine = H+ + caffeine + S-adenosyl-L-homocysteine. Also converts theobromine to caffeine and 7-methylxanthine to theobromine.","definition_xrefs":["EC:2.1.1.160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"caffeine synthase activity","synonyms":[{"name":"3N-methyltransferase activity","type":"related"},{"name":"dimethylxanthine methyltransferase activity","type":"related"},{"name":"paraxanthine:S-adenosyl-L-methionine 3-N-methyltransferase activity","type":"narrow"},{"name":"theobromine:S-adenosyl-L-methionine 1-N-methyltransferase activity","type":"narrow"}],"termid":"GO:0102741"}


id: PBO:0057022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR122 host gene","termid":"PBO:0057022"}


id: PR:O13706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hpz2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARP-type zinc finger-containing protein C13F5.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.07c","synonyms":[{"name":"Spom972h-hpz2","type":"exact"}],"termid":"PR:O13706"}


id: MONDO:0004515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete olfactory neural tumor (obsolete MONDO:0004515)","termid":"MONDO:0004515","xrefs":{"Monarch":{"xref_id":"0004515"}}}


id: GO:0047051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + 2 [Fe(III)cytochrome c553] = 2 [Fe(II)cytochrome c553] + 2 H+ + pyruvate.","definition_xrefs":["RHEA:16465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-lactate dehydrogenase (cytochrome c-553) activity","secondary_identifiers":["EC:1.1.2.5","MetaCyc:1.1.2.5-RXN"],"synonyms":[{"name":"(R)-lactate:ferricytochrome-c-553 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047051"}


id: MONDO:0003691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymoma occurring in children.","definition_xrefs":["NCIT:C8097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesenchymoma","termid":"MONDO:0003633"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood malignant mesenchymoma","secondary_identifiers":["UMLS:C0279991","MEDGEN:124688","DOID:5893"],"synonyms":[{"name":"childhood malignant mesenchymoma","type":"exact"},{"name":"malignant mesenchymoma","type":"broad"},{"name":"malignant mesenchymoma of childhood","type":"exact"},{"name":"paediatric malignant mesenchymoma","type":"exact"},{"name":"pediatric malignant mesenchymoma","type":"exact"}],"termid":"MONDO:0003691","xrefs":{"Monarch":{"xref_id":"0003691"}}}


id: PBO:0036242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex (poly(A)-specific ribonuclease) ubiquitin C-terminal hydrolase subunit Pan2 (predicted)","termid":"PBO:0036242"}


id: PBO:0003946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase Pyr1","termid":"PBO:0003946"}


id: GO:0035904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the aorta over time, from its initial formation to the mature structure. An aorta is an artery that carries blood from the heart to other parts of the body.","definition_xrefs":["Wikipedia:Aorta","GOC:dgh","MA:0000062","GOC:bf","UBERON:0000947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery development","termid":"GO:0060840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aorta development","termid":"GO:0035904"}


id: PBO:0003797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Hhp1","termid":"PBO:0003797"}


id: GO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction","termid":"GO:0002507"}


id: PBO:0066199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17","termid":"PBO:0066199"}


id: PBO:0052225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 3","termid":"PBO:0052225"}


id: GO:0075098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont signal transduction mediated by G-protein gamma subunit (obsolete GO:0075098)","termid":"GO:0075098"}


id: GO:0003884
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82183],"is_not":false,"summary":null,"term":"GO:0003884"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-alpha-amino acid + H2O + O2 = a 2-oxocarboxylate + H2O2 + NH4+.","definition_xrefs":["RHEA:21816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary methylamine oxidase activity","termid":"GO:0008131"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-amino-acid oxidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-389821","EC:1.4.3.3","MetaCyc:D-AMINO-ACID-OXIDASE-RXN"],"synonyms":[{"name":"D-amino-acid:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"L-amino acid:O2 oxidoreductase activity","type":"related"},{"name":"new yellow enzyme","type":"related"}],"termid":"GO:0003884","terms_by_termid":{"GO:0003884":null}}


id: GO:0002228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The promotion of an immune response by natural killer cells through direct recognition of target cells or through the release of cytokines.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell mediated immunity","synonyms":[{"name":"NK cell mediated immunity","type":"exact"}],"termid":"GO:0002228"}


id: MONDO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of uterine corpus leiomyoma characterized by the presence of scattered islands of mature adipocytes within the smooth muscle neoplasm.","definition_xrefs":["NCIT:C40168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus lipoleiomyoma","secondary_identifiers":["MEDGEN:311424","UMLS:C1519856","DOID:13957"],"synonyms":[{"name":"uterine corpus lipomatous leiomyoma","type":"exact"}],"termid":"MONDO:0001845","xrefs":{"Monarch":{"xref_id":"0001845"}}}


id: MOD:02044
data:
  {"annotated_genes":["SJAG_04125","SJAG_01970","SJAG_04789","SJAG_01626","SJAG_04953","SJAG_04067","SJAG_00784","SJAG_02827","SJAG_00288","SJAG_02694","SJAG_03032","SJAG_00254","SJAG_00109","SJAG_01029","SJAG_00096","SJAG_02489","SJAG_02388","SJAG_04553","SJAG_03290","SJAG_02260","SJAG_02435","SJAG_01162","SJAG_02504","SJAG_04238"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82408,82332,82525,82463,82550,82585,82304,82367,82346,82392,82295,82584,82355,82526,82551,82447,82353,82492,82302,82576,82361,82354,82465,82549,82394,82360,82287,82464,82552,82493,82543,82306,82582,82393,82583,82494,82578,82377,82440,82446,82445,82500,82577,82433,82333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00689"}]},"cv_name":"PSI-MOD","definition":"A protein modification that contains an L-cysteine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00288":null,"SJAG_00784":null,"SJAG_01029":null,"SJAG_01162":null,"SJAG_01626":null,"SJAG_01970":null,"SJAG_02260":null,"SJAG_02388":null,"SJAG_02435":null,"SJAG_02489":null,"SJAG_02504":null,"SJAG_02694":null,"SJAG_02827":null,"SJAG_03032":null,"SJAG_03290":null,"SJAG_04067":null,"SJAG_04125":null,"SJAG_04238":null,"SJAG_04553":null,"SJAG_04789":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"crosslinked L-cysteine residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"XlnkCys","type":"exact"}],"termid":"MOD:02044","terms_by_termid":{"MOD:00689":null}}


id: PBO:0053110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCMT1 antisense RNA 1","termid":"PBO:0053110"}


id: PBO:0088971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Fcp1","termid":"PBO:0088971"}


id: MONDO:0016997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary epidermolysis bullosa associated with ocular features (obsolete MONDO:0016997)","secondary_identifiers":["Orphanet:263676"],"termid":"MONDO:0016997","xrefs":{"Monarch":{"xref_id":"0016997"}}}


id: PBO:0090629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho4","termid":"PBO:0090629"}


id: MONDO:0018123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-obesity-brain malformations-facial dysmorphism syndrome is a rare, syndromic intellectual disability primarily characterized by moderate to severe intellectual disability, true-to-relative microcephaly and brain abnormalities including a thin corpus callosum, cerebellar hypoplasia, cerebral white matter hypoplasia and multi-focal hyperintensity of cerebral white matter on MRI. Obesity and distinctive craniofacial dysmorphism (including brachycephaly, round face, straight eyebrows, synophrys, hypertelorism, epicanthus, wide and depressed nasal bridge, protruding ears with uplifted lobe, downslanting corners of the mouth) are additional features.","definition_xrefs":["Orphanet:352530"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-obesity-brain malformations-facial dysmorphism syndrome","secondary_identifiers":["UMLS:C4706414","GARD:21521","MEDGEN:1644787"],"synonyms":[{"name":"autosomal recessive intellectual disability due to TRAPPC9 deficiency","type":"exact"},{"name":"intellectual disability-obesity-brain malformations-facial dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0018123","xrefs":{"Monarch":{"xref_id":"0018123"}}}


id: PBO:0073962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 11","termid":"PBO:0073962"}


id: PBO:0078544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 36","termid":"PBO:0078544"}


id: MONDO:0018830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kimura disease is a benign and chronic inflammatory disorder of unknown etiology, occurring mainly in Asian countries (very rarely in Western countries) and predominantly affecting young men, that usually presents with a solitary or multiple non-tender subcutaneous masses in the head and neck region (in particular the preauricular and submandibular area) and/or generalized painless lymphadenopathy, often with salivary gland involvement. Characteristic laboratory findings include blood eosinophilia and markedly elevated serum immunoglobulin E (IgE) levels. It is often associated with autoinflammatory disorders (i.e. ulcerative colitis, bronchial asthma) and a co-existing renal disease.","definition_xrefs":["Orphanet:482"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Kimura disease","secondary_identifiers":["DOID:7365","GARD:6835","icd11.foundation:1229046951","MedDRA:10048640","MEDGEN:46183","MESH:D000082242","NCIT:C26867","UMLS:C0033838","Wikipedia:Kimura's_disease","EFO:1000722","MESH:D000796"],"synonyms":[{"name":"Kimura's disease","type":"exact"},{"name":"angiolymphoid hyperplasia with eosinophilia","type":"related"},{"name":"eosinophilic granuloma of soft tissue","type":"related"},{"name":"eosinophilic hyperplastic lymphogranuloma","type":"related"},{"name":"eosinophilic lymphofollicular granuloma","type":"related"},{"name":"eosinophilic lymphofolliculosis","type":"related"},{"name":"eosinophilic lymphogranuloma","type":"exact"}],"termid":"MONDO:0018830","xrefs":{"Monarch":{"xref_id":"0018830"}}}


id: PBO:0086398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative dihydrofolate synthetase; similar to E. coli folylpolyglutamate synthetase/dihydrofolate synthetase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; RMA1 has a paralog, FOL3, that arose from the whole genome duplication","termid":"PBO:0086398"}


id: GO:0003787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete actin depolymerizing activity (obsolete GO:0003787)","synonyms":[{"name":"actin depolymerizing activity","type":"exact"}],"termid":"GO:0003787"}


id: MONDO:0100135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dravet syndrome is a channelopathy with epilepsy of with onset during the first year of life, typically 4-5 months, characterized by status epilepticus and a variety of drug-resistant seizures often induced by fever, presenting in previously healthy children, and which frequently leads to cognitive and motor impairment. Dravet differs from other channelopathies usually due to a mutation in SCN1A.","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"neonatal/infantile-onset epilepsy syndrome with developmental and epileptic encephalopathy","termid":"MONDO:0800490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"Dravet syndrome","secondary_identifiers":["SCTID:230437002","GARD:10430","ICD9:345.10","NANDO:2200877","NCIT:C116573","NANDO:1200587","UMLS:C0751122","DOID:0060171","MEDGEN:148243","NORD:1061","icd11.foundation:1255654700","DOID:0080422"],"synonyms":[{"name":"DS","type":"exact"},{"name":"Dravet","type":"exact"},{"name":"Dravet syndrome","type":"exact"},{"name":"SME","type":"exact"},{"name":"SMEB","type":"exact"},{"name":"myoclonic epilepsy, severe, of infancy","type":"exact"},{"name":"severe myoclonic epilepsy of infancy","type":"exact"}],"termid":"MONDO:0100135","xrefs":{"Monarch":{"xref_id":"0100135"}}}


id: GO:1901971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA-5-methylcytosine glycosylase activity.","definition_xrefs":["PMID:23316050","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-5-methylcytosine glycosylase activity (obsolete GO:1901971)","termid":"GO:1901971"}


id: MONDO:0012599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 8","secondary_identifiers":["MEDGEN:369687","OMIM:611014","UMLS:C1970244"],"synonyms":[{"name":"HYT8","type":"exact"},{"name":"hypertension, essential, susceptibility to, 8","type":"exact"}],"termid":"MONDO:0012599","xrefs":{"Monarch":{"xref_id":"0012599"}}}


id: GO:0051321
data:
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cycle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0007126","Wikipedia:Meiosis"],"synonyms":[{"name":"meiosis","type":"related"}],"termid":"GO:0051321","terms_by_termid":{"GO:0000212":null,"GO:0000706":null,"GO:0000707":null,"GO:0000708":null,"GO:0000709":null,"GO:0000710":null,"GO:0000712":null,"GO:0006279":null,"GO:0006311":null,"GO:0007127":null,"GO:0007129":null,"GO:0007131":null,"GO:0007135":null,"GO:0010032":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0030437":null,"GO:0030476":null,"GO:0030989":null,"GO:0030999":null,"GO:0031321":null,"GO:0031322":null,"GO:0031619":null,"GO:0032118":null,"GO:0032120":null,"GO:0032121":null,"GO:0033315":null,"GO:0033316":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0040020":null,"GO:0042138":null,"GO:0044778":null,"GO:0044821":null,"GO:0045128":null,"GO:0045141":null,"GO:0045143":null,"GO:0045144":null,"GO:0051232":null,"GO:0051307":null,"GO:0051321":null,"GO:0051445":null,"GO:0051446":null,"GO:0051447":null,"GO:0051455":null,"GO:0051456":null,"GO:0051598":null,"GO:0051728":null,"GO:0051755":null,"GO:0061982":null,"GO:0062209":null,"GO:0070197":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:0090306":null,"GO:0110031":null,"GO:0110032":null,"GO:0110044":null,"GO:0110045":null,"GO:0140013":null,"GO:0140456":null,"GO:0140642":null,"GO:0140648":null,"GO:1902103":null,"GO:1902346":null,"GO:1902441":null,"GO:1903024":null,"GO:1904514":null,"GO:1904967":null,"GO:1905191":null,"GO:1905263":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990395":null,"GO:1990571":null,"GO:1990813":null,"GO:1990918":null,"GO:1990946":null,"GO:1990949":null,"GO:1990950":null}}


id: PBO:0076315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNM antisense RNA 1","termid":"PBO:0076315"}


id: PBO:0079286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 5","termid":"PBO:0079286"}


id: PBO:0030648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_effect_on_growth_medium","termid":"PBO:0030648"}


id: PBO:0040896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 2","termid":"PBO:0040896"}


id: FYPO:0003185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to microtubule cytoskeleton during mitotic interphase","synonyms":[{"name":"normal protein localisation to microtubule cytoskeleton during mitotic interphase","type":"exact"},{"name":"normal protein localization to microtubule cytoskeleton during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0003185"}


id: PR:O14246
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tpz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protection of telomeres protein tpz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.16c","synonyms":[{"name":"Spom972h-tpz1","type":"exact"},{"name":"meiotically up-regulated gene 169 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14246"}


id: GO:0060892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an limb basal epidermal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal cell fate specification","termid":"GO:0009957"},{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"limb epidermis stratification","termid":"GO:0060888"},{"relation_name":"part_of","term_name":"limb basal epidermal cell differentiation","termid":"GO:0060889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb basal epidermal cell fate specification","termid":"GO:0060892"}


id: PBO:0044671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damage specific DNA binding protein 2","termid":"PBO:0044671"}


id: PBO:0075325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 3","termid":"PBO:0075325"}


id: GO:0033198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ATP","synonyms":[{"name":"response to adenosine 5'-triphosphate","type":"exact"},{"name":"response to adenosine triphosphate","type":"exact"}],"termid":"GO:0033198"}


id: PR:Q09672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-methyl-2-oxobutanoate hydroxymethyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoate hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.09c","secondary_identifiers":["UniProtKB:Q09672"],"synonyms":[{"name":"Spom972h-panB","type":"exact"},{"name":"ketopantoate hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09672"}


id: GO:0051110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uridylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-uridine)-L-histidine (otherwise known as tau-UMP-histidine, tele-UMP-histidine).","definition_xrefs":["RESID:AA0372"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-histidine uridylylation, to form peptidyl-1'-(phospho-5'-uridine)-L-histidine (obsolete GO:0051110)","termid":"GO:0051110"}


id: PBO:0018275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVE domain (PUA-related) protein","termid":"PBO:0018275"}


id: MONDO:0023188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Freiberg's disease is rare condition that primarily affects the second or third metatarsal (the long bones of the foot). Although people of all ages can be affected by this condition, Freiberg's disease is most commonly diagnosed during adolescence through the second decade of life. Common signs and symptoms include pain and stiffness in the front of the foot, which often leads to a limp. Affected people may also experience swelling, limited range of motion, and tenderness of the affected foot. Symptoms are generally triggered by weight-bearing activities, including walking. The exact underlying cause of Freiberg's disease is currently unknown. Treatment depends on many factors, including the severity of condition; the signs and symptoms present; and the age of the patient.","definition_xrefs":["GARD:0002380"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteochondritis of tarsal/metatarsal bone","termid":"MONDO:0016086"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Freiberg disease","secondary_identifiers":["SCTID:28466007","GARD:2380","MESH:C535636","MEDGEN:75532","Orphanet:564003","icd11.foundation:74359553","UMLS:C0264099"],"synonyms":[{"name":"Freiberg's disease","type":"exact"},{"name":"Freiberg's infraction","type":"related"},{"name":"Freiberg-Kohler syndrome","type":"related"},{"name":"Kohler's second disease","type":"related"},{"name":"Osteochondrosis of the metatarsal head, usually the second","type":"related"},{"name":"second metatarsal osteochondrosis","type":"related"}],"termid":"MONDO:0023188","xrefs":{"Monarch":{"xref_id":"0023188"}}}


id: PBO:0005420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex subunit Rec11","termid":"PBO:0005420"}


id: PBO:0065424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 9","termid":"PBO:0065424"}


id: GO:0001962
data:
  {"annotated_genes":["SJAG_03149","SJAG_03150"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112684,112690],"is_not":false,"summary":null,"term":"GO:0001962"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose residue from a donor molecule, such as GDP-galactose or UDP-galactose, to an oligosaccharide, forming an alpha-(1->3) linkage.","definition_xrefs":["PMID:10854427","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isoglobotriaosylceramide synthase","type":"narrow"}],"termid":"GO:0001962","terms_by_termid":{"GO:0001962":null}}


id: GO:0141128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont superantigen elicits a strong immune response by activating a large number of T cells in a non-specific manner. Unlike conventional antigens, which activate T cells by interacting with specific receptors on the surface of these cells, superantigens can stimulate T cells by binding to regions outside the antigen-binding site. Superantigens can activate a large proportion of T cells, leading to an exaggerated immune response. This excessive activation can result in the release of a large amount of cytokines such as tumor necrosis factor and interleukin-2. The massive cytokine release can lead to an acute toxic shock, causing symptoms such as fever and organ damage.","definition_xrefs":["PMID:28880920","PMID:12679262","PMID:17427250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated non-specific activation of host T-cells","synonyms":[{"name":"symbiont-mediated non-specific T-cell activation in host","type":"exact"},{"name":"symbiont-mediated nonspecific activation of host T-cells","type":"exact"}],"termid":"GO:0141128"}


id: MONDO:0007977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesomelic dysplasia Kantaputra type (MDK) is a rare skeletal disease characterized by symmetric shortening of the middle segments of limbs and short stature.","definition_xrefs":["Orphanet:1836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesomelic dysplasia","termid":"MONDO:0023599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mesomelic dysplasia, Kantaputra type","secondary_identifiers":["MEDGEN:331880","MESH:C535547","OMIM:156232","SCTID:719397009","UMLS:C1835009","GARD:3074"],"synonyms":[{"name":"Kantaputra mesomelic dysplasia","type":"exact"},{"name":"MDK","type":"exact"},{"name":"MMDK","type":"related"},{"name":"Mdk","type":"related"},{"name":"mesomelic dysplasia Kantaputra type","type":"related"},{"name":"mesomelic dysplasia Thai type","type":"related"},{"name":"mesomelic dysplasia with ankle carpal and tarsal synostosis","type":"related"},{"name":"mesomelic dysplasia with ankle, carpal, and tarsal synostosis","type":"related"},{"name":"mesomelic dysplasia, Kantaputra type","type":"exact"},{"name":"mesomelic dysplasia, Thai type","type":"exact"}],"termid":"MONDO:0007977","xrefs":{"Monarch":{"xref_id":"0007977"}}}


id: FYPO:0006626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in the plasma membrane is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"},{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"},{"relation_name":"is_a","term_name":"altered level of substance in plasma membrane","termid":"FYPO:0008331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased phosphatidylinositol-4,5-bisphosphate level in plasma membrane","synonyms":[{"name":"increased 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate level in plasma membrane","type":"exact"},{"name":"increased phosphatidylinositol-4,5-bisphosphate level in cell membrane","type":"exact"},{"name":"increased phosphatidylinositol-4,5-bisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"increased phosphatidylinositol-4,5-bisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"increased plasma membrane PI(4,5)P2 level","type":"exact"},{"name":"increased plasma membrane phosphatidylinositol-4,5-bisphosphate level","type":"exact"}],"termid":"FYPO:0006626"}


id: PBO:0044666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCXR divergent transcript","termid":"PBO:0044666"}


id: GO:0045861
data:
  {"annotated_genes":["SJAG_02244","SJAG_01528","SJAG_00475","SJAG_00052","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[79331,79854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[108898,79114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_01528":null,"SJAG_02244":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteolysis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteolysis","type":"exact"},{"name":"down-regulation of proteolysis","type":"exact"},{"name":"downregulation of proteolysis","type":"exact"},{"name":"inhibition of proteolysis","type":"narrow"},{"name":"negative regulation of peptidolysis","type":"exact"}],"termid":"GO:0045861","terms_by_termid":{"GO:0032435":null,"GO:1904293":null,"GO:1905785":null}}


id: GO:1901862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of muscle tissue development.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:23150719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"negatively_regulates","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle tissue development","synonyms":[{"name":"down regulation of muscle tissue development","type":"exact"},{"name":"down-regulation of muscle tissue development","type":"exact"},{"name":"downregulation of muscle tissue development","type":"exact"},{"name":"inhibition of muscle tissue development","type":"narrow"}],"termid":"GO:1901862"}


id: MONDO:0011437
data:
  {"annotated_genes":["SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87095],"is_not":false,"summary":null,"term":"MONDO:0011437"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 4, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070291","GARD:15367","MESH:C565792","MEDGEN:347655","OMIM:604321","UMLS:C1858516"],"synonyms":[{"name":"MCPH4","type":"related"},{"name":"microcephaly 4, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0011437","terms_by_termid":{"MONDO:0011437":null},"xrefs":{"Monarch":{"xref_id":"0011437"}}}


id: GO:2000285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of regulation of excitatory postsynaptic membrane potential.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of regulation of excitatory postsynaptic membrane potential (obsolete GO:2000285)","synonyms":[{"name":"negative regulation of EPSP","type":"related"},{"name":"negative regulation of regulation of excitatory postsynaptic membrane potential","type":"exact"}],"termid":"GO:2000285"}


id: MOD:00687
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and either an alkyl C as in lanthionine, or an aryl C as 2'-(S-cysteinyl)-L-histidine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"thioether crosslinked residues","termid":"MOD:00687"}


id: GO:0031550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling via the brain-derived neurotrophic factor receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031548"},{"relation_name":"positively_regulates","term_name":"brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of brain-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"activation of brain-derived neurotrophic factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of BDNF receptor signaling pathway","type":"exact"},{"name":"positive regulation of BDNF receptor signalling pathway","type":"exact"},{"name":"positive regulation of brain-derived neurotrophic factor receptor signalling pathway","type":"exact"},{"name":"stimulation of brain-derived neurotrophic factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"upregulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"}],"termid":"GO:0031550"}


id: PBO:0063995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 29","termid":"PBO:0063995"}


id: PBO:0079195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 24, pseudogene","termid":"PBO:0079195"}


id: MONDO:0004082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immature teratoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood teratoma of the ovary","termid":"MONDO:0003819"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"},{"relation_name":"is_a","term_name":"immature ovarian teratoma","termid":"MONDO:0018369"},{"relation_name":"is_a","term_name":"childhood gonadal germ cell tumor","termid":"MONDO:0020577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood immature teratoma of ovary","secondary_identifiers":["UMLS:C1332990","DOID:7037","MEDGEN:232353","NCIT:C6547"],"synonyms":[{"name":"childhood immature ovarian teratoma","type":"exact"},{"name":"childhood immature teratoma of the ovary","type":"exact"},{"name":"childhood ovarian immature teratoma","type":"exact"},{"name":"immature ovarian teratoma of childhood","type":"exact"},{"name":"paediatric immature ovarian teratoma","type":"exact"},{"name":"paediatric immature teratoma of ovary","type":"exact"},{"name":"paediatric immature teratoma of the ovary","type":"exact"},{"name":"paediatric ovarian immature teratoma","type":"exact"},{"name":"pediatric immature ovarian teratoma","type":"exact"},{"name":"pediatric immature teratoma of ovary","type":"exact"},{"name":"pediatric immature teratoma of the ovary","type":"exact"},{"name":"pediatric ovarian immature teratoma","type":"exact"}],"termid":"MONDO:0004082","xrefs":{"Monarch":{"xref_id":"0004082"}}}


id: PBO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ste11","termid":"PBO:0000896"}


id: MONDO:0030524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis","termid":"MONDO:0019249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561"],"is_obsolete":false,"name":"mucopolysaccharidosis, type 10","secondary_identifiers":["Orphanet:662216","UMLS:C5562064","MEDGEN:1794274","OMIM:619698"],"synonyms":[{"name":"MPS10","type":"exact"}],"termid":"MONDO:0030524","xrefs":{"Monarch":{"xref_id":"0030524"}}}


id: PBO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S24 (predicted)","termid":"PBO:0002132"}


id: GO:0046554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + NADP+ = oxaloacetate + NADPH + H+.","definition_xrefs":["RHEA:10824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-malate dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R00343","MetaCyc:MALATE-DEHYDROGENASE-NADP+-RXN","EC:1.1.1.82"],"synonyms":[{"name":"(S)-malate:NADP+ oxidoreductase activity","type":"related"},{"name":"NADP malate dehydrogenase activity","type":"related"},{"name":"NADP-linked malate dehydrogenase activity","type":"related"},{"name":"NADP-malate dehydrogenase activity","type":"related"},{"name":"malate NADP dehydrogenase activity","type":"related"},{"name":"malic dehydrogenase (nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0046554"}


id: MONDO:1010261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrotic syndrome, non-human animal","secondary_identifiers":["OMIA:000712"],"termid":"MONDO:1010261","xrefs":{"Monarch":{"xref_id":"1010261"}}}


id: PBO:0061761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase like","termid":"PBO:0061761"}


id: PBO:0001499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome regulatory particle, gankyrin (predicted)","termid":"PBO:0001499"}


id: PBO:0003884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carboxylic acid transporter (predicted)","termid":"PBO:0003884"}


id: PBO:0026875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_DNA_double-strand_break_clipping","termid":"PBO:0026875"}


id: PBO:0040201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 14","termid":"PBO:0040201"}


id: PR:Q9P7P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hop1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7P2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific protein hop1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.02","synonyms":[{"name":"Spom972h-hop1","type":"exact"},{"name":"linear element-associated protein hop1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7P2"}


id: PBO:0070435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPGRIP1 like","termid":"PBO:0070435"}


id: PBO:0070408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2 pseudogene 2","termid":"PBO:0070408"}


id: GO:0004579
data:
  {"annotated_genes":["SJAG_03333","SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78199,81062],"is_not":false,"summary":null,"term":"GO:0004579"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine.","definition_xrefs":["RHEA:22980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharyl transferase activity","termid":"GO:0004576"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03333":null,"SJAG_04127":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide-protein glycotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-446209","Reactome:R-HSA-9694793","EC:2.4.99.18","MetaCyc:RXN-16761"],"synonyms":[{"name":"asparagine N-glycosyltransferase activity","type":"exact"},{"name":"dolichyl-diphosphooligosaccharide-protein glycosyltransferase activity","type":"exact"},{"name":"dolichyl-diphosphooligosaccharide:protein-L-asparagine oligopolysaccharidotransferase activity","type":"exact"},{"name":"dolichyldiphosphooligosaccharide-protein glycosyltransferase activity","type":"exact"},{"name":"dolichyldiphosphooligosaccharide-protein oligosaccharyltransferase activity","type":"exact"},{"name":"dolichyldiphosphoryloligosaccharide-protein oligosaccharyltransferase activity","type":"exact"},{"name":"dolichylpyrophosphodiacetylchitobiose-protein glycosyltransferase activity","type":"exact"},{"name":"oligomannosyltransferase activity","type":"related"}],"termid":"GO:0004579","terms_by_termid":{"GO:0004579":null}}


id: PBO:0039484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A7, pseudogene","termid":"PBO:0039484"}


id: MONDO:0010673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifier, X-linked, for Neurofunctional defects","secondary_identifiers":["MEDGEN:326945","MESH:C564098","OMIM:309840","UMLS:C1839708"],"synonyms":[{"name":"Tourette syndrome, modifier of","type":"related"},{"name":"modifier, X-linked, for Neurofunctional defects","type":"exact"}],"termid":"MONDO:0010673","xrefs":{"Monarch":{"xref_id":"0010673"}}}


id: MONDO:0800312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated familial wooly hair disorder","termid":"MONDO:0008686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wooly hair, autosomal recessive 1, with or without hypotrichosis","secondary_identifiers":["MEDGEN:341227","UMLS:C1848435"],"synonyms":[{"name":"ARWH1","type":"exact"}],"termid":"MONDO:0800312","xrefs":{"Monarch":{"xref_id":"0800312"}}}


id: GO:0030791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + arsenite = S-adenosyl-L-homocysteine + methylarsonate.","definition_xrefs":["EC:2.1.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"arsenite methyltransferase activity","secondary_identifiers":["UM-BBD_reactionID:r0805","Reactome:R-HSA-5696213","Reactome:R-HSA-5696220"],"synonyms":[{"name":"S-adenosyl-L-methionine:arsenic(III) methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:arsenite As-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:methylarsonite As-methyltransferase activity","type":"related"}],"termid":"GO:0030791"}


id: MONDO:0800107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect","termid":"MONDO:0002070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"anterior deviation infundibular septum","secondary_identifiers":["MEDGEN:756812","SCTID:448619007","UMLS:C3164404"],"termid":"MONDO:0800107","xrefs":{"Monarch":{"xref_id":"0800107"}}}


id: PBO:0076791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin epsilon and delta complex 1","termid":"PBO:0076791"}


id: PBO:0073779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 1","termid":"PBO:0073779"}


id: GO:0030561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of 2'-O-ribose methylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA 2'-O-ribose methylation guide activity","termid":"GO:0030561"}


id: GO:0035410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5alpha-dihydrotestosterone + NAD+ = 5alpha-androstane-3,17-dione + NADH.","definition_xrefs":["GOC:ecd","PMID:4152755"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrotestosterone 17-beta-dehydrogenase activity (obsolete GO:0035410)","termid":"GO:0035410"}


id: PBO:0061609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear distribution C, dynein complex regulator","termid":"PBO:0061609"}


id: PBO:0030868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cytoskeleton_organization","termid":"PBO:0030868"}


id: PBO:0067141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 189, pseudogene","termid":"PBO:0067141"}


id: GO:0032395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an MHC class II protein complex and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"MHC class II receptor activity","synonyms":[{"name":"T cell receptor activity","type":"related"},{"name":"alpha-beta T cell receptor activity","type":"related"},{"name":"gamma-delta T cell receptor activity","type":"related"}],"termid":"GO:0032395"}


id: PBO:0070739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 9","termid":"PBO:0070739"}


id: PBO:0079633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 4, Y-linked","termid":"PBO:0079633"}


id: MONDO:0009965
data:
  {"annotated_genes":["SJAG_03876","SJAG_03132","SJAG_01822"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87031,87032,87033],"is_not":false,"summary":null,"term":"MONDO:0009965"}]},"cv_name":"mondo","definition":"Perlman syndrome is characterized principally by polyhydramnios, neonatal macrosomia, bilateral renal tumors (hamartomas with or without nephroblastomatosis), hypertrophy of the islets of Langerhans and facial dysmorphism.","definition_xrefs":["Orphanet:2849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01822":null,"SJAG_03132":null,"SJAG_03876":null},"genotype_count":0,"is_obsolete":false,"name":"Perlman syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:267000","NCIT:C103144","MEDGEN:162909","MESH:C536399","DOID:0060476","UMLS:C0796113","SCTID:722231005","icd11.foundation:795682441","GARD:3936"],"synonyms":[{"name":"PRLMNS","type":"related"},{"name":"Perlman syndrome","type":"exact"},{"name":"nephroblastomatosis - fetal ascites - macrosomia - Wilms tumor","type":"exact"},{"name":"nephroblastomatosis - foetal ascites - macrosomia - Wilms tumour","type":"exact"},{"name":"nephroblastomatosis fetal ascites macrosomia and Wilms tumor","type":"related"},{"name":"nephroblastomatosis foetal ascites macrosomia and Wilms tumour","type":"related"},{"name":"nephroblastomatosis, fetal ascites, macrosomia and Wilms tumor","type":"exact"},{"name":"nephroblastomatosis, fetal ascites, macrosomia, and Wilms tumor","type":"related"},{"name":"nephroblastomatosis, foetal ascites, macrosomia and Wilms tumour","type":"exact"},{"name":"nephroblastomatosis, foetal ascites, macrosomia, and Wilms tumour","type":"related"},{"name":"nephroblastomatosis-fetal ascites-macrosomia-Wilms tumor syndrome","type":"exact"},{"name":"nephroblastomatosis-fetal ascites-macrosomia-Wilms tumour syndrome","type":"exact"},{"name":"renal hamartomas, nephroblastomatosis and fetal gigantism","type":"exact"},{"name":"renal hamartomas, nephroblastomatosis and foetal gigantism","type":"exact"},{"name":"renal hamartomas, nephroblastomatosis, and fetal gigantism","type":"related"},{"name":"renal hamartomas, nephroblastomatosis, and foetal gigantism","type":"related"}],"termid":"MONDO:0009965","terms_by_termid":{"MONDO:0009965":null},"xrefs":{"Monarch":{"xref_id":"0009965"}}}


id: MONDO:0008778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, cutaneous bullous","secondary_identifiers":["MEDGEN:78672","OMIM:204900","MESH:C562644","ICD9:277.39","UMLS:C0268399","SCTID:38606009"],"synonyms":[{"name":"amyloidosis, cutaneous bullous","type":"exact"}],"termid":"MONDO:0008778","xrefs":{"Monarch":{"xref_id":"0008778"}}}


id: GO:0000393
data:
  {"annotated_genes":["SJAG_01504","SJAG_01152","SJAG_02295","SJAG_02455","SJAG_01200","SJAG_00859","SJAG_01315","SJAG_01214","SJAG_04497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65506],"is_not":false,"summary":null,"term":"GO:0000393"},{"annotations":[58384,107717,79764],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000349"},{"annotations":[111518,79133,74913,106789],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000350"},{"annotations":[102544],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000388"}]},"cv_name":"biological_process","definition":"Structural rearrangements of the spliceosome complex, containing RNA to be spliced, to generate a catalytic conformation.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00859":null,"SJAG_01152":null,"SJAG_01200":null,"SJAG_01214":null,"SJAG_01315":null,"SJAG_01504":null,"SJAG_02295":null,"SJAG_02455":null,"SJAG_04497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0065003","GO:0044085","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"spliceosomal conformational changes to generate catalytic conformation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"}],"termid":"GO:0000393","terms_by_termid":{"GO:0000349":null,"GO:0000350":null,"GO:0000388":null,"GO:0000393":null}}


id: GO:0051075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosylmethionine + 7-(aminomethyl)-7-deazaguanosine-tRNA = adenine + methionine + epoxyqueuosine-tRNA. 7-(aminomethyl)-7-deazaguanosine-tRNA is also known as preQ1-tRNA, and epoxyqueuosine-tRNA as oQ-tRNA.","definition_xrefs":["PMID:12731872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"},{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0016853","GO:0140101","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity","secondary_identifiers":["EC:2.4.99.17","RHEA:32155"],"synonyms":[{"name":"S-adenosyl methionine:tRNA ribosyltransferase-isomerase activity","type":"exact"}],"termid":"GO:0051075"}


id: PR:O74509
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vsl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar morphogenesis protein 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.06c","synonyms":[{"name":"Spom972h-vsl1","type":"exact"}],"termid":"PR:O74509"}


id: PR:Q9HDX2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An L-lactate dehydrogenase [cytochrome] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01244","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized lactate 2-monooxygenase PB1A11.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A11.03","secondary_identifiers":["UniProtKB:Q9HDX2"],"synonyms":[{"name":"Spom972h-lldD","type":"exact"}],"termid":"PR:Q9HDX2"}


id: GO:0018614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ethylbenzene + O2 + NADH + H+ = NAD+ + cis-2,3-dihydroxy-2,3-dihydroethylbenzene.","definition_xrefs":["UM-BBD_reactionID:r0247"],"gene_count":0,"genotype_count":0,"name":"obsolete ethylbenzene dioxygenase activity (obsolete GO:0018614)","termid":"GO:0018614"}


id: PBO:0004772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-2","termid":"PBO:0004772"}


id: PBO:0067553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 704, pseudogene","termid":"PBO:0067553"}


id: GO:0060857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the glial barrier between the blood and the brain. The glial cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["GOC:dph","GOC:sart","PMID:20080302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"is_a","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of glial blood-brain barrier","synonyms":[{"name":"establishment of glial BBB","type":"exact"},{"name":"establishment of glial blood/brain barrier","type":"exact"}],"termid":"GO:0060857"}


id: PBO:0054566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1968","termid":"PBO:0054566"}


id: GO:0036023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, in which the anatomical structures of a skeletal limb joint are generated and organized. A skeletal limb joint is the connecting structure between the bones of a limb.","definition_xrefs":["GOC:bf","Wikipedia:Joint"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb joint morphogenesis","termid":"GO:0036022"},{"relation_name":"is_a","term_name":"embryonic skeletal joint morphogenesis","termid":"GO:0060272"},{"relation_name":"part_of","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal limb joint morphogenesis","termid":"GO:0036023"}


id: GO:1902229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.","definition_xrefs":["GOC:rl","GOC:mtg_apoptosis","GOC:BHF","GOC:TermGenie","PMID:15314165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902229"}


id: GO:1904700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a granulosa cell.","definition_xrefs":["PMID:19208546","GOC:TermGenie","GO_REF:0000085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell apoptotic process","synonyms":[{"name":"granulosa cell apoptosis","type":"narrow"},{"name":"granulosa cell of ovary apoptosis","type":"narrow"},{"name":"granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904700"}


id: PBO:0078131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 12-2","termid":"PBO:0078131"}


id: PBO:0077507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 225","termid":"PBO:0077507"}


id: PBO:0050051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, P (pseudogene)","termid":"PBO:0050051"}


id: PBO:0045793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER degradation enhancing alpha-mannosidase like protein 3","termid":"PBO:0045793"}


id: MONDO:0043129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merlob grunebaum reisner syndrome","secondary_identifiers":["MESH:C537461","MEDGEN:419427","UMLS:C2931499"],"synonyms":[{"name":"familial opposable triphalangeal thumbs associated with duplication of the big toes","type":"related"}],"termid":"MONDO:0043129","xrefs":{"Monarch":{"xref_id":"0043129"}}}


id: GO:0019561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-phenylalanine under anaerobic conditions; occurs via the intermediates phenylpyruvate and phenylacetaldehyde.","definition_xrefs":["MetaCyc:ANAPHENOXI-PWY","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-phenylalanine catabolic process","termid":"GO:0006559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"anaerobic L-phenylalanine oxidation","termid":"GO:0019561"}


id: PBO:0017603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease catalytic subunit Slx1","termid":"PBO:0017603"}


id: GO:0046213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methyl ethyl ketone, a clear, colorless liquid with a fragrant, mint-like odor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyl ethyl ketone metabolic process","termid":"GO:0018928"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methyl ethyl ketone catabolic process","synonyms":[{"name":"methyl ethyl ketone breakdown","type":"exact"},{"name":"methyl ethyl ketone catabolism","type":"exact"},{"name":"methyl ethyl ketone degradation","type":"exact"}],"termid":"GO:0046213"}


id: MONDO:0015068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the rectum.","definition_xrefs":["NCIT:C135213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system neuroendocrine tumor, grade 1/2","termid":"MONDO:0000386"},{"relation_name":"is_a","term_name":"rectum neuroendocrine neoplasm","termid":"MONDO:0003646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal neuroendocrine tumor","secondary_identifiers":["UMLS:C5554035","MEDGEN:1810164"],"synonyms":[{"name":"neuroendocrine tumor of rectum, well differentiated, low or intermediate grade","type":"exact"},{"name":"rectal well differentiated neuroendocrine neoplasm","type":"exact"},{"name":"rectal well-differentiated neuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0015068","xrefs":{"Monarch":{"xref_id":"0015068"}}}


id: MONDO:0015312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unilateral choanal atresia is a, usually sporadic, congenital anomaly that is more commonly seen in females than in males (2:1), where the nose is blocked by bony or soft tissue formed during embryologic development on only one side (more commonly on the right side) and which is characterized by nasal obstruction and rhinorrhea, usually presenting at birth but that may go undetected until a respiratory infection aggravates the condition.","definition_xrefs":["Orphanet:137917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia","termid":"MONDO:0012155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, unilateral","secondary_identifiers":["MEDGEN:1843076","UMLS:C5680630","GARD:19889","icd11.foundation:1247369366"],"termid":"MONDO:0015312","xrefs":{"Monarch":{"xref_id":"0015312"}}}


id: GO:1904440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iron ions import across plasma membrane.","definition_xrefs":["GOC:BHF","GOC:kom","PMID:18353247","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of iron ion transmembrane transport","termid":"GO:0034761"},{"relation_name":"is_a","term_name":"regulation of iron ion import across plasma membrane","termid":"GO:1904438"},{"relation_name":"positively_regulates","term_name":"iron ion import across plasma membrane","termid":"GO:0098711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0098771"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0098771"],"is_obsolete":false,"name":"positive regulation of iron ion import across plasma membrane","secondary_identifiers":["GO:1903991"],"synonyms":[{"name":"activation of ferrous ion import into cell","type":"narrow"},{"name":"activation of ferrous iron import across plasma membrane","type":"narrow"},{"name":"positive regulation of ferrous ion import into cell","type":"related"},{"name":"positive regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"positive regulation of ferrous iron import into cell","type":"related"},{"name":"up regulation of ferrous ion import into cell","type":"related"},{"name":"up regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"up-regulation of ferrous ion import into cell","type":"related"},{"name":"up-regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"upregulation of ferrous ion import into cell","type":"related"},{"name":"upregulation of ferrous iron import across plasma membrane","type":"related"}],"termid":"GO:1904440"}


id: GO:0032777
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric H4/H2A histone acetyltransferase complex with a substrate preference of chromatin over free histones. It contains a subset of the proteins found in the larger NuA4 histone acetyltransferase complex; for example, the S. cerevisiae complex contains Esa1p, Yng2p, and Epl1p.","definition_xrefs":["GOC:rb","PMID:15964809","PMID:12782659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"piccolo histone acetyltransferase complex","termid":"GO:0032777"}


id: GO:0015802
data:
  {"annotated_genes":["SJAG_01336","SJAG_03256","SJAG_01636","SJAG_02716","SJAG_03400","SJAG_02029","SJAG_04725","SJAG_04715","SJAG_00877","SJAG_01923","SJAG_04983","SJAG_00051"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[96467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[105948,105946,105945,99231,105947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[105753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[100719,64322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[99246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[105756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[104723,105757,111999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01923":null,"SJAG_02029":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04715":null,"SJAG_04725":null,"SJAG_04983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"basic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015802","terms_by_termid":{"GO:0034488":null,"GO:0034490":null,"GO:0089708":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null,"GO:1903826":null,"GO:1990822":null}}


id: GO:0034320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexanoyl-CoA + an alcohol = CoA + a hexyl ester.","definition_xrefs":["PMID:16361250","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol O-hexanoyltransferase activity (obsolete GO:0034320)","termid":"GO:0034320"}


id: PBO:0029575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_DEM","termid":"PBO:0029575"}


id: GO:0016081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial (indirect) attachment of a synaptic vesicle membrane to the presynaptic active zone membrane, mediated by proteins protruding from the membrane and proteins of the presynaptic active zone cytoplasmic component. Synaptic vesicle tethering is the first step in this process.","definition_xrefs":["PMID:15217342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0140056","GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"synaptic vesicle docking","synonyms":[{"name":"synaptic vesicle docking during exocytosis","type":"related"},{"name":"synaptic vesicle docking involved in exocytosis","type":"exact"}],"termid":"GO:0016081"}


id: PBO:0049032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 19","termid":"PBO:0049032"}


id: GO:0090181
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"cholesterol metabolic process","termid":"GO:0008203"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of cholesterol metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0090181","terms_by_termid":{"GO:0045540":null}}


id: FYPO:0003032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to glucose starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during glucose starvation","synonyms":[{"name":"decreased RNA accumulation during glucose starvation","type":"related"},{"name":"decreased RNA level during cellular response to glucose starvation","type":"exact"},{"name":"decreased RNA level during glucose depletion","type":"exact"},{"name":"decreased RNA level during glucose deprivation","type":"exact"},{"name":"decreased RNA level during glucose limitation","type":"related"},{"name":"decreased transcript level during glucose starvation","type":"exact"},{"name":"reduced RNA level during glucose starvation","type":"exact"}],"termid":"FYPO:0003032"}


id: _global:is_kinase_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"_global:molecular_interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","secondary_identifiers":["RO:0002481"],"termid":"_global:is_kinase_activity"}


id: PBO:0041667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein","termid":"PBO:0041667"}


id: FYPO:0005868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is increased at ribosomal DNA.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mitotic recombination","termid":"FYPO:0000473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased mitotic recombination at rDNA","synonyms":[{"name":"increased mitotic recombination at rDNA during mitotic cell cycle","type":"related"},{"name":"increased mitotic recombination at rDNA during vegetative growth","type":"exact"},{"name":"increased mitotic recombination at ribosomal DNA","type":"exact"}],"termid":"FYPO:0005868"}


id: PBO:0047630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIGNL1 interacting regulator of recombination and mitosis","termid":"PBO:0047630"}


id: GO:0006965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria.","definition_xrefs":["GOC:mah","PMID:10973475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002816"},{"relation_name":"is_a","term_name":"positive regulation of antibacterial peptide biosynthetic process","termid":"GO:0006963"},{"relation_name":"positively_regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","synonyms":[{"name":"activation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"narrow"},{"name":"anti-Gram-positive bacterial peptide induction","type":"exact"},{"name":"anti-Gram-positive bacterial polypeptide induction","type":"exact"},{"name":"stimulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"narrow"},{"name":"up regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"},{"name":"up-regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"},{"name":"upregulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"}],"termid":"GO:0006965"}


id: MONDO:0021196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease by molecular activity disrupted (obsolete MONDO:0021196)","termid":"MONDO:0021196","xrefs":{"Monarch":{"xref_id":"0021196"}}}


id: GO:0052109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host cell wall callose deposition (obsolete GO:0052109)","synonyms":[{"name":"activation by symbiont of defense-related host cell wall callose deposition","type":"exact"},{"name":"positive regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host callose deposition","type":"related"},{"name":"positive regulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"stimulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"up regulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"up-regulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"upregulation by symbiont of defense-related host cell wall callose deposition","type":"related"}],"termid":"GO:0052109"}


id: PBO:0047730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1","termid":"PBO:0047730"}


id: MONDO:0003722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the internal auditory canal.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skull base meningioma","termid":"MONDO:0002998"},{"relation_name":"excluded_subClassOf","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"middle cranial fossa meningioma","termid":"MONDO:0003121"},{"relation_name":"is_a","term_name":"inner ear neoplasm","termid":"MONDO:0024320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal auditory canal meningioma","secondary_identifiers":["MEDGEN:235221","NCIT:C5307","DOID:5990","UMLS:C1334227"],"synonyms":[{"name":"internal acoustic meatus meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of internal acoustic meatus","type":"exact"},{"name":"meningioma of internal auditory canal","type":"exact"},{"name":"meningioma of the internal auditory canal","type":"exact"}],"termid":"MONDO:0003722","xrefs":{"Monarch":{"xref_id":"0003722"}}}


id: PBO:0040403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 4","termid":"PBO:0040403"}


id: PR:O94536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ucp12 gene.","definition_xrefs":["UniProtKB:O94536","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase ucp12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.09c","synonyms":[{"name":"Spom972h-ucp12","type":"exact"}],"termid":"PR:O94536"}


id: MONDO:0100014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disease characterized by sudden onset of photopsias and scotomata in patients with no family history of retinitis pigmentosa, followed by visual field and central vision loss.","definition_xrefs":["PMID:29721944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease of ear, nose and throat","termid":"MONDO:0000587"},{"relation_name":"is_a","term_name":"autoimmune disorder of the nervous system","termid":"MONDO:0002977"},{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"autoimmune retinopathy","secondary_identifiers":["MEDGEN:1388012","UMLS:C3203657","SCTID:724809006","icd11.foundation:1969888129"],"synonyms":[{"name":"AIR","type":"exact"},{"name":"autoimmune disease of retina","type":"exact"},{"name":"retina autoimmune disease","type":"exact"}],"termid":"MONDO:0100014","xrefs":{"Monarch":{"xref_id":"0100014"}}}


id: PBO:0057721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-6","termid":"PBO:0057721"}


id: MONDO:0012199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any posterior polymorphous corneal dystrophy in which the cause of the disease is a mutation in the COL8A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior polymorphous corneal dystrophy","termid":"MONDO:0020364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior polymorphous corneal dystrophy 2","secondary_identifiers":["DOID:0110856","MESH:C565176","MEDGEN:377757","OMIM:609140","GARD:18213","UMLS:C1852795"],"synonyms":[{"name":"COL8A2 posterior polymorphous corneal dystrophy","type":"exact"},{"name":"PPCD2","type":"exact"},{"name":"Ppcd2","type":"exact"},{"name":"corneal dystrophy, POSTERIOR polymorphous, 2","type":"related"},{"name":"corneal dystrophy, posterior polymorphous 2","type":"exact"},{"name":"corneal dystrophy, posterior polymorphous, type 2","type":"exact"},{"name":"posterior polymorphous corneal dystrophy caused by mutation in COL8A2","type":"exact"},{"name":"posterior polymorphous corneal dystrophy type 2","type":"exact"}],"termid":"MONDO:0012199","xrefs":{"Monarch":{"xref_id":"0012199"}}}


id: PBO:0061245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA activated by DNA damage","termid":"PBO:0061245"}


id: PATO:0000104
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000104 osmotic response sensitivity (obsolete PATO:0000104)","termid":"PATO:0000104"}


id: PBO:0042986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint kinase 1","termid":"PBO:0042986"}


id: PBO:0043616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMMD5 pseudogene 1","termid":"PBO:0043616"}


id: PR:Q09823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec10 gene.","definition_xrefs":["UniProtKB:Q09823","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.04c","synonyms":[{"name":"Spom972h-rec10","type":"exact"}],"termid":"PR:Q09823"}


id: PBO:0028554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_cytoplasmic_microtubule_depolymerization","termid":"PBO:0028554"}


id: PBO:0062875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTULIN divergent transcript","termid":"PBO:0062875"}


id: PBO:0077460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM184B antisense RNA 1","termid":"PBO:0077460"}


id: GO:0031176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.","definition_xrefs":["EC:3.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"endo-1,4-beta-xylanase activity","secondary_identifiers":["MetaCyc:3.2.1.8-RXN"],"synonyms":[{"name":"1,4-beta-D-xylan xylanohydrolase activity","type":"related"},{"name":"1,4-beta-xylan xylanohydrolase activity","type":"related"},{"name":"beta-1,4-xylan xylanohydrolase activity","type":"related"},{"name":"beta-1,4-xylanase activity","type":"related"},{"name":"beta-D-xylanase activity","type":"related"},{"name":"beta-xylanase activity","type":"related"},{"name":"endo-(1,4)-beta-xylanase(1,4)-beta-xylan 4-xylanohydrolase activity","type":"related"},{"name":"endo-(1->4)-beta-xylanase(1->4)-beta-xylan 4-xylanohydrolase activity","type":"related"},{"name":"endo-1,4-beta-D-xylanase activity","type":"related"},{"name":"endo-1,4-xylanase activity","type":"related"},{"name":"endo-beta-1,4-xylanase activity","type":"related"},{"name":"xylanase","type":"broad"}],"termid":"GO:0031176"}


id: FYPO:0003296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ribosome binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000702"],"is_obsolete":false,"name":"normal ribosome binding","termid":"FYPO:0003296"}


id: FYPO:0006488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"increased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"increased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0006488"}


id: GO:0061050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue growth","termid":"GO:0055021"},{"relation_name":"regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"}


id: PBO:0073407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 10","termid":"PBO:0073407"}


id: MONDO:0700013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 6 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 disorder","termid":"MONDO:0700013","xrefs":{"Monarch":{"xref_id":"0700013"}}}


id: MONDO:0958035
data:
  {"annotated_genes":["SJAG_00377"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87945],"is_not":false,"summary":null,"term":"MONDO:0958035"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 23","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1845723","UMLS:C5882747","OMIM:620686"],"termid":"MONDO:0958035","terms_by_termid":{"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0958035"}}}


id: GO:0000451
data:
  {"annotated_genes":["SJAG_00943","SJAG_03410","SJAG_00744","SJAG_02350","SJAG_02377"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100690,61618,95992,112171,113329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to the 2'-oxygen atom of a nucleotide residue in an rRNA molecule during ribosome biogenesis.","definition_xrefs":["ISBN:1555811337","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methylation","termid":"GO:0031167"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00744":null,"SJAG_00943":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_03410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0042254","GO:0010467"],"is_obsolete":false,"name":"rRNA 2'-O-methylation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000451","terms_by_termid":{"GO:0000452":null}}


id: PBO:0031216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Mre11_complex_assembly","termid":"PBO:0031216"}


id: PBO:0085849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the ER; YBR287W is not an essential gene","termid":"PBO:0085849"}


id: PBO:0082201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 1,2-mannosyltransferase; involved in glycosyl phosphatidyl inositol (GPI) biosynthesis; required for addition of the fourth, side branching mannose to the GPI core structure","termid":"PBO:0082201"}


id: PBO:0082664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the conserved oligomeric Golgi complex; a cytosolic tethering complex (Cog1p through Cog8p) that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments","termid":"PBO:0082664"}


id: PBO:0048521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 4","termid":"PBO:0048521"}


id: PBO:0072373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27","termid":"PBO:0072373"}


id: GO:0031378
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity, located in a plastid.","definition_xrefs":["ISBN:0471331309","GOC:mah","ISBN:0716720094","PMID:12957385"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid type II fatty acid synthase complex (obsolete GO:0031378)","synonyms":[{"name":"plastid type II FAS complex","type":"exact"},{"name":"plastid type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031378"}


id: PBO:0111847
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rik1/ddb1 subfamily","termid":"PBO:0111847"}


id: PBO:0038606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 3","termid":"PBO:0038606"}


id: MONDO:0957453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare open neural tube defect characterized by no other malformation than myelomeningocele (spina bifida with a neural placode exposed at the top of a non-epidermised dysplasic meninges sac and Chiari II malformation).","definition_xrefs":["Orphanet:645383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelomeningocele","termid":"MONDO:0019773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"true myelomeningocele","secondary_identifiers":["UMLS:C5816713","MEDGEN:1843418"],"termid":"MONDO:0957453","xrefs":{"Monarch":{"xref_id":"0957453"}}}


id: GO:0008531
data:
  {"annotated_genes":["SJAG_04845"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74617],"is_not":false,"summary":null,"term":"GO:0008531"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + riboflavin = ADP + FMN + 2 H+.","definition_xrefs":["EC:2.7.1.26","RHEA:14357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"riboflavin kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RIBOFLAVINKIN-RXN","Reactome:R-HSA-196964","KEGG_REACTION:R00549"],"synonyms":[{"name":"ATP:riboflavin 5'-phosphotransferase activity","type":"related"},{"name":"FK","type":"related"},{"name":"flavokinase activity","type":"related"},{"name":"riboflavin kinase (phosphorylating)","type":"related"},{"name":"riboflavine kinase activity","type":"related"}],"termid":"GO:0008531","terms_by_termid":{"GO:0008531":null}}


id: PBO:0119674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, glycine","termid":"PBO:0119674"}


id: PBO:0004528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Ker1","termid":"PBO:0004528"}


id: PBO:0062118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 45 (gene/pseudogene)","termid":"PBO:0062118"}


id: PBO:0060816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal EF-hand calcium binding protein 1","termid":"PBO:0060816"}


id: MONDO:0008437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the ATL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 3A","secondary_identifiers":["DOID:0110791","MESH:C536864","NCIT:C142893","OMIM:182600","Orphanet:100984","GARD:5041","UMLS:C2931355","MEDGEN:419393"],"synonyms":[{"name":"ATL1 hereditary spastic paraplegia","type":"exact"},{"name":"FSP1","type":"exact"},{"name":"SPG3A","type":"exact"},{"name":"Spg3","type":"related"},{"name":"Strumpell disease","type":"related"},{"name":"Strümpell disease","type":"exact"},{"name":"autosomal dominant familial spastic paraplegia 1","type":"exact"},{"name":"autosomal dominant spastic paraplegia 3","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 3","type":"exact"},{"name":"familial spastic paraplegia, autosomal dominant, 1","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in ATL1","type":"exact"},{"name":"hereditary spastic paraplegia type 3A","type":"exact"},{"name":"spastic Paraplegia 3A","type":"exact"},{"name":"spastic paraplegia 3","type":"related"},{"name":"spastic paraplegia 3, autosomal dominant","type":"related"},{"name":"spastic paraplegia 3a, autosomal dominant","type":"exact"},{"name":"strumpell disease","type":"exact"}],"termid":"MONDO:0008437","xrefs":{"Monarch":{"xref_id":"0008437"}}}


id: PBO:0084476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone alpha-factor, made by alpha cells; interacts with mating type a cells to induce cell cycle arrest and other responses leading to mating; also encoded by MF(ALPHA)1, which is more highly expressed; binds copper(II) ions","termid":"PBO:0084476"}


id: GO:0052497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within the xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves, of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by organism of xylem in other organism involved in symbiotic interaction (obsolete GO:0052497)","synonyms":[{"name":"occlusion by organism of xylem in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052497"}


id: MONDO:0016342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial isolated arrhythmogenic right ventricular dysplasia (ARVC) is the familial autosomal dominant form of ARVC, a heart muscle disease characterized by life-threatening ventricular arrhythmias with left bundle branch block configuration that may manifest with palpitations, ventricular tachycardia, syncope and sudden fatal attacks, and that is due to dystrophy and fibro-fatty replacement of the right ventricular myocardium that may lead to right ventricular aneurysms.","definition_xrefs":["Orphanet:217656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"},{"relation_name":"is_a","term_name":"arrhythmogenic right ventricular cardiomyopathy","termid":"MONDO:0016587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial isolated arrhythmogenic right ventricular dysplasia","secondary_identifiers":["GARD:17129","icd11.foundation:460188584","MEDGEN:901869","OMIMPS:107970","SCTID:715865008","UMLS:C4274968"],"synonyms":[{"name":"familial isolated ARVC","type":"exact"},{"name":"familial isolated ARVD","type":"exact"},{"name":"familial isolated arrhythmogenic right ventricular cardiomyopathy","type":"exact"},{"name":"familial isolated arrhythmogenic right ventricular dysplasia","type":"exact"},{"name":"familial isolated arrhythmogenic ventricular cardiomyopathy","type":"exact"},{"name":"familial isolated arrhythmogenic ventricular dysplasia","type":"exact"}],"termid":"MONDO:0016342","xrefs":{"Monarch":{"xref_id":"0016342"}}}


id: PBO:0081018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 49","termid":"PBO:0081018"}


id: PBO:0034202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_organization_of","termid":"PBO:0034202"}


id: FYPO:0000161
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}],"single_locus_phenotype":[{"annotations":[121375,121660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[121667,121395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring assembly is abnormal. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["GO:1903475","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0004803","FYPO:0000631","FYPO:0000032","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal actomyosin contractile ring assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","sty1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"abnormal actomyosin contractile ring formation","type":"related"},{"name":"abnormal contractile ring assembly","type":"exact"},{"name":"abnormal cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic ring assembly","type":"related"},{"name":"abnormal cytokinetic ring formation","type":"related"},{"name":"abnormal mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0000161","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000248":null,"FYPO:0000729":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: MONDO:0005270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete motor neuron disease (obsolete MONDO:0005270)","termid":"MONDO:0005270","xrefs":{"Monarch":{"xref_id":"0005270"}}}


id: MONDO:0004622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic intestinal vascular insufficiency","secondary_identifiers":["DOID:8633","ICD9:557.1","MEDGEN:90228","SCTID:111354009","UMLS:C0311262"],"synonyms":[{"name":"CMI - chronic mesenteric ischaemia","type":"exact"},{"name":"chronic mesenteric ischemia","type":"exact"}],"termid":"MONDO:0004622","xrefs":{"Monarch":{"xref_id":"0004622"}}}


id: GO:0044248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular catabolic process (obsolete GO:0044248)","synonyms":[{"name":"cellular breakdown","type":"exact"},{"name":"cellular catabolism","type":"exact"},{"name":"cellular degradation","type":"exact"}],"termid":"GO:0044248"}


id: GO:0019679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate that occur in the methylcitrate cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"propionate metabolic process, methylcitrate cycle","secondary_identifiers":["MetaCyc:PWY0-42"],"synonyms":[{"name":"propionate metabolism, methylcitrate cycle","type":"exact"}],"termid":"GO:0019679"}


id: FYPO:0006383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype that results in the formation of an ascus that contains spores of non-uniform size and DNA content, as well as DNA that is not contained within any of the spores. There may also be fewer than four spores.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:17632059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus containing non-uniform spores","termid":"FYPO:0000913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000121","FYPO:0000002"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus containing non-uniform spores and unencapsulated DNA","synonyms":[{"name":"abnormal ascospore formation resulting in formation ascus containing non-uniform spores and unencapsulated DNA","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci containing non-uniform spores and unencapsulated DNA","type":"related"},{"name":"abnormal sporulation resulting in formation of ascus containing non-uniform spores and DNA excluded from spores","type":"exact"}],"termid":"FYPO:0006383"}


id: PBO:0062514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily J member 3","termid":"PBO:0062514"}


id: FYPO:0000233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"long cytoplasmic microtubules","synonyms":[{"name":"elongated cytoplasmic microtubules","type":"exact"},{"name":"long cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"long cytoplasmic microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defect, long cytoplasmic microtubules","type":"exact"},{"name":"microtubule organization defects, long cytoplasmic microtubules","type":"exact"}],"termid":"FYPO:0000233"}


id: PBO:0067789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 91","termid":"PBO:0067789"}


id: GO:0060491
data:
  {"annotated_genes":["SJAG_04509","SJAG_00514","SJAG_02379","SJAG_01794","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95338,89723,113347,92695,91712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell projection assembly.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"cell projection assembly","termid":"GO:0030031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection formation","type":"related"}],"termid":"GO:0060491","terms_by_termid":{"GO:1902917":null}}


id: PBO:0043460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 1","termid":"PBO:0043460"}


id: PBO:0051585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18 receptor 1","termid":"PBO:0051585"}


id: PBO:0068758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 3, pseudogene","termid":"PBO:0068758"}


id: PR:O74389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug176 gene.","definition_xrefs":["UniProtKB:O74389","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 176 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.14","synonyms":[{"name":"Spom972h-mug176","type":"exact"}],"termid":"PR:O74389"}


id: PBO:0078458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 10 (non-functional)","termid":"PBO:0078458"}


id: FYPO:0005530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the IRC1L boundary element is abolished.","definition_xrefs":["PomBase:mah","PMID:25972440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to chromatin at boundary element IRC1L","synonyms":[{"name":"abolished protein localisation to chromatin at boundary element IRC1L during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromeric boundary element IRC1L","type":"exact"},{"name":"abolished protein localization to chromatin at boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at boundary element IRC1L during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005530"}


id: PBO:0070751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 7","termid":"PBO:0070751"}


id: PBO:0038750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR1A pseudogene 1","termid":"PBO:0038750"}


id: GO:0052395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of defense-related symbiont nitric oxide production (obsolete GO:0052395)","synonyms":[{"name":"activation by organism of defense-related symbiont NO production","type":"exact"},{"name":"activation by organism of defense-related symbiont nitric acid production","type":"exact"},{"name":"induction by organism of defense-related symbiont NO production","type":"exact"},{"name":"induction by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052395"}


id: GO:0016456
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An RNA-protein complex localized to the X chromosome of males where it is required for the hyper-transcriptional activation of the X chromosome. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:20622855","GOC:mr","Wikipedia:XY_sex-determination_system","GOC:ma","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dosage compensation complex","termid":"GO:0046536"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"X chromosome","termid":"GO:0000805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"X chromosome located dosage compensation complex, transcription activating","synonyms":[{"name":"dosage compensation complex","type":"broad"}],"termid":"GO:0016456"}


id: GO:1900453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of long term synaptic depression.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"regulation of long-term synaptic depression","termid":"GO:1900452"},{"relation_name":"negatively_regulates","term_name":"long-term synaptic depression","termid":"GO:0060292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of long-term synaptic depression","synonyms":[{"name":"down regulation of LTD","type":"related"},{"name":"down regulation of long term depression","type":"broad"},{"name":"down regulation of long term synaptic depression","type":"exact"},{"name":"down-regulation of LTD","type":"related"},{"name":"down-regulation of long term depression","type":"broad"},{"name":"down-regulation of long term synaptic depression","type":"exact"},{"name":"downregulation of LTD","type":"related"},{"name":"downregulation of long term depression","type":"broad"},{"name":"downregulation of long term synaptic depression","type":"exact"},{"name":"inhibition of LTD","type":"related"},{"name":"inhibition of long term depression","type":"broad"},{"name":"inhibition of long term synaptic depression","type":"narrow"},{"name":"negative regulation of LTD","type":"related"},{"name":"negative regulation of long term depression","type":"broad"},{"name":"negative regulation of long term synaptic depression","type":"related"}],"termid":"GO:1900453"}


id: GO:0008375
data:
  {"annotated_genes":["SJAG_04821","SJAG_00442","SJAG_04119","SJAG_03311","SJAG_06383","SJAG_02913","SJAG_04868","SJAG_04881","SJAG_02804","SJAG_03066"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76015,76225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004100"},{"annotations":[100576,64340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004577"},{"annotations":[94949,119249,110546,79259,94859,113582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017176"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to a sugar.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03311":null,"SJAG_04119":null,"SJAG_04821":null,"SJAG_04868":null,"SJAG_04881":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"acetylglucosaminyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9694656","Reactome:R-HSA-5694487","Reactome:R-HSA-9683648","Reactome:R-HSA-8879117"],"synonyms":[{"name":"GlcNAc transferase activity","type":"exact"}],"termid":"GO:0008375","terms_by_termid":{"GO:0004100":null,"GO:0004577":null,"GO:0017176":null}}


id: GO:0048611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, whose specific outcome is the progression of the ectodermal gut over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic digestive tract development","termid":"GO:0048566"},{"relation_name":"part_of","term_name":"ectodermal digestive tract development","termid":"GO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic ectodermal digestive tract development","synonyms":[{"name":"embryonic ectodermal gut development","type":"related"}],"termid":"GO:0048611"}


id: PBO:0061983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 2","termid":"PBO:0061983"}


id: SO:0000868
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift caused by inserting one base.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift","termid":"SO:0000865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_1_frameshift","synonyms":[{"name":"plus 1 frameshift","type":"exact"}],"termid":"SO:0000868"}


id: PBO:0041706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 1","termid":"PBO:0041706"}


id: GO:0005523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle.","definition_xrefs":["ISBN:0815316194","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tropomyosin binding","termid":"GO:0005523"}


id: GO:0035571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The monomethylation of the N-terminal serine of proteins to form the derivative N-methylserine.","definition_xrefs":["PMID:20668449"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-serine monomethylation (obsolete GO:0035571)","termid":"GO:0035571"}


id: GO:0042646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a plastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid stroma","termid":"GO:0009532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid nucleoid","termid":"GO:0042646"}


id: FYPO:0000685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter occurs at a lower level of pheromone than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional response to pheromone at decreased pheromone level (obsolete FYPO:0000685)","synonyms":[{"name":"increased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"increased transcriptional response to pheromone","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter by pheromones at decreased pheromone level","type":"exact"},{"name":"sensitive to pheromone","type":"related"}],"termid":"FYPO:0000685"}


id: GO:0000720
data:
  {"annotated_genes":["SJAG_00500","SJAG_03613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118698,118699],"is_not":false,"summary":null,"term":"GO:0000720"}]},"cv_name":"biological_process","definition":"The repair of UV-induced T-T, C-T, and C-C dimers by the recognition and removal of the damaged DNA strand from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair","termid":"GO:0006289"},{"relation_name":"is_a","term_name":"pyrimidine dimer repair","termid":"GO:0006290"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00500":null,"SJAG_03613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"pyrimidine dimer repair by nucleotide-excision repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000720","terms_by_termid":{"GO:0000720":null}}


id: PBO:0085321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 4,5-bisphosphate 5-phosphatase; synaptojanin-like protein with an N-terminal Sac1 domain, plays a role in phosphatidylinositol 4,5-bisphosphate homeostasis and in endocytosis; null mutation confers cold-tolerant growth","termid":"PBO:0085321"}


id: MONDO:0017228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 autoimmune pancreatitis is a form of autoimmune pancreatitis (see this term) affecting both sexes and having a younger age of onset (<60 years) and presenting with abdominal pain, steatorrhea and obstructive jaundice.","definition_xrefs":["Orphanet:280315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune pancreatitis","termid":"MONDO:0015175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune pancreatitis type 2","secondary_identifiers":["GARD:21077","UMLS:C5197785","MEDGEN:1679984"],"synonyms":[{"name":"AIP type 2","type":"exact"},{"name":"duct-centric pancreatitis","type":"exact"}],"termid":"MONDO:0017228","xrefs":{"Monarch":{"xref_id":"0017228"}}}


id: PR:O43059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal protein syp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.06","synonyms":[{"name":"Spom972h-syp1","type":"exact"}],"termid":"PR:O43059"}


id: GO:0015005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Brilliant blue copper-containing protein of low molecular weight found in some bacteria; thought to transfer electrons to cytochrome oxidase. This definition includes pseudoazurin.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete azurin (obsolete GO:0015005)","synonyms":[{"name":"azurin","type":"exact"}],"termid":"GO:0015005"}


id: MONDO:0021971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Baraitser Rodeck garner syndrome (obsolete MONDO:0021971)","termid":"MONDO:0021971","xrefs":{"Monarch":{"xref_id":"0021971"}}}


id: PBO:0058057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4278","termid":"PBO:0058057"}


id: MONDO:0004624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the palatine uvula.","direct_ancestors":[{"relation_name":"is_a","term_name":"soft palate cancer","termid":"MONDO:0004611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"uvula cancer","secondary_identifiers":["SCTID:363389001","UMLS:C0153377","DOID:8635","MEDGEN:102265","NCIT:C35177","ICD9:145.4"],"synonyms":[{"name":"cancer of palatine uvula","type":"exact"},{"name":"malignant neoplasm of palatine uvula","type":"exact"},{"name":"malignant palatine uvula neoplasm","type":"exact"},{"name":"malignant tumor of uvula","type":"exact"},{"name":"malignant tumour of uvula","type":"exact"},{"name":"malignant uvula neoplasm","type":"exact"},{"name":"malignant uvula tumor","type":"exact"},{"name":"malignant uvula tumour","type":"exact"},{"name":"malignant uvular neoplasm","type":"exact"},{"name":"malignant uvular tumor","type":"exact"},{"name":"malignant uvular tumour","type":"exact"},{"name":"palatine uvula cancer","type":"exact"}],"termid":"MONDO:0004624","xrefs":{"Monarch":{"xref_id":"0004624"}}}


id: GO:0097699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to fluid shear stress in a vascular endothelial cell.","definition_xrefs":["GOC:BHF_miRNA","GOC:bc","GOC:BHF","PMID:21768538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fluid shear stress","termid":"GO:0071498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to fluid shear stress","type":"exact"}],"termid":"GO:0097699"}


id: FYPO:0005371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which linear minichromosomes are lost at a higher frequency than normal during the vegetative growth phase of the life cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PMID:11226171","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss during vegetative growth","termid":"FYPO:0001840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased linear minichromosome loss during vegetative growth","synonyms":[{"name":"increased linear minichromosome loss during mitotic cell cycle","type":"related"},{"name":"mitotic linear minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0005371"}


id: PBO:0066397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 1 alpha","termid":"PBO:0066397"}


id: GO:0022622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the root system over time, from its formation to the mature structure.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root system development","termid":"GO:0022622"}


id: GO:0032743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-2 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-2 production","termid":"GO:0032663"},{"relation_name":"positively_regulates","term_name":"interleukin-2 production","termid":"GO:0032623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-2 production","secondary_identifiers":["GO:0045086","GO:1900042"],"synonyms":[{"name":"activation of interleukin-2 production","type":"narrow"},{"name":"positive regulation of IL-2 production","type":"exact"},{"name":"positive regulation of interleukin-2 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-2 secretion","type":"narrow"},{"name":"stimulation of interleukin-2 production","type":"narrow"},{"name":"up regulation of interleukin-2 production","type":"exact"},{"name":"up-regulation of interleukin-2 production","type":"exact"},{"name":"upregulation of interleukin-2 production","type":"exact"}],"termid":"GO:0032743"}


id: GO:1901868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecgonine methyl ester.","definition_xrefs":["PMID:22665766","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"ecgonine methyl ester metabolic process","termid":"GO:1901867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecgonine methyl ester catabolic process","synonyms":[{"name":"ecgonine methyl ester breakdown","type":"exact"},{"name":"ecgonine methyl ester catabolism","type":"exact"},{"name":"ecgonine methyl ester degradation","type":"exact"}],"termid":"GO:1901868"}


id: GO:0090330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"regulates","term_name":"platelet aggregation","termid":"GO:0070527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of platelet aggregation","termid":"GO:0090330"}


id: PBO:0059801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 27","termid":"PBO:0059801"}


id: PBO:0058991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motilin receptor","termid":"PBO:0058991"}


id: PBO:0054432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1828","termid":"PBO:0054432"}


id: MONDO:0957538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis 28","secondary_identifiers":["UMLS:C5830642","DOID:0081382","OMIM:620452","MEDGEN:1841278"],"termid":"MONDO:0957538","xrefs":{"Monarch":{"xref_id":"0957538"}}}


id: PBO:0001273
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lowe syndrome","termid":"PBO:0001273"}


id: PBO:0091717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis19/Eic1","termid":"PBO:0091717"}


id: GO:2000010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to the cell surface.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell surface","termid":"GO:2000008"},{"relation_name":"positively_regulates","term_name":"protein localization to cell surface","termid":"GO:0034394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell surface","synonyms":[{"name":"positive regulation of protein localisation at cell surface","type":"exact"},{"name":"positive regulation of protein localization at cell surface","type":"exact"}],"termid":"GO:2000010"}


id: PBO:0064055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 89","termid":"PBO:0064055"}


id: PBO:0045922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 14 pseudogene 1","termid":"PBO:0045922"}


id: PBO:0078055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 45","termid":"PBO:0078055"}


id: MONDO:0003239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Camurati-Engelmann disease (obsolete MONDO:0003239)","termid":"MONDO:0003239","xrefs":{"Monarch":{"xref_id":"0003239"}}}


id: PBO:0063576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARGC1 and ESRR induced regulator, muscle 1","termid":"PBO:0063576"}


id: PBO:0083505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF BDF2/YDL070W","termid":"PBO:0083505"}


id: GO:0140279
data:
  {"annotated_genes":["SJAG_00514","SJAG_03342","SJAG_03704","SJAG_01188","SJAG_01805","SJAG_04468","SJAG_04776","SJAG_01114","SJAG_04597","SJAG_04666","SJAG_03631","SJAG_05290","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[91713,79735,115354,94279,108334,119904,108994,117475,95668,107121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[94280,96282,89358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic division septum formation. Division septum formation is the assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of division septum assembly","termid":"GO:0032955"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"regulates","term_name":"mitotic division septum assembly","termid":"GO:0140278"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic division septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"related"},{"name":"regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"related"}],"termid":"GO:0140279","terms_by_termid":{"GO:0140281":null,"GO:1905757":null,"GO:1905758":null}}


id: GO:0102646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 14betaH-scalarane-17alpha-19-diol = all-trans-geranylfarnesol + H2O.","definition_xrefs":["PMID:24200803","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"14betaH-scalarane-17alpha-19-diol synthase activity","secondary_identifiers":["MetaCyc:RXN-15759"],"termid":"GO:0102646"}


id: GO:0042476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"odontogenesis","secondary_identifiers":["GO:0042477","Wikipedia:Odontogenesis"],"synonyms":[{"name":"odontogenesis of calcareous or chitinous tooth","type":"narrow"},{"name":"odontogeny","type":"exact"},{"name":"odontosis","type":"exact"},{"name":"tooth development","type":"related"},{"name":"tooth morphogenesis","type":"exact"}],"termid":"GO:0042476"}


id: PBO:0029631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_exocytosis","termid":"PBO:0029631"}


id: FYPO:0003646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of pyrithiamine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to pyrithiamine","synonyms":[{"name":"resistance to pyrithiamine during mitotic cell cycle","type":"related"},{"name":"resistance to pyrithiamine during vegetative growth","type":"exact"},{"name":"resistant to pyrithiamine","type":"exact"}],"termid":"FYPO:0003646"}


id: PBO:0074153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E2A (pseudogene)","termid":"PBO:0074153"}


id: GO:0021725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior raphe nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:cls","GOC:curators","GOC:cvs","GOC:dgh","PMID:19003874","GOC:cjm","GO_REF:0000021","GOC:jid","ZFA:0000440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior raphe nucleus development","synonyms":[{"name":"anterior raphe nucleus development","type":"broad"},{"name":"superior central nucleus development","type":"broad"}],"termid":"GO:0021725"}


id: MONDO:0000384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign abnormal growth of the cells that comprise the bladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign urinary system neoplasm","termid":"MONDO:0004180"},{"relation_name":"is_a","term_name":"urinary bladder neoplasm","termid":"MONDO:0004987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder benign neoplasm","secondary_identifiers":["NCIT:C3618","ICD9:223.3","SCTID:91992005","MEDGEN:57811","UMLS:C0154017","ICD10CM:D30.3","DOID:0050623"],"synonyms":[{"name":"benign bladder neoplasm","type":"exact"},{"name":"benign bladder tumor","type":"exact"},{"name":"benign bladder tumour","type":"exact"},{"name":"benign neoplasm of bladder","type":"exact"},{"name":"benign neoplasm of the bladder","type":"exact"},{"name":"benign neoplasm of the urinary bladder","type":"exact"},{"name":"benign neoplasm of urinary bladder","type":"exact"},{"name":"benign tumor of bladder","type":"exact"},{"name":"benign tumor of the bladder","type":"exact"},{"name":"benign tumor of the urinary bladder","type":"exact"},{"name":"benign tumor of urinary bladder","type":"exact"},{"name":"benign tumour of bladder","type":"exact"},{"name":"benign tumour of the bladder","type":"exact"},{"name":"benign tumour of the urinary bladder","type":"exact"},{"name":"benign tumour of urinary bladder","type":"exact"},{"name":"benign urinary bladder neoplasm","type":"exact"},{"name":"benign urinary bladder tumor","type":"exact"},{"name":"benign urinary bladder tumour","type":"exact"},{"name":"urinary bladder benign neoplasm","type":"exact"}],"termid":"MONDO:0000384","xrefs":{"Monarch":{"xref_id":"0000384"}}}


id: PATO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000194 spontaneous_activity (obsolete PATO:0000194)","termid":"PATO:0000194"}


id: MONDO:0013300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Greatly exaggerated width of the mouth, resulting from failure of union of the maxillary and mandibular processes, with extension of the oral orifice toward the ear. The defect may be unilateral or bilateral. (Dorland, 27th ed)","definition_xrefs":["MESH:D008265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"commissural facial cleft","secondary_identifiers":["ICD9:744.83","SCTID:40159009","UMLS:C3150792","OMIM:613545","GARD:16975","Orphanet:141276","MEDGEN:462142","icd11.foundation:1460924303"],"synonyms":[{"name":"commissural cleft, isolated","type":"related"},{"name":"lateral cleft, isolated","type":"related"},{"name":"macrostomia","type":"exact"},{"name":"macrostomia, isolated","type":"related"},{"name":"transverse cleft, isolated","type":"related"}],"termid":"MONDO:0013300","xrefs":{"Monarch":{"xref_id":"0013300"}}}


id: GO:0090224
data:
  {"annotated_genes":["SJAG_04464","SJAG_00514","SJAG_00244","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[73204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[117052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[91717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"spindle organization","termid":"GO:0007051"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"regulation of spindle organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle organisation","type":"exact"}],"termid":"GO:0090224","terms_by_termid":{"GO:0060236":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: GO:0170054
data:
  {"annotated_genes":["SJAG_05212","SJAG_00686","SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91544,106859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044692"},{"annotations":[79623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061632"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a ribonuclease.","definition_xrefs":["PMID:24736845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activator activity","termid":"GO:0170053"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_04682":null,"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"ribonuclease activator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA nuclease activator activity","type":"exact"}],"termid":"GO:0170054","terms_by_termid":{"GO:0044692":null,"GO:0061632":null}}


id: PBO:0031056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores_and_undivided_germinated_spores_(obsolete_FYPO:0000321)","termid":"PBO:0031056"}


id: FYPO:0001538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of potassium ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular potassium level","synonyms":[{"name":"normal cellular potassium accumulation","type":"related"},{"name":"normal cellular potassium ion level","type":"exact"},{"name":"normal cellular potassium level during mitotic cell cycle","type":"related"},{"name":"normal cellular potassium level during vegetative growth","type":"exact"}],"termid":"FYPO:0001538"}


id: PBO:0004499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2A (predicted)","termid":"PBO:0004499"}


id: PBO:0073444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI5 dependent homologous recombination repair protein 1","termid":"PBO:0073444"}


id: PBO:0070950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 5","termid":"PBO:0070950"}


id: PBO:0045536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA2 upstream binding RNA","termid":"PBO:0045536"}


id: MONDO:0034670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic postaxial polydactyly (obsolete MONDO:0034670)","secondary_identifiers":["Orphanet:498467"],"termid":"MONDO:0034670","xrefs":{"Monarch":{"xref_id":"0034670"}}}


id: MONDO:0018178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilatation of the intestinal lymphatic system usually caused by an obstruction in the intestinal wall. It may be congenital or acquired and is characterized by diarrhea; hypoproteinemia; peripheral and/or abdominal edema; and protein-losing enteropathies.","definition_xrefs":["MESH:D008201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal lymphangiectasia","secondary_identifiers":["GARD:12331","MEDGEN:9828","NANDO:2200914","Orphanet:36204","icd11.foundation:1255239964","MedDRA:10025213","NANDO:2100256","UMLS:C0024215","SCTID:197260007","ICD9:457.1","HP:0002593"],"synonyms":[{"name":"intestinal lymphangiectasia","type":"exact"},{"name":"intestinal lymphangiectasia (disease)","type":"exact"}],"termid":"MONDO:0018178","xrefs":{"Monarch":{"xref_id":"0018178"}}}


id: PBO:0067819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 121","termid":"PBO:0067819"}


id: PBO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative splicing","termid":"PBO:0002475"}


id: PBO:0044674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD domain containing 1","termid":"PBO:0044674"}


id: PBO:0072172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 9","termid":"PBO:0072172"}


id: GO:0018245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O4' atom of peptidyl-tyrosine, O4'-glycosyl-L-tyrosine; the carbohydrate is glucose, the origin for glycogen.","definition_xrefs":["RESID:AA0157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked glycosylation via tyrosine","synonyms":[{"name":"protein amino acid O-linked glycosylation via tyrosine","type":"exact"}],"termid":"GO:0018245"}


id: PBO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14-N (predicted)","termid":"PBO:0002165"}


id: PBO:0065131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKG2 antisense RNA 1","termid":"PBO:0065131"}


id: MONDO:0034106
data:
  {"annotated_genes":["SJAG_01507"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87949],"is_not":false,"summary":null,"term":"MONDO:0034106"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01507":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0002320","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 73","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:544503","MEDGEN:1681654","DOID:0112209","UMLS:C5193065","GARD:17988","OMIM:618379"],"synonyms":[{"name":"DEE73","type":"exact"},{"name":"developmental and epileptic encephalopathy 73","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 73","type":"exact"},{"name":"rnf13-related severe early-onset epileptic encephalopathy","type":"exact"}],"termid":"MONDO:0034106","terms_by_termid":{"MONDO:0034106":null},"xrefs":{"Monarch":{"xref_id":"0034106"}}}


id: MONDO:0100552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare hereditary ATTR amyloidosis (hATTR) characterized by a progressive, length-dependent sensorimotor axonal polyneuropathy and/or autonomic neuropathy in adulthood. Renal, ocular and cardiac involvement also frequently occurs. Two different phenotypes are associated with this mutation, namely early-onset V30M and late-onset V30M, that differ in terms of age on onset (<50 years or >50 years, respectively), presenting features, histopathological characteristics, rate of disease progression and response to therapy.","definition_xrefs":["Orphanet:85447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis, hereditary systemic 1","termid":"MONDO:0971004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"ATTRV30M amyloidosis","secondary_identifiers":["GARD:16754","icd11.foundation:1736273667","MEDGEN:78669","UMLS:C0268384"],"synonyms":[{"name":"ATTRV30M-related amyloidosis","type":"exact"},{"name":"TTR amyloid neuropathyy","type":"related"},{"name":"amyloidosis transthyretin related","type":"related"},{"name":"familial amyloid polyneuropathy type I","type":"related"},{"name":"familial amyloid polyneuropathy, Portuguese-Swedish-Japanese type","type":"related"},{"name":"hereditary ATTRV30M-related amyloidosis","type":"exact"},{"name":"transthyretin amyloid neuropathy","type":"related"},{"name":"transthyretin amyloid polyneuropathy","type":"related"}],"termid":"MONDO:0100552","xrefs":{"Monarch":{"xref_id":"0100552"}}}


id: MONDO:0032871
data:
  {"annotated_genes":["SJAG_02322","SJAG_03895"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88704,88705],"is_not":false,"summary":null,"term":"MONDO:0032871"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 19, transient infantile","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070400","MEDGEN:1684698","OMIM:618688","UMLS:C5231463"],"synonyms":[{"name":"HLD19","type":"related"},{"name":"LEUKODYSTROPHY, HYPOMYELINATING, 19, TRANSIENT INFANTILE","type":"related"}],"termid":"MONDO:0032871","terms_by_termid":{"MONDO:0032871":null},"xrefs":{"Monarch":{"xref_id":"0032871"}}}


id: PBO:0027212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_amino_acid_biosynthesis_gene_mRNA_during_vegetative_growth","termid":"PBO:0027212"}


id: MONDO:1011410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitamin-K-Dependent blood coagulation factors deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin-K-dependent blood coagulation factors deficiency, non-human animal","secondary_identifiers":["OMIA:001054"],"termid":"MONDO:1011410","xrefs":{"Monarch":{"xref_id":"1011410"}}}


id: PBO:0073726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 7","termid":"PBO:0073726"}


id: PBO:0046159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 1","termid":"PBO:0046159"}


id: GO:0030301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cholesterol transport","termid":"GO:0030301"}


id: GO:0051224
data:
  {"annotated_genes":["SJAG_03970","SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[107753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization","termid":"GO:1904950"},{"relation_name":"negatively_regulates","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01311":null,"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein transport","type":"exact"},{"name":"down-regulation of protein transport","type":"exact"},{"name":"downregulation of protein transport","type":"exact"},{"name":"inhibition of protein transport","type":"narrow"}],"termid":"GO:0051224","terms_by_termid":{"GO:0042308":null,"GO:0042997":null}}


id: MOD:01051
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-nitrobenzoyl","synonyms":[{"name":"NBz","type":"exact"}],"termid":"MOD:01051"}


id: PBO:0055017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2432","termid":"PBO:0055017"}


id: MONDO:0005673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder affecting the small intestine. It is caused by the stasis of food and subsequent overgrowth of bacteria in a portion of the small intestine that is unintentionally bypassed as a complication of abdominal surgery or as a sequela of gastrointestinal disorders which impede effective motility. Clinical signs include bloating, abdominal pain, diarrhea and weight loss. If untreated, the clinical course progresses to malabsorption of fats, vitamin B12 and calcium, the latter which predisposes to nephrolithiasis and osteoporosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malabsorption syndrome","termid":"MONDO:0020598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"blind loop syndrome","secondary_identifiers":["MEDGEN:600","MESH:D001765","ICD9:579.2","UMLS:C0005750","icd11.foundation:1719064637","DOID:10606","SCTID:66379009","NCIT:C34431","EFO:0007175"],"synonyms":[{"name":"bacterial overgrowth syndrome","type":"exact"},{"name":"blind loop syndrome","type":"exact"},{"name":"stasis (blind loop) syndrome","type":"exact"},{"name":"stasis syndrome","type":"exact"}],"termid":"MONDO:0005673","xrefs":{"Monarch":{"xref_id":"0005673"}}}


id: PBO:0029948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029948"}


id: GO:0015846
data:
  {"annotated_genes":["SJAG_03817","SJAG_02125","SJAG_02060","SJAG_02059","SJAG_04134","SJAG_02344","SJAG_04469"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902047"},{"annotations":[72327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015847"},{"annotations":[108341],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902267"},{"annotations":[70565,70468,62358,62382,57969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"},{"annotations":[62357,70467,62381,70564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The directed movement of polyamines, organic compounds containing two or more amino groups, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null,"SJAG_03817":null,"SJAG_04134":null,"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"polyamine transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0015846","terms_by_termid":{"GO:0015847":null,"GO:1902047":null,"GO:1902267":null,"GO:1903710":null,"GO:1903711":null}}


id: PBO:0027403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_tyrosine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0027403"}


id: PBO:0043266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 25","termid":"PBO:0043266"}


id: PBO:0113081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine desulfurase involved in iron-sulfur cluster biogenesis; required for thio-modification of mitochondrial and cytoplasmic tRNAs; involved in DNA damage response by providing iron-sulfur cluster cofactors for DNA repair enzymes; essential protein located predominantly in mitochondria","termid":"PBO:0113081"}


id: GO:0052104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates systemic acquired resistance in the host organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host systemic acquired resistance (obsolete GO:0052104)","synonyms":[{"name":"activation by organism of SAR in host","type":"exact"},{"name":"activation by organism of systemic acquired resistance in host","type":"exact"},{"name":"induction by organism of SAR in host","type":"exact"},{"name":"induction by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of systemic acquired resistance in host","type":"exact"},{"name":"positive regulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host systemic acquired resistance","type":"related"},{"name":"positive regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"stimulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"up regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"up-regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"upregulation by symbiont of systemic acquired resistance in host","type":"related"}],"termid":"GO:0052104"}


id: PBO:0050168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 24","termid":"PBO:0050168"}


id: PBO:0089552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transmembrane transporter","termid":"PBO:0089552"}


id: GO:0005781
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome targeting signal receptor complex (obsolete GO:0005781)","synonyms":[{"name":"peroxisome targeting signal receptor complex","type":"exact"}],"termid":"GO:0005781"}


id: MONDO:0100047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing basal cell carcinoma.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell carcinoma, susceptibility to","termid":"MONDO:0100047","xrefs":{"Monarch":{"xref_id":"0100047"}}}


id: PBO:0063721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone receptor","termid":"PBO:0063721"}


id: GO:0048406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nerve growth factor (NGF).","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin binding","termid":"GO:0043121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nerve growth factor binding","synonyms":[{"name":"NGF binding","type":"exact"},{"name":"beta-nerve growth factor binding","type":"exact"},{"name":"neurotrophin TRKA receptor activity","type":"related"}],"termid":"GO:0048406"}


id: PBO:0030947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_fusion","termid":"PBO:0030947"}


id: MONDO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the urethra. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign urethral neoplasm","termid":"MONDO:0004177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethra leiomyoma","secondary_identifiers":["DOID:2142","MEDGEN:237035","NCIT:C6171","UMLS:C1336888"],"synonyms":[{"name":"leiomyoma of the urethra","type":"exact"},{"name":"leiomyoma of urethra","type":"exact"},{"name":"urethra leiomyoma","type":"exact"},{"name":"urethral leiomyoma","type":"exact"}],"termid":"MONDO:0002222","xrefs":{"Monarch":{"xref_id":"0002222"}}}


id: GO:0010171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the soma are generated and organized.","definition_xrefs":["ISBN:0140512888","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"body morphogenesis","termid":"GO:0010171"}


id: PBO:0027725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_fusion","termid":"PBO:0027725"}


id: GO:0140059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic tree are generated and organized into dendritic branches.","definition_xrefs":["GOC:bc","PMID:23270857","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"is_a","term_name":"neuron projection arborization","termid":"GO:0140058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite arborization","termid":"GO:0140059"}


id: GO:0061714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining selectively with extracellular folic acid and delivering it into the cell via endocytosis.","definition_xrefs":["GOC:BHF","GOC:hal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"folic acid receptor activity","synonyms":[{"name":"folate receptor activity","type":"exact"}],"termid":"GO:0061714"}


id: PBO:0091845
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene product is often automatically annotated to the NADH dehydrogenase of the mitochondrial respiratory chain complex I. However, fission yeast lacks the remaining 40 subunits found in mammals","termid":"PBO:0091845"}


id: PBO:0038813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20","termid":"PBO:0038813"}


id: GO:0009401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake and phosphorylation of specific carbohydrates from the extracellular environment; uptake and phosphorylation are coupled, making the PTS a link between the uptake and metabolism of sugars; phosphoenolpyruvate is the original phosphate donor; phosphoenolpyruvate passes the phosphate via a signal transduction pathway, to enzyme 1 (E1), which in turn passes it on to the histidine protein, HPr; the next step in the system involves sugar-specific membrane-bound complex, enzyme 2 (EII), which transports the sugar into the cell; it includes the sugar permease, which catalyzes the transport reactions; EII is usually divided into three different domains, EIIA, EIIB, and EIIC.","definition_xrefs":["PMID:31209249","PMID:33820910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phosphoenolpyruvate-dependent sugar phosphotransferase system","synonyms":[{"name":"PTS system","type":"narrow"}],"termid":"GO:0009401"}


id: MONDO:0005634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute conjunctivitis that is characterized by bleeding into the conjunctiva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute conjunctivitis","termid":"MONDO:0001214"},{"relation_name":"is_a","term_name":"viral conjunctivitis","termid":"MONDO:0043541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute hemorrhagic conjunctivitis","secondary_identifiers":["UMLS:C0009765","NCIT:C34505","DOID:11227","ICD9:077.4","EFO:0007131","MESH:D003232","SCTID:398264003","MEDGEN:1094"],"synonyms":[{"name":"Apollo disease","type":"exact"},{"name":"epidemic hemorrhagic conjunctivitis","type":"exact"},{"name":"viral conjunctivitis","type":"related"}],"termid":"MONDO:0005634","xrefs":{"Monarch":{"xref_id":"0005634"}}}


id: PBO:0028607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation_during_vegetative_growth","termid":"PBO:0028607"}


id: PBO:0090377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic fizzy-related APC coactivator Fzr2","termid":"PBO:0090377"}


id: GO:0102185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NADH(2-) + O2 + H+ = 4alpha-formyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NAD(1-) + 2 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102185)","termid":"GO:0102185"}


id: PBO:0079197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 26, pseudogene","termid":"PBO:0079197"}


id: PR:P87306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.04c","synonyms":[{"name":"Spom972h-srb4","type":"exact"},{"name":"mediator complex subunit 17 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B 4 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87306"}


id: FYPO:0006513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the telomere is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal telomere morphology","termid":"FYPO:0006512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere morphology during vegetative growth","synonyms":[{"name":"normal telomere morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006513"}


id: MONDO:1012431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod dysplasia, non-human animal","termid":"MONDO:1011991"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod dysplasia, dog","secondary_identifiers":["OMIA:001670-9615"],"termid":"MONDO:1012431","xrefs":{"Monarch":{"xref_id":"1012431"}}}


id: PBO:0054685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2093","termid":"PBO:0054685"}


id: PBO:0044908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dexi homolog","termid":"PBO:0044908"}


id: GO:0140105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-10 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11244051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-10-mediated signaling pathway","synonyms":[{"name":"IL-10-mediated signaling pathway","type":"exact"},{"name":"interleukin-10-mediated signalling pathway","type":"exact"}],"termid":"GO:0140105"}


id: MONDO:0015830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mullerian aplasia","termid":"MONDO:0019128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial bilateral aplasia of the mullerian ducts","secondary_identifiers":["GARD:20172","UMLS:C5679589","Orphanet:180068","MEDGEN:1843187"],"synonyms":[{"name":"incomplete bilateral aplasia of the Mullerian ducts","type":"exact"},{"name":"incomplete bilateral aplasia of the Müllerian ducts","type":"exact"},{"name":"partial bilateral aplasia of the Müllerian ducts","type":"related"}],"termid":"MONDO:0015830","xrefs":{"Monarch":{"xref_id":"0015830"}}}


id: GO:0010062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that suppresses trichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of trichoblast fate specification","termid":"GO:0010061"},{"relation_name":"is_a","term_name":"negative regulation of plant epidermal cell differentiation","termid":"GO:1903889"},{"relation_name":"negatively_regulates","term_name":"trichoblast fate specification","termid":"GO:0010057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of trichoblast fate specification","synonyms":[{"name":"down regulation of trichoblast fate","type":"exact"},{"name":"down-regulation of trichoblast fate","type":"exact"},{"name":"downregulation of trichoblast fate","type":"exact"},{"name":"inhibition of trichoblast fate","type":"narrow"}],"termid":"GO:0010062"}


id: GO:2001003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of pectin catabolic process","synonyms":[{"name":"regulation of pectin breakdown","type":"exact"},{"name":"regulation of pectin catabolism","type":"exact"},{"name":"regulation of pectin degradation","type":"exact"}],"termid":"GO:2001003"}


id: GO:0009356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that possesses 4-amino-4-deoxychorismate synthase activity.","definition_xrefs":["PMID:2251281","PMID:7592344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"aminodeoxychorismate synthase complex","synonyms":[{"name":"4-amino-4-deoxychorismate synthase complex","type":"related"},{"name":"ADC synthase complex","type":"exact"},{"name":"p-aminobenzoate synthetase complex","type":"related"}],"termid":"GO:0009356"}


id: PBO:0069839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1125, pseudogene","termid":"PBO:0069839"}


id: PBO:0058694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6822","termid":"PBO:0058694"}


id: PBO:0082736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; zinc-finger inhibitor of HO transcription; mRNA is localized and translated in the distal tip of anaphase cells, resulting in accumulation of Ash1p in daughter cell nuclei and inhibition of HO expression; potential Cdc28p substrate","termid":"PBO:0082736"}


id: PBO:0056899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIER1 transcriptional regulator","termid":"PBO:0056899"}


id: GO:0047803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + sulfite = L-cysteate + sulfide.","definition_xrefs":["EC:4.4.1.10","MetaCyc:CYSTEINE-LYASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cysteine lyase activity","secondary_identifiers":["RHEA:20916"],"synonyms":[{"name":"L-cysteine hydrogen-sulfide-lyase (adding sulfite)","type":"related"},{"name":"L-cysteine hydrogen-sulfide-lyase (adding sulfite; L-cysteate-forming)","type":"related"},{"name":"cysteine (sulfite) lyase activity","type":"related"}],"termid":"GO:0047803"}


id: MONDO:0004923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic inflammation of lacrimal passage","secondary_identifiers":["SCTID:267653001","ICD9:375.4","DOID:9935","MEDGEN:509865","UMLS:C0155239"],"termid":"MONDO:0004923","xrefs":{"Monarch":{"xref_id":"0004923"}}}


id: GO:0043939
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation","termid":"GO:0043937"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"sporulation","termid":"GO:0043934"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporulation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043939","terms_by_termid":{"GO:0075297":null}}


id: MONDO:0005537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Crohn disease involving a pathogenic inflammatory response in the anal region.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Crohn disease","termid":"MONDO:0005011"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"perianal Crohn disease","secondary_identifiers":["MEDGEN:574362","UMLS:C0341395","SCTID:235796008","EFO:0005627"],"synonyms":[{"name":"perianal Crohn's disease","type":"exact"}],"termid":"MONDO:0005537","xrefs":{"Monarch":{"xref_id":"0005537"}}}


id: PBO:0001486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb family telomere binding protein (predicted)","termid":"PBO:0001486"}


id: GO:0140275
data:
  {"annotated_genes":["SJAG_04237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119797],"is_not":false,"summary":null,"term":"GO:0140275"}]},"cv_name":"cellular_component","definition":"A mitochondrial intermembrane space bridging complex consisting of components of the MICOS complex in the inner mitochondrial membrane, the SAM complex in the outer membrane, a conserved DNAJ protein (human DNAJC11) and Metaxin 1.","definition_xrefs":["PMID:26477565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"MIB complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial intermembrane space bridging complex","type":"exact"},{"name":"mitofilin complex","type":"exact"}],"termid":"GO:0140275","terms_by_termid":{"GO:0140275":null}}


id: PBO:0053210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LGALS8 antisense RNA 1","termid":"PBO:0053210"}


id: GO:0015319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + phosphate(out) = Na+(in) + phosphate(in).","definition_xrefs":["TC:2.A.1.14.6"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:inorganic phosphate symporter activity (obsolete GO:0015319)","synonyms":[{"name":"sodium:phosphate symporter activity","type":"exact"}],"termid":"GO:0015319"}


id: GO:1904306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastro-intestinal system smooth muscle contraction.","definition_xrefs":["PMID:10821044","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904304"},{"relation_name":"positively_regulates","term_name":"gastro-intestinal system smooth muscle contraction","termid":"GO:0014831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastro-intestinal system smooth muscle contraction","synonyms":[{"name":"activation of gastro-intestinal system smooth muscle contraction","type":"narrow"},{"name":"up regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"up-regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"upregulation of gastro-intestinal system smooth muscle contraction","type":"exact"}],"termid":"GO:1904306"}


id: PR:Q9UTB8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PHD finger-like domain-containing protein 5A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01040","PRO:DNx","PANTHER:PTHR13120:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ini1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.02c","secondary_identifiers":["UniProtKB:Q9UTB8"],"synonyms":[{"name":"Spom972h-PHF5A","type":"exact"}],"termid":"PR:Q9UTB8"}


id: PR:Q9HDV6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mor2 gene.","definition_xrefs":["UniProtKB:Q9HDV6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein mor2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.04c","synonyms":[{"name":"Spom972h-mor2","type":"exact"},{"name":"morphological round protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV6"}


id: GO:1900702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of orcinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of orcinol biosynthetic process","termid":"GO:1900701"},{"relation_name":"negatively_regulates","term_name":"orcinol biosynthetic process","termid":"GO:0046197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of orcinol biosynthetic process","synonyms":[{"name":"down regulation of orcinol anabolism","type":"exact"},{"name":"down regulation of orcinol biosynthesis","type":"exact"},{"name":"down regulation of orcinol biosynthetic process","type":"exact"},{"name":"down regulation of orcinol formation","type":"exact"},{"name":"down regulation of orcinol synthesis","type":"exact"},{"name":"down-regulation of orcinol anabolism","type":"exact"},{"name":"down-regulation of orcinol biosynthesis","type":"exact"},{"name":"down-regulation of orcinol biosynthetic process","type":"exact"},{"name":"down-regulation of orcinol formation","type":"exact"},{"name":"down-regulation of orcinol synthesis","type":"exact"},{"name":"downregulation of orcinol anabolism","type":"exact"},{"name":"downregulation of orcinol biosynthesis","type":"exact"},{"name":"downregulation of orcinol biosynthetic process","type":"exact"},{"name":"downregulation of orcinol formation","type":"exact"},{"name":"downregulation of orcinol synthesis","type":"exact"},{"name":"inhibition of orcinol anabolism","type":"exact"},{"name":"inhibition of orcinol biosynthesis","type":"exact"},{"name":"inhibition of orcinol biosynthetic process","type":"narrow"},{"name":"inhibition of orcinol formation","type":"exact"},{"name":"inhibition of orcinol synthesis","type":"exact"},{"name":"negative regulation of orcinol anabolism","type":"exact"},{"name":"negative regulation of orcinol biosynthesis","type":"exact"},{"name":"negative regulation of orcinol formation","type":"exact"},{"name":"negative regulation of orcinol synthesis","type":"exact"}],"termid":"GO:1900702"}


id: _global:preceded_by
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"ends_after","termid":"_global:ends_after"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preceded_by","secondary_identifiers":["BFO:0000062"],"termid":"_global:preceded_by"}


id: PBO:0113065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; required for diauxic shift-induced histone H2B deposition onto rDNA genes; transcriptional modulator involved in regulation of structural phospholipid biosynthesis genes and metabolically unrelated genes, as well as maintenance of telomeres, mating efficiency, and sporulation; localizes to both the nucleus and mitochondria where it may play a role in mitophagy","termid":"PBO:0113065"}


id: GO:0051993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abscisic acid glucose ester + H2O = abscisic acid + beta-D-glucose.","definition_xrefs":["PMID:16990135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"abscisic acid glucose ester beta-glucosidase activity","secondary_identifiers":["EC:3.2.1.175","MetaCyc:RXN-11469","RHEA:31347"],"synonyms":[{"name":"ABA-GE beta-glucosidase activity","type":"exact"}],"termid":"GO:0051993"}


id: MONDO:0018936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign bone-forming neoplasm usually arising from the spine. It is a well-circumscribed lytic tumor that varies in size. The tumor is composed of woven bone trabeculae and shares similar histologic characteristics with the osteoid osteoma. Surgical curettage is the treatment of choice. The prognosis is excellent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoblastoma","secondary_identifiers":["DOID:0060098","Orphanet:58040","HP:0011846","ICD10CM:D16.5","GARD:18854","ICDO:9200/0","MedDRA:10004430","MESH:D018215","NCIT:C3294","UMLS:C0029417","icd11.foundation:1948326341","MEDGEN:18212"],"synonyms":[{"name":"giant osteoid osteoma","type":"exact"},{"name":"ossifying giant cell tumor","type":"exact"},{"name":"ossifying giant cell tumour","type":"exact"},{"name":"osteoblastoma","type":"exact"},{"name":"osteoblastoma (disease)","type":"exact"},{"name":"osteoblastoma, benign","type":"exact"}],"termid":"MONDO:0018936","xrefs":{"Monarch":{"xref_id":"0018936"}}}


id: GO:0015303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: galactose or glucose(out) = galactose or glucose(in).","definition_xrefs":["TC:2.A.1.1.6"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose, glucose uniporter activity (obsolete GO:0015303)","synonyms":[{"name":"galactose, glucose uniporter activity","type":"exact"}],"termid":"GO:0015303"}


id: PBO:0077025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 7, pseudogene","termid":"PBO:0077025"}


id: PBO:0079587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D3","termid":"PBO:0079587"}


id: PBO:0031711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitophagy","termid":"PBO:0031711"}


id: FYPO:0001864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation takes place in cells that are not subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"mating without glucose starvation","synonyms":[{"name":"conjugation without glucose starvation","type":"exact"},{"name":"mating in the absence of glucose starvation","type":"exact"},{"name":"mating without glucose depletion","type":"exact"},{"name":"mating without glucose deprivation","type":"exact"}],"termid":"FYPO:0001864"}


id: PBO:0085195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ornithine transporter of the mitochondrial inner membrane; exports ornithine from mitochondria as part of arginine biosynthesis; functionally complemented by human ortholog, SLC25A15, which is associated with hyperammonaemia-hyperornithinaemia-homocitrullinuria (HHH) syndrome, but HHH-associated variants fail to complement","termid":"PBO:0085195"}


id: MONDO:0010817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the KCNQ4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 2A","secondary_identifiers":["GARD:18099","MEDGEN:436997","MESH:C567441","UMLS:C2677637","OMIM:600101","DOID:0110558"],"synonyms":[{"name":"DFNA2A","type":"narrow"},{"name":"KCNQ4 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 2A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 2A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in KCNQ4","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 2A","type":"narrow"},{"name":"deafness, autosomal dominant 2A","type":"narrow"},{"name":"deafness, autosomal dominant 2a","type":"narrow"},{"name":"deafness, autosomal dominant type 2A","type":"narrow"}],"termid":"MONDO:0010817","xrefs":{"Monarch":{"xref_id":"0010817"}}}


id: PR:P48383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sak1 gene.","definition_xrefs":["UniProtKB:P48383","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.14","synonyms":[{"name":"Spom972h-sak1","type":"exact"}],"termid":"PR:P48383"}


id: PBO:0078916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 5-1","termid":"PBO:0078916"}


id: PBO:0031514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_molecular_function","termid":"PBO:0031514"}


id: GO:1904398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuromuscular junction development.","definition_xrefs":["GO_REF:0000058","PMID:7722643","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of neuromuscular junction development","termid":"GO:1904396"},{"relation_name":"positively_regulates","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuromuscular junction development","synonyms":[{"name":"activation of NMJ stability","type":"related"},{"name":"activation of neuromuscular junction development","type":"narrow"},{"name":"activation of neuromuscular junction organization","type":"narrow"},{"name":"activation of neuromuscular junction stability","type":"related"},{"name":"positive regulation of NMJ stability","type":"related"},{"name":"positive regulation of neuromuscular junction organization","type":"exact"},{"name":"positive regulation of neuromuscular junction stability","type":"related"},{"name":"up regulation of NMJ stability","type":"related"},{"name":"up regulation of neuromuscular junction development","type":"exact"},{"name":"up regulation of neuromuscular junction organization","type":"exact"},{"name":"up regulation of neuromuscular junction stability","type":"related"},{"name":"up-regulation of NMJ stability","type":"related"},{"name":"up-regulation of neuromuscular junction development","type":"exact"},{"name":"up-regulation of neuromuscular junction organization","type":"exact"},{"name":"up-regulation of neuromuscular junction stability","type":"related"},{"name":"upregulation of NMJ stability","type":"related"},{"name":"upregulation of neuromuscular junction development","type":"exact"},{"name":"upregulation of neuromuscular junction organization","type":"exact"},{"name":"upregulation of neuromuscular junction stability","type":"related"}],"termid":"GO:1904398"}


id: PBO:0042774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP83 divergent transcript","termid":"PBO:0042774"}


id: PBO:0073458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A1","termid":"PBO:0073458"}


id: GO:0044314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 27 of the ubiquitin monomers, is added to a protein.","definition_xrefs":["PMID:19345326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K27-linked ubiquitination","synonyms":[{"name":"protein K27-linked polyubiquitination","type":"exact"}],"termid":"GO:0044314"}


id: PBO:0084491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein; involved in normal synaptonemal complex formation and pairing between homologous chromosomes during meiosis; relocalizes from mitochondrion to cytoplasm upon DNA replication stress","termid":"PBO:0084491"}


id: PBO:0061516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 6","termid":"PBO:0061516"}


id: GO:0071722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of compounds containing arsenic, including arsenates, arsenites, and arsenides. These include transport of such compounds away from sensitive areas and to compartments or complexes whose purpose is sequestration of arsenic or arsenic-containing compounds.","definition_xrefs":["PMID:11313333","GOC:kmv","PMID:20221439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"},{"relation_name":"part_of","term_name":"response to arsenic-containing substance","termid":"GO:0046685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of arsenic-containing substance","synonyms":[{"name":"detoxification of arsenic","type":"exact"}],"termid":"GO:0071722"}


id: PBO:0030088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_leucine_nitrogen_source","termid":"PBO:0030088"}


id: PBO:0065124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase D2","termid":"PBO:0065124"}


id: PBO:0034055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-determined_by","termid":"PBO:0034055"}


id: PBO:0067960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 262","termid":"PBO:0067960"}


id: MONDO:0009733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome within the first three motnhs of life, characterized initially by increased mesangial matrix, with or without hypertrophy and hyperplasia of podocytes, and eventual glomerular sclerosis.","definition_xrefs":["NCIT:C121198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 4","secondary_identifiers":["OMIM:256370","GARD:15210","UMLS:C3151568","MEDGEN:462918","DOID:0080383"],"synonyms":[{"name":"DMS","type":"related"},{"name":"NPHS4","type":"related"},{"name":"WT1 nephrotic syndrome","type":"exact"},{"name":"congenital nephrotic syndrome - diffuse mesangial sclerosis","type":"exact"},{"name":"diffuse isolated mesangial sclerosis","type":"related"},{"name":"diffuse mesangial sclerosis","type":"related"},{"name":"familial mesangial sclerosis","type":"related"},{"name":"isolated diffuse mesangial sclerosis","type":"related"},{"name":"mesangial sclerosis, diffuse","type":"related"},{"name":"nephrotic syndrome caused by mutation in WT1","type":"exact"},{"name":"nephrotic syndrome, early onset with diffuse mesangial sclerosis","type":"related"},{"name":"nephrotic syndrome, type 4","type":"exact"}],"termid":"MONDO:0009733","xrefs":{"Monarch":{"xref_id":"0009733"}}}


id: PBO:0059492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1 like (pseudogene)","termid":"PBO:0059492"}


id: GO:1904470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelin production.","definition_xrefs":["GOC:TermGenie","PMID:15560120","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"endothelin production","termid":"GO:1990775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of endothelin production","synonyms":[{"name":"regulation of EDN1 secretion","type":"narrow"},{"name":"regulation of EDN2 secretion","type":"narrow"},{"name":"regulation of EDN3 secretion","type":"narrow"},{"name":"regulation of endothelin secretion","type":"narrow"},{"name":"regulation of endothelin-1 secretion","type":"narrow"},{"name":"regulation of endothelin-2 secretion","type":"narrow"},{"name":"regulation of endothelin-3 secretion","type":"narrow"}],"termid":"GO:1904470"}


id: GO:0075230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the directed movement of a motile spore on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete spore movement on or near host (obsolete GO:0075230)","termid":"GO:0075230"}


id: GO:0051341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oxidoreductase activity","synonyms":[{"name":"oxidoreductase regulator","type":"exact"}],"termid":"GO:0051341"}


id: PBO:0066770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 68","termid":"PBO:0066770"}


id: PBO:0083128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-ribulose-5-phosphate 3-epimerase; catalyzes a reaction in the non-oxidative part of the pentose-phosphate pathway; mutants are sensitive to oxidative stress","termid":"PBO:0083128"}


id: GO:1902272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (R)-carnitine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of (R)-carnitine transmembrane transport","termid":"GO:1902272"}


id: PBO:0067456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 581, pseudogene","termid":"PBO:0067456"}


id: GO:0075097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction mediated by G-protein gamma subunit (obsolete GO:0075097)","termid":"GO:0075097"}


id: PBO:0074255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1C1","termid":"PBO:0074255"}


id: PBO:0072380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 6","termid":"PBO:0072380"}


id: PBO:0045064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG3 antisense RNA 1","termid":"PBO:0045064"}


id: PBO:0083979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosyl hydrolase required for beta-1,6-glucan biosynthesis; type II integral membrane protein that localizes to ER, plasma membrane, sites of polarized growth and secretory vesicles; functionally redundant with Skn1p; KRE6 has a paralog, SKN1, that arose from the whole genome duplication","termid":"PBO:0083979"}


id: GO:0043172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ferredoxin, any simple, nonenzymatic iron-sulfur protein that is characterized by having equal numbers of atoms of iron and labile sulfur. Iron and sulfur atoms are present in one or two clusters of two or four atoms of each.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete ferredoxin biosynthetic process (obsolete GO:0043172)","synonyms":[{"name":"ferredoxin anabolism","type":"exact"},{"name":"ferredoxin biosynthesis","type":"exact"},{"name":"ferredoxin formation","type":"exact"},{"name":"ferredoxin synthesis","type":"exact"}],"termid":"GO:0043172"}


id: MONDO:0021355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neoplasm of esophagus","secondary_identifiers":["UMLS:C0014859","SCTID:126817006","MEDGEN:4547","NCIT:C3028"],"synonyms":[{"name":"esophageal neoplasm","type":"exact"},{"name":"esophageal neoplasms, benign and malignant","type":"exact"},{"name":"esophageal tumor","type":"exact"},{"name":"esophageal tumors","type":"exact"},{"name":"esophageal tumour","type":"exact"},{"name":"esophageal tumours","type":"exact"},{"name":"esophagus neoplasm","type":"exact"},{"name":"esophagus neoplasm (disease)","type":"exact"},{"name":"esophagus tumor","type":"exact"},{"name":"neoplasm of esophagus","type":"exact"},{"name":"neoplasm of the esophagus","type":"exact"},{"name":"neoplasm of the oesophagus","type":"exact"},{"name":"oesophagus neoplasm","type":"exact"},{"name":"oesophagus neoplasm (disease)","type":"exact"},{"name":"oesophagus tumour","type":"exact"},{"name":"tumor of esophagus","type":"exact"},{"name":"tumor of the esophagus","type":"exact"},{"name":"tumour of oesophagus","type":"exact"},{"name":"tumour of the oesophagus","type":"exact"}],"termid":"MONDO:0021355","xrefs":{"Monarch":{"xref_id":"0021355"}}}


id: MONDO:0044663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aquagenic syringeal acrokeratoderma is a rare condition affecting the palms of the hands. It is characterized by the appearance or worsening of a palmar eruption, following brief exposure to water. The palmar eruption is made up of small, white or shining pimples that can conjoin into plaques. The feet are unaffected. Symptoms include a burning pain and a tightening sensation in the palms, as well as too much sweating. There are two variants. Most commonly, it is a temporary and recurrent condition that appears after submersion in water, known as the bhand in the bucket sign,b that gets better within minutes to hours of drying. A less common variant is characterized by persistent lesions that are worsened after water submersion. The cause of aquagenic syringeal acrokeratoderma is unknown, but likely relates to sweating. Several studies have found that it is present in about 40% to 84% of cystic fibrosis patients and also in carriers, which suggest that it may be caused by mutations in the CFTR gene. It is more often found in young women. Besides cystic fibrosis, it is also seen in wasting (marasmus) and nephrotic syndrome and also with the use of aspirin and other drugs such as rofecoxib and celecoxib. In most cases it does not need any treatment and resolves spontaneously. When necessary, it can be treated with topical aluminum chloride or salicylic acid ointment or with tap water iontophoresis.","definition_xrefs":["GARD:0012991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmoplantar keratosis","termid":"MONDO:0006590"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"aquagenic palmoplantar keratoderma","secondary_identifiers":["GARD:12991","MEDGEN:1789947","UMLS:C4087301","Orphanet:498359"],"synonyms":[{"name":"Transient reactive papulotranslucent acrokeratoderma","type":"related"},{"name":"aquagenic keratoderma","type":"exact"},{"name":"aquagenic palmoplantar keratoderma","type":"exact"},{"name":"aquagenic syringeal acrokeratoderma","type":"exact"},{"name":"aquagenic wrinkling of the hands","type":"related"},{"name":"aquagenic wrinkling of the palms","type":"exact"},{"name":"transient reactive papulotranslucent acrokeratoderma","type":"exact"}],"termid":"MONDO:0044663","xrefs":{"Monarch":{"xref_id":"0044663"}}}


id: GO:0102182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-carboxy-stigmasta-7,24(241)-dien-3beta-ol + NAD = avenastenone + NADH + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-carboxy-stigmasta-7,24(241)-dien-3beta-ol dehydrogenase/C4-decarboxylase activity (obsolete GO:0102182)","termid":"GO:0102182"}


id: PBO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 57","termid":"PBO:0050985"}


id: PBO:0026886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_vegetative_growth","termid":"PBO:0026886"}


id: GO:2001004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of pectin catabolic process","termid":"GO:2001003"},{"relation_name":"negatively_regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of pectin catabolic process","synonyms":[{"name":"negative regulation of pectin breakdown","type":"exact"},{"name":"negative regulation of pectin catabolism","type":"exact"},{"name":"negative regulation of pectin degradation","type":"exact"}],"termid":"GO:2001004"}


id: GO:0043906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ala-tRNA(Pro).","definition_xrefs":["GOC:jl","PMID:14663147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA deacylase activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"Ala-tRNA(Pro) deacylase activity","synonyms":[{"name":"Ala-tRNAPro hydrolase activity","type":"exact"}],"termid":"GO:0043906"}


id: PBO:0012315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal family membrane transporter (predicted)","termid":"PBO:0012315"}


id: FYPO:0006995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing at centromere","termid":"FYPO:0002360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal chromatin silencing at centromere inner repeat","synonyms":[{"name":"normal chromatin silencing at centromere imr","type":"exact"},{"name":"normal chromatin silencing at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at centromeric inner repeat region","type":"exact"},{"name":"normal heterochromatin silencing at centromere inner repeat","type":"exact"}],"termid":"FYPO:0006995"}


id: GO:0052765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 reduced coenzyme F420-(gamma-L-Glu)(n) + O2 = 2 oxidized coenzyme F420-(gamma-L-Glu)(n) + 2 H2O + 2 H+.","definition_xrefs":["PMID:15340796","RHEA:39711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"coenzyme F420H2 oxidase activity","secondary_identifiers":["EC:1.5.3.22"],"synonyms":[{"name":"F420H2 oxidase activity","type":"exact"},{"name":"F420H2:oxygen oxidoreductase activity","type":"exact"},{"name":"reduced coenzyme F420 oxidase activity","type":"exact"}],"termid":"GO:0052765"}


id: PBO:0059635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 1","termid":"PBO:0059635"}


id: MONDO:0010231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 20","secondary_identifiers":["MESH:C563142","OMIM:300047","MEDGEN:208677","GARD:22667","UMLS:C0796226","DOID:0112023"],"synonyms":[{"name":"MRX20","type":"exact"},{"name":"intellectual disability, X-linked 20","type":"exact"},{"name":"mental retardation, X-linked 20","type":"related"}],"termid":"MONDO:0010231","xrefs":{"Monarch":{"xref_id":"0010231"}}}


id: MONDO:0014151
data:
  {"annotated_genes":["SJAG_00412","SJAG_00392"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89136,89137],"is_not":false,"summary":null,"term":"MONDO:0014151"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null},"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypertension, neonatal, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615371","UMLS:C3714958","MEDGEN:811528"],"synonyms":[{"name":"PHN","type":"related"},{"name":"pulmonary hypertension, neonatal, susceptibility to","type":"exact"},{"name":"susceptibility to neonatal pulmonary hypertension","type":"related"}],"termid":"MONDO:0014151","terms_by_termid":{"MONDO:0014151":null},"xrefs":{"Monarch":{"xref_id":"0014151"}}}


id: PATO:0002300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that has a value that is increased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased quality","termid":"PATO:0002300"}


id: MONDO:1012214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent right aortic arch, non-human animal","termid":"MONDO:1011644"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent right aortic arch, puma","secondary_identifiers":["OMIA:000794-9696"],"termid":"MONDO:1012214","xrefs":{"Monarch":{"xref_id":"1012214"}}}


id: PBO:0078020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 10","termid":"PBO:0078020"}


id: PBO:0066865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 165","termid":"PBO:0066865"}


id: PBO:0047667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKTN antisense RNA 1","termid":"PBO:0047667"}


id: GO:1905923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of acetylcholine biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:aruk","GOC:bc","PMID:20164328","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of acetylcholine metabolic process","termid":"GO:0060409"},{"relation_name":"is_a","term_name":"regulation of acetylcholine biosynthetic process","termid":"GO:1905921"},{"relation_name":"positively_regulates","term_name":"acetylcholine biosynthetic process","termid":"GO:0008292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acetylcholine biosynthetic process","synonyms":[{"name":"activation of acetylcholine anabolism","type":"narrow"},{"name":"activation of acetylcholine biosynthesis","type":"narrow"},{"name":"activation of acetylcholine biosynthetic process","type":"narrow"},{"name":"activation of acetylcholine formation","type":"narrow"},{"name":"activation of acetylcholine synthesis","type":"narrow"},{"name":"positive regulation of acetylcholine anabolism","type":"exact"},{"name":"positive regulation of acetylcholine biosynthesis","type":"exact"},{"name":"positive regulation of acetylcholine formation","type":"exact"},{"name":"positive regulation of acetylcholine synthesis","type":"exact"},{"name":"up regulation of acetylcholine anabolism","type":"exact"},{"name":"up regulation of acetylcholine biosynthesis","type":"exact"},{"name":"up regulation of acetylcholine biosynthetic process","type":"exact"},{"name":"up regulation of acetylcholine formation","type":"exact"},{"name":"up regulation of acetylcholine synthesis","type":"exact"},{"name":"up-regulation of acetylcholine anabolism","type":"exact"},{"name":"up-regulation of acetylcholine biosynthesis","type":"exact"},{"name":"up-regulation of acetylcholine biosynthetic process","type":"exact"},{"name":"up-regulation of acetylcholine formation","type":"exact"},{"name":"up-regulation of acetylcholine synthesis","type":"exact"},{"name":"upregulation of acetylcholine anabolism","type":"exact"},{"name":"upregulation of acetylcholine biosynthesis","type":"exact"},{"name":"upregulation of acetylcholine biosynthetic process","type":"exact"},{"name":"upregulation of acetylcholine formation","type":"exact"},{"name":"upregulation of acetylcholine synthesis","type":"exact"}],"termid":"GO:1905923"}


id: PBO:0075408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 5B","termid":"PBO:0075408"}


id: MONDO:0030088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"permanent neonatal diabetes mellitus","termid":"MONDO:0100164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005015","MONDO:0019254","MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"diabetes mellitus, permanent neonatal 3","secondary_identifiers":["UMLS:C5394303","MEDGEN:1717271","OMIM:618857","GARD:16389"],"synonyms":[{"name":"DIABETES MELLITUS, PERMANENT NEONATAL 3","type":"exact"},{"name":"Developmental Delay, Epilepsy, and Neonatal Diabetes 2","type":"exact"},{"name":"PNDM3","type":"exact"},{"name":"diabetes mellitus, permanent neonatal 3","type":"exact"},{"name":"diabetes mellitus, permanent neonatal 3, with or without neurologic features","type":"exact"}],"termid":"MONDO:0030088","xrefs":{"Monarch":{"xref_id":"0030088"}}}


id: GO:0003368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix that contributes to the directed movement of a mesendodermal cell.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion involved in ameboidal cell migration","termid":"GO:0003366"},{"relation_name":"part_of","term_name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-matrix adhesion involved in mesendodermal cell migration","termid":"GO:0003368"}


id: PBO:0054500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1900","termid":"PBO:0054500"}


id: GO:0018935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrilotriacetate, the aminotricarboxylic acid N(CH2COO-)3, that occur in the presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilotriacetate metabolic process","termid":"GO:0018934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aerobic nitrilotriacetate metabolic process","synonyms":[{"name":"aerobic nitrilotriacetate metabolism","type":"exact"}],"termid":"GO:0018935"}


id: PBO:0081296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 76","termid":"PBO:0081296"}


id: PBO:0017733
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Christianson Syndrome","termid":"PBO:0017733"}


id: PBO:0029879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_silent_mating-type_cassette","termid":"PBO:0029879"}


id: PBO:0044938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7-dehydrocholesterol reductase","termid":"PBO:0044938"}


id: PBO:0051463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 10-67 (pseudogene)","termid":"PBO:0051463"}


id: PBO:0027862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_replication_during_cellular_response_to_DNA_damage","termid":"PBO:0027862"}


id: PBO:0053464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 426","termid":"PBO:0053464"}


id: PR:Q4PIR3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q4PIR3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 SUMO-protein ligase nse2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.06c","synonyms":[{"name":"Spom972h-nse2","type":"exact"},{"name":"non-SMC element 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-structural maintenance of chromosomes element 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q4PIR3"}


id: PBO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClC chloride channel (predicted)","termid":"PBO:0004232"}


id: PBO:0081419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 275","termid":"PBO:0081419"}


id: PBO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis, specifically","termid":"PBO:0004909"}


id: PBO:0077929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 2","termid":"PBO:0077929"}


id: FYPO:0004799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division does not occur during a cycle of zygotic meiosis and sporulation. Zygotic meiosis and sporulation take place under conditions of continuous nitrogen starvation, in which haploid cells of the opposite mating types conjugate to form diploid zygotes that proceed immediately to undergo meiosis and sporulation.","definition_xrefs":["PMID:22558440","PomBase:mah","PMID:25891897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis II","termid":"FYPO:0003379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abolished zygotic meiosis II","synonyms":[{"name":"abolished meiosis II during zygotic meiosis","type":"exact"},{"name":"abolished zygotic second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004799"}


id: FYPO:0002431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores of abnormal shape and vegetative cells of abnormal shape. The vegetative cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores with abnormal shape and cells with abnormal shape (obsolete FYPO:0002431)","termid":"FYPO:0002431"}


id: PBO:0113006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aromatic aminotransferase II; involved in tyrosine, phenylalanine, and methionine metabolism; involved with Aro8p in production of kynurenic acid to detoxify excess tryptophan","termid":"PBO:0113006"}


id: MONDO:0008176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone Paget disease","termid":"MONDO:0005382"},{"relation_name":"is_a","term_name":"SQSTM1-related multisystem proteinopathy","termid":"MONDO:0800464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"Paget disease of bone 3","secondary_identifiers":["DOID:0081366","MEDGEN:895927","UMLS:C4085252","OMIM:167250"],"synonyms":[{"name":"PDB3","type":"related"},{"name":"Paget disease of bone 3","type":"exact"},{"name":"Paget disease of bone type 3","type":"exact"},{"name":"Paget disease of bone, familial","type":"related"},{"name":"familial Paget disease of bone","type":"related"}],"termid":"MONDO:0008176","xrefs":{"Monarch":{"xref_id":"0008176"}}}


id: FYPO:0007245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the meiotic spindle pole bodies are normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal spindle pole body","termid":"FYPO:0005379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic spindle pole body","synonyms":[{"name":"normal meiotic SPB","type":"exact"},{"name":"normal spindle pole body during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007245"}


id: PBO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec20 (predicted)","termid":"PBO:0002369"}


id: PBO:0084394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA","termid":"PBO:0084394"}


id: FYPO:0004268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of septum disassembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum disassembly","termid":"FYPO:0000132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased septum disassembly","synonyms":[{"name":"decreased septum disassembly during mitotic cell cycle","type":"related"},{"name":"decreased septum disassembly during vegetative growth","type":"exact"},{"name":"reduced septum disassembly","type":"exact"}],"termid":"FYPO:0004268"}


id: PBO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK inhibitor Srw1","termid":"PBO:0002630"}


id: MONDO:0020213
data:
  {"annotated_genes":["SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007376"}]},"cv_name":"mondo","definition":"The stromal corneal dystrophies refer to a group of rare genetically determined corneal dystrophies (CDs) characterized by lesions affecting the corneal stroma, and variable effects on vision depending on the type of dystrophy.","definition_xrefs":["Orphanet:98626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"stromal corneal dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0038457","MEDGEN:20973","GARD:19519","DOID:0060442","icd11.foundation:1392780216","ICD9:371.56","SCTID:231931001"],"synonyms":[{"name":"corneal dystrophy (disease) of substantia propria of cornea","type":"exact"},{"name":"corneal stromal dystrophy","type":"exact"},{"name":"stromal dystrophy","type":"related"},{"name":"substantia propria of cornea corneal dystrophy (disease)","type":"exact"}],"termid":"MONDO:0020213","terms_by_termid":{"MONDO:0007376":null},"xrefs":{"Monarch":{"xref_id":"0020213"}}}


id: MONDO:0044685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"autoimmune/inflammatory optic neuropathy","secondary_identifiers":["Orphanet:499047","MEDGEN:1842963","GARD:22037","UMLS:C5681239"],"termid":"MONDO:0044685","xrefs":{"Monarch":{"xref_id":"0044685"}}}


id: PR:Q09184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferation-associated protein 2G4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10804:SF11","OMA:SCHPO00642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved DNA-binding protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.09","secondary_identifiers":["UniProtKB:Q09184"],"synonyms":[{"name":"42 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PA2G4","type":"exact"}],"termid":"PR:Q09184"}


id: SO:1000069
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, due to the deletion of two nucleotides.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000069 sequence_variant_causing_minus_2_frameshift (obsolete SO:1000069)","synonyms":[{"name":"minus 2 frameshift mutation","type":"exact"},{"name":"sequence variant causing minus 2 frameshift","type":"exact"}],"termid":"SO:1000069"}


id: GO:0033074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of the monoterpenoid pinene; alpha-pinene is (1S,5S)-2,6,6-trimethylbicyclo[3.1.1]hept-2-ene, and beta-pinene is (1S,5S)-6,6-dimethyl-2-methylenebicyclo[3.1.1]heptane.","definition_xrefs":["PMID:11452597","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinene metabolic process","termid":"GO:0033073"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pinene catabolic process","synonyms":[{"name":"pinene breakdown","type":"exact"},{"name":"pinene catabolism","type":"exact"},{"name":"pinene degradation","type":"exact"}],"termid":"GO:0033074"}


id: PBO:0042807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"competing endogenous lncRNA 1 for miR-4707-5p and miR-4767","termid":"PBO:0042807"}


id: PBO:0062077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 8 (gene/pseudogene)","termid":"PBO:0062077"}


id: MONDO:0968979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and seizures","secondary_identifiers":["MEDGEN:1857806","UMLS:C5935609","OMIM:620790"],"termid":"MONDO:0968979","xrefs":{"Monarch":{"xref_id":"0968979"}}}


id: GO:0050416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoyl-L-glutamate + H2O = N-formyl-L-glutamate + NH3.","definition_xrefs":["MetaCyc:FORMIMINOGLUTAMATE-DEIMINASE-RXN","EC:3.5.3.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"formimidoylglutamate deiminase activity","secondary_identifiers":["RHEA:22832"],"synonyms":[{"name":"N-formimidoyl-L-glutamate iminohydrolase activity","type":"related"},{"name":"formiminoglutamate deiminase activity","type":"exact"},{"name":"formiminoglutamic iminohydrolase activity","type":"related"}],"termid":"GO:0050416"}


id: PBO:0058559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6501","termid":"PBO:0058559"}


id: PBO:0017917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transport protein, tspO homolog (predicted)","termid":"PBO:0017917"}


id: PBO:0030715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glucosyltransferase_activity","termid":"PBO:0030715"}


id: PBO:0091084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSB-forming protein Rec12/Spo11","termid":"PBO:0091084"}


id: GO:0000405
data:
  {"annotated_genes":["SJAG_02200","SJAG_01076","SJAG_04933","SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95526,101264,113463,118813],"is_not":false,"summary":null,"term":"GO:0000405"}]},"cv_name":"molecular_function","definition":"Binding to DNA segment that contains a bubble. A bubble occurs when DNA contains a region of unpaired, single-stranded DNA flanked on both sides by regions of paired, double-stranded DNA.","definition_xrefs":["PMID:16781730","GOC:elh","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_02200":null,"SJAG_04671":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"bubble DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000405","terms_by_termid":{"GO:0000405":null}}


id: MONDO:0001473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloadrenal hyperfunction","secondary_identifiers":["MEDGEN:509543","SCTID:111565003","DOID:12257","ICD9:255.6","UMLS:C0154206"],"termid":"MONDO:0001473","xrefs":{"Monarch":{"xref_id":"0001473"}}}


id: PBO:0052659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 27","termid":"PBO:0052659"}


id: PBO:0076202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 12","termid":"PBO:0076202"}


id: PBO:0068916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 159, pseudogene","termid":"PBO:0068916"}


id: FYPO:0007321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly during vegetative growth","termid":"FYPO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased stress granule assembly during vegetative growth","synonyms":[{"name":"decreased cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"decreased stress granule assembly during mitotic cell cycle","type":"related"},{"name":"decreased stress granule formation during vegetative growth","type":"exact"},{"name":"reduced stress granule assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007321"}


id: GO:0051898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylinositol 3-kinase/protein kinase B signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction","termid":"GO:0051896"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"phosphatidylinositol 3-kinase/protein kinase B signal transduction","termid":"GO:0043491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction","synonyms":[{"name":"down regulation of protein kinase B signaling cascade","type":"related"},{"name":"down-regulation of protein kinase B signaling cascade","type":"related"},{"name":"downregulation of protein kinase B signaling cascade","type":"related"},{"name":"inhibition of protein kinase B signaling cascade","type":"narrow"},{"name":"negative regulation of AKT signaling cascade","type":"related"},{"name":"negative regulation of AKT signalling cascade","type":"related"},{"name":"negative regulation of PI3K-PKB/Akt pathway","type":"exact"},{"name":"negative regulation of PI3K/Akt signal transduction","type":"exact"},{"name":"negative regulation of PI3K/PKB signal transduction","type":"exact"},{"name":"negative regulation of PKB signaling cascade","type":"related"},{"name":"negative regulation of PKB signalling cascade","type":"related"},{"name":"negative regulation of phosphatidylinositol 3-kinase signaling/protein kinase B signal transduction","type":"exact"},{"name":"negative regulation of protein kinase B signaling","type":"related"},{"name":"negative regulation of protein kinase B signaling cascade","type":"related"},{"name":"negative regulation of protein kinase B signalling cascade","type":"related"}],"termid":"GO:0051898"}


id: PBO:0039673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 4 subunit mu 1","termid":"PBO:0039673"}


id: PBO:0091883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-sugar 4,6-dehydratase","termid":"PBO:0091883"}


id: GO:0009881
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[121477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009882"}]},"cv_name":"molecular_function","definition":"The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation.","definition_xrefs":["GOC:ai","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"photoreceptor activity","references_by_uniquename":{"PMID:23873862":null},"synonyms":[{"name":"UV-sensitive opsin","type":"narrow"},{"name":"blue-sensitive opsin","type":"narrow"},{"name":"green-sensitive opsin","type":"narrow"},{"name":"long-wave-sensitive opsin","type":"narrow"},{"name":"opsin","type":"narrow"},{"name":"red-sensitive opsin","type":"narrow"},{"name":"short-wave-sensitive opsin","type":"narrow"},{"name":"violet-sensitive opsin","type":"narrow"}],"termid":"GO:0009881","terms_by_termid":{"GO:0009882":null}}


id: GO:0048342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a paraxial mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"paraxial mesoderm formation","termid":"GO:0048341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell differentiation","termid":"GO:0048342"}


id: PBO:0066406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELA divergent transcript","termid":"PBO:0066406"}


id: GO:0003806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Arg-Ile bonds in factor VII to form factor VIIa and factor XI to form factor XIa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor XIIa activity (obsolete GO:0003806)","synonyms":[{"name":"activated beta blood-coagulation factor XII","type":"related"},{"name":"blood coagulation factor XII activity","type":"exact"},{"name":"blood-coagulation factor XIIabeta","type":"related"},{"name":"blood-coagulation factor XIIf","type":"related"},{"name":"coagulation factor XIIa activity","type":"exact"},{"name":"hageman factor (activated)","type":"related"},{"name":"hageman factor activity","type":"related"},{"name":"hageman factor beta-fragment","type":"related"},{"name":"hageman factor fragment HFf","type":"related"},{"name":"kallikreinogen activator","type":"related"},{"name":"prealbumin activator","type":"related"},{"name":"prekallikrein activator","type":"related"}],"termid":"GO:0003806"}


id: GO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process in which immunoglobulin genes are diversified through the mechanism of gene conversion following the induction of and contributing to an immune response.","definition_xrefs":["GOC:add","PMID:14991701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion of immunoglobulin genes","termid":"GO:0002206"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0010467","GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"gene conversion of immunoglobulin genes involved in immune response","synonyms":[{"name":"gene conversion of antibody genes during immune response","type":"related"},{"name":"gene conversion of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002207"}


id: PBO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 22","termid":"PBO:0044430"}


id: PBO:0069589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 863, pseudogene","termid":"PBO:0069589"}


id: PBO:0065362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1 pseudogene 3","termid":"PBO:0065362"}


id: MONDO:0008521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tarsal-carpal coalition syndrome is characterized by fusion of the carpals, tarsals, and phalanges.","definition_xrefs":["Orphanet:1412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"NOG-related symphalangism spectrum disorder","termid":"MONDO:0100521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"tarsal-carpal coalition syndrome","secondary_identifiers":["OMIM:186570","ICD9:756.9","GARD:9225","MEDGEN:348322","SCTID:702312009","icd11.foundation:1118132902","DOID:0050789","UMLS:C1861305"],"synonyms":[{"name":"TCC","type":"related"},{"name":"synostosis of talus and calcaneus with short stature","type":"related"},{"name":"tarsal carpal coalition syndrome","type":"related"},{"name":"tarsal-carpal coalition syndrome","type":"exact"}],"termid":"MONDO:0008521","xrefs":{"Monarch":{"xref_id":"0008521"}}}


id: PBO:0014297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator (predicted)","termid":"PBO:0014297"}


id: PR:O94375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rex4 gene.","definition_xrefs":["UniProtKB:O94375","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.09c","synonyms":[{"name":"Spom972h-rex4","type":"exact"}],"termid":"PR:O94375"}


id: PBO:0055252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2679","termid":"PBO:0055252"}


id: MONDO:1010638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor XI deficiency that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor XI deficiency, non-human animal","termid":"MONDO:1010073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor XI deficiency, cattle","secondary_identifiers":["OMIA:000363-9913"],"termid":"MONDO:1010638","xrefs":{"Monarch":{"xref_id":"1010638"}}}


id: PBO:0062740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 7 pseudogene","termid":"PBO:0062740"}


id: GO:1990046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Merging of two or more mitochondria within a cell to form a single compartment, as a result of a disturbance in cellular homeostasis.","definition_xrefs":["PMID:19360003","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial fusion","termid":"GO:0008053"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"stress-induced mitochondrial fusion","synonyms":[{"name":"SIMH","type":"narrow"},{"name":"mitochondrial fusion in response to stress","type":"related"},{"name":"stress-induced mitochondrial hyperfusion","type":"narrow"}],"termid":"GO:1990046"}


id: PBO:0064584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member E","termid":"PBO:0064584"}


id: MONDO:0000956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the small intestine.","definition_xrefs":["NCIT:C7523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"},{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"small intestine cancer","secondary_identifiers":["DOID:10154","MEDGEN:56300","ICD9:152.9","GARD:9385","UMLS:C0153425"],"synonyms":[{"name":"cancer of small intestine","type":"exact"},{"name":"malignant neoplasm of small bowel","type":"exact"},{"name":"malignant neoplasm of small intestine","type":"exact"},{"name":"malignant neoplasm of the small bowel","type":"exact"},{"name":"malignant neoplasm of the small intestine","type":"exact"},{"name":"malignant neoplasms of the small intestine","type":"related"},{"name":"malignant small bowel neoplasm","type":"exact"},{"name":"malignant small bowel tumor","type":"exact"},{"name":"malignant small bowel tumour","type":"exact"},{"name":"malignant small intestinal neoplasm","type":"exact"},{"name":"malignant small intestine neoplasm","type":"exact"},{"name":"malignant small intestine tumor","type":"exact"},{"name":"malignant small intestine tumour","type":"exact"},{"name":"malignant tumor of small bowel","type":"exact"},{"name":"malignant tumor of small intestine","type":"exact"},{"name":"malignant tumor of the small bowel","type":"exact"},{"name":"malignant tumor of the small intestine","type":"exact"},{"name":"malignant tumour of small bowel","type":"exact"},{"name":"malignant tumour of small intestine","type":"exact"},{"name":"malignant tumour of the small bowel","type":"exact"},{"name":"malignant tumour of the small intestine","type":"exact"},{"name":"small bowel tumors","type":"related"},{"name":"small bowel tumours","type":"related"},{"name":"small intestine cancer","type":"exact"}],"termid":"MONDO:0000956","xrefs":{"Monarch":{"xref_id":"0000956"}}}


id: GO:0015772
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[97648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of oligosaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligosaccharides are molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transport","termid":"GO:0008643"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"oligosaccharide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015772","terms_by_termid":{"GO:0106081":null,"GO:0106082":null}}


id: GO:2000228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic A cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of pancreatic A cell differentiation","termid":"GO:2000226"},{"relation_name":"positively_regulates","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic A cell differentiation","synonyms":[{"name":"positive regulation of pancreatic alpha cell differentiation","type":"exact"}],"termid":"GO:2000228"}


id: GO:0048448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the stamen are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"stamen development","termid":"GO:0048443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen morphogenesis","secondary_identifiers":["GO:0048426"],"termid":"GO:0048448"}


id: PBO:0069942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1235, pseudogene","termid":"PBO:0069942"}


id: GO:0007566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attachment of the blastocyst to the uterine lining.","definition_xrefs":["PMID:10882512","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"part_of","term_name":"female pregnancy","termid":"GO:0007565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo implantation","synonyms":[{"name":"blastocyst implantation","type":"exact"}],"termid":"GO:0007566"}


id: PBO:0073172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L family member 3","termid":"PBO:0073172"}


id: PBO:0067335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 428, pseudogene","termid":"PBO:0067335"}


id: FYPO:0006124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of peptidyl-arginine to form peptidyl-N(omega),N(omega)-dimethyl-L-arginine in one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal asymmetric protein arginine dimethylation during vegetative growth","synonyms":[{"name":"normal asymmetric protein arginine dimethylation during mitotic cell cycle","type":"related"},{"name":"normal peptidyl-arginine methylation, to asymmetrical-dimethyl arginine, during vegetative growth","type":"exact"}],"termid":"FYPO:0006124"}


id: GO:0007100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Separation of duplicated centrosome components at the beginning of mitosis. The centriole pair within each centrosome becomes part of a separate microtubule organizing center that nucleates a radial array of microtubules called an aster. The two asters move to opposite sides of the nucleus to form the two poles of the mitotic spindle.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centrosome separation","termid":"GO:0051299"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"mitotic centrosome separation","termid":"GO:0007100"}


id: MONDO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed, lobulated tumor, completely or partially covered by a fibrous capsule. It usually arises in the fingers. It is characterized by the presence of mononuclear cells, multinucleated osteoclast-like giant cells, hemosiderin-laden macrophages, foam cells, and an inflammatory infiltrate. The tumor is slow-growing, usually developing over several years. Clinical presentation includes painless edema of the affected site.","definition_xrefs":["NCIT:C6532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tenosynovial giant cell tumor","termid":"MONDO:0002522"},{"relation_name":"is_a","term_name":"benign synovial neoplasm","termid":"MONDO:0024715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenosynovial giant cell tumor, localized type","secondary_identifiers":["ICD9:727.02","MEDGEN:154413","UMLS:C0588125","DOID:2701","SCTID:95413004"],"synonyms":[{"name":"benign synovioma","type":"related"},{"name":"benign tumor of synovium","type":"related"},{"name":"benign tumour of synovium","type":"related"},{"name":"localised giant cell neoplasm of Tenosynovium","type":"exact"},{"name":"localised giant cell neoplasm of tendon sheath","type":"exact"},{"name":"localised giant cell neoplasm of the Tenosynovium","type":"exact"},{"name":"localised giant cell tumour of Tenosynovium","type":"exact"},{"name":"localised giant cell tumour of tendon sheath","type":"exact"},{"name":"localised giant cell tumour of the Tenosynovium","type":"exact"},{"name":"localised tenosynovial giant cell neoplasm","type":"exact"},{"name":"localised tenosynovial giant cell tumour","type":"exact"},{"name":"localized giant cell neoplasm of Tenosynovium","type":"exact"},{"name":"localized giant cell neoplasm of tendon sheath","type":"exact"},{"name":"localized giant cell neoplasm of the Tenosynovium","type":"exact"},{"name":"localized giant cell tumor of Tenosynovium","type":"exact"},{"name":"localized giant cell tumor of tendon sheath","type":"exact"},{"name":"localized giant cell tumor of the Tenosynovium","type":"exact"},{"name":"localized tenosynovial giant cell neoplasm","type":"exact"},{"name":"localized tenosynovial giant cell tumor","type":"exact"},{"name":"nodular tenosynovitis","type":"exact"},{"name":"synovioma, benign (morphologic abnormality)","type":"exact"},{"name":"tenosynovial giant cell tumor, localized type","type":"exact"}],"termid":"MONDO:0002399","xrefs":{"Monarch":{"xref_id":"0002399"}}}


id: MONDO:0019613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hormone producing or non-producing pituitary gland adenoma not associated with a hormonal syndrome.","definition_xrefs":["NCIT:C4348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-functioning pituitary gland neoplasm","termid":"MONDO:0003603"},{"relation_name":"is_a","term_name":"pituitary gland adenoma","termid":"MONDO:0006373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-functioning pituitary adenoma","secondary_identifiers":["icd11.foundation:1197752358","Orphanet:91349","EFO:0008516","SCTID:254962005","GARD:19159","ICD10CM:D35.2","DOID:5715"],"synonyms":[{"name":"NFPA","type":"exact"},{"name":"functionless adenoma of pituitary","type":"exact"},{"name":"functionless adenoma of pituitary gland","type":"exact"},{"name":"functionless adenoma of the pituitary","type":"exact"},{"name":"functionless adenoma of the pituitary gland","type":"exact"},{"name":"functionless pituitary adenoma","type":"exact"},{"name":"functionless pituitary gland adenoma","type":"exact"},{"name":"non-functioning adenoma of pituitary","type":"exact"},{"name":"non-functioning adenoma of pituitary gland","type":"exact"},{"name":"non-functioning adenoma of the pituitary","type":"exact"},{"name":"non-functioning adenoma of the pituitary gland","type":"exact"},{"name":"non-functioning pituitary adenoma","type":"exact"},{"name":"non-functioning pituitary gland adenoma","type":"exact"},{"name":"non-secretory adenoma of pituitary","type":"exact"},{"name":"non-secretory adenoma of pituitary gland","type":"exact"},{"name":"non-secretory adenoma of the pituitary","type":"exact"},{"name":"non-secretory adenoma of the pituitary gland","type":"exact"},{"name":"non-secretory pituitary adenoma","type":"exact"},{"name":"non-secretory pituitary gland adenoma","type":"exact"},{"name":"nonfunctional pituitary gland adenoma","type":"exact"},{"name":"silent pituitary gland adenoma","type":"exact"}],"termid":"MONDO:0019613","xrefs":{"Monarch":{"xref_id":"0019613"}}}


id: PR:G2TRK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1399.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1399.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.06","synonyms":[{"name":"Spom972h-SPAC1399.06","type":"exact"}],"termid":"PR:G2TRK4"}


id: GO:0102541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-D-galactose 6-phosphate = beta-D-galactose 6-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete D-galactose 6-phosphate 1-epimerase activity (obsolete GO:0102541)","termid":"GO:0102541"}


id: GO:0002088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus.","definition_xrefs":["ISBN:0582064333","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens development in camera-type eye","synonyms":[{"name":"lens development","type":"exact"},{"name":"lens development in camera-style eye","type":"exact"}],"termid":"GO:0002088"}


id: GO:0031120
data:
  {"annotated_genes":["SJAG_00083","SJAG_04754","SJAG_01234","SJAG_03572","SJAG_00566","SJAG_00319","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59458,61119,64928,79412,82110,108174,108237],"is_not":false,"summary":null,"term":"GO:0031120"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthesis","termid":"GO:0001522"},{"relation_name":"is_a","term_name":"snRNA modification","termid":"GO:0040031"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00088":null,"SJAG_00319":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_03572":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0016073","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"snRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0031120","terms_by_termid":{"GO:0031120":null}}


id: MONDO:0024650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteoporosis","termid":"MONDO:0005298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"drug-induced osteoporosis","secondary_identifiers":["UMLS:C0264115","icd11.foundation:691296096","ICD9:733.09","MEDGEN:538336","SCTID:14651005"],"synonyms":[{"name":"drug-induced osteoporosis","type":"exact"}],"termid":"MONDO:0024650","xrefs":{"Monarch":{"xref_id":"0024650"}}}


id: PBO:0032735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu43","termid":"PBO:0032735"}


id: PBO:0012254
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octameric","termid":"PBO:0012254"}


id: PR:Q9HE09
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fml2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HE09"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase fml2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.04","synonyms":[{"name":"FANCM-like protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fml2","type":"exact"}],"termid":"PR:Q9HE09"}


id: GO:0045459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 3Fe-4S iron-sulfur cluster via tetrakis-L-cysteinyl triiron tetrasulfide.","definition_xrefs":["PMID:11592901","RESID:AA0326"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tetrakis-L-cysteinyl triiron tetrasulfide (obsolete GO:0045459)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tetrakis-L-cysteinyl triiron tetrasulphide","type":"exact"}],"termid":"GO:0045459"}


id: MONDO:0007753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autonomic disorder characterized by excessive sweating of the forehead, upper lip, perioral region, or sternum subsequent to gustatory stimuli. The auriculotemporal syndrome features facial flushing or sweating limited to the distribution of the auriculotemporal nerve and may develop after trauma to the parotid gland, in association with parotid neoplasms, or following their surgical removal. (From Ann Neurol 1997 Dec;42(6):973-5)","definition_xrefs":["MESH:D013547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Frey syndrome","secondary_identifiers":["Orphanet:662240","DOID:11599","EFO:1000940","MEDGEN:21041","OMIM:144100","SCTID:238758008","UMLS:C0038994"],"synonyms":[{"name":"Baillarger syndrome","type":"exact"},{"name":"Frey syndrome","type":"exact"},{"name":"Frey's syndrome","type":"related"},{"name":"HYPRG","type":"related"},{"name":"auriculotemporal nerve syndrome","type":"related"},{"name":"gustatory hyperhidrosis","type":"exact"},{"name":"gustatory sweating","type":"exact"},{"name":"hyperhidrosis gustatory","type":"related"},{"name":"hyperhidrosis, gustatory","type":"related"}],"termid":"MONDO:0007753","xrefs":{"Monarch":{"xref_id":"0007753"}}}


id: GO:0003986
data:
  {"annotated_genes":["SJAG_02985","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77230,78577],"is_not":false,"summary":null,"term":"GO:0003986"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O = acetate + CoA + H+.","definition_xrefs":["RHEA:20289","EC:3.1.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"acetyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-390304","Reactome:R-HSA-2066779","MetaCyc:ACETYL-COA-HYDROLASE-RXN","KEGG_REACTION:R00227"],"synonyms":[{"name":"acetyl coenzyme A acylase activity","type":"related"},{"name":"acetyl coenzyme A deacylase activity","type":"related"},{"name":"acetyl coenzyme A hydrolase activity","type":"related"},{"name":"acetyl-CoA acylase activity","type":"related"},{"name":"acetyl-CoA deacylase activity","type":"related"},{"name":"acetyl-CoA thiol esterase activity","type":"related"}],"termid":"GO:0003986","terms_by_termid":{"GO:0003986":null}}


id: PBO:0050804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HtrA serine peptidase 4","termid":"PBO:0050804"}


id: GO:0061284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the mesonephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of mesonephric nephron tubule identity","termid":"GO:0061282"},{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"part_of","term_name":"mesonephric proximal tubule morphogenesis","termid":"GO:0061276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric proximal tubule identity","termid":"GO:0061284"}


id: FYPO:0001639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-methionine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular sulfur level","termid":"FYPO:0001544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular methionine level","synonyms":[{"name":"normal cellular L-methionine level","type":"exact"},{"name":"normal cellular methionine level during mitotic cell cycle","type":"related"},{"name":"normal cellular methionine level during vegetative growth","type":"exact"},{"name":"normal level of methionine in cell","type":"exact"}],"termid":"FYPO:0001639"}


id: MONDO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glomus tumor (obsolete MONDO:0002296)","termid":"MONDO:0002296","xrefs":{"Monarch":{"xref_id":"0002296"}}}


id: PBO:0058066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4285","termid":"PBO:0058066"}


id: PBO:0064037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 71","termid":"PBO:0064037"}


id: SO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The canonical 3' splice site has the sequence \\\"AG\\\".","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_cis_splice_site","termid":"SO:0000164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canonical_three_prime_splice_site","synonyms":[{"name":"canonical 3' splice site","type":"exact"},{"name":"canonical three prime splice site","type":"exact"}],"termid":"SO:0000676"}


id: GO:0042628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deposition of a plug of sperm or other gelatinous material into the opening of the vulva by a male at the termination of copulation. Probably acts to prevent subsequent matings by other males.","definition_xrefs":["PMID:11267893","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"insemination","termid":"GO:0007320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating plug formation","synonyms":[{"name":"copulatory plug biosynthesis","type":"exact"},{"name":"copulatory plug deposition","type":"exact"},{"name":"copulatory plug formation","type":"exact"},{"name":"mating plug deposition","type":"exact"}],"termid":"GO:0042628"}


id: PBO:0059682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 48","termid":"PBO:0059682"}


id: PBO:0088226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neddylation protein Dcn1","termid":"PBO:0088226"}


id: PBO:0043607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic oncogenic antisense to MET transcript","termid":"PBO:0043607"}


id: PBO:0047471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dendritic cell secreted protein","termid":"PBO:0047471"}


id: PBO:0066981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 284","termid":"PBO:0066981"}


id: MONDO:0700123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Variants in SMARCC1 cause a novel human syndrome characterized by developmental delay, cerebral ventriculomegaly and aqueductal stenosis, and other associated structural brain and cardiac defects.","direct_ancestors":[{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCC1-associated developmental dysgenesis syndrome","synonyms":[{"name":"SMARCC1-related BAFopathy","type":"exact"}],"termid":"MONDO:0700123","xrefs":{"Monarch":{"xref_id":"0700123"}}}


id: MONDO:0006140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, extremely well differentiated cervical mucinous adenocarcinoma in which most of the neoplastic glands cannot be distinguished from the normal endocervical glands.","definition_xrefs":["NCIT:C40206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical mucinous adenocarcinoma","termid":"MONDO:0002742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical mucinous adenocarcinoma, minimal deviation variant","secondary_identifiers":["DOID:6627","EFO:1000169","MEDGEN:273125","UMLS:C1516423"],"synonyms":[{"name":"cervical adenoma malignum","type":"exact"},{"name":"cervical mucinous adenocarcinoma, minimal deviation type","type":"exact"},{"name":"cervical mucinous adenocarcinoma, minimal deviation variant","type":"exact"}],"termid":"MONDO:0006140","xrefs":{"Monarch":{"xref_id":"0006140"}}}


id: MOD:00255
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-histidine residue and an L-tyrosine residue by a carbon-nitrogen bond to form 3-(3'-L-histidyl)-L-tyrosine.","definition_xrefs":["RESID:AA0250","PubMed:9144772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(3'-L-histidyl)-L-tyrosine","synonyms":[{"name":"(2S,3R)-2-amino-3-(5-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"3-(3'-L-histidyl)-L-tyrosine","type":"exact"},{"name":"3-(N3'-histidyl)tyrosine","type":"exact"},{"name":"3-(pi-histidyl)tyrosine","type":"exact"},{"name":"3-(pros-histidyl)tyrosine","type":"exact"},{"name":"CROSSLNK 3'-histidyl-3-tyrosine (His-Tyr)","type":"exact"},{"name":"beta-(N(delta)-histidyl)tyrosine","type":"exact"},{"name":"beta-(N3'-histidyl)tyrosine","type":"exact"}],"termid":"MOD:00255"}


id: GO:0031770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth hormone-releasing hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"growth hormone-releasing hormone receptor binding","synonyms":[{"name":"growth hormone-releasing hormone receptor ligand","type":"narrow"}],"termid":"GO:0031770"}


id: GO:0102622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: linuron + H2O = N,O-dimethylhydroxylamine + carbon dioxide + 3,4-dichloroaniline.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete linuron hydrolase activity (obsolete GO:0102622)","termid":"GO:0102622"}


id: MOD:00825
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-cysteine residue by a thioester bond to form S-(L-phenylalaninyl)-L-cysteine.","definition_xrefs":["RESID:AA0414","PubMed:12591958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-phenylalanyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-3-phenylpropanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Phenylalanyl cysteine thioester (Cys-Phe)","type":"exact"},{"name":"S-(2-amino-3-phenylpropanoyl)cysteine","type":"exact"},{"name":"S-(L-phenylalanyl)-L-cysteine","type":"exact"},{"name":"XLNK1PheSCys","type":"exact"},{"name":"phenylalanine cysteine thioester","type":"exact"}],"termid":"MOD:00825"}


id: GO:1901911
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81074],"is_not":false,"summary":null,"term":"GO:1901911"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of adenosine 5'-(hexahydrogen pentaphosphate).","definition_xrefs":["GOC:TermGenie","PMID:10090752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"adenosine 5'-(hexahydrogen pentaphosphate) metabolic process","termid":"GO:1901910"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"adenosine 5'-(hexahydrogen pentaphosphate) catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"adenosine 5'-(hexahydrogen pentaphosphate) breakdown","type":"exact"},{"name":"adenosine 5'-(hexahydrogen pentaphosphate) catabolism","type":"exact"},{"name":"adenosine 5'-(hexahydrogen pentaphosphate) degradation","type":"exact"}],"termid":"GO:1901911","terms_by_termid":{"GO:1901911":null}}


id: PBO:0061537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP2/Sun RNA methyltransferase 2","termid":"PBO:0061537"}


id: PBO:0044931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase kappa","termid":"PBO:0044931"}


id: GO:0048855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the adenohypophysis are generated and organized. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus.","definition_xrefs":["GOC:cvs","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"adenohypophysis development","termid":"GO:0021984"},{"relation_name":"part_of","term_name":"hypophysis morphogenesis","termid":"GO:0048850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adenohypophysis morphogenesis","synonyms":[{"name":"adenophysis morphogenesis","type":"exact"},{"name":"anterior pituitary gland morphogenesis","type":"exact"},{"name":"anterior pituitary morphogenesis","type":"exact"}],"termid":"GO:0048855"}


id: GO:0030249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of guanylate cyclase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase regulator activity","termid":"GO:0010851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"guanylate cyclase regulator activity","termid":"GO:0030249"}


