# genes

id: SJAG_00404
data:
  {"cv_annotations":{"biological_process":[{"annotations":[104845],"is_not":false,"summary":null,"term":"GO:0045039"}],"cellular_component":[{"annotations":[104844],"is_not":false,"summary":null,"term":"GO:0042721"}],"mondo":[{"annotations":[88146],"is_not":false,"summary":null,"term":"MONDO:0013859"},{"annotations":[87523],"is_not":false,"summary":null,"term":"MONDO:0008922"}]},"dbxrefs":["GOA:B6JVJ3","EnsemblGenomes-Gn:SJAG_00404","EnsemblGenomes-Tr:EEB05394","InterPro:IPR021056","UniProtKB/TrEMBL:B6JVJ3"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":227,"start":175}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pdp2","uniquename":"SJAG_00411"},{"uniquename":"SJAG_00410"},{"name":"gpd1","uniquename":"SJAG_00409"},{"name":"wss1","uniquename":"SJAG_00406"},{"name":"meu14","uniquename":"SJAG_00405"},{"name":"tim54","uniquename":"SJAG_00404"},{"name":"scj1","uniquename":"SJAG_00403"},{"name":"cki1","uniquename":"SJAG_00402"},{"name":"rex2","uniquename":"SJAG_00401"},{"name":"rnh202","uniquename":"SJAG_00400"},{"name":"cdc23","uniquename":"SJAG_00399"}],"genes_by_uniquename":{"HGNC:21869":null,"SJAG_00404":null,"SPBC1347.04":null,"YJL054W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Inner membrane protein import complex subunit Tim54","id":"PF11711","interpro_description":"Mitochondrial import inner membrane translocase subunit Tim54","interpro_id":"IPR021056","interpro_name":"Mt_import_IM_translocase_Tim54","locations":[{"end":339,"start":5}],"match_end":339,"match_start":5,"name":"Tim54"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":227,"start":175}],"match_end":227,"match_start":175,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":190,"start":181}],"match_end":190,"match_start":181,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3412287,"start_pos":3411223,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":217,"start":197}}],"name":"tim54","ortholog_annotations":[{"gene_uniquename":"SJAG_00404","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21869","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00404","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1347.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00404","ortholog_taxonid":4932,"ortholog_uniquename":"YJL054W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00404","ortholog_taxonid":4932,"ortholog_uniquename":"YJL054W","reference_uniquename":"PMID:26896847"}],"product":"TIM22 inner membrane protein insertion complex subunit Tim54","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["MONDO:0004069","GO:0005739","GO:0007005","MONDO:0005066","MONDO:0005328","GO:0061024","MONDO:0002525","MONDO:0005267"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0042721":null,"GO:0045039":null,"MONDO:0008922":null,"MONDO:0013859":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":30,"start":13}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00404.1"],"transcripts_by_uniquename":{"SJAG_00404.1":null},"uniprot_identifier":"B6JVJ3","uniquename":"SJAG_00404"}


id: SJAG_00405
data:
  {"cv_annotations":{"biological_process":[{"annotations":[104840],"is_not":false,"summary":null,"term":"GO:0031322"},{"annotations":[79485],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[104842],"is_not":false,"summary":null,"term":"GO:0140043"}],"cellular_component":[{"annotations":[104837],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[104838],"is_not":false,"summary":null,"term":"GO:0070056"},{"annotations":[104839],"is_not":false,"summary":null,"term":"GO:0070057"}],"molecular_function":[{"annotations":[79484],"is_not":false,"summary":null,"term":"GO:0008289"}]},"dbxrefs":["InterPro:IPR028245","UniProtKB/TrEMBL:B6JVJ4","EnsemblGenomes-Tr:EEB05395","EnsemblGenomes-Gn:SJAG_00405","GOA:B6JVJ4","InterPro:IPR027267"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":277,"start":253}},{"range":{"end":370,"start":338}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"arg4","uniquename":"SJAG_00412"},{"name":"pdp2","uniquename":"SJAG_00411"},{"uniquename":"SJAG_00410"},{"name":"gpd1","uniquename":"SJAG_00409"},{"name":"wss1","uniquename":"SJAG_00406"},{"name":"meu14","uniquename":"SJAG_00405"},{"name":"tim54","uniquename":"SJAG_00404"},{"name":"scj1","uniquename":"SJAG_00403"},{"name":"cki1","uniquename":"SJAG_00402"},{"name":"rex2","uniquename":"SJAG_00401"},{"name":"rnh202","uniquename":"SJAG_00400"}],"genes_by_uniquename":{"SJAG_00405":null,"SPBC1347.03":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Eisosome component PIL1","id":"PF13805","interpro_description":"Eisosome component PIL1/LSP1","interpro_id":"IPR028245","interpro_name":"PIL1/LSP1","locations":[{"end":241,"start":33}],"match_end":241,"match_start":33,"name":"Pil1"},{"dbname":"GENE3D","id":"G3DSA:1.20.1270.60","interpro_description":"AH/BAR domain superfamily","interpro_id":"IPR027267","interpro_name":"AH/BAR_dom_sf","locations":[{"end":245,"start":33}],"match_end":245,"match_start":33,"name":"Arfaptin homology (AH) domain/BAR domain"},{"dbname":"PANTHER","id":"PTHR31962","interpro_description":"Eisosome component PIL1/LSP1","interpro_id":"IPR028245","interpro_name":"PIL1/LSP1","locations":[{"end":287,"start":1}],"match_end":287,"match_start":1,"name":"SPHINGOLIPID LONG CHAIN BASE-RESPONSIVE PROTEIN PIL1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":277,"start":253},{"end":370,"start":338}],"match_end":370,"match_start":253,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":267,"start":257},{"end":353,"start":343}],"match_end":353,"match_start":257,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":370,"start":361}],"match_end":370,"match_start":361,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3410660,"start_pos":3409471,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":204,"start":190}}],"name":"meu14","ortholog_annotations":[{"gene_uniquename":"SJAG_00405","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1347.03","reference_uniquename":"PMID:21511999"}],"product":"sporulation specific PIL domain protein Meu14","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008289"]}},"subset_termids":["GO:0005628","GO:0030437","GO:0015630","GO:0005816","GO:0000226","GO:0008289","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006897":null,"GO:0008289":null,"GO:0031322":null,"GO:0035974":null,"GO:0070056":null,"GO:0070057":null,"GO:0140043":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00405.1"],"transcripts_by_uniquename":{"SJAG_00405.1":null},"uniprot_identifier":"B6JVJ4","uniquename":"SJAG_00405"}


id: SJAG_00406
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100200],"is_not":false,"summary":null,"term":"GO:0106300"},{"annotations":[100201],"is_not":false,"summary":null,"term":"GO:0019985"}],"cellular_component":[{"annotations":[100199],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[100202],"is_not":false,"summary":null,"term":"GO:0004222"},{"annotations":[100203],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR013536","EnsemblGenomes-Gn:SJAG_00406","EnsemblGenomes-Tr:EEB05396","UniProtKB/TrEMBL:B6JVJ5"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":275,"start":177}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"erg10","uniquename":"SJAG_00413"},{"name":"arg4","uniquename":"SJAG_00412"},{"name":"pdp2","uniquename":"SJAG_00411"},{"uniquename":"SJAG_00410"},{"name":"gpd1","uniquename":"SJAG_00409"},{"name":"wss1","uniquename":"SJAG_00406"},{"name":"meu14","uniquename":"SJAG_00405"},{"name":"tim54","uniquename":"SJAG_00404"},{"name":"scj1","uniquename":"SJAG_00403"},{"name":"cki1","uniquename":"SJAG_00402"},{"name":"rex2","uniquename":"SJAG_00401"}],"genes_by_uniquename":{"SJAG_00406":null,"SPAC521.02":null,"YHR134W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WLM domain","id":"PF08325","interpro_description":"WLM domain","interpro_id":"IPR013536","interpro_name":"WLM_dom","locations":[{"end":191,"start":15}],"match_end":191,"match_start":15,"name":"WLM"},{"dbname":"PROSITE_PROFILES","description":"WLM domain profile.","id":"PS51397","interpro_description":"WLM domain","interpro_id":"IPR013536","interpro_name":"WLM_dom","locations":[{"end":194,"start":6}],"match_end":194,"match_start":6,"name":"WLM"},{"dbname":"PANTHER","id":"PTHR46622","interpro_description":"DNA-dependent metalloprotease WSS1-like","interpro_id":"IPR053000","interpro_name":"WSS1-like_metalloprotease","locations":[{"end":261,"start":6}],"match_end":261,"match_start":6,"name":"DNA-DEPENDENT METALLOPROTEASE WSS1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":275,"start":177}],"match_end":275,"match_start":177,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":239,"start":227},{"end":263,"start":252}],"match_end":263,"match_start":227,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":222,"start":212},{"end":275,"start":266}],"match_end":275,"match_start":212,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3409103,"start_pos":3408276,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":183,"start":177}},{"range":{"end":208,"start":190}}],"name":"wss1","ortholog_annotations":[{"gene_uniquename":"SJAG_00406","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC521.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00406","ortholog_taxonid":4932,"ortholog_uniquename":"YHR134W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00406","ortholog_taxonid":4932,"ortholog_uniquename":"YHR134W","reference_uniquename":"PMID:26896847"}],"product":"DNA repair WLM domain metallopeptidase Wss1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0004222"]}},"subset_termids":["GO:0008233","GO:0140096","GO:0005634","GO:0006281"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004222":null,"GO:0005634":null,"GO:0008270":null,"GO:0019985":null,"GO:0106300":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00406.1"],"transcripts_by_uniquename":{"SJAG_00406.1":null},"uniprot_identifier":"B6JVJ5","uniquename":"SJAG_00406"}


id: SJAG_00409
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":230,"start":230}}],"alleles_by_uniquename":{"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"}},"binding_sites":[{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":32,"start":27}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":59,"start":59}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":119,"start":119}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":142,"start":142}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":175,"start":175}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":295,"start":294}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":294,"start":294}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":323,"start":323}}],"cv_annotations":{"biological_process":[{"annotations":[108449],"is_not":false,"summary":null,"term":"GO:0071470"},{"annotations":[63831],"is_not":false,"summary":null,"term":"GO:0006114"},{"annotations":[63824],"is_not":false,"summary":null,"term":"GO:0046168"}],"cellular_component":[{"annotations":[76667],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[76666],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[63827],"is_not":false,"summary":null,"term":"GO:0141152"},{"annotations":[63826],"is_not":false,"summary":null,"term":"GO:0051287"}],"mondo":[{"annotations":[86893],"is_not":false,"summary":null,"term":"MONDO:0012728"},{"annotations":[88492],"is_not":false,"summary":null,"term":"MONDO:0013771"}],"single_locus_phenotype":[{"annotations":[121525],"is_not":false,"summary":null,"term":"FYPO:0000026"},{"annotations":[121524],"is_not":false,"summary":null,"term":"FYPO:0001355"},{"annotations":[121526],"is_not":false,"summary":null,"term":"FYPO:0001489"}]},"dbxrefs":["InterPro:IPR011128","EnsemblGenomes-Tr:EEB05397","InterPro:IPR013328","GOA:B6JVJ6","InterPro:IPR008927","UniProtKB/TrEMBL:B6JVJ6","EnsemblGenomes-Gn:SJAG_00409","InterPro:IPR017751","InterPro:IPR036291","InterPro:IPR006109","InterPro:IPR006168"],"deletion_viability":"viable","feature_publications":[{"reference_uniquename":"PMID:37164017","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cwf10","uniquename":"SJAG_00414"},{"name":"erg10","uniquename":"SJAG_00413"},{"name":"arg4","uniquename":"SJAG_00412"},{"name":"pdp2","uniquename":"SJAG_00411"},{"uniquename":"SJAG_00410"},{"name":"gpd1","uniquename":"SJAG_00409"},{"name":"wss1","uniquename":"SJAG_00406"},{"name":"meu14","uniquename":"SJAG_00405"},{"name":"tim54","uniquename":"SJAG_00404"},{"name":"scj1","uniquename":"SJAG_00403"},{"name":"cki1","uniquename":"SJAG_00402"}],"genes_by_uniquename":{"HGNC:28956":null,"HGNC:4455":null,"SJAG_00409":null,"SPBC215.05":null,"YDL022W":null,"YOL059W":null},"genotypes_by_uniquename":{"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus","id":"PF07479","interpro_description":"Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal","interpro_id":"IPR006109","interpro_name":"G3P_DH_NAD-dep_C","locations":[{"end":364,"start":219}],"match_end":364,"match_start":219,"name":"NAD_Gly3P_dh_C"},{"dbname":"PFAM","description":"NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus","id":"PF01210","interpro_description":"Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal","interpro_id":"IPR011128","interpro_name":"G3P_DH_NAD-dep_N","locations":[{"end":191,"start":23}],"match_end":191,"match_start":23,"name":"NAD_Gly3P_dh_N"},{"dbname":"PRINTS","description":"NAD-dependent glycerol-3-phosphate dehydrogenase signature","id":"PR00077","interpro_description":"Glycerol-3-phosphate dehydrogenase, NAD-dependent","interpro_id":"IPR006168","interpro_name":"G3P_DH_NAD-dep","locations":[{"end":42,"start":25},{"end":119,"start":92},{"end":188,"start":168},{"end":261,"start":212},{"end":296,"start":279}],"match_end":296,"match_start":25,"name":"GPDHDRGNASE"},{"dbname":"FUNFAM","description":"Glycerol-3-phosphate dehydrogenase [NAD(+)]","id":"G3DSA:1.10.1040.10:FF:000004","locations":[{"end":371,"start":219}],"match_end":371,"match_start":219},{"dbname":"FUNFAM","description":"Glycerol-3-phosphate dehydrogenase [NAD(+)]","id":"G3DSA:3.40.50.720:FF:000365","locations":[{"end":218,"start":16}],"match_end":218,"match_start":16},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":219,"start":20}],"match_end":219,"match_start":20,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"SUPERFAMILY","id":"SSF48179","interpro_description":"6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily","interpro_id":"IPR008927","interpro_name":"6-PGluconate_DH-like_C_sf","locations":[{"end":372,"start":218}],"match_end":372,"match_start":218,"name":"6-phosphogluconate dehydrogenase C-terminal domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":218,"start":14}],"match_end":218,"match_start":14},{"dbname":"GENE3D","id":"G3DSA:1.10.1040.10","interpro_description":"6-phosphogluconate dehydrogenase, domain 2","interpro_id":"IPR013328","interpro_name":"6PGD_dom2","locations":[{"end":371,"start":219}],"match_end":371,"match_start":219},{"dbname":"PANTHER","id":"PTHR11728","locations":[{"end":369,"start":19}],"match_end":369,"match_start":19,"name":"GLYCEROL-3-PHOSPHATE DEHYDROGENASE"},{"dbname":"PIRSF","id":"PIRSF000114","interpro_description":"Glycerol-3-phosphate dehydrogenase, NAD-dependent","interpro_id":"IPR006168","interpro_name":"G3P_DH_NAD-dep","locations":[{"end":375,"start":17}],"match_end":375,"match_start":17,"name":"Glycerol-3-P_dh"},{"dbname":"NCBIFAM","description":"glycerol-3-phosphate dehydrogenase (NAD(+))","id":"TIGR03376","interpro_description":"Glycerol-3-phosphate dehydrogenase, NAD-dependent, eukaryotic","interpro_id":"IPR017751","interpro_name":"G3P_DH_NAD-dep_euk","locations":[{"end":366,"start":23}],"match_end":366,"match_start":23,"name":"glycerol3P_DH"}],"location":{"chromosome_name":"supercont5.1","end_pos":3405741,"start_pos":3404584,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":323,"start":305}},{"range":{"end":382,"start":371}}],"name":"gpd1","ortholog_annotations":[{"gene_uniquename":"SJAG_00409","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28956","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00409","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4455","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00409","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC215.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00409","ortholog_taxonid":4932,"ortholog_uniquename":"YDL022W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00409","ortholog_taxonid":4932,"ortholog_uniquename":"YOL059W","reference_uniquename":"PMID:29761456"}],"product":"glycerol-3-phosphate dehydrogenase Gpd1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:37164017":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051287"],"not-binding":["GO:0141152"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0000026","FYPO:0001489"],"population_phenotype":["FYPO:0001355"]}},"subset_termids":["FYPO:0001320","MONDO:0004335","GO:0016491","FYPO:0000139","FYPO:0002058","GO:0005829","FYPO:0005568","GO:0005975","MONDO:0005267","GO:0005634","MONDO:0002515"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYPO:0000026":null,"FYPO:0001355":null,"FYPO:0001489":null,"FYPO_EXT:0000001":null,"GO:0005634":null,"GO:0005829":null,"GO:0006114":null,"GO:0046168":null,"GO:0051287":null,"GO:0071470":null,"GO:0141152":null,"MONDO:0012728":null,"MONDO:0013771":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00409.1"],"transcripts_by_uniquename":{"SJAG_00409.1":null},"uniprot_identifier":"B6JVJ6","uniquename":"SJAG_00409"}


id: SJAG_00410
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76079],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[76077],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[76076],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[76078],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[108459],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[62997],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05398","EnsemblGenomes-Gn:SJAG_00410","InterPro:IPR039999","InterPro:IPR036236","GOA:B6JVJ7","InterPro:IPR014898","UniProtKB/TrEMBL:B6JVJ7"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":135,"start":61}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mtl3","uniquename":"SJAG_00415"},{"name":"cwf10","uniquename":"SJAG_00414"},{"name":"erg10","uniquename":"SJAG_00413"},{"name":"arg4","uniquename":"SJAG_00412"},{"name":"pdp2","uniquename":"SJAG_00411"},{"uniquename":"SJAG_00410"},{"name":"gpd1","uniquename":"SJAG_00409"},{"name":"wss1","uniquename":"SJAG_00406"},{"name":"meu14","uniquename":"SJAG_00405"},{"name":"tim54","uniquename":"SJAG_00404"},{"name":"scj1","uniquename":"SJAG_00403"}],"genes_by_uniquename":{"HGNC:26021":null,"SJAG_00410":null,"SPBC215.06c":null,"YCR087C-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"LYAR-type C2HC zinc finger","id":"PF08790","interpro_description":"Zinc finger, C2H2, LYAR-type","interpro_id":"IPR014898","interpro_name":"Znf_C2H2_LYAR","locations":[{"end":57,"start":30}],"match_end":57,"match_start":30,"name":"zf-LYAR"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger C2HC LYAR-type profile.","id":"PS51804","locations":[{"end":51,"start":1}],"match_end":51,"match_start":1,"name":"ZF_C2HC_LYAR"},{"dbname":"FUNFAM","description":"cell growth-regulating nucleolar protein-like","id":"G3DSA:3.30.1490.490:FF:000001","locations":[{"end":50,"start":1}],"match_end":50,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF57667","interpro_description":"Zinc finger C2H2 superfamily","interpro_id":"IPR036236","interpro_name":"Znf_C2H2_sf","locations":[{"end":27,"start":1},{"end":58,"start":29}],"match_end":58,"match_start":1,"name":"beta-beta-alpha zinc fingers"},{"dbname":"GENE3D","id":"G3DSA:3.30.1490.490","locations":[{"end":50,"start":1}],"match_end":50,"match_start":1},{"dbname":"PANTHER","id":"PTHR13100","interpro_description":"Cell growth-regulating nucleolar protein","interpro_id":"IPR039999","interpro_name":"LYAR","locations":[{"end":79,"start":1}],"match_end":79,"match_start":1,"name":"CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":135,"start":61}],"match_end":135,"match_start":61,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":131,"start":90}],"match_end":131,"match_start":90,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3403719,"start_pos":3403153,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":78,"start":65}},{"range":{"end":121,"start":90}},{"range":{"end":165,"start":147}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00410","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26021","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00410","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC215.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00410","ortholog_taxonid":4932,"ortholog_uniquename":"YCR087C-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00410","ortholog_taxonid":4932,"ortholog_uniquename":"YCR087C-A","reference_uniquename":"PMID:26896847"}],"product":"nucleolar RNA-binding protein, human LYAR homolog, involved in rRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677","GO:0003723","GO:0008270"]}},"subset_termids":["GO:0006351","GO:0042254","GO:0005730","GO:0006355","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0003677":null,"GO:0003723":null,"GO:0005730":null,"GO:0006364":null,"GO:0008270":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00410.1"],"transcripts_by_uniquename":{"SJAG_00410.1":null},"uniprot_identifier":"B6JVJ7","uniquename":"SJAG_00410"}


id: SJAG_00411
data:
  {"coiled_coil_coords":[{"range":{"end":248,"start":221}}],"cv_annotations":{"biological_process":[{"annotations":[108463],"is_not":false,"summary":null,"term":"GO:0006338"}],"cellular_component":[{"annotations":[108461],"is_not":false,"summary":null,"term":"GO:0033100"},{"annotations":[108462],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVJ8","EnsemblGenomes-Gn:SJAG_00411","EnsemblGenomes-Tr:EEB05399","InterPro:IPR000313"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":111,"start":1}},{"range":{"end":351,"start":205}},{"range":{"end":567,"start":448}},{"range":{"end":591,"start":572}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps20","uniquename":"SJAG_00416"},{"name":"mtl3","uniquename":"SJAG_00415"},{"name":"cwf10","uniquename":"SJAG_00414"},{"name":"erg10","uniquename":"SJAG_00413"},{"name":"arg4","uniquename":"SJAG_00412"},{"name":"pdp2","uniquename":"SJAG_00411"},{"uniquename":"SJAG_00410"},{"name":"gpd1","uniquename":"SJAG_00409"},{"name":"wss1","uniquename":"SJAG_00406"},{"name":"meu14","uniquename":"SJAG_00405"},{"name":"tim54","uniquename":"SJAG_00404"}],"genes_by_uniquename":{"SJAG_00411":null,"SPBC215.07c":null,"YLR455W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PWWP domain","id":"PF00855","interpro_description":"PWWP domain","interpro_id":"IPR000313","interpro_name":"PWWP_dom","locations":[{"end":203,"start":115}],"match_end":203,"match_start":115,"name":"PWWP"},{"dbname":"CDD","description":"PWWP_ScIOC4-like","id":"cd05840","interpro_description":"IOC4-like, PWWP domain","interpro_id":"IPR035503","interpro_name":"IOC4-like_PWWP","locations":[{"end":205,"start":115}],"match_end":205,"match_start":115,"name":"PWWP_ScIOC4-like"},{"dbname":"PROSITE_PROFILES","description":"PWWP domain profile.","id":"PS50812","interpro_description":"PWWP domain","interpro_id":"IPR000313","interpro_name":"PWWP_dom","locations":[{"end":178,"start":114}],"match_end":178,"match_start":114,"name":"PWWP"},{"dbname":"SMART","id":"SM00293","interpro_description":"PWWP domain","interpro_id":"IPR000313","interpro_name":"PWWP_dom","locations":[{"end":176,"start":112}],"match_end":176,"match_start":112,"name":"PWWP_4"},{"dbname":"SUPERFAMILY","id":"SSF63748","locations":[{"end":207,"start":110}],"match_end":207,"match_start":110,"name":"Tudor/PWWP/MBT"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.140","locations":[{"end":213,"start":107}],"match_end":213,"match_start":107},{"dbname":"PANTHER","id":"PTHR35711","locations":[{"end":313,"start":36}],"match_end":313,"match_start":36,"name":"EXPRESSED PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":248,"start":221}],"match_end":248,"match_start":221,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":111,"start":1},{"end":351,"start":205},{"end":567,"start":448},{"end":591,"start":572}],"match_end":591,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":549,"start":528}],"match_end":549,"match_start":528,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":247,"start":215},{"end":307,"start":294}],"match_end":307,"match_start":215,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":519,"start":504}],"match_end":519,"match_start":504,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":111,"start":41},{"end":351,"start":320},{"end":503,"start":479}],"match_end":503,"match_start":41,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3402478,"start_pos":3400703,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":72,"start":49}},{"range":{"end":247,"start":213}},{"range":{"end":289,"start":250}},{"range":{"end":307,"start":295}},{"range":{"end":495,"start":473}},{"range":{"end":548,"start":527}}],"name":"pdp2","ortholog_annotations":[{"gene_uniquename":"SJAG_00411","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC215.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00411","ortholog_taxonid":4932,"ortholog_uniquename":"YLR455W","reference_uniquename":"PMID:29761456"}],"product":"PWWP domain protein Pdp2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005694","GO:0006325"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0006338":null,"GO:0033100":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00411.1"],"transcripts_by_uniquename":{"SJAG_00411.1":null},"uniprot_identifier":"B6JVJ8","uniquename":"SJAG_00411"}


id: SJAG_00412
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108467],"is_not":false,"summary":null,"term":"GO:0042450"},{"annotations":[108468],"is_not":false,"summary":null,"term":"GO:0000050"}],"cellular_component":[{"annotations":[108464],"is_not":false,"summary":null,"term":"GO:0005951"},{"annotations":[108465],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[59000],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[73062],"is_not":false,"summary":null,"term":"GO:0004087"},{"annotations":[108471],"is_not":false,"summary":null,"term":"GO:0004088"},{"annotations":[59001],"is_not":false,"summary":null,"term":"GO:0046872"}],"mondo":[{"annotations":[86894],"is_not":false,"summary":null,"term":"MONDO:0009376"},{"annotations":[89136],"is_not":false,"summary":null,"term":"MONDO:0014151"}]},"dbxrefs":["InterPro:IPR016185","InterPro:IPR036897","InterPro:IPR036914","GOA:B6JVJ9","InterPro:IPR000436","InterPro:IPR005480","UniProtKB/TrEMBL:B6JVJ9","InterPro:IPR005483","EnsemblGenomes-Gn:SJAG_00412","EnsemblGenomes-Tr:EEB05400","InterPro:IPR005479","InterPro:IPR011761","InterPro:IPR011607","InterPro:IPR013815"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_06595"},{"name":"vps20","uniquename":"SJAG_00416"},{"name":"mtl3","uniquename":"SJAG_00415"},{"name":"cwf10","uniquename":"SJAG_00414"},{"name":"erg10","uniquename":"SJAG_00413"},{"name":"arg4","uniquename":"SJAG_00412"},{"name":"pdp2","uniquename":"SJAG_00411"},{"uniquename":"SJAG_00410"},{"name":"gpd1","uniquename":"SJAG_00409"},{"name":"wss1","uniquename":"SJAG_00406"},{"name":"meu14","uniquename":"SJAG_00405"}],"genes_by_uniquename":{"HGNC:2323":null,"SJAG_00412":null,"SPBC215.08c":null,"YJR109C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Carbamoyl-phosphate synthetase large chain, oligomerisation domain","id":"PF02787","interpro_description":"Carbamoyl-phosphate synthetase, large subunit oligomerisation domain","interpro_id":"IPR005480","interpro_name":"CarbamoylP_synth_lsu_oligo","locations":[{"end":541,"start":461}],"match_end":541,"match_start":461,"name":"CPSase_L_D3"},{"dbname":"PFAM","description":"Carbamoyl-phosphate synthase L chain, ATP binding domain","id":"PF02786","interpro_description":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_id":"IPR005479","interpro_name":"CbamoylP_synth_lsu-like_ATP-bd","locations":[{"end":292,"start":216},{"end":376,"start":300},{"end":915,"start":709}],"match_end":915,"match_start":216,"name":"CPSase_L_D2"},{"dbname":"CDD","description":"MGS_CPS_I_III","id":"cd01423","locations":[{"end":1093,"start":988}],"match_end":1093,"match_start":988,"name":"MGS_CPS_I_III"},{"dbname":"CDD","description":"CCP","id":"cd00033","interpro_description":"Sushi/SCR/CCP domain","interpro_id":"IPR000436","interpro_name":"Sushi_SCR_CCP_dom","locations":[{"end":632,"start":594}],"match_end":632,"match_start":594,"name":"CCP"},{"dbname":"PROSITE_PATTERNS","description":"Carbamoyl-phosphate synthase subdomain signature 2.","id":"PS00867","interpro_description":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_id":"IPR005479","interpro_name":"CbamoylP_synth_lsu-like_ATP-bd","locations":[{"end":346,"start":339},{"end":888,"start":881}],"match_end":888,"match_start":339,"name":"CPSASE_2"},{"dbname":"PROSITE_PATTERNS","description":"Carbamoyl-phosphate synthase subdomain signature 1.","id":"PS00866","interpro_description":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_id":"IPR005479","interpro_name":"CbamoylP_synth_lsu-like_ATP-bd","locations":[{"end":266,"start":252},{"end":759,"start":745}],"match_end":759,"match_start":252,"name":"CPSASE_1"},{"dbname":"PROSITE_PROFILES","description":"ATP-grasp fold profile.","id":"PS50975","interpro_description":"ATP-grasp fold","interpro_id":"IPR011761","interpro_name":"ATP-grasp","locations":[{"end":266,"start":221},{"end":370,"start":307},{"end":912,"start":714}],"match_end":912,"match_start":221,"name":"ATP_GRASP"},{"dbname":"PROSITE_PROFILES","description":"MGS-like domain profile.","id":"PS51855","interpro_description":"Methylglyoxal synthase-like domain","interpro_id":"IPR011607","interpro_name":"MGS-like_dom","locations":[{"end":1125,"start":980}],"match_end":1125,"match_start":980,"name":"MGS"},{"dbname":"SMART","id":"SM00851","interpro_description":"Methylglyoxal synthase-like domain","interpro_id":"IPR011607","interpro_name":"MGS-like_dom","locations":[{"end":1083,"start":997}],"match_end":1083,"match_start":997,"name":"MGS_2a"},{"dbname":"SMART","id":"SM01096","interpro_description":"Carbamoyl-phosphate synthetase, large subunit oligomerisation domain","interpro_id":"IPR005480","interpro_name":"CarbamoylP_synth_lsu_oligo","locations":[{"end":583,"start":458}],"match_end":583,"match_start":458,"name":"CPSase_L_D3_2"},{"dbname":"PRINTS","description":"Carbamoyl-phosphate synthase protein CPSase domain signature","id":"PR00098","interpro_description":"Carbamoyl-phosphate synthase large subunit, CPSase domain","interpro_id":"IPR005483","interpro_name":"CbamoylP_synth_lsu_CPSase_dom","locations":[{"end":620,"start":606},{"end":645,"start":635},{"end":761,"start":749},{"end":804,"start":785},{"end":836,"start":819},{"end":910,"start":881},{"end":973,"start":955}],"match_end":973,"match_start":606,"name":"CPSASE"},{"dbname":"FUNFAM","description":"Carbamoyl-phosphate synthase large chain","id":"G3DSA:3.40.50.20:FF:000001","locations":[{"end":204,"start":90}],"match_end":204,"match_start":90},{"dbname":"FUNFAM","description":"Carbamoyl-phosphate synthase large chain","id":"G3DSA:3.30.1490.20:FF:000001","locations":[{"end":791,"start":722}],"match_end":791,"match_start":722},{"dbname":"FUNFAM","description":"Carbamoyl-phosphate synthase arginine-specific large chain","id":"G3DSA:3.40.50.1380:FF:000015","locations":[{"end":1114,"start":982}],"match_end":1114,"match_start":982},{"dbname":"FUNFAM","description":"Carbamoyl-phosphate synthase large chain","id":"G3DSA:3.40.50.20:FF:000002","locations":[{"end":698,"start":590}],"match_end":698,"match_start":590},{"dbname":"FUNFAM","description":"Carbamoyl-phosphate synthase large chain","id":"G3DSA:1.10.1030.10:FF:000001","locations":[{"end":588,"start":445}],"match_end":588,"match_start":445},{"dbname":"FUNFAM","description":"Carbamoyl-phosphate synthase (glutamine-hydrolyzing)","id":"G3DSA:3.30.470.20:FF:000004","locations":[{"end":973,"start":781}],"match_end":973,"match_start":781},{"dbname":"SUPERFAMILY","id":"SSF52335","interpro_description":"Methylglyoxal synthase-like domain superfamily","interpro_id":"IPR036914","interpro_name":"MGS-like_dom_sf","locations":[{"end":1097,"start":991}],"match_end":1097,"match_start":991,"name":"Methylglyoxal synthase-like"},{"dbname":"SUPERFAMILY","id":"SSF52440","interpro_description":"Pre-ATP-grasp domain superfamily","interpro_id":"IPR016185","interpro_name":"PreATP-grasp_dom_sf","locations":[{"end":214,"start":92},{"end":711,"start":592}],"match_end":711,"match_start":92,"name":"PreATP-grasp domain"},{"dbname":"SUPERFAMILY","id":"SSF56059","locations":[{"end":441,"start":216},{"end":976,"start":709}],"match_end":976,"match_start":216,"name":"Glutathione synthetase ATP-binding domain-like"},{"dbname":"SUPERFAMILY","id":"SSF48108","interpro_description":"Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily","interpro_id":"IPR036897","interpro_name":"CarbamoylP_synth_lsu_oligo_sf","locations":[{"end":590,"start":437}],"match_end":590,"match_start":437,"name":"Carbamoyl phosphate synthetase, large subunit connection domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1380","interpro_description":"Methylglyoxal synthase-like domain superfamily","interpro_id":"IPR036914","interpro_name":"MGS-like_dom_sf","locations":[{"end":1109,"start":989}],"match_end":1109,"match_start":989},{"dbname":"GENE3D","id":"G3DSA:3.30.1490.20","interpro_description":"ATP-grasp fold, subdomain 1","interpro_id":"IPR013815","interpro_name":"ATP_grasp_subdomain_1","locations":[{"end":791,"start":722}],"match_end":791,"match_start":722},{"dbname":"GENE3D","id":"G3DSA:3.30.470.20","locations":[{"end":444,"start":209},{"end":721,"start":699},{"end":971,"start":792}],"match_end":971,"match_start":209},{"dbname":"GENE3D","id":"G3DSA:1.10.1030.10","interpro_description":"Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily","interpro_id":"IPR036897","interpro_name":"CarbamoylP_synth_lsu_oligo_sf","locations":[{"end":588,"start":448}],"match_end":588,"match_start":448},{"dbname":"GENE3D","id":"G3DSA:3.40.50.20","locations":[{"end":204,"start":90},{"end":698,"start":591}],"match_end":698,"match_start":90},{"dbname":"PANTHER","id":"PTHR11405","locations":[{"end":287,"start":91}],"match_end":287,"match_start":91,"name":"CARBAMOYLTRANSFERASE FAMILY MEMBER"},{"dbname":"NCBIFAM","description":"carbamoyl-phosphate synthase large subunit","id":"NF003671","locations":[{"end":1098,"start":302}],"match_end":1098,"match_start":302,"name":"PRK05294.1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3399962,"start_pos":3396457,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":108,"start":94}},{"range":{"end":247,"start":231}},{"range":{"end":269,"start":257}},{"range":{"end":302,"start":277}},{"range":{"end":355,"start":343}},{"range":{"end":992,"start":981}}],"name":"arg4","ortholog_annotations":[{"gene_uniquename":"SJAG_00412","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2323","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00412","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC215.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00412","ortholog_taxonid":4932,"ortholog_uniquename":"YJR109C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00412","ortholog_taxonid":4932,"ortholog_uniquename":"YJR109C","reference_uniquename":"PMID:26896847"}],"product":"arginine specific carbamoyl-phosphate synthase Arg4","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0046872"],"not-binding":["GO:0004087","GO:0004088"]}},"subset_termids":["GO:0016874","GO:0005739","MONDO:0004736","GO:0006520","GO:0071941","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000050":null,"GO:0004087":null,"GO:0004088":null,"GO:0005524":null,"GO:0005739":null,"GO:0005951":null,"GO:0042450":null,"GO:0046872":null,"MONDO:0009376":null,"MONDO:0014151":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00412.1"],"transcripts_by_uniquename":{"SJAG_00412.1":null},"uniprot_identifier":"B6JVJ9","uniquename":"SJAG_00412"}


id: SJAG_00413
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":90,"start":90}},{"assigned_by":"UniProtKB","range":{"end":351,"start":351}},{"assigned_by":"UniProtKB","range":{"end":381,"start":381}}],"cv_annotations":{"biological_process":[{"annotations":[74933],"is_not":false,"summary":null,"term":"GO:0006696"},{"annotations":[108476],"is_not":false,"summary":null,"term":"GO:0010142"}],"cellular_component":[{"annotations":[108473],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[74932],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[74931],"is_not":false,"summary":null,"term":"GO:0003985"}],"mondo":[{"annotations":[88852],"is_not":false,"summary":null,"term":"MONDO:0008760"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05401","EnsemblGenomes-Gn:SJAG_00413","InterPro:IPR016039","InterPro:IPR020617","InterPro:IPR002155","InterPro:IPR020616","GOA:B6JVK0","UniProtKB/TrEMBL:B6JVK0","InterPro:IPR020610","InterPro:IPR020613"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nnf1","uniquename":"SJAG_00418"},{"uniquename":"SJAG_06595"},{"name":"vps20","uniquename":"SJAG_00416"},{"name":"mtl3","uniquename":"SJAG_00415"},{"name":"cwf10","uniquename":"SJAG_00414"},{"name":"erg10","uniquename":"SJAG_00413"},{"name":"arg4","uniquename":"SJAG_00412"},{"name":"pdp2","uniquename":"SJAG_00411"},{"uniquename":"SJAG_00410"},{"name":"gpd1","uniquename":"SJAG_00409"},{"name":"wss1","uniquename":"SJAG_00406"}],"genes_by_uniquename":{"HGNC:93":null,"SJAG_00413":null,"SPBC215.09c":null,"YPL028W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Thiolase, C-terminal domain","id":"PF02803","interpro_description":"Thiolase, C-terminal","interpro_id":"IPR020617","interpro_name":"Thiolase_C","locations":[{"end":394,"start":272}],"match_end":394,"match_start":272,"name":"Thiolase_C"},{"dbname":"PFAM","description":"Thiolase, N-terminal domain","id":"PF00108","interpro_description":"Thiolase, N-terminal","interpro_id":"IPR020616","interpro_name":"Thiolase_N","locations":[{"end":264,"start":6}],"match_end":264,"match_start":6,"name":"Thiolase_N"},{"dbname":"CDD","description":"thiolase","id":"cd00751","interpro_description":"Thiolase","interpro_id":"IPR002155","interpro_name":"Thiolase","locations":[{"end":394,"start":7}],"match_end":394,"match_start":7,"name":"thiolase"},{"dbname":"PROSITE_PATTERNS","description":"Thiolases active site.","id":"PS00099","interpro_description":"Thiolase, active site","interpro_id":"IPR020610","interpro_name":"Thiolase_AS","locations":[{"end":389,"start":376}],"match_end":389,"match_start":376,"name":"THIOLASE_3"},{"dbname":"PROSITE_PATTERNS","description":"Thiolases signature 2.","id":"PS00737","interpro_description":"Thiolase, conserved site","interpro_id":"IPR020613","interpro_name":"Thiolase_CS","locations":[{"end":357,"start":341}],"match_end":357,"match_start":341,"name":"THIOLASE_2"},{"dbname":"FUNFAM","description":"acetyl-CoA acetyltransferase, mitochondrial","id":"G3DSA:3.40.47.10:FF:000007","locations":[{"end":395,"start":1}],"match_end":395,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF53901","interpro_description":"Thiolase-like","interpro_id":"IPR016039","interpro_name":"Thiolase-like","locations":[{"end":394,"start":5}],"match_end":394,"match_start":5,"name":"Thiolase-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.47.10","interpro_description":"Thiolase-like","interpro_id":"IPR016039","interpro_name":"Thiolase-like","locations":[{"end":394,"start":2}],"match_end":394,"match_start":2},{"dbname":"PANTHER","id":"PTHR18919","locations":[{"end":395,"start":4}],"match_end":395,"match_start":4,"name":"ACETYL-COA C-ACYLTRANSFERASE"},{"dbname":"PIRSF","id":"PIRSF000429","interpro_description":"Thiolase","interpro_id":"IPR002155","interpro_name":"Thiolase","locations":[{"end":395,"start":1}],"match_end":395,"match_start":1,"name":"Ac-CoA_Ac_transf"},{"dbname":"NCBIFAM","description":"acetyl-CoA C-acyltransferase","id":"TIGR01930","interpro_description":"Thiolase","interpro_id":"IPR002155","interpro_name":"Thiolase","locations":[{"end":393,"start":8}],"match_end":393,"match_start":8,"name":"AcCoA-C-Actrans"}],"location":{"chromosome_name":"supercont5.1","end_pos":3395447,"start_pos":3393954,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":196,"start":187}},{"range":{"end":269,"start":255}}],"name":"erg10","ortholog_annotations":[{"gene_uniquename":"SJAG_00413","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:93","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00413","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC215.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00413","ortholog_taxonid":4932,"ortholog_uniquename":"YPL028W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00413","ortholog_taxonid":4932,"ortholog_uniquename":"YPL028W","reference_uniquename":"PMID:26896847"}],"product":"acetyl-CoA C-acetyltransferase Erg10","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003985"]}},"subset_termids":["GO:0016746","MONDO:0002525","GO:0006629","GO:0005739","MONDO:0004736","MONDO:0006025","GO:0005829","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003985":null,"GO:0005739":null,"GO:0005829":null,"GO:0006696":null,"GO:0010142":null,"MONDO:0008760":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00413.1"],"transcripts_by_uniquename":{"SJAG_00413.1":null},"uniprot_identifier":"B6JVK0","uniquename":"SJAG_00413"}


id: SJAG_00414
data:
  {"cv_annotations":{"biological_process":[{"annotations":[81154],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[108499],"is_not":false,"summary":null,"term":"GO:0140727"},{"annotations":[108500],"is_not":false,"summary":null,"term":"GO:0000244"}],"cellular_component":[{"annotations":[81150],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[108490],"is_not":false,"summary":null,"term":"GO:0005721"},{"annotations":[108491],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[70001],"is_not":false,"summary":null,"term":"GO:0000974"},{"annotations":[81152],"is_not":false,"summary":null,"term":"GO:0071007"},{"annotations":[81151],"is_not":false,"summary":null,"term":"GO:0046540"},{"annotations":[70002],"is_not":false,"summary":null,"term":"GO:0005682"}],"molecular_function":[{"annotations":[69999],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[81149],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[81153],"is_not":false,"summary":null,"term":"GO:0030623"}],"mondo":[{"annotations":[87809],"is_not":false,"summary":null,"term":"MONDO:0012516"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVK1","InterPro:IPR035655","InterPro:IPR035647","InterPro:IPR014721","InterPro:IPR020568","GOA:B6JVK1","InterPro:IPR027417","InterPro:IPR031950","EnsemblGenomes-Gn:SJAG_00414","InterPro:IPR009000","InterPro:IPR005517","InterPro:IPR000640","InterPro:IPR004161","EnsemblGenomes-Tr:EEB05402","InterPro:IPR005225","InterPro:IPR000795"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mxr1","uniquename":"SJAG_00419"},{"name":"nnf1","uniquename":"SJAG_00418"},{"uniquename":"SJAG_06595"},{"name":"vps20","uniquename":"SJAG_00416"},{"name":"mtl3","uniquename":"SJAG_00415"},{"name":"cwf10","uniquename":"SJAG_00414"},{"name":"erg10","uniquename":"SJAG_00413"},{"name":"arg4","uniquename":"SJAG_00412"},{"name":"pdp2","uniquename":"SJAG_00411"},{"uniquename":"SJAG_00410"},{"name":"gpd1","uniquename":"SJAG_00409"}],"genes_by_uniquename":{"HGNC:30858":null,"SJAG_00414":null,"SPBC215.12":null,"YKL173W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"116 kDa U5 small nuclear ribonucleoprotein component N-terminus","id":"PF16004","interpro_description":"116kDa U5 small nuclear ribonucleoprotein component, N-terminal","interpro_id":"IPR031950","interpro_name":"EFTUD2_N","locations":[{"end":133,"start":3}],"match_end":133,"match_start":3,"name":"EFTUD2"},{"dbname":"PFAM","description":"Elongation factor G C-terminus","id":"PF00679","interpro_description":"Elongation factor EFG, domain V-like","interpro_id":"IPR000640","interpro_name":"EFG_V-like","locations":[{"end":940,"start":852}],"match_end":940,"match_start":852,"name":"EFG_C"},{"dbname":"PFAM","description":"Elongation factor G, domain IV","id":"PF03764","interpro_description":"Translation elongation factor EFG/EF2, domain IV","interpro_id":"IPR005517","interpro_name":"Transl_elong_EFG/EF2_IV","locations":[{"end":848,"start":731}],"match_end":848,"match_start":731,"name":"EFG_IV"},{"dbname":"PFAM","description":"Elongation factor Tu domain 2","id":"PF03144","interpro_description":"Translation elongation factor EFTu-like, domain 2","interpro_id":"IPR004161","interpro_name":"EFTu-like_2","locations":[{"end":591,"start":517}],"match_end":591,"match_start":517,"name":"GTP_EFTU_D2"},{"dbname":"PFAM","description":"Elongation factor Tu GTP binding domain","id":"PF00009","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":415,"start":151}],"match_end":415,"match_start":151,"name":"GTP_EFTU"},{"dbname":"CDD","description":"EF2_II_snRNP","id":"cd04090","locations":[{"end":593,"start":500}],"match_end":593,"match_start":500,"name":"EF2_II_snRNP"},{"dbname":"CDD","description":"EF2_IV_snRNP","id":"cd01683","locations":[{"end":860,"start":683}],"match_end":860,"match_start":683,"name":"EF2_IV_snRNP"},{"dbname":"CDD","description":"Snu114p","id":"cd04167","interpro_description":"Snu114, GTP-binding domain","interpro_id":"IPR044121","interpro_name":"Snu114_GTP-bd","locations":[{"end":350,"start":153}],"match_end":350,"match_start":153,"name":"Snu114p"},{"dbname":"CDD","description":"snRNP_III","id":"cd16264","locations":[{"end":683,"start":612}],"match_end":683,"match_start":612,"name":"snRNP_III"},{"dbname":"CDD","description":"eEF2_C_snRNP","id":"cd04098","interpro_description":"116kDa U5 small nuclear ribonucleoprotein component, C-terminal","interpro_id":"IPR035655","interpro_name":"U5-116kDa_C","locations":[{"end":934,"start":855}],"match_end":934,"match_start":855,"name":"eEF2_C_snRNP"},{"dbname":"PROSITE_PROFILES","description":"Translational (tr)-type guanine nucleotide-binding (G) domain profile.","id":"PS51722","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":413,"start":150}],"match_end":413,"match_start":150,"name":"G_TR_2"},{"dbname":"SMART","id":"SM00889","interpro_description":"Translation elongation factor EFG/EF2, domain IV","interpro_id":"IPR005517","interpro_name":"Transl_elong_EFG/EF2_IV","locations":[{"end":850,"start":729}],"match_end":850,"match_start":729,"name":"EFG_IV_2"},{"dbname":"SMART","id":"SM00838","interpro_description":"Elongation factor EFG, domain V-like","interpro_id":"IPR000640","interpro_name":"EFG_V-like","locations":[{"end":941,"start":852}],"match_end":941,"match_start":852,"name":"EFG_C_a"},{"dbname":"PRINTS","description":"GTP-binding elongation factor signature","id":"PR00315","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":167,"start":154},{"end":234,"start":224},{"end":251,"start":240},{"end":285,"start":276}],"match_end":285,"match_start":154,"name":"ELONGATNFCT"},{"dbname":"FUNFAM","description":"U5 small nuclear ribonucleoprotein component","id":"G3DSA:3.40.50.300:FF:000646","locations":[{"end":342,"start":145}],"match_end":342,"match_start":145},{"dbname":"FUNFAM","description":"Translation elongation factor 2","id":"G3DSA:3.30.70.870:FF:000002","locations":[{"end":687,"start":611}],"match_end":687,"match_start":611},{"dbname":"FUNFAM","description":"116 kDa U5 small nuclear ribonucleoprotein component","id":"G3DSA:3.30.230.10:FF:000009","locations":[{"end":847,"start":693}],"match_end":847,"match_start":693},{"dbname":"FUNFAM","description":"116 kDa U5 small nuclear ribonucleoprotein component","id":"G3DSA:2.40.30.10:FF:000029","locations":[{"end":608,"start":464}],"match_end":608,"match_start":464},{"dbname":"FUNFAM","description":"116 kDa U5 small nuclear ribonucleoprotein component","id":"G3DSA:3.90.1430.10:FF:000001","locations":[{"end":447,"start":343}],"match_end":447,"match_start":343},{"dbname":"FUNFAM","description":"116 kDa U5 small nuclear ribonucleoprotein","id":"G3DSA:3.30.70.240:FF:000004","locations":[{"end":969,"start":848}],"match_end":969,"match_start":848},{"dbname":"SUPERFAMILY","id":"SSF50447","interpro_description":"Translation protein, beta-barrel domain superfamily","interpro_id":"IPR009000","interpro_name":"Transl_B-barrel_sf","locations":[{"end":598,"start":465}],"match_end":598,"match_start":465,"name":"Translation proteins"},{"dbname":"SUPERFAMILY","id":"SSF54211","interpro_description":"Ribosomal protein uS5 domain 2-type superfamily","interpro_id":"IPR020568","interpro_name":"Ribosomal_Su5_D2-typ_SF","locations":[{"end":854,"start":687}],"match_end":854,"match_start":687,"name":"Ribosomal protein S5 domain 2-like"},{"dbname":"SUPERFAMILY","id":"SSF54980","interpro_description":"EF-G domain III/V-like","interpro_id":"IPR035647","interpro_name":"EFG_III/V","locations":[{"end":684,"start":608},{"end":943,"start":855}],"match_end":943,"match_start":608,"name":"EF-G C-terminal domain-like"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":462,"start":137}],"match_end":462,"match_start":137,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.30.230.10","interpro_description":"Small ribosomal subunit protein uS5 domain 2-type fold, subgroup","interpro_id":"IPR014721","interpro_name":"Ribsml_uS5_D2-typ_fold_subgr","locations":[{"end":847,"start":693}],"match_end":847,"match_start":693},{"dbname":"GENE3D","id":"G3DSA:3.30.70.240","locations":[{"end":969,"start":848}],"match_end":969,"match_start":848},{"dbname":"GENE3D","id":"G3DSA:3.30.70.870","locations":[{"end":686,"start":611}],"match_end":686,"match_start":611,"name":"Elongation Factor G (Translational Gtpase), domain 3"},{"dbname":"GENE3D","id":"G3DSA:3.90.1430.10","locations":[{"end":447,"start":344}],"match_end":447,"match_start":344,"name":"Yeast translation eEF2 (G' domain)"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":325,"start":146}],"match_end":325,"match_start":146},{"dbname":"GENE3D","id":"G3DSA:2.40.30.10","locations":[{"end":599,"start":464}],"match_end":599,"match_start":464,"name":"Translation factors"},{"dbname":"PANTHER","id":"PTHR42908","locations":[{"end":986,"start":147}],"match_end":986,"match_start":147,"name":"TRANSLATION ELONGATION FACTOR-RELATED"},{"dbname":"NCBIFAM","description":"small GTP-binding protein domain","id":"TIGR00231","interpro_description":"Small GTP-binding domain","interpro_id":"IPR005225","interpro_name":"Small_GTP-bd","locations":[{"end":285,"start":156}],"match_end":285,"match_start":156,"name":"small_GTP"}],"location":{"chromosome_name":"supercont5.1","end_pos":3393675,"start_pos":3390428,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":34,"start":25}},{"range":{"end":57,"start":37}},{"range":{"end":80,"start":69}},{"range":{"end":257,"start":243}}],"name":"cwf10","ortholog_annotations":[{"gene_uniquename":"SJAG_00414","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30858","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00414","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC215.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00414","ortholog_taxonid":4932,"ortholog_uniquename":"YKL173W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00414","ortholog_taxonid":4932,"ortholog_uniquename":"YKL173W","reference_uniquename":"PMID:26896847"}],"product":"U5 snRNP GTPase subunit Cwf10","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030623","GO:0005525"],"not-binding":["GO:0003924"]}},"subset_termids":["MONDO:0005497","GO:0005694","MONDO:0000426","GO:0003924","GO:0016071","GO:0005829","GO:0005634","GO:0065003","GO:0006325"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000244":null,"GO:0000974":null,"GO:0003924":null,"GO:0005525":null,"GO:0005682":null,"GO:0005721":null,"GO:0005829":null,"GO:0030623":null,"GO:0045292":null,"GO:0046540":null,"GO:0071007":null,"GO:0071014":null,"GO:0140727":null,"MONDO:0012516":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00414.1"],"transcripts_by_uniquename":{"SJAG_00414.1":null},"uniprot_identifier":"B6JVK1","uniquename":"SJAG_00414"}


id: SJAG_00415
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":566,"start":18}}],"cv_annotations":{"cellular_component":[{"annotations":[108504],"is_not":false,"summary":null,"term":"GO:0009897"}],"sequence":[{"annotations":[82345],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05403","UniProtKB/TrEMBL:B6JVK2","EnsemblGenomes-Gn:SJAG_00415"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":238,"start":191}},{"range":{"end":412,"start":378}},{"range":{"end":472,"start":428}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00420"},{"name":"mxr1","uniquename":"SJAG_00419"},{"name":"nnf1","uniquename":"SJAG_00418"},{"uniquename":"SJAG_06595"},{"name":"vps20","uniquename":"SJAG_00416"},{"name":"mtl3","uniquename":"SJAG_00415"},{"name":"cwf10","uniquename":"SJAG_00414"},{"name":"erg10","uniquename":"SJAG_00413"},{"name":"arg4","uniquename":"SJAG_00412"},{"name":"pdp2","uniquename":"SJAG_00411"},{"uniquename":"SJAG_00410"}],"genes_by_uniquename":{"SJAG_00415":null,"SPBC215.13":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":238,"start":191},{"end":412,"start":378},{"end":472,"start":428}],"match_end":472,"match_start":191,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":412,"start":395}],"match_end":412,"match_start":395,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3389332,"start_pos":3387579,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":155,"start":72}},{"range":{"end":368,"start":166}},{"range":{"end":479,"start":394}},{"range":{"end":508,"start":491}}],"name":"mtl3","ortholog_annotations":[{"gene_uniquename":"SJAG_00415","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC215.13","reference_uniquename":"PMID:21511999"}],"product":"plasma membrane-associated serine-rich cell wall sensor Mtl1/Mtl3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":17,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"subset_termids":["GO:0009986","GO:0005886"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0009897":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00415.1"],"transcripts_by_uniquename":{"SJAG_00415.1":null},"uniprot_identifier":"B6JVK2","uniquename":"SJAG_00415"}


id: SJAG_00416
data:
  {"coiled_coil_coords":[{"range":{"end":38,"start":18}}],"cv_annotations":{"biological_process":[{"annotations":[108510],"is_not":false,"summary":null,"term":"GO:0007084"},{"annotations":[108511],"is_not":false,"summary":null,"term":"GO:0043328"},{"annotations":[71894],"is_not":false,"summary":null,"term":"GO:0006900"}],"cellular_component":[{"annotations":[108505],"is_not":false,"summary":null,"term":"GO:0005938"},{"annotations":[71892],"is_not":false,"summary":null,"term":"GO:0000815"},{"annotations":[71891],"is_not":false,"summary":null,"term":"GO:0005771"},{"annotations":[108508],"is_not":false,"summary":null,"term":"GO:0005635"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05404","EnsemblGenomes-Gn:SJAG_00416","InterPro:IPR005024","UniProtKB/TrEMBL:B6JVK3","GOA:B6JVK3"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":226,"start":165}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tbp1","uniquename":"SJAG_00421"},{"uniquename":"SJAG_00420"},{"name":"mxr1","uniquename":"SJAG_00419"},{"name":"nnf1","uniquename":"SJAG_00418"},{"uniquename":"SJAG_06595"},{"name":"vps20","uniquename":"SJAG_00416"},{"name":"mtl3","uniquename":"SJAG_00415"},{"name":"cwf10","uniquename":"SJAG_00414"},{"name":"erg10","uniquename":"SJAG_00413"},{"name":"arg4","uniquename":"SJAG_00412"},{"name":"pdp2","uniquename":"SJAG_00411"}],"genes_by_uniquename":{"HGNC:25675":null,"SJAG_00416":null,"SPBC215.14c":null,"YMR077C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Snf7","id":"PF03357","interpro_description":"Snf7 family","interpro_id":"IPR005024","interpro_name":"Snf7_fam","locations":[{"end":186,"start":14}],"match_end":186,"match_start":14,"name":"Snf7"},{"dbname":"GENE3D","id":"G3DSA:6.10.140.1230","locations":[{"end":169,"start":7}],"match_end":169,"match_start":7},{"dbname":"PANTHER","id":"PTHR22761","interpro_description":"Snf7 family","interpro_id":"IPR005024","interpro_name":"Snf7_fam","locations":[{"end":192,"start":13}],"match_end":192,"match_start":13,"name":"CHARGED MULTIVESICULAR BODY PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":38,"start":18}],"match_end":38,"match_start":18,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":226,"start":165}],"match_end":226,"match_start":165,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3387027,"start_pos":3386347,"strand":"forward"},"name":"vps20","ortholog_annotations":[{"gene_uniquename":"SJAG_00416","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25675","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00416","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC215.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00416","ortholog_taxonid":4932,"ortholog_uniquename":"YMR077C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00416","ortholog_taxonid":4932,"ortholog_uniquename":"YMR077C","reference_uniquename":"PMID:26896847"}],"product":"ESCRT III complex subunit Vps20","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005768","GO:0005938","GO:0031410","GO:0016192","GO:0061024","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000815":null,"GO:0005635":null,"GO:0005771":null,"GO:0005938":null,"GO:0006900":null,"GO:0007084":null,"GO:0043328":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00416.1"],"transcripts_by_uniquename":{"SJAG_00416.1":null},"uniprot_identifier":"B6JVK3","uniquename":"SJAG_00416"}


id: SJAG_00418
data:
  {"coiled_coil_coords":[{"range":{"end":169,"start":117}}],"cv_annotations":{"biological_process":[{"annotations":[97441],"is_not":false,"summary":null,"term":"GO:0051315"},{"annotations":[97442],"is_not":false,"summary":null,"term":"GO:0051455"}],"cellular_component":[{"annotations":[60716],"is_not":false,"summary":null,"term":"GO:0000444"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05405","InterPro:IPR007128","GOA:B6JVK4","InterPro:IPR016851","EnsemblGenomes-Gn:SJAG_00418","UniProtKB/TrEMBL:B6JVK4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nst1","uniquename":"SJAG_00423"},{"uniquename":"SJAG_00422"},{"name":"tbp1","uniquename":"SJAG_00421"},{"uniquename":"SJAG_00420"},{"name":"mxr1","uniquename":"SJAG_00419"},{"name":"nnf1","uniquename":"SJAG_00418"},{"uniquename":"SJAG_06595"},{"name":"vps20","uniquename":"SJAG_00416"},{"name":"mtl3","uniquename":"SJAG_00415"},{"name":"cwf10","uniquename":"SJAG_00414"},{"name":"erg10","uniquename":"SJAG_00413"}],"genes_by_uniquename":{"HGNC:9112":null,"SJAG_00418":null,"SPAC29E6.04":null,"YJR112W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nnf1","id":"PF03980","interpro_description":"Nuclear MIS12/MIND complex subunit PMF1/Nnf1","interpro_id":"IPR007128","interpro_name":"PMF1/Nnf1","locations":[{"end":142,"start":41}],"match_end":142,"match_start":41,"name":"Nnf1"},{"dbname":"PANTHER","id":"PTHR15459","interpro_description":"Nuclear MIS12/MIND complex subunit PMF1/Nnf1","interpro_id":"IPR007128","interpro_name":"PMF1/Nnf1","locations":[{"end":163,"start":3}],"match_end":163,"match_start":3,"name":"POLYAMINE-MODULATED FACTOR 1"},{"dbname":"PIRSF","id":"PIRSF027153","interpro_description":"Kinetochore-associated protein Nnf1","interpro_id":"IPR016851","interpro_name":"Nnf1","locations":[{"end":184,"start":1}],"match_end":184,"match_start":1,"name":"NNF1"},{"dbname":"COILS","id":"Coil","locations":[{"end":169,"start":117}],"match_end":169,"match_start":117,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3383232,"start_pos":3382654,"strand":"reverse"},"name":"nnf1","ortholog_annotations":[{"gene_uniquename":"SJAG_00418","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9112","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00418","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29E6.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00418","ortholog_taxonid":4932,"ortholog_uniquename":"YJR112W","reference_uniquename":"PMID:29761456"}],"product":"MIS12/MIND complex subunit Nnf1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0000776","GO:0005694","GO:0000070","GO:0140013"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000444":null,"GO:0051315":null,"GO:0051455":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00418.1"],"transcripts_by_uniquename":{"SJAG_00418.1":null},"uniprot_identifier":"B6JVK4","uniquename":"SJAG_00418"}


id: SJAG_00419
data:
  {"cv_annotations":{"biological_process":[{"annotations":[61053],"is_not":false,"summary":null,"term":"GO:0034599"},{"annotations":[97446],"is_not":false,"summary":null,"term":"GO:0030091"},{"annotations":[97447],"is_not":false,"summary":null,"term":"GO:0110052"}],"cellular_component":[{"annotations":[97443],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[97444],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[97448],"is_not":false,"summary":null,"term":"GO:0036456"},{"annotations":[61051],"is_not":false,"summary":null,"term":"GO:0008113"}]},"dbxrefs":["InterPro:IPR002569","EnsemblGenomes-Gn:SJAG_00419","InterPro:IPR036509","UniProtKB/TrEMBL:B6JVK5","EnsemblGenomes-Tr:EEB05406","GOA:B6JVK5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rho2","uniquename":"SJAG_00424"},{"name":"nst1","uniquename":"SJAG_00423"},{"uniquename":"SJAG_00422"},{"name":"tbp1","uniquename":"SJAG_00421"},{"uniquename":"SJAG_00420"},{"name":"mxr1","uniquename":"SJAG_00419"},{"name":"nnf1","uniquename":"SJAG_00418"},{"uniquename":"SJAG_06595"},{"name":"vps20","uniquename":"SJAG_00416"},{"name":"mtl3","uniquename":"SJAG_00415"},{"name":"cwf10","uniquename":"SJAG_00414"}],"genes_by_uniquename":{"HGNC:7377":null,"SJAG_00419":null,"SPAC29E6.05c":null,"YER042W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Peptide methionine sulfoxide reductase","id":"PF01625","interpro_description":"Peptide methionine sulphoxide reductase MsrA domain","interpro_id":"IPR002569","interpro_name":"Met_Sox_Rdtase_MsrA_dom","locations":[{"end":158,"start":3}],"match_end":158,"match_start":3,"name":"PMSR"},{"dbname":"FUNFAM","description":"Peptide methionine sulfoxide reductase","id":"G3DSA:3.30.1060.10:FF:000006","locations":[{"end":167,"start":1}],"match_end":167,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF55068","interpro_description":"Peptide methionine sulphoxide reductase MsrA superfamily","interpro_id":"IPR036509","interpro_name":"Met_Sox_Rdtase_MsrA_sf","locations":[{"end":160,"start":1}],"match_end":160,"match_start":1,"name":"Peptide methionine sulfoxide reductase"},{"dbname":"GENE3D","id":"G3DSA:3.30.1060.10","interpro_description":"Peptide methionine sulphoxide reductase MsrA superfamily","interpro_id":"IPR036509","interpro_name":"Met_Sox_Rdtase_MsrA_sf","locations":[{"end":167,"start":1}],"match_end":167,"match_start":1,"name":"Peptide methionine sulphoxide reductase MsrA"},{"dbname":"PANTHER","id":"PTHR43774","locations":[{"end":163,"start":1}],"match_end":163,"match_start":1,"name":"PEPTIDE METHIONINE SULFOXIDE REDUCTASE"},{"dbname":"HAMAP","description":"Peptide methionine sulfoxide reductase MsrA [msrA].","id":"MF_01401","interpro_description":"Peptide methionine sulphoxide reductase MsrA domain","interpro_id":"IPR002569","interpro_name":"Met_Sox_Rdtase_MsrA_dom","locations":[{"end":164,"start":1}],"match_end":164,"match_start":1,"name":"MsrA"},{"dbname":"NCBIFAM","description":"peptide-methionine (S)-S-oxide reductase MsrA","id":"TIGR00401","interpro_description":"Peptide methionine sulphoxide reductase MsrA domain","interpro_id":"IPR002569","interpro_name":"Met_Sox_Rdtase_MsrA_dom","locations":[{"end":159,"start":2}],"match_end":159,"match_start":2,"name":"msrA"}],"location":{"chromosome_name":"supercont5.1","end_pos":3382568,"start_pos":3382008,"strand":"forward"},"name":"mxr1","ortholog_annotations":[{"gene_uniquename":"SJAG_00419","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7377","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00419","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29E6.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00419","ortholog_taxonid":4932,"ortholog_uniquename":"YER042W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00419","ortholog_taxonid":4932,"ortholog_uniquename":"YER042W","reference_uniquename":"PMID:26896847"}],"product":"peptide-methionine (S)-S-oxide reductase MsrA","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008113","GO:0036456"]}},"subset_termids":["GO:0005829","GO:0005634","GO:0098754","GO:0016491"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008113":null,"GO:0030091":null,"GO:0034599":null,"GO:0036456":null,"GO:0110052":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00419.1"],"transcripts_by_uniquename":{"SJAG_00419.1":null},"uniprot_identifier":"B6JVK5","uniquename":"SJAG_00419"}


id: SJAG_00420
data:
  {"coiled_coil_coords":[{"range":{"end":687,"start":653}}],"cv_annotations":{"biological_process":[{"annotations":[97452],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[97450],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[97451],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[74225],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[74227],"is_not":false,"summary":null,"term":"GO:0004817"}],"mondo":[{"annotations":[87250],"is_not":false,"summary":null,"term":"MONDO:0030047"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00420","UniProtKB/TrEMBL:B6JVK6","InterPro:IPR015803","InterPro:IPR024909","EnsemblGenomes-Tr:EEB05407","InterPro:IPR032678","InterPro:IPR009080","GOA:B6JVK6","InterPro:IPR014729"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"srp2","uniquename":"SJAG_00425"},{"name":"rho2","uniquename":"SJAG_00424"},{"name":"nst1","uniquename":"SJAG_00423"},{"uniquename":"SJAG_00422"},{"name":"tbp1","uniquename":"SJAG_00421"},{"uniquename":"SJAG_00420"},{"name":"mxr1","uniquename":"SJAG_00419"},{"name":"nnf1","uniquename":"SJAG_00418"},{"uniquename":"SJAG_06595"},{"name":"vps20","uniquename":"SJAG_00416"},{"name":"mtl3","uniquename":"SJAG_00415"}],"genes_by_uniquename":{"HGNC:1493":null,"SJAG_00420":null,"SPAC29E6.06c":null,"YNL247W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"tRNA synthetases class I (C) catalytic domain","id":"PF01406","interpro_description":"tRNA synthetases class I, catalytic domain","interpro_id":"IPR032678","interpro_name":"tRNA-synt_1_cat_dom","locations":[{"end":457,"start":40}],"match_end":457,"match_start":40,"name":"tRNA-synt_1e"},{"dbname":"CDD","description":"CysRS_core","id":"cd00672","interpro_description":"tRNA synthetases class I, catalytic domain","interpro_id":"IPR032678","interpro_name":"tRNA-synt_1_cat_dom","locations":[{"end":449,"start":24}],"match_end":449,"match_start":24,"name":"CysRS_core"},{"dbname":"PRINTS","description":"Cysteinyl-tRNA synthetase signature","id":"PR00983","interpro_description":"Cysteinyl-tRNA synthetase/mycothiol ligase","interpro_id":"IPR024909","interpro_name":"Cys-tRNA/MSH_ligase","locations":[{"end":55,"start":44},{"end":90,"start":81},{"end":353,"start":335},{"end":387,"start":366}],"match_end":387,"match_start":44,"name":"TRNASYNTHCYS"},{"dbname":"SUPERFAMILY","id":"SSF52374","locations":[{"end":98,"start":24},{"end":455,"start":215}],"match_end":455,"match_start":24,"name":"Nucleotidylyl transferase"},{"dbname":"SUPERFAMILY","id":"SSF47323","interpro_description":"Aminoacyl-tRNA synthetase, class Ia, anticodon-binding","interpro_id":"IPR009080","interpro_name":"tRNAsynth_Ia_anticodon-bd","locations":[{"end":645,"start":496}],"match_end":645,"match_start":496,"name":"Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases"},{"dbname":"GENE3D","id":"G3DSA:1.20.120.1910","locations":[{"end":649,"start":457}],"match_end":649,"match_start":457},{"dbname":"GENE3D","id":"G3DSA:3.40.50.620","interpro_description":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_id":"IPR014729","interpro_name":"Rossmann-like_a/b/a_fold","locations":[{"end":156,"start":3},{"end":450,"start":179}],"match_end":450,"match_start":3,"name":"HUPs"},{"dbname":"PANTHER","id":"PTHR10890","interpro_description":"Cysteinyl-tRNA synthetase/mycothiol ligase","interpro_id":"IPR024909","interpro_name":"Cys-tRNA/MSH_ligase","locations":[{"end":656,"start":8}],"match_end":656,"match_start":8,"name":"CYSTEINYL-TRNA SYNTHETASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":687,"start":653}],"match_end":687,"match_start":653,"name":"Coil"},{"dbname":"HAMAP","description":"Cysteine--tRNA ligase [cysS].","id":"MF_00041","interpro_description":"Cysteine-tRNA ligase","interpro_id":"IPR015803","interpro_name":"Cys-tRNA-ligase","locations":[{"end":707,"start":21}],"match_end":707,"match_start":21,"name":"Cys_tRNA_synth"},{"dbname":"NCBIFAM","description":"cysteine--tRNA ligase","id":"TIGR00435","interpro_description":"Cysteine-tRNA ligase","interpro_id":"IPR015803","interpro_name":"Cys-tRNA-ligase","locations":[{"end":649,"start":23}],"match_end":649,"match_start":23,"name":"cysS"}],"location":{"chromosome_name":"supercont5.1","end_pos":3381436,"start_pos":3378946,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":181,"start":167}},{"range":{"end":441,"start":430}},{"range":{"end":684,"start":666}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00420","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1493","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00420","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29E6.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00420","ortholog_taxonid":4932,"ortholog_uniquename":"YNL247W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00420","ortholog_taxonid":4932,"ortholog_uniquename":"YNL247W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial and cytoplasmic cysteine-tRNA ligase Crs1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004817"]}},"subset_termids":["GO:0140098","GO:0002181","GO:0016874","GO:0140101","GO:0005829","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0004817":null,"GO:0005524":null,"GO:0005759":null,"GO:0005829":null,"MONDO:0030047":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00420.1"],"transcripts_by_uniquename":{"SJAG_00420.1":null},"uniprot_identifier":"B6JVK6","uniquename":"SJAG_00420"}


id: SJAG_00421
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97459],"is_not":false,"summary":null,"term":"GO:0006361"},{"annotations":[71458],"is_not":false,"summary":null,"term":"GO:0006367"},{"annotations":[97461],"is_not":false,"summary":null,"term":"GO:0006384"}],"cellular_component":[{"annotations":[97456],"is_not":false,"summary":null,"term":"GO:0000120"},{"annotations":[97457],"is_not":false,"summary":null,"term":"GO:0005669"},{"annotations":[97458],"is_not":false,"summary":null,"term":"GO:0000126"}],"molecular_function":[{"annotations":[97462],"is_not":false,"summary":null,"term":"GO:0001181"},{"annotations":[97463],"is_not":false,"summary":null,"term":"GO:0000979"},{"annotations":[82207],"is_not":false,"summary":null,"term":"GO:0016251"},{"annotations":[97465],"is_not":false,"summary":null,"term":"GO:0000995"},{"annotations":[97466],"is_not":false,"summary":null,"term":"GO:0001006"}],"mondo":[{"annotations":[89167],"is_not":false,"summary":null,"term":"MONDO:0008199"},{"annotations":[87596],"is_not":false,"summary":null,"term":"MONDO:0011781"}]},"dbxrefs":["InterPro:IPR012295","UniProtKB/TrEMBL:B6JVK7","InterPro:IPR030491","InterPro:IPR000814","EnsemblGenomes-Gn:SJAG_00421","GOA:B6JVK7","EnsemblGenomes-Tr:EEB05408","InterPro:IPR033710"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bbl1","uniquename":"SJAG_00426"},{"name":"srp2","uniquename":"SJAG_00425"},{"name":"rho2","uniquename":"SJAG_00424"},{"name":"nst1","uniquename":"SJAG_00423"},{"uniquename":"SJAG_00422"},{"name":"tbp1","uniquename":"SJAG_00421"},{"uniquename":"SJAG_00420"},{"name":"mxr1","uniquename":"SJAG_00419"},{"name":"nnf1","uniquename":"SJAG_00418"},{"uniquename":"SJAG_06595"},{"name":"vps20","uniquename":"SJAG_00416"}],"genes_by_uniquename":{"HGNC:11588":null,"HGNC:19841":null,"SJAG_00421":null,"SPAC29E6.08":null,"YER148W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Transcription factor TFIID (or TATA-binding protein, TBP)","id":"PF00352","interpro_description":"TATA-box binding protein","interpro_id":"IPR000814","interpro_name":"TBP","locations":[{"end":137,"start":56},{"end":228,"start":145}],"match_end":228,"match_start":56,"name":"TBP"},{"dbname":"CDD","description":"TBP_eukaryotes","id":"cd04516","interpro_description":"TATA-box binding protein, eukaryotic","interpro_id":"IPR033710","interpro_name":"TBP_eukaryotic","locations":[{"end":228,"start":55}],"match_end":228,"match_start":55,"name":"TBP_eukaryotes"},{"dbname":"PROSITE_PATTERNS","description":"Transcription factor TFIID repeat signature.","id":"PS00351","interpro_description":"TATA-box binding protein, conserved site","interpro_id":"IPR030491","interpro_name":"TBP_CS","locations":[{"end":225,"start":176}],"match_end":225,"match_start":176,"name":"TFIID"},{"dbname":"PRINTS","description":"Transcription initiation factor TFIID signature","id":"PR00686","interpro_description":"TATA-box binding protein","interpro_id":"IPR000814","interpro_name":"TBP","locations":[{"end":73,"start":58},{"end":119,"start":82},{"end":164,"start":148},{"end":187,"start":172},{"end":207,"start":191}],"match_end":207,"match_start":58,"name":"TIFACTORIID"},{"dbname":"FUNFAM","description":"TATA-box-binding protein 2","id":"G3DSA:3.30.310.10:FF:000002","locations":[{"end":228,"start":147}],"match_end":228,"match_start":147},{"dbname":"FUNFAM","description":"TATA-box-binding protein 2","id":"G3DSA:3.30.310.10:FF:000001","locations":[{"end":146,"start":63}],"match_end":146,"match_start":63},{"dbname":"SUPERFAMILY","id":"SSF55945","locations":[{"end":229,"start":53}],"match_end":229,"match_start":53,"name":"TATA-box binding protein-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.310.10","interpro_description":"TBP domain superfamily","interpro_id":"IPR012295","interpro_name":"TBP_dom_sf","locations":[{"end":228,"start":59}],"match_end":228,"match_start":59},{"dbname":"PANTHER","id":"PTHR10126","interpro_description":"TATA-box binding protein","interpro_id":"IPR000814","interpro_name":"TBP","locations":[{"end":230,"start":39}],"match_end":230,"match_start":39,"name":"TATA-BOX BINDING PROTEIN"},{"dbname":"HAMAP","description":"TATA-box-binding protein [tbp].","id":"MF_00408","interpro_description":"TATA-box binding protein","interpro_id":"IPR000814","interpro_name":"TBP","locations":[{"end":231,"start":52}],"match_end":231,"match_start":52,"name":"TATA_bind_prot_arch"}],"location":{"chromosome_name":"supercont5.1","end_pos":3377826,"start_pos":3376888,"strand":"reverse"},"name":"tbp1","ortholog_annotations":[{"gene_uniquename":"SJAG_00421","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11588","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00421","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19841","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00421","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29E6.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00421","ortholog_taxonid":4932,"ortholog_uniquename":"YER148W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00421","ortholog_taxonid":4932,"ortholog_uniquename":"YER148W","reference_uniquename":"PMID:26896847"}],"product":"TATA-binding protein (TBP)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0001006","GO:0000979"],"not-binding":["GO:0000995","GO:0001181","GO:0016251"]}},"subset_termids":["GO:0006351","GO:0005730","MONDO:0000426","MONDO:0002039","GO:0005634","GO:0140223","GO:0005654","MONDO:0005559"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000120":null,"GO:0000126":null,"GO:0000979":null,"GO:0000995":null,"GO:0001006":null,"GO:0001181":null,"GO:0005669":null,"GO:0006361":null,"GO:0006367":null,"GO:0006384":null,"GO:0016251":null,"MONDO:0008199":null,"MONDO:0011781":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00421.1"],"transcripts_by_uniquename":{"SJAG_00421.1":null},"uniprot_identifier":"B6JVK7","uniquename":"SJAG_00421"}


id: SJAG_00422
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[97467],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[97468],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVK8","EnsemblGenomes-Gn:SJAG_00422","EnsemblGenomes-Tr:EEB05409"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":87,"start":1}},{"range":{"end":292,"start":231}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ptk1","uniquename":"SJAG_00427"},{"name":"bbl1","uniquename":"SJAG_00426"},{"name":"srp2","uniquename":"SJAG_00425"},{"name":"rho2","uniquename":"SJAG_00424"},{"name":"nst1","uniquename":"SJAG_00423"},{"uniquename":"SJAG_00422"},{"name":"tbp1","uniquename":"SJAG_00421"},{"uniquename":"SJAG_00420"},{"name":"mxr1","uniquename":"SJAG_00419"},{"name":"nnf1","uniquename":"SJAG_00418"},{"uniquename":"SJAG_06595"}],"genes_by_uniquename":{"SJAG_00422":null,"SPAC29E6.09":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":87,"start":1},{"end":292,"start":231}],"match_end":292,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":65,"start":52},{"end":253,"start":234}],"match_end":253,"match_start":52,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":10,"start":1},{"end":81,"start":67},{"end":269,"start":255}],"match_end":269,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3375119,"start_pos":3374088,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00422","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29E6.09"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00422.1"],"transcripts_by_uniquename":{"SJAG_00422.1":null},"uniprot_identifier":"B6JVK8","uniquename":"SJAG_00422"}


id: SJAG_00423
data:
  {"coiled_coil_coords":[{"range":{"end":386,"start":366}},{"range":{"end":545,"start":511}},{"range":{"end":749,"start":573}}],"cv_annotations":{"biological_process":[{"annotations":[97472],"is_not":false,"summary":null,"term":"GO:2000766"}],"cellular_component":[{"annotations":[97470],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[97471],"is_not":false,"summary":null,"term":"GO:0000932"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVK9","InterPro:IPR025279","EnsemblGenomes-Tr:EEB05410","GOA:B6JVK9","EnsemblGenomes-Gn:SJAG_00423"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":45,"start":26}},{"range":{"end":188,"start":143}},{"range":{"end":427,"start":372}},{"range":{"end":533,"start":501}},{"range":{"end":801,"start":584}},{"range":{"end":930,"start":904}},{"range":{"end":1008,"start":944}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"},{"name":"bbl1","uniquename":"SJAG_00426"},{"name":"srp2","uniquename":"SJAG_00425"},{"name":"rho2","uniquename":"SJAG_00424"},{"name":"nst1","uniquename":"SJAG_00423"},{"uniquename":"SJAG_00422"},{"name":"tbp1","uniquename":"SJAG_00421"},{"uniquename":"SJAG_00420"},{"name":"mxr1","uniquename":"SJAG_00419"},{"name":"nnf1","uniquename":"SJAG_00418"}],"genes_by_uniquename":{"SJAG_00423":null,"SPAC29E6.10c":null,"YNL091W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Salt tolerance down-regulator","id":"PF13945","interpro_description":"Stress response protein NST1","interpro_id":"IPR025279","interpro_name":"NST1","locations":[{"end":303,"start":155}],"match_end":303,"match_start":155,"name":"NST1"},{"dbname":"PANTHER","id":"PTHR31780","interpro_description":"Fungal stress response NST1","interpro_id":"IPR051195","interpro_name":"Fungal_stress_NST1","locations":[{"end":304,"start":29}],"match_end":304,"match_start":29,"name":"STRESS RESPONSE PROTEIN NST1-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":386,"start":366},{"end":545,"start":511},{"end":749,"start":573}],"match_end":749,"match_start":366,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":45,"start":26},{"end":188,"start":143},{"end":427,"start":372},{"end":533,"start":501},{"end":801,"start":584},{"end":930,"start":904},{"end":1008,"start":944}],"match_end":1008,"match_start":26,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":416,"start":372},{"end":801,"start":776}],"match_end":801,"match_start":372,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":533,"start":512}],"match_end":533,"match_start":512,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":511,"start":501},{"end":607,"start":584},{"end":761,"start":617}],"match_end":761,"match_start":501,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":45,"start":32},{"end":173,"start":161}],"match_end":173,"match_start":32,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3373662,"start_pos":3370351,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":56,"start":28}},{"range":{"end":171,"start":156}},{"range":{"end":231,"start":219}},{"range":{"end":321,"start":302}},{"range":{"end":415,"start":366}},{"range":{"end":544,"start":511}},{"range":{"end":740,"start":591}},{"range":{"end":806,"start":775}},{"range":{"end":934,"start":920}}],"name":"nst1","ortholog_annotations":[{"gene_uniquename":"SJAG_00423","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29E6.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00423","ortholog_taxonid":4932,"ortholog_uniquename":"YNL091W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00423","ortholog_taxonid":4932,"ortholog_uniquename":"YNL091W","reference_uniquename":"PMID:26896847"}],"product":"P-body component, Nst1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0000932","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000932":null,"GO:0005829":null,"GO:2000766":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00423.1"],"transcripts_by_uniquename":{"SJAG_00423.1":null},"uniprot_identifier":"B6JVK9","uniquename":"SJAG_00423"}


id: SJAG_00424
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91278],"is_not":false,"summary":null,"term":"GO:0030950"},{"annotations":[91279],"is_not":false,"summary":null,"term":"GO:1902660"},{"annotations":[91280],"is_not":false,"summary":null,"term":"GO:1903139"},{"annotations":[75817],"is_not":false,"summary":null,"term":"GO:0032956"},{"annotations":[91282],"is_not":false,"summary":null,"term":"GO:0070610"}],"cellular_component":[{"annotations":[91272],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[75819],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[91274],"is_not":false,"summary":null,"term":"GO:0035841"},{"annotations":[91275],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[91276],"is_not":false,"summary":null,"term":"GO:0035840"},{"annotations":[75820],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[75816],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[75818],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[91285],"is_not":false,"summary":null,"term":"GO:0043539"}],"mondo":[{"annotations":[88634],"is_not":false,"summary":null,"term":"MONDO:0032884"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00424","EnsemblGenomes-Tr:EEB05411","InterPro:IPR027417","InterPro:IPR001806","InterPro:IPR003578","UniProtKB/TrEMBL:B6JVL0","GOA:B6JVL0","InterPro:IPR005225","InterPro:IPR017231"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"},{"name":"bbl1","uniquename":"SJAG_00426"},{"name":"srp2","uniquename":"SJAG_00425"},{"name":"rho2","uniquename":"SJAG_00424"},{"name":"nst1","uniquename":"SJAG_00423"},{"uniquename":"SJAG_00422"},{"name":"tbp1","uniquename":"SJAG_00421"},{"uniquename":"SJAG_00420"},{"name":"mxr1","uniquename":"SJAG_00419"}],"genes_by_uniquename":{"HGNC:667":null,"HGNC:668":null,"HGNC:669":null,"SJAG_00424":null,"SPAC16.01":null,"YNL090W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ras family","id":"PF00071","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":181,"start":10}],"match_end":181,"match_start":10,"name":"Ras"},{"dbname":"CDD","description":"Rho2","id":"cd04129","locations":[{"end":199,"start":8}],"match_end":199,"match_start":8,"name":"Rho2"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Rho family profile.","id":"PS51420","locations":[{"end":181,"start":2}],"match_end":181,"match_start":2,"name":"RHO"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Rab1 family profile.","id":"PS51419","locations":[{"end":200,"start":2}],"match_end":200,"match_start":2,"name":"RAB"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Ras family profile.","id":"PS51421","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":200,"start":3}],"match_end":200,"match_start":3,"name":"RAS"},{"dbname":"SMART","id":"SM00174","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":184,"start":11}],"match_end":184,"match_start":11,"name":"rho_sub_3"},{"dbname":"SMART","id":"SM00176","locations":[{"end":189,"start":14}],"match_end":189,"match_start":14,"name":"ran_sub_2"},{"dbname":"SMART","id":"SM00173","locations":[{"end":184,"start":8}],"match_end":184,"match_start":8,"name":"ras_sub_4"},{"dbname":"SMART","id":"SM00175","locations":[{"end":184,"start":10}],"match_end":184,"match_start":10,"name":"rab_sub_5"},{"dbname":"PRINTS","description":"Transforming protein P21 ras signature","id":"PR00449","locations":[{"end":30,"start":9},{"end":71,"start":32},{"end":124,"start":111},{"end":181,"start":159}],"match_end":181,"match_start":9,"name":"RASTRNSFRMNG"},{"dbname":"FUNFAM","description":"RHO family GTPase Rho2","id":"G3DSA:3.40.50.300:FF:000573","locations":[{"end":185,"start":1}],"match_end":185,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":181,"start":9}],"match_end":181,"match_start":9,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":185,"start":3}],"match_end":185,"match_start":3},{"dbname":"PANTHER","id":"PTHR24072","interpro_description":"Small GTPase Rho","interpro_id":"IPR003578","interpro_name":"Small_GTPase_Rho","locations":[{"end":190,"start":8}],"match_end":190,"match_start":8,"name":"RHO FAMILY GTPASE"},{"dbname":"NCBIFAM","description":"small GTP-binding protein domain","id":"TIGR00231","interpro_description":"Small GTP-binding domain","interpro_id":"IPR005225","interpro_name":"Small_GTP-bd","locations":[{"end":162,"start":9}],"match_end":162,"match_start":9,"name":"small_GTP"}],"location":{"chromosome_name":"supercont5.1","end_pos":3369621,"start_pos":3368508,"strand":"reverse"},"name":"rho2","ortholog_annotations":[{"gene_uniquename":"SJAG_00424","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:667","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00424","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:668","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00424","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:669","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00424","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00424","ortholog_taxonid":4932,"ortholog_uniquename":"YNL090W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00424","ortholog_taxonid":4932,"ortholog_uniquename":"YNL090W","reference_uniquename":"PMID:26896847"}],"product":"Rho family GTPase Rho2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525"],"not-binding":["GO:0043539","GO:0003924"]}},"subset_termids":["GO:0005886","GO:0098772","GO:0007163","GO:0071554","GO:0005829","GO:0003924","GO:0005634","GO:0030036","GO:0005975","GO:0030234","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003924":null,"GO:0005525":null,"GO:0005634":null,"GO:0005829":null,"GO:0005886":null,"GO:0030950":null,"GO:0032153":null,"GO:0032956":null,"GO:0035840":null,"GO:0035841":null,"GO:0043539":null,"GO:0070610":null,"GO:1902660":null,"GO:1903139":null,"MONDO:0032884":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00424.1"],"transcripts_by_uniquename":{"SJAG_00424.1":null},"uniprot_identifier":"B6JVL0","uniquename":"SJAG_00424"}


id: SJAG_00425
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91289],"is_not":false,"summary":null,"term":"GO:0071028"}],"cellular_component":[{"annotations":[80970],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[91288],"is_not":false,"summary":null,"term":"GO:0005681"}],"molecular_function":[{"annotations":[80971],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[91291],"is_not":false,"summary":null,"term":"GO:0008143"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00425","GOA:B6JVL1","EnsemblGenomes-Tr:EEB05412","InterPro:IPR012677","InterPro:IPR035979","UniProtKB/TrEMBL:B6JVL1","InterPro:IPR000504"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":377,"start":162}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"},{"name":"bbl1","uniquename":"SJAG_00426"},{"name":"srp2","uniquename":"SJAG_00425"},{"name":"rho2","uniquename":"SJAG_00424"},{"name":"nst1","uniquename":"SJAG_00423"},{"uniquename":"SJAG_00422"},{"name":"tbp1","uniquename":"SJAG_00421"},{"uniquename":"SJAG_00420"}],"genes_by_uniquename":{"HGNC:10786":null,"HGNC:10787":null,"HGNC:10788":null,"SJAG_00425":null,"SPAC16.02c":null,"YDR432W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":67,"start":6},{"end":163,"start":99}],"match_end":163,"match_start":6,"name":"RRM_1"},{"dbname":"CDD","description":"RRM2_SRSF1_4_like","id":"cd12339","locations":[{"end":166,"start":97}],"match_end":166,"match_start":97,"name":"RRM2_SRSF1_4_like"},{"dbname":"CDD","description":"RRM1_SRSF4_like","id":"cd12337","locations":[{"end":74,"start":5}],"match_end":74,"match_start":5,"name":"RRM1_SRSF4_like"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":74,"start":4},{"end":170,"start":97}],"match_end":170,"match_start":4,"name":"RRM"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":70,"start":5},{"end":166,"start":98}],"match_end":166,"match_start":5,"name":"rrm1_1"},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":165,"start":4}],"match_end":165,"match_start":4,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":85,"start":1},{"end":168,"start":96}],"match_end":168,"match_start":1},{"dbname":"PANTHER","id":"PTHR23003","interpro_description":"RRT5/SRSF/Splicing Factor SR","interpro_id":"IPR050374","interpro_name":"RRT5_SRSF_SR","locations":[{"end":359,"start":2}],"match_end":359,"match_start":2,"name":"RNA RECOGNITION MOTIF  RRM  DOMAIN CONTAINING PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":377,"start":162}],"match_end":377,"match_start":162,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":362,"start":338}],"match_end":362,"match_start":338,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":289,"start":193},{"end":307,"start":298}],"match_end":307,"match_start":193,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":192,"start":182}],"match_end":192,"match_start":182,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3367543,"start_pos":3365825,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":86,"start":71}},{"range":{"end":306,"start":179}},{"range":{"end":368,"start":337}}],"name":"srp2","ortholog_annotations":[{"gene_uniquename":"SJAG_00425","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10786","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00425","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10787","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00425","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10788","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00425","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00425","ortholog_taxonid":4932,"ortholog_uniquename":"YDR432W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00425","ortholog_taxonid":4932,"ortholog_uniquename":"YDR432W","reference_uniquename":"PMID:26896847"}],"product":"guard protein for 5'-capping of pre-mRNAs Srp2/Npl3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008143","GO:0003729"]}},"subset_termids":["GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003729":null,"GO:0005681":null,"GO:0005737":null,"GO:0008143":null,"GO:0071028":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00425.1"],"transcripts_by_uniquename":{"SJAG_00425.1":null},"uniprot_identifier":"B6JVL1","uniquename":"SJAG_00425"}


id: SJAG_00426
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[121219],"is_not":false,"summary":null,"term":"GO:0016024"}],"cellular_component":[{"annotations":[121220],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[77798],"is_not":false,"summary":null,"term":"GO:0005789"}],"molecular_function":[{"annotations":[121218],"is_not":false,"summary":null,"term":"GO:0004605"}],"single_locus_phenotype":[{"annotations":[121222],"is_not":false,"summary":null,"term":"FYPO:0000356"},{"annotations":[121221],"is_not":false,"summary":null,"term":"FYPO:0006433"},{"annotations":[121224],"is_not":false,"summary":null,"term":"FYPO:0004695"},{"annotations":[121223],"is_not":false,"summary":null,"term":"FYPO:0002227"},{"annotations":[121225],"is_not":false,"summary":null,"term":"FYPO:0001357"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00426","GOA:B6JVL2","EnsemblGenomes-Tr:EEB05413","InterPro:IPR000374","UniProtKB/TrEMBL:B6JVL2","InterPro:IPR016720"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":21,"start":1}}],"feature_publications":[{"reference_uniquename":"PMID:25318672","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"},{"name":"bbl1","uniquename":"SJAG_00426"},{"name":"srp2","uniquename":"SJAG_00425"},{"name":"rho2","uniquename":"SJAG_00424"},{"name":"nst1","uniquename":"SJAG_00423"},{"uniquename":"SJAG_00422"},{"name":"tbp1","uniquename":"SJAG_00421"}],"genes_by_uniquename":{"HGNC:1800":null,"HGNC:1801":null,"SJAG_00426":null,"SPBC13A2.03":null,"YBR029C":null},"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cytidylyltransferase family","id":"PF01148","locations":[{"end":389,"start":59}],"match_end":389,"match_start":59,"name":"CTP_transf_1"},{"dbname":"PROSITE_PATTERNS","description":"Phosphatidate cytidylyltransferase signature.","id":"PS01315","interpro_description":"Phosphatidate cytidylyltransferase","interpro_id":"IPR000374","interpro_name":"PC_trans","locations":[{"end":373,"start":347}],"match_end":373,"match_start":347,"name":"CDS"},{"dbname":"PANTHER","id":"PTHR13773","interpro_description":"Phosphatidate cytidylyltransferase, eukaryota","interpro_id":"IPR016720","interpro_name":"PC_Trfase_euk","locations":[{"end":430,"start":25}],"match_end":430,"match_start":25,"name":"PHOSPHATIDATE CYTIDYLYLTRANSFERASE"},{"dbname":"PIRSF","id":"PIRSF018269","interpro_description":"Phosphatidate cytidylyltransferase, eukaryota","interpro_id":"IPR016720","interpro_name":"PC_Trfase_euk","locations":[{"end":432,"start":1}],"match_end":432,"match_start":1,"name":"CDP-DAG_synth_e"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":21,"start":1}],"match_end":21,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":19,"start":10}],"match_end":19,"match_start":10,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3364554,"start_pos":3363092,"strand":"reverse"},"name":"bbl1","ortholog_annotations":[{"gene_uniquename":"SJAG_00426","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1800","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00426","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1801","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00426","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC13A2.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00426","ortholog_taxonid":4932,"ortholog_uniquename":"YBR029C","reference_uniquename":"PMID:29761456"}],"product":"ER phosphatidate cytidylyltransferase Bbl1","references_by_uniquename":{"GO_REF:0000033":null,"PMID:21511999":null,"PMID:25318672":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004605"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0002227","FYPO:0006433","FYPO:0004695","FYPO:0000356"],"population_phenotype":["FYPO:0001357"]}},"subset_termids":["GO:0016779","FYPO:0001320","GO:0005789","GO:0005783","GO:0006629","FYPO:0000139","FYPO:0002058"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO:0000356":null,"FYPO:0001357":null,"FYPO:0002227":null,"FYPO:0004695":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null,"GO:0004605":null,"GO:0005783":null,"GO:0005789":null,"GO:0008654":null,"GO:0016024":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":84,"start":62}},{"assigned_by":"TMHMM","range":{"end":173,"start":156}},{"assigned_by":"TMHMM","range":{"end":204,"start":185}},{"assigned_by":"TMHMM","range":{"end":231,"start":209}},{"assigned_by":"TMHMM","range":{"end":270,"start":251}},{"assigned_by":"TMHMM","range":{"end":346,"start":324}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00426.1"],"transcripts_by_uniquename":{"SJAG_00426.1":null},"uniprot_identifier":"B6JVL2","uniquename":"SJAG_00426"}


id: SJAG_00427
data:
  {"coiled_coil_coords":[{"range":{"end":38,"start":18}}],"cv_annotations":{"biological_process":[{"annotations":[81751],"is_not":false,"summary":null,"term":"GO:0015937"}],"cellular_component":[{"annotations":[81749],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[81748],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[70840],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[81750],"is_not":false,"summary":null,"term":"GO:0004594"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVL3","GOA:B6JVL3","EnsemblGenomes-Gn:SJAG_00427","EnsemblGenomes-Tr:EEB05414","InterPro:IPR004567"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"},{"name":"bbl1","uniquename":"SJAG_00426"},{"name":"srp2","uniquename":"SJAG_00425"},{"name":"rho2","uniquename":"SJAG_00424"},{"name":"nst1","uniquename":"SJAG_00423"},{"uniquename":"SJAG_00422"}],"genes_by_uniquename":{"HGNC:19365":null,"SJAG_00427":null,"SPBC4B4.01c":null,"YDR531W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Fumble","id":"PF03630","interpro_description":"Type II pantothenate kinase","interpro_id":"IPR004567","interpro_name":"Type_II_PanK","locations":[{"end":405,"start":73}],"match_end":405,"match_start":73,"name":"Fumble"},{"dbname":"CDD","description":"ASKHA_NBD_PanK-II_Pank4","id":"cd24123","locations":[{"end":404,"start":73}],"match_end":404,"match_start":73,"name":"ASKHA_NBD_PanK-II_Pank4"},{"dbname":"FUNFAM","description":"pantothenate kinase 2, mitochondrial","id":"G3DSA:3.30.420.40:FF:000025","locations":[{"end":386,"start":206}],"match_end":386,"match_start":206},{"dbname":"SUPERFAMILY","id":"SSF53067","interpro_description":"ATPase, nucleotide binding domain","interpro_id":"IPR043129","interpro_name":"ATPase_NBD","locations":[{"end":406,"start":72}],"match_end":406,"match_start":72,"name":"Actin-like ATPase domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.420.40","locations":[{"end":388,"start":209}],"match_end":388,"match_start":209},{"dbname":"GENE3D","id":"G3DSA:3.30.420.510","locations":[{"end":208,"start":68}],"match_end":208,"match_start":68},{"dbname":"PANTHER","id":"PTHR12280","interpro_description":"Type II pantothenate kinase","interpro_id":"IPR004567","interpro_name":"Type_II_PanK","locations":[{"end":406,"start":55}],"match_end":406,"match_start":55,"name":"PANTOTHENATE KINASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":38,"start":18}],"match_end":38,"match_start":18,"name":"Coil"},{"dbname":"NCBIFAM","description":"type II pantothenate kinase","id":"TIGR00555","interpro_description":"Type II pantothenate kinase","interpro_id":"IPR004567","interpro_name":"Type_II_PanK","locations":[{"end":404,"start":73}],"match_end":404,"match_start":73,"name":"panK_eukar"}],"location":{"chromosome_name":"supercont5.1","end_pos":3362203,"start_pos":3360696,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":104,"start":90}},{"range":{"end":262,"start":245}}],"name":"ptk1","ortholog_annotations":[{"gene_uniquename":"SJAG_00427","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19365","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00427","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC4B4.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00427","ortholog_taxonid":4932,"ortholog_uniquename":"YDR531W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00427","ortholog_taxonid":4932,"ortholog_uniquename":"YDR531W","reference_uniquename":"PMID:26896847"}],"product":"fumble family pantothenate kinase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004594"]}},"subset_termids":["GO:0055086","GO:0006790","GO:0005829","GO:0005634","GO:0016301"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004594":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0015937":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00427.1"],"transcripts_by_uniquename":{"SJAG_00427.1":null},"uniprot_identifier":"B6JVL3","uniquename":"SJAG_00427"}


id: SJAG_00428
data:
  {"coiled_coil_coords":[{"range":{"end":199,"start":179}}],"cv_annotations":{"biological_process":[{"annotations":[112583],"is_not":false,"summary":null,"term":"GO:0000959"}],"cellular_component":[{"annotations":[72679],"is_not":false,"summary":null,"term":"GO:0005741"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVL4","EnsemblGenomes-Gn:SJAG_00428","EnsemblGenomes-Tr:EEB05415","InterPro:IPR013946"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"},{"name":"bbl1","uniquename":"SJAG_00426"},{"name":"srp2","uniquename":"SJAG_00425"},{"name":"rho2","uniquename":"SJAG_00424"},{"name":"nst1","uniquename":"SJAG_00423"}],"genes_by_uniquename":{"SJAG_00428":null,"SPBC4B4.02c":null,"YPR155C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ATP synthase regulation protein NCA2","id":"PF08637","interpro_description":"Nuclear control of ATP synthase 2","interpro_id":"IPR013946","interpro_name":"NCA2","locations":[{"end":580,"start":306}],"match_end":580,"match_start":306,"name":"NCA2"},{"dbname":"PANTHER","id":"PTHR28234","interpro_description":"Nuclear control of ATP synthase 2","interpro_id":"IPR013946","interpro_name":"NCA2","locations":[{"end":583,"start":19}],"match_end":583,"match_start":19,"name":"NUCLEAR CONTROL OF ATPASE PROTEIN 2"},{"dbname":"COILS","id":"Coil","locations":[{"end":199,"start":179}],"match_end":199,"match_start":179,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3360419,"start_pos":3358662,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":181,"start":170}}],"name":"nca2","ortholog_annotations":[{"gene_uniquename":"SJAG_00428","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC4B4.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00428","ortholog_taxonid":4932,"ortholog_uniquename":"YPR155C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00428","ortholog_taxonid":4932,"ortholog_uniquename":"YPR155C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial protein Nca2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000959":null,"GO:0005741":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00428.1"],"transcripts_by_uniquename":{"SJAG_00428.1":null},"uniprot_identifier":"B6JVL4","uniquename":"SJAG_00428"}


id: SJAG_00429
data:
  {"alleles_by_uniquename":{"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"}},"coiled_coil_coords":[{"range":{"end":38,"start":18}},{"range":{"end":123,"start":78}},{"range":{"end":151,"start":131}}],"cv_annotations":{"biological_process":[{"annotations":[102768],"is_not":false,"summary":null,"term":"GO:0031573"},{"annotations":[102769],"is_not":false,"summary":null,"term":"GO:0000723"}],"cellular_component":[{"annotations":[102765],"is_not":false,"summary":null,"term":"GO:0070310"},{"annotations":[102766],"is_not":false,"summary":null,"term":"GO:0140445"}],"single_locus_phenotype":[{"annotations":[121192],"is_not":false,"summary":null,"term":"FYPO:0007782"},{"annotations":[121212],"is_not":false,"summary":null,"term":"FYPO:0000085"},{"annotations":[121214],"is_not":false,"summary":null,"term":"FYPO:0001234"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00429","GOA:B6JVL5","EnsemblGenomes-Tr:EEB05416","InterPro:IPR018622","UniProtKB/TrEMBL:B6JVL5"],"deletion_viability":"viable","disordered_region_coords":[{"range":{"end":221,"start":197}}],"feature_publications":[{"reference_uniquename":"PMID:23090706","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"},{"name":"bbl1","uniquename":"SJAG_00426"},{"name":"srp2","uniquename":"SJAG_00425"},{"name":"rho2","uniquename":"SJAG_00424"}],"genes_by_uniquename":{"HGNC:33499":null,"SJAG_00429":null,"SPAC9E9.08":null,"YDR499W":null},"genotypes_by_uniquename":{"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DNA damage checkpoint protein","id":"PF09798","interpro_description":"DNA damage checkpoint protein, Lcd1","interpro_id":"IPR018622","interpro_name":"DNA_damage_chkpnt_Lcd1","locations":[{"end":342,"start":76}],"match_end":342,"match_start":76,"name":"LCD1"},{"dbname":"COILS","id":"Coil","locations":[{"end":38,"start":18},{"end":123,"start":78},{"end":151,"start":131}],"match_end":151,"match_start":18,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":221,"start":197}],"match_end":221,"match_start":197,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3358481,"start_pos":3356594,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":149,"start":135}},{"range":{"end":199,"start":193}},{"range":{"end":239,"start":228}}],"name":"rad26","ortholog_annotations":[{"gene_uniquename":"SJAG_00429","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:33499","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00429","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9E9.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00429","ortholog_taxonid":4932,"ortholog_uniquename":"YDR499W","reference_uniquename":"PMID:29761456"}],"product":"ATRIP, ATR checkpoint kinase regulatory subunit Rad26","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:23090706":null,"PMID:29761456":null},"split_by_parent_groups":{"single_locus_phenotype":{"cell_phenotype":["FYPO:0007782"],"population_phenotype":["FYPO:0000085","FYPO:0001234"]}},"subset_termids":["FYPO:0000139","FYPO:0002683","GO:0023052","GO:0005634","GO:0005694","GO:0032200","FYPO:0002058"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0000085":null,"FYPO:0001234":null,"FYPO:0007782":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"GO:0000723":null,"GO:0031573":null,"GO:0070310":null,"GO:0140445":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00429.1"],"transcripts_by_uniquename":{"SJAG_00429.1":null},"uniprot_identifier":"B6JVL5","uniquename":"SJAG_00429"}


id: SJAG_00430
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73148],"is_not":false,"summary":null,"term":"GO:0006887"},{"annotations":[102760],"is_not":false,"summary":null,"term":"GO:0006893"},{"annotations":[102761],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[102762],"is_not":false,"summary":null,"term":"GO:0006906"}],"cellular_component":[{"annotations":[102752],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[73146],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[102755],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[102756],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[73147],"is_not":false,"summary":null,"term":"GO:0005886"},{"annotations":[102758],"is_not":false,"summary":null,"term":"GO:0005628"}],"molecular_function":[{"annotations":[59086],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[73145],"is_not":false,"summary":null,"term":"GO:0003924"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05417","InterPro:IPR027417","UniProtKB/TrEMBL:B6JVL6","GOA:B6JVL6","InterPro:IPR001806","EnsemblGenomes-Gn:SJAG_00430","InterPro:IPR005225"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"},{"name":"bbl1","uniquename":"SJAG_00426"},{"name":"srp2","uniquename":"SJAG_00425"}],"genes_by_uniquename":{"HGNC:30273":null,"HGNC:7007":null,"HGNC:9759":null,"HGNC:9762":null,"SJAG_00430":null,"SPAC9E9.07c":null,"YFL005W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ras family","id":"PF00071","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":171,"start":11}],"match_end":171,"match_start":11,"name":"Ras"},{"dbname":"CDD","description":"Rab8_Rab10_Rab13_like","id":"cd01867","locations":[{"end":173,"start":7}],"match_end":173,"match_start":7,"name":"Rab8_Rab10_Rab13_like"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Rab1 family profile.","id":"PS51419","locations":[{"end":200,"start":5}],"match_end":200,"match_start":5,"name":"RAB"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Rho family profile.","id":"PS51420","locations":[{"end":171,"start":3}],"match_end":171,"match_start":3,"name":"RHO"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Ras family profile.","id":"PS51421","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":200,"start":3}],"match_end":200,"match_start":3,"name":"RAS"},{"dbname":"SMART","id":"SM00174","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":173,"start":12}],"match_end":173,"match_start":12,"name":"rho_sub_3"},{"dbname":"SMART","id":"SM00173","locations":[{"end":173,"start":11}],"match_end":173,"match_start":11,"name":"ras_sub_4"},{"dbname":"SMART","id":"SM00176","locations":[{"end":198,"start":15}],"match_end":198,"match_start":15,"name":"ran_sub_2"},{"dbname":"SMART","id":"SM00175","locations":[{"end":173,"start":10}],"match_end":173,"match_start":10,"name":"rab_sub_5"},{"dbname":"PRINTS","description":"Transforming protein P21 ras signature","id":"PR00449","locations":[{"end":31,"start":10},{"end":49,"start":33},{"end":73,"start":51},{"end":126,"start":113},{"end":170,"start":148}],"match_end":170,"match_start":10,"name":"RASTRNSFRMNG"},{"dbname":"FUNFAM","description":"Secretion related GTPase srgA","id":"G3DSA:3.40.50.300:FF:000363","locations":[{"end":200,"start":3}],"match_end":200,"match_start":3},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":178,"start":5}],"match_end":178,"match_start":5,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":200,"start":2}],"match_end":200,"match_start":2},{"dbname":"PANTHER","id":"PTHR47980","interpro_description":"Small GTPase superfamily, Rab","interpro_id":"IPR050305","interpro_name":"Small_GTPase_Rab","locations":[{"end":200,"start":3}],"match_end":200,"match_start":3,"name":"LD44762P"},{"dbname":"NCBIFAM","description":"small GTP-binding protein domain","id":"TIGR00231","interpro_description":"Small GTP-binding domain","interpro_id":"IPR005225","interpro_name":"Small_GTP-bd","locations":[{"end":163,"start":8}],"match_end":163,"match_start":8,"name":"small_GTP"}],"location":{"chromosome_name":"supercont5.1","end_pos":3355767,"start_pos":3354887,"strand":"reverse"},"name":"ypt2","ortholog_annotations":[{"gene_uniquename":"SJAG_00430","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30273","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00430","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7007","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00430","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9759","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00430","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9762","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00430","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9E9.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00430","ortholog_taxonid":4932,"ortholog_uniquename":"YFL005W","reference_uniquename":"PMID:29761456"}],"product":"GTPase Ypt2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525"],"not-binding":["GO:0003924"]}},"subset_termids":["GO:0016192","GO:0005634","GO:0015630","GO:0003924","GO:0005628","GO:0061024","GO:0005768","GO:0005816","GO:0005886","GO:0005829","GO:0031410"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003924":null,"GO:0005525":null,"GO:0005628":null,"GO:0005634":null,"GO:0005768":null,"GO:0005829":null,"GO:0005886":null,"GO:0006886":null,"GO:0006887":null,"GO:0006893":null,"GO:0006906":null,"GO:0035974":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00430.1"],"transcripts_by_uniquename":{"SJAG_00430.1":null},"uniprot_identifier":"B6JVL6","uniquename":"SJAG_00430"}


id: SJAG_00432
data:
  {"cv_annotations":{"PSI-MOD":[{"annotations":[82331],"is_not":false,"summary":null,"term":"MOD:00128"}],"biological_process":[{"annotations":[78795],"is_not":false,"summary":null,"term":"GO:0009088"}],"cellular_component":[{"annotations":[102747],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102748],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[66802],"is_not":false,"summary":null,"term":"GO:0030170"},{"annotations":[78796],"is_not":false,"summary":null,"term":"GO:0004795"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05418","UniProtKB/TrEMBL:B6JVL7","InterPro:IPR004450","InterPro:IPR001926","EnsemblGenomes-Gn:SJAG_00432","InterPro:IPR036052","InterPro:IPR037158","InterPro:IPR029144","InterPro:IPR000634","GOA:B6JVL7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"},{"name":"bbl1","uniquename":"SJAG_00426"}],"genes_by_uniquename":{"HGNC:26160":null,"SJAG_00432":null,"SPAC9E9.06c":null,"YCR053W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Threonine synthase, C-terminal","id":"PF24857","locations":[{"end":506,"start":423}],"match_end":506,"match_start":423,"name":"THR4_C"},{"dbname":"PFAM","description":"Threonine synthase N terminus","id":"PF14821","interpro_description":"Threonine synthase, N-terminal","interpro_id":"IPR029144","interpro_name":"Thr_synth_N","locations":[{"end":85,"start":6}],"match_end":85,"match_start":6,"name":"Thr_synth_N"},{"dbname":"PFAM","description":"Pyridoxal-phosphate dependent enzyme","id":"PF00291","interpro_description":"Tryptophan synthase beta chain-like, PALP domain","interpro_id":"IPR001926","interpro_name":"TrpB-like_PALP","locations":[{"end":336,"start":94}],"match_end":336,"match_start":94,"name":"PALP"},{"dbname":"CDD","description":"Thr-synth_2","id":"cd01560","locations":[{"end":504,"start":6}],"match_end":504,"match_start":6,"name":"Thr-synth_2"},{"dbname":"PROSITE_PATTERNS","description":"Serine/threonine dehydratases pyridoxal-phosphate attachment site.","id":"PS00165","interpro_description":"Serine/threonine dehydratase, pyridoxal-phosphate-binding site","interpro_id":"IPR000634","interpro_name":"Ser/Thr_deHydtase_PyrdxlP-BS","locations":[{"end":121,"start":107}],"match_end":121,"match_start":107,"name":"DEHYDRATASE_SER_THR"},{"dbname":"FUNFAM","description":"THR4p Threonine synthase","id":"G3DSA:3.40.50.1100:FF:000046","locations":[{"end":480,"start":229}],"match_end":480,"match_start":229},{"dbname":"FUNFAM","description":"THR4p Threonine synthase","id":"G3DSA:3.90.1380.10:FF:000003","locations":[{"end":91,"start":5}],"match_end":91,"match_start":5},{"dbname":"SUPERFAMILY","id":"SSF53686","interpro_description":"Tryptophan synthase beta chain-like, PALP domain superfamily","interpro_id":"IPR036052","interpro_name":"TrpB-like_PALP_sf","locations":[{"end":506,"start":5}],"match_end":506,"match_start":5,"name":"Tryptophan synthase beta subunit-like PLP-dependent enzymes"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1100","interpro_description":"Tryptophan synthase beta chain-like, PALP domain superfamily","interpro_id":"IPR036052","interpro_name":"TrpB-like_PALP_sf","locations":[{"end":490,"start":103}],"match_end":490,"match_start":103},{"dbname":"GENE3D","id":"G3DSA:3.90.1380.10","interpro_description":"Threonine synthase, N-terminal domain superfamily","interpro_id":"IPR037158","interpro_name":"Thr_synth_N_sf","locations":[{"end":91,"start":1}],"match_end":91,"match_start":1},{"dbname":"PANTHER","id":"PTHR42690","interpro_description":"Threonine Synthase","interpro_id":"IPR051166","interpro_name":"Threonine_Synthase","locations":[{"end":514,"start":6}],"match_end":514,"match_start":6,"name":"THREONINE SYNTHASE FAMILY MEMBER"},{"dbname":"NCBIFAM","description":"threonine synthase","id":"TIGR00260","interpro_description":"Threonine synthase-like","interpro_id":"IPR004450","interpro_name":"Thr_synthase-like","locations":[{"end":470,"start":72}],"match_end":470,"match_start":72,"name":"thrC"}],"location":{"chromosome_name":"supercont5.1","end_pos":3354047,"start_pos":3352416,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00432","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26160","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00432","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9E9.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00432","ortholog_taxonid":4932,"ortholog_uniquename":"YCR053W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00432","ortholog_taxonid":4932,"ortholog_uniquename":"YCR053W","reference_uniquename":"PMID:26896847"}],"product":"threonine synthase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030170"],"not-binding":["GO:0004795"]}},"subset_termids":["GO:0005634","GO:0006520","GO:0005829","GO:0016829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004795":null,"GO:0005634":null,"GO:0005829":null,"GO:0009088":null,"GO:0030170":null,"MOD:00128":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00432.1"],"transcripts_by_uniquename":{"SJAG_00432.1":null},"uniprot_identifier":"B6JVL7","uniquename":"SJAG_00432"}


id: SJAG_00433
data:
  {"coiled_coil_coords":[{"range":{"end":267,"start":247}}],"cv_annotations":{"biological_process":[{"annotations":[102745],"is_not":false,"summary":null,"term":"GO:0007064"},{"annotations":[102746],"is_not":false,"summary":null,"term":"GO:0007063"}],"cellular_component":[{"annotations":[102744],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00433","UniProtKB/TrEMBL:B6JVL8","EnsemblGenomes-Tr:EEB05419"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":103,"start":1}},{"range":{"end":249,"start":135}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"}],"genes_by_uniquename":{"HGNC:14626":null,"SJAG_00433":null,"SPAC9E9.05":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":267,"start":247}],"match_end":267,"match_start":247,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":103,"start":1},{"end":249,"start":135}],"match_end":249,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":66,"start":49},{"end":103,"start":74}],"match_end":103,"match_start":49,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":249,"start":239}],"match_end":249,"match_start":239,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":156,"start":143},{"end":202,"start":193}],"match_end":202,"match_start":143,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3352161,"start_pos":3351346,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":75,"start":48}},{"range":{"end":102,"start":78}},{"range":{"end":226,"start":173}}],"name":"sor1","ortholog_annotations":[{"gene_uniquename":"SJAG_00433","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14626","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00433","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9E9.05","reference_uniquename":"PMID:21511999"}],"product":"sororin, WAPL antagonist Sor1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0007063":null,"GO:0007064":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00433.1"],"transcripts_by_uniquename":{"SJAG_00433.1":null},"uniprot_identifier":"B6JVL8","uniquename":"SJAG_00433"}


id: SJAG_00434
data:
  {"cv_annotations":{"biological_process":[{"annotations":[79376],"is_not":false,"summary":null,"term":"GO:1990569"},{"annotations":[67585],"is_not":false,"summary":null,"term":"GO:0015790"}],"cellular_component":[{"annotations":[106919],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[79375],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[79374],"is_not":false,"summary":null,"term":"GO:0000139"}],"molecular_function":[{"annotations":[79372],"is_not":false,"summary":null,"term":"GO:0005462"},{"annotations":[79373],"is_not":false,"summary":null,"term":"GO:0005464"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00434","EnsemblGenomes-Tr:EEB05420","GOA:B6JVL9","InterPro:IPR013657","UniProtKB/TrEMBL:B6JVL9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"}],"genes_by_uniquename":{"HGNC:20584":null,"SJAG_00434":null,"SPBC1734.09":null,"YEL004W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"UAA transporter family","id":"PF08449","interpro_description":"SLC35B1-4/HUT1","interpro_id":"IPR013657","interpro_name":"SCL35B1-4/HUT1","locations":[{"end":303,"start":2}],"match_end":303,"match_start":2,"name":"UAA"},{"dbname":"SUPERFAMILY","id":"SSF103481","locations":[{"end":139,"start":60}],"match_end":139,"match_start":60,"name":"Multidrug resistance efflux transporter EmrE"},{"dbname":"PANTHER","id":"PTHR10778","interpro_description":"SLC35B1-4/HUT1","interpro_id":"IPR013657","interpro_name":"SCL35B1-4/HUT1","locations":[{"end":312,"start":7}],"match_end":312,"match_start":7,"name":"SOLUTE CARRIER FAMILY 35 MEMBER B"},{"dbname":"NCBIFAM","description":"solute carrier family 35 transporter","id":"TIGR00803","locations":[{"end":301,"start":88}],"match_end":301,"match_start":88,"name":"nst"}],"location":{"chromosome_name":"supercont5.1","end_pos":3350937,"start_pos":3349987,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":82,"start":67}}],"name":"yea4","ortholog_annotations":[{"gene_uniquename":"SJAG_00434","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20584","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00434","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00434","ortholog_taxonid":4932,"ortholog_uniquename":"YEL004W","reference_uniquename":"PMID:29761456"}],"product":"ER UDP-N-acetylglucosamine transmembrane transporter","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0005464","GO:0005462"]}},"subset_termids":["GO:0005789","GO:0022857","GO:0055085","GO:0005794","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0005462":null,"GO:0005464":null,"GO:0005789":null,"GO:0015790":null,"GO:0051286":null,"GO:1990569":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":52,"start":30}},{"assigned_by":"TMHMM","range":{"end":87,"start":65}},{"assigned_by":"TMHMM","range":{"end":114,"start":92}},{"assigned_by":"TMHMM","range":{"end":138,"start":121}},{"assigned_by":"TMHMM","range":{"end":175,"start":153}},{"assigned_by":"TMHMM","range":{"end":205,"start":188}},{"assigned_by":"TMHMM","range":{"end":244,"start":225}},{"assigned_by":"TMHMM","range":{"end":279,"start":257}},{"assigned_by":"TMHMM","range":{"end":305,"start":283}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00434.1"],"transcripts_by_uniquename":{"SJAG_00434.1":null},"uniprot_identifier":"B6JVL9","uniquename":"SJAG_00434"}


id: SJAG_00435
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106929],"is_not":false,"summary":null,"term":"GO:0180010"},{"annotations":[76059],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[76058],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[76057],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[76061],"is_not":false,"summary":null,"term":"GO:0000151"}],"molecular_function":[{"annotations":[76062],"is_not":false,"summary":null,"term":"GO:0030332"},{"annotations":[76060],"is_not":false,"summary":null,"term":"GO:0031624"},{"annotations":[76063],"is_not":false,"summary":null,"term":"GO:0061630"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00435","EnsemblGenomes-Tr:EEB05421","InterPro:IPR019193","UniProtKB/TrEMBL:B6JVM0"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"}],"genes_by_uniquename":{"HGNC:21381":null,"SJAG_00435":null,"SPBC1734.10c":null,"YJR141W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"HECT-like Ubiquitin-conjugating enzyme (E2)-binding","id":"PF09814","interpro_description":"Ubiquitin-conjugating enzyme E2-binding protein","interpro_id":"IPR019193","interpro_name":"UBQ-conj_enz_E2-bd_prot","locations":[{"end":328,"start":32}],"match_end":328,"match_start":32,"name":"HECT_2"},{"dbname":"PANTHER","id":"PTHR31531","interpro_description":"Ubiquitin-conjugating enzyme E2-binding protein","interpro_id":"IPR019193","interpro_name":"UBQ-conj_enz_E2-bd_prot","locations":[{"end":330,"start":68}],"match_end":330,"match_start":68,"name":"E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER"}],"location":{"chromosome_name":"supercont5.1","end_pos":3349954,"start_pos":3348624,"strand":"forward"},"name":"ipa1","ortholog_annotations":[{"gene_uniquename":"SJAG_00435","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21381","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00435","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00435","ortholog_taxonid":4932,"ortholog_uniquename":"YJR141W","reference_uniquename":"PMID:29761456"}],"product":"cleavage and polyadenylation HECT-type ubiquitin-protein ligase E3 Ipa1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0031624","GO:0030332"],"not-binding":["GO:0061630"]}},"subset_termids":["GO:0016746","GO:0019787","GO:0140096","GO:0030163","GO:0016071","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000151":null,"GO:0005634":null,"GO:0005829":null,"GO:0030332":null,"GO:0031624":null,"GO:0043161":null,"GO:0061630":null,"GO:0180010":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00435.1"],"transcripts_by_uniquename":{"SJAG_00435.1":null},"uniprot_identifier":"B6JVM0","uniquename":"SJAG_00435"}


id: SJAG_00436
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106936],"is_not":false,"summary":null,"term":"GO:0034605"},{"annotations":[106937],"is_not":false,"summary":null,"term":"GO:0140455"},{"annotations":[106938],"is_not":false,"summary":null,"term":"GO:0140454"},{"annotations":[73377],"is_not":false,"summary":null,"term":"GO:0042026"}],"cellular_component":[{"annotations":[73378],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106933],"is_not":false,"summary":null,"term":"GO:0140602"},{"annotations":[106935],"is_not":false,"summary":null,"term":"GO:0140453"}],"molecular_function":[{"annotations":[59409],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[59412],"is_not":false,"summary":null,"term":"GO:0030544"},{"annotations":[106941],"is_not":false,"summary":null,"term":"GO:0140311"},{"annotations":[59411],"is_not":false,"summary":null,"term":"GO:0051082"},{"annotations":[59414],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR036410","GOA:B6JVM1","InterPro:IPR012724","InterPro:IPR002939","InterPro:IPR018253","InterPro:IPR001623","InterPro:IPR001305","InterPro:IPR036869","InterPro:IPR008971","UniProtKB/TrEMBL:B6JVM1","EnsemblGenomes-Gn:SJAG_00436","EnsemblGenomes-Tr:EEB05422"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":404,"start":370}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"}],"genes_by_uniquename":{"HGNC:14884":null,"HGNC:14885":null,"HGNC:5229":null,"SJAG_00436":null,"SPBC1734.11":null,"YNL064C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DnaJ central domain","id":"PF00684","interpro_description":"Heat shock protein DnaJ, cysteine-rich domain","interpro_id":"IPR001305","interpro_name":"HSP_DnaJ_Cys-rich_dom","locations":[{"end":202,"start":137}],"match_end":202,"match_start":137,"name":"DnaJ_CXXCXGXG"},{"dbname":"PFAM","description":"DnaJ domain","id":"PF00226","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":65,"start":7}],"match_end":65,"match_start":7,"name":"DnaJ"},{"dbname":"PFAM","description":"DnaJ C terminal domain","id":"PF01556","interpro_description":"Chaperone DnaJ, C-terminal","interpro_id":"IPR002939","interpro_name":"DnaJ_C","locations":[{"end":136,"start":112},{"end":330,"start":203}],"match_end":330,"match_start":112,"name":"DnaJ_C"},{"dbname":"CDD","description":"DnaJ_zf","id":"cd10719","interpro_description":"Heat shock protein DnaJ, cysteine-rich domain","interpro_id":"IPR001305","interpro_name":"HSP_DnaJ_Cys-rich_dom","locations":[{"end":202,"start":137}],"match_end":202,"match_start":137,"name":"DnaJ_zf"},{"dbname":"CDD","description":"DnaJ","id":"cd06257","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":57,"start":8}],"match_end":57,"match_start":8,"name":"DnaJ"},{"dbname":"CDD","description":"DnaJ_C","id":"cd10747","locations":[{"end":331,"start":108}],"match_end":331,"match_start":108,"name":"DnaJ_C"},{"dbname":"PROSITE_PATTERNS","description":"Nt-dnaJ domain signature.","id":"PS00636","interpro_description":"DnaJ domain, conserved site","interpro_id":"IPR018253","interpro_name":"DnaJ_domain_CS","locations":[{"end":64,"start":45}],"match_end":64,"match_start":45,"name":"DNAJ_1"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger CR-type profile.","id":"PS51188","interpro_description":"Heat shock protein DnaJ, cysteine-rich domain","interpro_id":"IPR001305","interpro_name":"HSP_DnaJ_Cys-rich_dom","locations":[{"end":207,"start":124}],"match_end":207,"match_start":124,"name":"ZF_CR"},{"dbname":"PROSITE_PROFILES","description":"dnaJ domain profile.","id":"PS50076","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":68,"start":6}],"match_end":68,"match_start":6,"name":"DNAJ_2"},{"dbname":"SMART","id":"SM00271","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":60,"start":5}],"match_end":60,"match_start":5,"name":"dnaj_3"},{"dbname":"PRINTS","description":"DnaJ domain signature","id":"PR00625","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":41,"start":8},{"end":79,"start":60}],"match_end":79,"match_start":8,"name":"JDOMAIN"},{"dbname":"FUNFAM","description":"DnaJ (Hsp40) homolog, subfamily A, member 2","id":"G3DSA:1.10.287.110:FF:000016","locations":[{"end":102,"start":3}],"match_end":102,"match_start":3},{"dbname":"FUNFAM","description":"DnaJ subfamily A member 2","id":"G3DSA:2.10.230.10:FF:000001","locations":[{"end":202,"start":137}],"match_end":202,"match_start":137},{"dbname":"FUNFAM","description":"DnaJ subfamily A member 2","id":"G3DSA:2.60.260.20:FF:000003","locations":[{"end":331,"start":250}],"match_end":331,"match_start":250},{"dbname":"SUPERFAMILY","id":"SSF46565","interpro_description":"Chaperone J-domain superfamily","interpro_id":"IPR036869","interpro_name":"J_dom_sf","locations":[{"end":99,"start":2}],"match_end":99,"match_start":2,"name":"Chaperone J-domain"},{"dbname":"SUPERFAMILY","id":"SSF49493","interpro_description":"HSP40/DnaJ peptide-binding","interpro_id":"IPR008971","interpro_name":"HSP40/DnaJ_pept-bd","locations":[{"end":142,"start":109},{"end":332,"start":208}],"match_end":332,"match_start":109,"name":"HSP40/DnaJ peptide-binding domain"},{"dbname":"SUPERFAMILY","id":"SSF57938","interpro_description":"Heat shock protein DnaJ, cysteine-rich domain superfamily","interpro_id":"IPR036410","interpro_name":"HSP_DnaJ_Cys-rich_dom_sf","locations":[{"end":204,"start":134}],"match_end":204,"match_start":134,"name":"DnaJ/Hsp40 cysteine-rich domain"},{"dbname":"GENE3D","id":"G3DSA:2.10.230.10","locations":[{"end":202,"start":137}],"match_end":202,"match_start":137},{"dbname":"GENE3D","id":"G3DSA:2.60.260.20","locations":[{"end":136,"start":107},{"end":243,"start":203},{"end":331,"start":252}],"match_end":331,"match_start":107},{"dbname":"GENE3D","id":"G3DSA:1.10.287.110","interpro_description":"Chaperone J-domain superfamily","interpro_id":"IPR036869","interpro_name":"J_dom_sf","locations":[{"end":102,"start":3}],"match_end":102,"match_start":3,"name":"DnaJ domain"},{"dbname":"PANTHER","id":"PTHR43888","interpro_description":"DnaJ homolog subfamily A member 1/2-like","interpro_id":"IPR044713","interpro_name":"DNJA1/2-like","locations":[{"end":364,"start":4}],"match_end":364,"match_start":4,"name":"DNAJ-LIKE-2, ISOFORM A-RELATED"},{"dbname":"HAMAP","description":"Chaperone protein DnaJ [dnaJ].","id":"MF_01152","interpro_description":"Chaperone DnaJ","interpro_id":"IPR012724","interpro_name":"DnaJ","locations":[{"end":371,"start":3}],"match_end":371,"match_start":3,"name":"DnaJ"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":404,"start":370}],"match_end":404,"match_start":370,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3347652,"start_pos":3346438,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":32,"start":21}},{"range":{"end":79,"start":67}},{"range":{"end":106,"start":89}}],"name":"mas5","ortholog_annotations":[{"gene_uniquename":"SJAG_00436","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14884","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00436","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14885","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00436","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:5229","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00436","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00436","ortholog_taxonid":4932,"ortholog_uniquename":"YNL064C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00436","ortholog_taxonid":4932,"ortholog_uniquename":"YNL064C","reference_uniquename":"PMID:26896847"}],"product":"Hsp40 family DNAJ domain protein Mas5","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051082","GO:0030544","GO:0005524","GO:0008270"],"not-binding":["GO:0140311"]}},"subset_termids":["GO:0140313","GO:0005829","GO:0006457","GO:0030163","GO:0051604","GO:0051082","GO:0005634","GO:0140311"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005829":null,"GO:0008270":null,"GO:0030544":null,"GO:0034605":null,"GO:0042026":null,"GO:0051082":null,"GO:0140311":null,"GO:0140453":null,"GO:0140454":null,"GO:0140455":null,"GO:0140602":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00436.1"],"transcripts_by_uniquename":{"SJAG_00436.1":null},"uniprot_identifier":"B6JVM1","uniquename":"SJAG_00436"}


id: SJAG_00437
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":534,"start":17}}],"cv_annotations":{"biological_process":[{"annotations":[106945],"is_not":false,"summary":null,"term":"GO:0006488"}],"cellular_component":[{"annotations":[106944],"is_not":false,"summary":null,"term":"GO:0098553"}],"molecular_function":[{"annotations":[61702],"is_not":false,"summary":null,"term":"GO:0052917"}],"mondo":[{"annotations":[87582],"is_not":false,"summary":null,"term":"MONDO:0011783"}],"sequence":[{"annotations":[82416],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["GOA:B6JVM2","EnsemblGenomes-Gn:SJAG_00437","EnsemblGenomes-Tr:EEB05423","InterPro:IPR005599","InterPro:IPR021719","UniProtKB/TrEMBL:B6JVM2","InterPro:IPR039485"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"}],"genes_by_uniquename":{"HGNC:19358":null,"SJAG_00437":null,"SPBC1734.12c":null,"YNR030W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Alg9-like mannosyltransferase family","id":"PF03901","interpro_description":"GPI mannosyltransferase","interpro_id":"IPR005599","interpro_name":"GPI_mannosylTrfase","locations":[{"end":375,"start":7}],"match_end":375,"match_start":7,"name":"Glyco_transf_22"},{"dbname":"PFAM","description":"Peptidase inhibitor I78 family","id":"PF11720","interpro_description":"Proteinase inhibitor I78","interpro_id":"IPR021719","interpro_name":"Prot_inh_I78","locations":[{"end":532,"start":501}],"match_end":532,"match_start":501,"name":"Inhibitor_I78"},{"dbname":"GENE3D","id":"G3DSA:3.30.10.10","locations":[{"end":532,"start":471}],"match_end":532,"match_start":471,"name":"Trypsin Inhibitor V, subunit A"},{"dbname":"PANTHER","id":"PTHR22760","interpro_description":"GPI mannosyltransferase","interpro_id":"IPR005599","interpro_name":"GPI_mannosylTrfase","locations":[{"end":408,"start":5}],"match_end":408,"match_start":5,"name":"GLYCOSYLTRANSFERASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":3345833,"start_pos":3344139,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":165,"start":154}}],"name":"alg12","ortholog_annotations":[{"gene_uniquename":"SJAG_00437","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19358","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00437","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00437","ortholog_taxonid":4932,"ortholog_uniquename":"YNR030W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00437","ortholog_taxonid":4932,"ortholog_uniquename":"YNR030W","reference_uniquename":"PMID:26896847"}],"product":"dolichyl pyrophosphate Man7GlcNAc2 alpha-1,6-mannosyltransferase Alg12","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":16,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0052917"]}},"subset_termids":["GO:0005783","GO:0006486","MONDO:0005066","MONDO:0024322","GO:0016757","GO:0005789"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006488":null,"GO:0052917":null,"GO:0098553":null,"MONDO:0011783":null,"SO:0000418":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":21,"start":4}},{"assigned_by":"TMHMM","range":{"end":81,"start":59}},{"assigned_by":"TMHMM","range":{"end":126,"start":109}},{"assigned_by":"TMHMM","range":{"end":153,"start":131}},{"assigned_by":"TMHMM","range":{"end":185,"start":163}},{"assigned_by":"TMHMM","range":{"end":214,"start":192}},{"assigned_by":"TMHMM","range":{"end":265,"start":243}},{"assigned_by":"TMHMM","range":{"end":287,"start":270}},{"assigned_by":"TMHMM","range":{"end":316,"start":297}},{"assigned_by":"TMHMM","range":{"end":354,"start":332}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00437.1"],"transcripts_by_uniquename":{"SJAG_00437.1":null},"uniprot_identifier":"B6JVM2","uniquename":"SJAG_00437"}


id: SJAG_00438
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106950],"is_not":false,"summary":null,"term":"GO:0042776"},{"annotations":[65144],"is_not":false,"summary":null,"term":"GO:1902600"}],"cellular_component":[{"annotations":[106947],"is_not":false,"summary":null,"term":"GO:0099617"},{"annotations":[65141],"is_not":false,"summary":null,"term":"GO:0045259"}],"molecular_function":[{"annotations":[77605],"is_not":false,"summary":null,"term":"GO:0046933"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00438","InterPro:IPR023632","InterPro:IPR000131","EnsemblGenomes-Tr:EEB05424","InterPro:IPR035968","UniProtKB/TrEMBL:B6JVM3","GOA:B6JVM3"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"}],"genes_by_uniquename":{"HGNC:833":null,"SJAG_00438":null,"SPBC1734.13":null,"YBR039W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ATP synthase","id":"PF00231","interpro_description":"ATP synthase, F1 complex, gamma subunit","interpro_id":"IPR000131","interpro_name":"ATP_synth_F1_gsu","locations":[{"end":325,"start":42}],"match_end":325,"match_start":42,"name":"ATP-synt"},{"dbname":"CDD","description":"F1-ATPase_gamma","id":"cd12151","interpro_description":"ATP synthase, F1 complex, gamma subunit","interpro_id":"IPR000131","interpro_name":"ATP_synth_F1_gsu","locations":[{"end":322,"start":41}],"match_end":322,"match_start":41,"name":"F1-ATPase_gamma"},{"dbname":"PROSITE_PATTERNS","description":"ATP synthase gamma subunit signature.","id":"PS00153","interpro_description":"ATP synthase, F1 complex, gamma subunit conserved site","interpro_id":"IPR023632","interpro_name":"ATP_synth_F1_gsu_CS","locations":[{"end":324,"start":311}],"match_end":324,"match_start":311,"name":"ATPASE_GAMMA"},{"dbname":"PRINTS","description":"ATP synthase gamma subunit signature","id":"PR00126","interpro_description":"ATP synthase, F1 complex, gamma subunit","interpro_id":"IPR000131","interpro_name":"ATP_synth_F1_gsu","locations":[{"end":121,"start":102},{"end":227,"start":210},{"end":291,"start":272},{"end":324,"start":303}],"match_end":324,"match_start":102,"name":"ATPASEGAMMA"},{"dbname":"FUNFAM","description":"ATP synthase subunit gamma","id":"G3DSA:3.40.1380.10:FF:000003","locations":[{"end":284,"start":66}],"match_end":284,"match_start":66},{"dbname":"SUPERFAMILY","id":"SSF52943","interpro_description":"ATP synthase, F1 complex, gamma subunit superfamily","interpro_id":"IPR035968","interpro_name":"ATP_synth_F1_ATPase_gsu","locations":[{"end":325,"start":41}],"match_end":325,"match_start":41,"name":"ATP synthase (F1-ATPase), gamma subunit"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.80","locations":[{"end":65,"start":44},{"end":322,"start":285}],"match_end":322,"match_start":44,"name":"ATP synthase, gamma subunit, helix hairpin domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.1380.10","locations":[{"end":284,"start":66}],"match_end":284,"match_start":66},{"dbname":"PANTHER","id":"PTHR11693","interpro_description":"ATP synthase, F1 complex, gamma subunit","interpro_id":"IPR000131","interpro_name":"ATP_synth_F1_gsu","locations":[{"end":325,"start":36}],"match_end":325,"match_start":36,"name":"ATP SYNTHASE GAMMA CHAIN"},{"dbname":"PIRSF","id":"PIRSF039089","locations":[{"end":325,"start":10}],"match_end":325,"match_start":10,"name":"ATP_synthase_gamma"},{"dbname":"NCBIFAM","description":"ATP synthase F1 subunit gamma","id":"TIGR01146","interpro_description":"ATP synthase, F1 complex, gamma subunit","interpro_id":"IPR000131","interpro_name":"ATP_synth_F1_gsu","locations":[{"end":325,"start":41}],"match_end":325,"match_start":41,"name":"ATPsyn_F1gamma"}],"location":{"chromosome_name":"supercont5.1","end_pos":3343375,"start_pos":3342323,"strand":"reverse"},"name":"atp3","ortholog_annotations":[{"gene_uniquename":"SJAG_00438","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:833","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00438","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00438","ortholog_taxonid":4932,"ortholog_uniquename":"YBR039W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00438","ortholog_taxonid":4932,"ortholog_uniquename":"YBR039W","reference_uniquename":"PMID:26896847"}],"product":"F1-FO ATP synthase gamma subunit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0046933"]}},"subset_termids":["GO:0005739","GO:0016874","GO:0006091","GO:0055086","GO:0055085","GO:0022857"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0042776":null,"GO:0045259":null,"GO:0046933":null,"GO:0099617":null,"GO:1902600":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00438.1"],"transcripts_by_uniquename":{"SJAG_00438.1":null},"uniprot_identifier":"B6JVM3","uniquename":"SJAG_00438"}


id: SJAG_00439
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75848],"is_not":false,"summary":null,"term":"GO:0007346"},{"annotations":[106958],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[75846],"is_not":false,"summary":null,"term":"GO:0000307"},{"annotations":[106954],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106955],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[75847],"is_not":false,"summary":null,"term":"GO:0019005"}],"molecular_function":[{"annotations":[75849],"is_not":false,"summary":null,"term":"GO:0061575"},{"annotations":[75845],"is_not":false,"summary":null,"term":"GO:0042393"},{"annotations":[106960],"is_not":false,"summary":null,"term":"GO:0044877"},{"annotations":[75844],"is_not":false,"summary":null,"term":"GO:0043130"},{"annotations":[106961],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVM4","EnsemblGenomes-Tr:EEB05425","InterPro:IPR036858","InterPro:IPR000789","EnsemblGenomes-Gn:SJAG_00439","GOA:B6JVM4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"}],"genes_by_uniquename":{"HGNC:19083":null,"HGNC:2000":null,"SJAG_00439":null,"SPBC1734.14c":null,"YBR135W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cyclin-dependent kinase regulatory subunit","id":"PF01111","interpro_description":"Cyclin-dependent kinase, regulatory subunit","interpro_id":"IPR000789","interpro_name":"Cyclin-dep_kinase_reg-sub","locations":[{"end":101,"start":25}],"match_end":101,"match_start":25,"name":"CKS"},{"dbname":"PROSITE_PATTERNS","description":"Cyclin-dependent kinases regulatory subunits signature 2.","id":"PS00945","interpro_description":"Cyclin-dependent kinase, regulatory subunit","interpro_id":"IPR000789","interpro_name":"Cyclin-dep_kinase_reg-sub","locations":[{"end":98,"start":88}],"match_end":98,"match_start":88,"name":"CKS_2"},{"dbname":"PROSITE_PATTERNS","description":"Cyclin-dependent kinases regulatory subunits signature 1.","id":"PS00944","interpro_description":"Cyclin-dependent kinase, regulatory subunit","interpro_id":"IPR000789","interpro_name":"Cyclin-dep_kinase_reg-sub","locations":[{"end":45,"start":27}],"match_end":45,"match_start":27,"name":"CKS_1"},{"dbname":"SMART","id":"SM01084","interpro_description":"Cyclin-dependent kinase, regulatory subunit","interpro_id":"IPR000789","interpro_name":"Cyclin-dep_kinase_reg-sub","locations":[{"end":102,"start":24}],"match_end":102,"match_start":24,"name":"CKS_2"},{"dbname":"PRINTS","description":"Cyclin-dependent kinase regulatory subunit signature","id":"PR00296","interpro_description":"Cyclin-dependent kinase, regulatory subunit","interpro_id":"IPR000789","interpro_name":"Cyclin-dep_kinase_reg-sub","locations":[{"end":53,"start":24},{"end":99,"start":70}],"match_end":99,"match_start":24,"name":"CYCLINKINASE"},{"dbname":"FUNFAM","description":"Cyclin-dependent kinases regulatory subunit","id":"G3DSA:3.30.170.10:FF:000002","locations":[{"end":108,"start":1}],"match_end":108,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF55637","interpro_description":"Cyclin-dependent kinase, regulatory subunit superfamily","interpro_id":"IPR036858","interpro_name":"Cyclin-dep_kinase_reg-sub_sf","locations":[{"end":106,"start":7}],"match_end":106,"match_start":7,"name":"Cell cycle regulatory proteins"},{"dbname":"GENE3D","id":"G3DSA:3.30.170.10","interpro_description":"Cyclin-dependent kinase, regulatory subunit superfamily","interpro_id":"IPR036858","interpro_name":"Cyclin-dep_kinase_reg-sub_sf","locations":[{"end":111,"start":1}],"match_end":111,"match_start":1},{"dbname":"PANTHER","id":"PTHR23415","locations":[{"end":107,"start":22}],"match_end":107,"match_start":22,"name":"CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7"}],"location":{"chromosome_name":"supercont5.1","end_pos":3342039,"start_pos":3341525,"strand":"forward"},"name":"suc1","ortholog_annotations":[{"gene_uniquename":"SJAG_00439","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19083","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00439","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2000","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00439","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00439","ortholog_taxonid":4932,"ortholog_uniquename":"YBR135W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00439","ortholog_taxonid":4932,"ortholog_uniquename":"YBR135W","reference_uniquename":"PMID:26896847"}],"product":"cyclin-dependent protein kinase regulatory subunit Suc1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0043130","GO:0042393","GO:0044877","GO:0008270"],"not-binding":["GO:0061575"]}},"subset_termids":["GO:0023052","GO:0005634","GO:0098772","GO:0030234","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000307":null,"GO:0005634":null,"GO:0005829":null,"GO:0007346":null,"GO:0008270":null,"GO:0019005":null,"GO:0023052":null,"GO:0042393":null,"GO:0043130":null,"GO:0044877":null,"GO:0061575":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00439.1"],"transcripts_by_uniquename":{"SJAG_00439.1":null},"uniprot_identifier":"B6JVM4","uniquename":"SJAG_00439"}


id: SJAG_00440
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106965],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[106962],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72357],"is_not":false,"summary":null,"term":"GO:0016586"}],"molecular_function":[{"annotations":[72359],"is_not":false,"summary":null,"term":"GO:0003682"}],"mondo":[{"annotations":[88612],"is_not":false,"summary":null,"term":"MONDO:0007763"}]},"dbxrefs":["InterPro:IPR036427","InterPro:IPR018359","InterPro:IPR037382","GOA:B6JVM5","EnsemblGenomes-Gn:SJAG_00440","InterPro:IPR027180","UniProtKB/TrEMBL:B6JVM5","InterPro:IPR001487","EnsemblGenomes-Tr:EEB05426"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"}],"genes_by_uniquename":{"HGNC:30064":null,"SJAG_00440":null,"SPBC1734.15":null,"YKR008W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Bromodomain","id":"PF00439","interpro_description":"Bromodomain","interpro_id":"IPR001487","interpro_name":"Bromodomain","locations":[{"end":100,"start":22},{"end":217,"start":138}],"match_end":217,"match_start":22,"name":"Bromodomain"},{"dbname":"PFAM","description":"RSC4 Ig-like domain","id":"PF22994","interpro_description":"RSC4, Ig-like domain","interpro_id":"IPR054551","interpro_name":"RSC4_Ig-like","locations":[{"end":474,"start":361}],"match_end":474,"match_start":361,"name":"RSC4_Ig_like"},{"dbname":"CDD","description":"Bromodomain","id":"cd04369","locations":[{"end":113,"start":12},{"end":228,"start":126}],"match_end":228,"match_start":12,"name":"Bromodomain"},{"dbname":"PROSITE_PATTERNS","description":"Bromodomain signature.","id":"PS00633","interpro_description":"Bromodomain, conserved site","interpro_id":"IPR018359","interpro_name":"Bromodomain_CS","locations":[{"end":206,"start":149}],"match_end":206,"match_start":149,"name":"BROMODOMAIN_1"},{"dbname":"PROSITE_PROFILES","description":"Bromodomain profile.","id":"PS50014","interpro_description":"Bromodomain","interpro_id":"IPR001487","interpro_name":"Bromodomain","locations":[{"end":96,"start":26},{"end":214,"start":144}],"match_end":214,"match_start":26,"name":"BROMODOMAIN_2"},{"dbname":"SMART","id":"SM00297","interpro_description":"Bromodomain","interpro_id":"IPR001487","interpro_name":"Bromodomain","locations":[{"end":118,"start":5},{"end":233,"start":123}],"match_end":233,"match_start":5,"name":"bromo_6"},{"dbname":"PRINTS","description":"Bromodomain signature","id":"PR00503","interpro_description":"Bromodomain","interpro_id":"IPR001487","interpro_name":"Bromodomain","locations":[{"end":59,"start":43},{"end":214,"start":177}],"match_end":214,"match_start":43,"name":"BROMODOMAIN"},{"dbname":"SUPERFAMILY","id":"SSF47370","interpro_description":"Bromodomain-like superfamily","interpro_id":"IPR036427","interpro_name":"Bromodomain-like_sf","locations":[{"end":116,"start":22},{"end":233,"start":123}],"match_end":233,"match_start":22,"name":"Bromodomain"},{"dbname":"GENE3D","id":"G3DSA:1.20.920.10","interpro_description":"Bromodomain-like superfamily","interpro_id":"IPR036427","interpro_name":"Bromodomain-like_sf","locations":[{"end":235,"start":6}],"match_end":235,"match_start":6},{"dbname":"PANTHER","id":"PTHR16062","interpro_description":"Remodelling complex subunit Rsc/polybromo","interpro_id":"IPR037382","interpro_name":"Rsc/polybromo","locations":[{"end":105,"start":21}],"match_end":105,"match_start":21,"name":"SWI/SNF-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3341124,"start_pos":3339455,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":311,"start":294}},{"range":{"end":343,"start":333}},{"range":{"end":415,"start":399}},{"range":{"end":435,"start":426}}],"name":"rsc4","ortholog_annotations":[{"gene_uniquename":"SJAG_00440","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30064","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00440","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.15","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00440","ortholog_taxonid":4932,"ortholog_uniquename":"YKR008W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00440","ortholog_taxonid":4932,"ortholog_uniquename":"YKR008W","reference_uniquename":"PMID:26896847"}],"product":"RSC complex bromodomain subunit Rsc4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003682"]}},"subset_termids":["MONDO:0004992","GO:0005829","GO:0006351","GO:0005634","GO:0006325","GO:0005694","MONDO:0005240"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003682":null,"GO:0005829":null,"GO:0016586":null,"GO:0045815":null,"MONDO:0007763":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00440.1"],"transcripts_by_uniquename":{"SJAG_00440.1":null},"uniprot_identifier":"B6JVM5","uniquename":"SJAG_00440"}


id: SJAG_00441
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106971],"is_not":false,"summary":null,"term":"GO:0006303"},{"annotations":[77126],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[64479],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[106967],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[64477],"is_not":false,"summary":null,"term":"GO:0033698"},{"annotations":[64478],"is_not":false,"summary":null,"term":"GO:0070210"}],"molecular_function":[{"annotations":[77125],"is_not":false,"summary":null,"term":"GO:0003714"}],"mondo":[{"annotations":[87991],"is_not":false,"summary":null,"term":"MONDO:0013256"}]},"dbxrefs":["InterPro:IPR003822","InterPro:IPR036600","EnsemblGenomes-Gn:SJAG_00441","EnsemblGenomes-Tr:EEB05427","InterPro:IPR039774","InterPro:IPR013194","UniProtKB/TrEMBL:B6JVM6","InterPro:IPR031693","GOA:B6JVM6"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":88,"start":1}},{"range":{"end":224,"start":164}},{"range":{"end":337,"start":314}},{"range":{"end":807,"start":760}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"}],"genes_by_uniquename":{"HGNC:19353":null,"HGNC:19354":null,"SJAG_00441":null,"SPBC1734.16c":null,"YOL004W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sin3 family co-repressor","id":"PF08295","interpro_description":"Histone deacetylase interacting domain","interpro_id":"IPR013194","interpro_name":"HDAC_interact_dom","locations":[{"end":549,"start":465}],"match_end":549,"match_start":465,"name":"Sin3_corepress"},{"dbname":"PFAM","description":"C-terminal domain of Sin3a protein","id":"PF16879","interpro_description":"Sin3, C-terminal","interpro_id":"IPR031693","interpro_name":"Sin3_C","locations":[{"end":1071,"start":854}],"match_end":1071,"match_start":854,"name":"Sin3a_C"},{"dbname":"PFAM","description":"Paired amphipathic helix repeat","id":"PF02671","interpro_description":"Paired amphipathic helix","interpro_id":"IPR003822","interpro_name":"PAH","locations":[{"end":156,"start":112},{"end":293,"start":250}],"match_end":293,"match_start":112,"name":"PAH"},{"dbname":"PROSITE_PROFILES","description":"PAH domain profile.","id":"PS51477","interpro_description":"Paired amphipathic helix","interpro_id":"IPR003822","interpro_name":"PAH","locations":[{"end":159,"start":89},{"end":296,"start":226}],"match_end":296,"match_start":89,"name":"PAH"},{"dbname":"SMART","id":"SM00761","interpro_description":"Histone deacetylase interacting domain","interpro_id":"IPR013194","interpro_name":"HDAC_interact_dom","locations":[{"end":562,"start":462}],"match_end":562,"match_start":462,"name":"hdac_interact2seq4b"},{"dbname":"FUNFAM","description":"Paired amphipathic helix protein Sin3","id":"G3DSA:1.20.1160.11:FF:000001","locations":[{"end":157,"start":95}],"match_end":157,"match_start":95},{"dbname":"FUNFAM","description":"Paired amphipathic helix SIN3-like protein","id":"G3DSA:1.20.1160.11:FF:000003","locations":[{"end":296,"start":225}],"match_end":296,"match_start":225},{"dbname":"SUPERFAMILY","id":"SSF47762","interpro_description":"Paired amphipathic helix superfamily","interpro_id":"IPR036600","interpro_name":"PAH_sf","locations":[{"end":157,"start":87},{"end":295,"start":223},{"end":441,"start":380}],"match_end":441,"match_start":87,"name":"PAH2 domain"},{"dbname":"GENE3D","id":"G3DSA:1.20.1160.11","interpro_description":"Paired amphipathic helix superfamily","interpro_id":"IPR036600","interpro_name":"PAH_sf","locations":[{"end":157,"start":95},{"end":297,"start":225},{"end":443,"start":373}],"match_end":443,"match_start":95,"name":"Paired amphipathic helix"},{"dbname":"PANTHER","id":"PTHR12346","interpro_description":"Transcriptional regulatory protein Sin3-like","interpro_id":"IPR039774","interpro_name":"Sin3-like","locations":[{"end":907,"start":86}],"match_end":907,"match_start":86,"name":"SIN3B-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":88,"start":1},{"end":224,"start":164},{"end":337,"start":314},{"end":807,"start":760}],"match_end":807,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":224,"start":187}],"match_end":224,"match_start":187,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":10,"start":1},{"end":88,"start":68},{"end":797,"start":787}],"match_end":797,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":35,"start":11}],"match_end":35,"match_start":11,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3339361,"start_pos":3335871,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":200,"start":181}},{"range":{"end":225,"start":205}},{"range":{"end":780,"start":769}},{"range":{"end":924,"start":913}}],"name":"pst3","ortholog_annotations":[{"gene_uniquename":"SJAG_00441","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19353","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00441","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19354","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00441","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00441","ortholog_taxonid":4932,"ortholog_uniquename":"YOL004W","reference_uniquename":"PMID:29761456"}],"product":"SIN3 family co-repressor, Clr6 and Rpd3L histone deacetylase complex subunit Pst3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003714"]}},"subset_termids":["GO:0005654","GO:0005634","GO:0003712","GO:0006355","GO:0005694","GO:0006281","GO:0060090","GO:0006325","GO:0006351","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0003714":null,"GO:0005829":null,"GO:0006303":null,"GO:0033698":null,"GO:0045815":null,"GO:0070210":null,"MONDO:0013256":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00441.1"],"transcripts_by_uniquename":{"SJAG_00441.1":null},"uniprot_identifier":"B6JVM6","uniquename":"SJAG_00441"}


id: SJAG_00442
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76016],"is_not":false,"summary":null,"term":"GO:0006031"},{"annotations":[106598],"is_not":false,"summary":null,"term":"GO:0140278"}],"cellular_component":[{"annotations":[76014],"is_not":false,"summary":null,"term":"GO:0071944"},{"annotations":[106596],"is_not":false,"summary":null,"term":"GO:0000935"}],"molecular_function":[{"annotations":[76015],"is_not":false,"summary":null,"term":"GO:0004100"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVM7","EnsemblGenomes-Gn:SJAG_00442","InterPro:IPR004835","InterPro:IPR004834","EnsemblGenomes-Tr:EEB05428","InterPro:IPR013616","GOA:B6JVM7"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":51,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"}],"genes_by_uniquename":{"SJAG_00442":null,"SPBC1709.01":null,"YBR038W":null,"YNL192W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Chitin synthase N-terminal","id":"PF08407","interpro_description":"Chitin synthase N-terminal","interpro_id":"IPR013616","interpro_name":"Chitin_synth_N","locations":[{"end":224,"start":153}],"match_end":224,"match_start":153,"name":"Chitin_synth_1N"},{"dbname":"PFAM","description":"Chitin synthase","id":"PF01644","interpro_description":"Fungal chitin synthase","interpro_id":"IPR004834","interpro_name":"Chitin_synth_fun","locations":[{"end":385,"start":227}],"match_end":385,"match_start":227,"name":"Chitin_synth_1"},{"dbname":"PANTHER","id":"PTHR22914","interpro_description":"Chitin synthase","interpro_id":"IPR004835","interpro_name":"Chitin_synth","locations":[{"end":877,"start":144}],"match_end":877,"match_start":144,"name":"CHITIN SYNTHASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":51,"start":1}],"match_end":51,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":51,"start":16}],"match_end":51,"match_start":16,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":14,"start":1}],"match_end":14,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3335029,"start_pos":3332308,"strand":"reverse"},"name":"chs2","ortholog_annotations":[{"gene_uniquename":"SJAG_00442","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1709.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00442","ortholog_taxonid":4932,"ortholog_uniquename":"YBR038W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00442","ortholog_taxonid":4932,"ortholog_uniquename":"YNL192W","reference_uniquename":"PMID:29761456"}],"product":"chitin synthase homolog Chs2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004100"]}},"subset_termids":["GO:0000935","GO:0016757","GO:0000281"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000935":null,"GO:0004100":null,"GO:0006031":null,"GO:0071944":null,"GO:0140278":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":593,"start":574}},{"assigned_by":"TMHMM","range":{"end":628,"start":606}},{"assigned_by":"TMHMM","range":{"end":665,"start":643}},{"assigned_by":"TMHMM","range":{"end":700,"start":678}},{"assigned_by":"TMHMM","range":{"end":727,"start":710}},{"assigned_by":"TMHMM","range":{"end":839,"start":822}},{"assigned_by":"TMHMM","range":{"end":876,"start":854}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00442.1"],"transcripts_by_uniquename":{"SJAG_00442.1":null},"uniprot_identifier":"B6JVM7","uniquename":"SJAG_00442"}


id: SJAG_00443
data:
  {"cv_annotations":{"biological_process":[{"annotations":[57387],"is_not":false,"summary":null,"term":"GO:0106074"},{"annotations":[106602],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[71833],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[57383],"is_not":false,"summary":null,"term":"GO:0002161"},{"annotations":[57380],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[71834],"is_not":false,"summary":null,"term":"GO:0004832"}],"mondo":[{"annotations":[86917],"is_not":false,"summary":null,"term":"MONDO:0060621"}]},"dbxrefs":["InterPro:IPR014729","EnsemblGenomes-Tr:EEB05429","GOA:B6JVM8","InterPro:IPR009080","UniProtKB/TrEMBL:B6JVM8","InterPro:IPR009008","InterPro:IPR013155","InterPro:IPR002300","InterPro:IPR001412","InterPro:IPR002303","EnsemblGenomes-Gn:SJAG_00443","InterPro:IPR033705"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":78,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"}],"genes_by_uniquename":{"HGNC:12651":null,"SJAG_00443":null,"SPBC1709.02c":null,"YGR094W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Anticodon-binding domain of tRNA ligase","id":"PF08264","interpro_description":"Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding","interpro_id":"IPR013155","interpro_name":"M/V/L/I-tRNA-synth_anticd-bd","locations":[{"end":924,"start":777}],"match_end":924,"match_start":777,"name":"Anticodon_1"},{"dbname":"PFAM","description":"tRNA synthetases class I (I, L, M and V)","id":"PF00133","interpro_description":"Aminoacyl-tRNA synthetase, class Ia","interpro_id":"IPR002300","interpro_name":"aa-tRNA-synth_Ia","locations":[{"end":732,"start":109}],"match_end":732,"match_start":109,"name":"tRNA-synt_1"},{"dbname":"CDD","description":"Anticodon_Ia_Val","id":"cd07962","interpro_description":"Valyl tRNA synthetase, anticodon-binding domain","interpro_id":"IPR033705","interpro_name":"Anticodon_Ia_Val","locations":[{"end":868,"start":731}],"match_end":868,"match_start":731,"name":"Anticodon_Ia_Val"},{"dbname":"CDD","description":"ValRS_core","id":"cd00817","locations":[{"end":731,"start":133}],"match_end":731,"match_start":133,"name":"ValRS_core"},{"dbname":"PROSITE_PATTERNS","description":"Aminoacyl-transfer RNA synthetases class-I signature.","id":"PS00178","interpro_description":"Aminoacyl-tRNA synthetase, class I, conserved site","interpro_id":"IPR001412","interpro_name":"aa-tRNA-synth_I_CS","locations":[{"end":153,"start":142}],"match_end":153,"match_start":142,"name":"AA_TRNA_LIGASE_I"},{"dbname":"PRINTS","description":"Valyl-tRNA synthetase signature","id":"PR00986","interpro_description":"Valine-tRNA ligase","interpro_id":"IPR002303","interpro_name":"Valyl-tRNA_ligase","locations":[{"end":146,"start":135},{"end":363,"start":346},{"end":475,"start":462},{"end":597,"start":576},{"end":625,"start":607}],"match_end":625,"match_start":135,"name":"TRNASYNTHVAL"},{"dbname":"FUNFAM","description":"Valine--tRNA ligase, mitochondrial","id":"G3DSA:3.90.740.10:FF:000005","locations":[{"end":449,"start":309}],"match_end":449,"match_start":309},{"dbname":"FUNFAM","description":"Valine--tRNA ligase, mitochondrial","id":"G3DSA:3.40.50.620:FF:000020","locations":[{"end":301,"start":98}],"match_end":301,"match_start":98},{"dbname":"FUNFAM","description":"Valine--tRNA ligase, mitochondrial","id":"G3DSA:3.40.50.620:FF:000078","locations":[{"end":656,"start":427}],"match_end":656,"match_start":427},{"dbname":"FUNFAM","description":"Valine--tRNA ligase, mitochondrial","id":"G3DSA:1.10.730.10:FF:000009","locations":[{"end":920,"start":686}],"match_end":920,"match_start":686},{"dbname":"SUPERFAMILY","id":"SSF52374","locations":[{"end":292,"start":95},{"end":672,"start":457},{"end":742,"start":710}],"match_end":742,"match_start":95,"name":"Nucleotidylyl transferase"},{"dbname":"SUPERFAMILY","id":"SSF50677","interpro_description":"Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain","interpro_id":"IPR009008","interpro_name":"Val/Leu/Ile-tRNA-synth_edit","locations":[{"end":457,"start":309}],"match_end":457,"match_start":309,"name":"ValRS/IleRS/LeuRS editing domain"},{"dbname":"SUPERFAMILY","id":"SSF47323","interpro_description":"Aminoacyl-tRNA synthetase, class Ia, anticodon-binding","interpro_id":"IPR009080","interpro_name":"tRNAsynth_Ia_anticodon-bd","locations":[{"end":972,"start":743}],"match_end":972,"match_start":743,"name":"Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases"},{"dbname":"GENE3D","id":"G3DSA:3.90.740.10","interpro_description":"Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain","interpro_id":"IPR009008","interpro_name":"Val/Leu/Ile-tRNA-synth_edit","locations":[{"end":356,"start":314}],"match_end":356,"match_start":314},{"dbname":"GENE3D","id":"G3DSA:1.10.730.10","locations":[{"end":920,"start":678}],"match_end":920,"match_start":678},{"dbname":"GENE3D","id":"G3DSA:3.40.50.620","interpro_description":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_id":"IPR014729","interpro_name":"Rossmann-like_a/b/a_fold","locations":[{"end":301,"start":97},{"end":656,"start":428}],"match_end":656,"match_start":97,"name":"HUPs"},{"dbname":"PANTHER","id":"PTHR11946","interpro_description":"Valine-tRNA ligase","interpro_id":"IPR002303","interpro_name":"Valyl-tRNA_ligase","locations":[{"end":979,"start":72}],"match_end":979,"match_start":72,"name":"VALYL-TRNA SYNTHETASES"},{"dbname":"HAMAP","description":"Valine--tRNA ligase [valS].","id":"MF_02004","interpro_description":"Valine-tRNA ligase","interpro_id":"IPR002303","interpro_name":"Valyl-tRNA_ligase","locations":[{"end":980,"start":92}],"match_end":980,"match_start":92,"name":"Val_tRNA_synth_type1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":78,"start":1}],"match_end":78,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":50,"start":41}],"match_end":50,"match_start":41,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":39,"start":25},{"end":72,"start":54}],"match_end":72,"match_start":25,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"valine--tRNA ligase","id":"TIGR00422","interpro_description":"Valine-tRNA ligase","interpro_id":"IPR002303","interpro_name":"Valyl-tRNA_ligase","locations":[{"end":960,"start":98}],"match_end":960,"match_start":98,"name":"valS"},{"dbname":"NCBIFAM","description":"valine--tRNA ligase","id":"NF004349","locations":[{"end":978,"start":98}],"match_end":978,"match_start":98,"name":"PRK05729.1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3332042,"start_pos":3328879,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":72,"start":36}},{"range":{"end":488,"start":482}},{"range":{"end":564,"start":555}}],"name":"vrs1","ortholog_annotations":[{"gene_uniquename":"SJAG_00443","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12651","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00443","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1709.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00443","ortholog_taxonid":4932,"ortholog_uniquename":"YGR094W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00443","ortholog_taxonid":4932,"ortholog_uniquename":"YGR094W","reference_uniquename":"PMID:26896847"}],"product":"cytoplasmic valine-tRNA ligase Vrs1/Vas1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004832","GO:0002161"]}},"subset_termids":["GO:0002181","MONDO:0700092","GO:0140101","GO:0006399","GO:0005829","GO:0016874","GO:0140098"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002161":null,"GO:0002181":null,"GO:0004832":null,"GO:0005524":null,"GO:0005829":null,"GO:0106074":null,"MONDO:0060621":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00443.1"],"transcripts_by_uniquename":{"SJAG_00443.1":null},"uniprot_identifier":"B6JVM8","uniquename":"SJAG_00443"}


id: SJAG_00444
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73373],"is_not":false,"summary":null,"term":"GO:0006207"},{"annotations":[59408],"is_not":false,"summary":null,"term":"GO:0044205"}],"cellular_component":[{"annotations":[73372],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[91293],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[73371],"is_not":false,"summary":null,"term":"GO:0004151"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVM9","InterPro:IPR004721","InterPro:IPR032466","InterPro:IPR002195","InterPro:IPR006680","EnsemblGenomes-Gn:SJAG_00444","GOA:B6JVM9","EnsemblGenomes-Tr:EEB05430"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"}],"genes_by_uniquename":{"SJAG_00444":null,"SPAC16.03c":null,"YLR420W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Amidohydrolase","id":"PF04909","interpro_description":"Amidohydrolase-related","interpro_id":"IPR006680","interpro_name":"Amidohydro-rel","locations":[{"end":174,"start":80}],"match_end":174,"match_start":80,"name":"Amidohydro_2"},{"dbname":"PROSITE_PATTERNS","description":"Dihydroorotase signature 1.","id":"PS00482","interpro_description":"Dihydroorotase, conserved site","interpro_id":"IPR002195","interpro_name":"Dihydroorotase_CS","locations":[{"end":19,"start":11}],"match_end":19,"match_start":11,"name":"DIHYDROOROTASE_1"},{"dbname":"PROSITE_PATTERNS","description":"Dihydroorotase signature 2.","id":"PS00483","interpro_description":"Dihydroorotase, conserved site","interpro_id":"IPR002195","interpro_name":"Dihydroorotase_CS","locations":[{"end":251,"start":240}],"match_end":251,"match_start":240,"name":"DIHYDROOROTASE_2"},{"dbname":"SUPERFAMILY","id":"SSF51556","interpro_description":"Metal-dependent hydrolase","interpro_id":"IPR032466","interpro_name":"Metal_Hydrolase","locations":[{"end":336,"start":1}],"match_end":336,"match_start":1,"name":"Metallo-dependent hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.140","locations":[{"end":338,"start":1}],"match_end":338,"match_start":1},{"dbname":"PANTHER","id":"PTHR43137","interpro_description":"Dihydroorotase homodimeric type","interpro_id":"IPR004721","interpro_name":"DHOdimr","locations":[{"end":337,"start":2}],"match_end":337,"match_start":2,"name":"DIHYDROOROTASE"},{"dbname":"PIRSF","id":"PIRSF001237","interpro_description":"Dihydroorotase homodimeric type","interpro_id":"IPR004721","interpro_name":"DHOdimr","locations":[{"end":339,"start":1}],"match_end":339,"match_start":1,"name":"Dihydroorotase"},{"dbname":"HAMAP","description":"Dihydroorotase [pyrC].","id":"MF_00219","interpro_description":"Dihydroorotase homodimeric type","interpro_id":"IPR004721","interpro_name":"DHOdimr","locations":[{"end":337,"start":2}],"match_end":337,"match_start":2,"name":"PyrC_classII"},{"dbname":"NCBIFAM","description":"dihydroorotase, homodimeric type","id":"TIGR00856","interpro_description":"Dihydroorotase homodimeric type","interpro_id":"IPR004721","interpro_name":"DHOdimr","locations":[{"end":336,"start":5}],"match_end":336,"match_start":5,"name":"pyrC_dimer"}],"location":{"chromosome_name":"supercont5.1","end_pos":3328439,"start_pos":3327350,"strand":"reverse"},"name":"ura2","ortholog_annotations":[{"gene_uniquename":"SJAG_00444","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00444","ortholog_taxonid":4932,"ortholog_uniquename":"YLR420W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00444","ortholog_taxonid":4932,"ortholog_uniquename":"YLR420W","reference_uniquename":"PMID:26896847"}],"product":"dihydroorotase Ura2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004151"]}},"subset_termids":["GO:0016810","GO:0005634","GO:0055086"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004151":null,"GO:0005634":null,"GO:0005737":null,"GO:0006207":null,"GO:0044205":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00444.1"],"transcripts_by_uniquename":{"SJAG_00444.1":null},"uniprot_identifier":"B6JVM9","uniquename":"SJAG_00444"}


id: SJAG_00445
data:
  {"cv_annotations":{"biological_process":[{"annotations":[69046],"is_not":false,"summary":null,"term":"GO:0055085"}],"cellular_component":[{"annotations":[120355],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[120357],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[120359],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[80418],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[80419],"is_not":false,"summary":null,"term":"GO:0022857"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05431","InterPro:IPR020846","GOA:B6JVN0","InterPro:IPR036259","UniProtKB/TrEMBL:B6JVN0","EnsemblGenomes-Gn:SJAG_00445"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"}],"genes_by_uniquename":{"SJAG_00445":null,"SPCC757.11c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Major Facilitator Superfamily","id":"PF07690","interpro_description":"Major facilitator superfamily","interpro_id":"IPR011701","interpro_name":"MFS","locations":[{"end":433,"start":72}],"match_end":433,"match_start":72,"name":"MFS_1"},{"dbname":"PROSITE_PROFILES","description":"Major facilitator superfamily (MFS) profile.","id":"PS50850","interpro_description":"Major facilitator superfamily domain","interpro_id":"IPR020846","interpro_name":"MFS_dom","locations":[{"end":476,"start":67}],"match_end":476,"match_start":67,"name":"MFS"},{"dbname":"SUPERFAMILY","id":"SSF103473","interpro_description":"MFS transporter superfamily","interpro_id":"IPR036259","interpro_name":"MFS_trans_sf","locations":[{"end":478,"start":64}],"match_end":478,"match_start":64,"name":"MFS general substrate transporter"},{"dbname":"GENE3D","id":"G3DSA:1.20.1250.20","interpro_description":"MFS transporter superfamily","interpro_id":"IPR036259","interpro_name":"MFS_trans_sf","locations":[{"end":472,"start":65}],"match_end":472,"match_start":65,"name":"MFS general substrate transporter like domains"},{"dbname":"PANTHER","id":"PTHR23510","interpro_description":"Major Facilitator Superfamily Domain-Containing Protein","interpro_id":"IPR051068","interpro_name":"MFS_Domain-Containing_Protein","locations":[{"end":476,"start":46}],"match_end":476,"match_start":46,"name":"INNER MEMBRANE TRANSPORT PROTEIN YAJR"}],"location":{"chromosome_name":"supercont5.1","end_pos":3327165,"start_pos":3325723,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":111,"start":96}},{"range":{"end":378,"start":358}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00445","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC757.11c","reference_uniquename":"PMID:26896847"}],"product":"MFS transporter superfamily","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:26896847":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0022857"]}},"subset_termids":["GO:0022857","GO:0005794","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null,"GO:0016020":null,"GO:0022857":null,"GO:0032153":null,"GO:0051286":null,"GO:0055085":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":90,"start":68}},{"assigned_by":"TMHMM","range":{"end":127,"start":105}},{"assigned_by":"TMHMM","range":{"end":154,"start":132}},{"assigned_by":"TMHMM","range":{"end":180,"start":158}},{"assigned_by":"TMHMM","range":{"end":221,"start":199}},{"assigned_by":"TMHMM","range":{"end":258,"start":236}},{"assigned_by":"TMHMM","range":{"end":315,"start":293}},{"assigned_by":"TMHMM","range":{"end":352,"start":330}},{"assigned_by":"TMHMM","range":{"end":378,"start":359}},{"assigned_by":"TMHMM","range":{"end":410,"start":388}},{"assigned_by":"TMHMM","range":{"end":445,"start":423}},{"assigned_by":"TMHMM","range":{"end":472,"start":450}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00445.1"],"transcripts_by_uniquename":{"SJAG_00445.1":null},"uniprot_identifier":"B6JVN0","uniquename":"SJAG_00445"}


id: SJAG_00446
data:
  {"coiled_coil_coords":[{"range":{"end":193,"start":150}}],"cv_annotations":{"biological_process":[{"annotations":[81174],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[81173],"is_not":false,"summary":null,"term":"GO:0071013"},{"annotations":[111198],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[111199],"is_not":false,"summary":null,"term":"GO:0000974"}],"molecular_function":[{"annotations":[81175],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00446","InterPro:IPR006973","UniProtKB/TrEMBL:B6JVN1","EnsemblGenomes-Tr:EEB05432","GOA:B6JVN1"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":21,"start":1}},{"range":{"end":201,"start":105}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"}],"genes_by_uniquename":{"HGNC:26939":null,"SJAG_00446":null,"SPBC337.06c":null,"YDR163W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cwf15/Cwc15 cell cycle control protein","id":"PF04889","interpro_description":"Pre-mRNA-splicing factor Cwf15/Cwc15","interpro_id":"IPR006973","interpro_name":"Cwf_Cwc_15","locations":[{"end":255,"start":1}],"match_end":255,"match_start":1,"name":"Cwf_Cwc_15"},{"dbname":"PANTHER","id":"PTHR12718","interpro_description":"Pre-mRNA-splicing factor Cwf15/Cwc15","interpro_id":"IPR006973","interpro_name":"Cwf_Cwc_15","locations":[{"end":255,"start":1}],"match_end":255,"match_start":1,"name":"CELL CYCLE CONTROL PROTEIN CWF15"},{"dbname":"COILS","id":"Coil","locations":[{"end":193,"start":150}],"match_end":193,"match_start":150,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":21,"start":1},{"end":201,"start":105}],"match_end":201,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":124,"start":112},{"end":158,"start":142}],"match_end":158,"match_start":112,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":177,"start":159},{"end":194,"start":185}],"match_end":194,"match_start":159,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3324798,"start_pos":3323982,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":126,"start":108}},{"range":{"end":192,"start":137}}],"name":"cwf15","ortholog_annotations":[{"gene_uniquename":"SJAG_00446","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26939","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00446","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00446","ortholog_taxonid":4932,"ortholog_uniquename":"YDR163W","reference_uniquename":"PMID:29761456"}],"product":"Prp19 complex subunit Cwf15","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000974":null,"GO:0003723":null,"GO:0045292":null,"GO:0071013":null,"GO:0071014":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00446.1"],"transcripts_by_uniquename":{"SJAG_00446.1":null},"uniprot_identifier":"B6JVN1","uniquename":"SJAG_00446"}


id: SJAG_00447
data:
  {"coiled_coil_coords":[{"range":{"end":405,"start":385}}],"cv_annotations":{"biological_process":[{"annotations":[75386],"is_not":false,"summary":null,"term":"GO:0006457"}],"cellular_component":[{"annotations":[75385],"is_not":false,"summary":null,"term":"GO:0005832"},{"annotations":[111190],"is_not":false,"summary":null,"term":"GO:0005856"}],"molecular_function":[{"annotations":[62040],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[62039],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[62038],"is_not":false,"summary":null,"term":"GO:0140662"},{"annotations":[75387],"is_not":false,"summary":null,"term":"GO:0051082"}]},"dbxrefs":["InterPro:IPR027409","InterPro:IPR027410","EnsemblGenomes-Gn:SJAG_00447","EnsemblGenomes-Tr:EEB05433","InterPro:IPR012721","InterPro:IPR027413","GOA:B6JVN2","UniProtKB/TrEMBL:B6JVN2","InterPro:IPR017998","InterPro:IPR002423","InterPro:IPR002194"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"}],"genes_by_uniquename":{"HGNC:15553":null,"SJAG_00447":null,"SPBC337.05c":null,"YJL008C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"TCP-1/cpn60 chaperonin family","id":"PF00118","interpro_description":"Chaperonin Cpn60/GroEL/TCP-1 family","interpro_id":"IPR002423","interpro_name":"Cpn60/GroEL/TCP-1","locations":[{"end":530,"start":38}],"match_end":530,"match_start":38,"name":"Cpn60_TCP1"},{"dbname":"CDD","description":"TCP1_theta","id":"cd03341","interpro_description":"T-complex protein 1, theta subunit","interpro_id":"IPR012721","interpro_name":"Chap_CCT_theta","locations":[{"end":527,"start":19}],"match_end":527,"match_start":19,"name":"TCP1_theta"},{"dbname":"PROSITE_PATTERNS","description":"Chaperonins TCP-1 signature 2.","id":"PS00751","interpro_description":"Chaperonin TCP-1, conserved site","interpro_id":"IPR002194","interpro_name":"Chaperonin_TCP-1_CS","locations":[{"end":80,"start":64}],"match_end":80,"match_start":64,"name":"TCP1_2"},{"dbname":"PROSITE_PATTERNS","description":"Chaperonins TCP-1 signature 3.","id":"PS00995","interpro_description":"Chaperonin TCP-1, conserved site","interpro_id":"IPR002194","interpro_name":"Chaperonin_TCP-1_CS","locations":[{"end":100,"start":92}],"match_end":100,"match_start":92,"name":"TCP1_3"},{"dbname":"PROSITE_PATTERNS","description":"Chaperonins TCP-1 signature 1.","id":"PS00750","interpro_description":"Chaperonin TCP-1, conserved site","interpro_id":"IPR002194","interpro_name":"Chaperonin_TCP-1_CS","locations":[{"end":55,"start":43}],"match_end":55,"match_start":43,"name":"TCP1_1"},{"dbname":"PRINTS","description":"Tailless complex polypeptide 1 (chaperone) signature","id":"PR00304","interpro_description":"Chaperone tailless complex polypeptide 1 (TCP-1)","interpro_id":"IPR017998","interpro_name":"Chaperone_TCP-1","locations":[{"end":56,"start":40},{"end":80,"start":62},{"end":111,"start":92},{"end":396,"start":374},{"end":420,"start":408}],"match_end":420,"match_start":40,"name":"TCOMPLEXTCP1"},{"dbname":"FUNFAM","description":"T-complex protein 1 subunit theta","id":"G3DSA:3.50.7.10:FF:000008","locations":[{"end":372,"start":219}],"match_end":372,"match_start":219},{"dbname":"SUPERFAMILY","id":"SSF54849","interpro_description":"TCP-1-like chaperonin intermediate domain superfamily","interpro_id":"IPR027410","interpro_name":"TCP-1-like_intermed_sf","locations":[{"end":220,"start":157},{"end":407,"start":372}],"match_end":407,"match_start":157,"name":"GroEL-intermediate domain like"},{"dbname":"SUPERFAMILY","id":"SSF48592","interpro_description":"GroEL-like equatorial domain superfamily","interpro_id":"IPR027413","interpro_name":"GROEL-like_equatorial_sf","locations":[{"end":149,"start":24},{"end":530,"start":406}],"match_end":530,"match_start":24,"name":"GroEL equatorial domain-like"},{"dbname":"SUPERFAMILY","id":"SSF52029","interpro_description":"GroEL-like apical domain superfamily","interpro_id":"IPR027409","interpro_name":"GroEL-like_apical_dom_sf","locations":[{"end":379,"start":215}],"match_end":379,"match_start":215,"name":"GroEL apical domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.50.7.10","interpro_description":"GroEL-like apical domain superfamily","interpro_id":"IPR027409","interpro_name":"GroEL-like_apical_dom_sf","locations":[{"end":370,"start":219}],"match_end":370,"match_start":219,"name":"GroEL"},{"dbname":"GENE3D","id":"G3DSA:3.30.260.10","interpro_description":"TCP-1-like chaperonin intermediate domain superfamily","interpro_id":"IPR027410","interpro_name":"TCP-1-like_intermed_sf","locations":[{"end":218,"start":148},{"end":406,"start":371}],"match_end":406,"match_start":148},{"dbname":"GENE3D","id":"G3DSA:1.10.560.10","interpro_description":"GroEL-like equatorial domain superfamily","interpro_id":"IPR027413","interpro_name":"GROEL-like_equatorial_sf","locations":[{"end":147,"start":35},{"end":526,"start":407}],"match_end":526,"match_start":35},{"dbname":"PANTHER","id":"PTHR11353","interpro_description":"Chaperone tailless complex polypeptide 1 (TCP-1)","interpro_id":"IPR017998","interpro_name":"Chaperone_TCP-1","locations":[{"end":529,"start":21}],"match_end":529,"match_start":21,"name":"CHAPERONIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":405,"start":385}],"match_end":405,"match_start":385,"name":"Coil"},{"dbname":"NCBIFAM","description":"T-complex protein 1 subunit theta","id":"TIGR02346","interpro_description":"T-complex protein 1, theta subunit","interpro_id":"IPR012721","interpro_name":"Chap_CCT_theta","locations":[{"end":537,"start":11}],"match_end":537,"match_start":11,"name":"chap_CCT_theta"}],"location":{"chromosome_name":"supercont5.1","end_pos":3323594,"start_pos":3321656,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":121,"start":107}},{"range":{"end":240,"start":230}},{"range":{"end":541,"start":527}}],"name":"cct8","ortholog_annotations":[{"gene_uniquename":"SJAG_00447","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15553","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00447","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00447","ortholog_taxonid":4932,"ortholog_uniquename":"YJL008C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00447","ortholog_taxonid":4932,"ortholog_uniquename":"YJL008C","reference_uniquename":"PMID:26896847"}],"product":"chaperonin-containing T-complex theta subunit Cct8","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0051082"],"not-binding":["GO:0140662","GO:0016887"]}},"subset_termids":["GO:0051604","GO:0006457","GO:0051082","GO:0016887","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005832":null,"GO:0005856":null,"GO:0006457":null,"GO:0016887":null,"GO:0051082":null,"GO:0140662":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00447.1"],"transcripts_by_uniquename":{"SJAG_00447.1":null},"uniprot_identifier":"B6JVN2","uniquename":"SJAG_00447"}


id: SJAG_00448
data:
  {"cv_annotations":{"biological_process":[{"annotations":[66379],"is_not":false,"summary":null,"term":"GO:0031124"}],"cellular_component":[{"annotations":[111184],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[111185],"is_not":false,"summary":null,"term":"GO:0033620"}],"molecular_function":[{"annotations":[111188],"is_not":false,"summary":null,"term":"GO:0140693"},{"annotations":[66380],"is_not":false,"summary":null,"term":"GO:0099122"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00448","GOA:B6JVN3","EnsemblGenomes-Tr:EEB05434","InterPro:IPR006569","InterPro:IPR008942","UniProtKB/TrEMBL:B6JVN3","InterPro:IPR006903"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":317,"start":278}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"}],"genes_by_uniquename":{"HGNC:16209":null,"HGNC:25560":null,"SJAG_00448":null,"SPBC337.03":null,"YDR289C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CID domain","id":"PF04818","interpro_description":"CID domain","interpro_id":"IPR006569","interpro_name":"CID_dom","locations":[{"end":125,"start":7}],"match_end":125,"match_start":7,"name":"CID"},{"dbname":"CDD","description":"CID_Rtt103","id":"cd17003","interpro_description":"Regulator of Ty1 transposition protein 103-like, CID domain","interpro_id":"IPR047883","interpro_name":"Rtt103-like_CID","locations":[{"end":129,"start":5}],"match_end":129,"match_start":5,"name":"CID_Rtt103"},{"dbname":"PROSITE_PROFILES","description":"CID domain profile.","id":"PS51391","interpro_description":"CID domain","interpro_id":"IPR006569","interpro_name":"CID_dom","locations":[{"end":133,"start":1}],"match_end":133,"match_start":1,"name":"CID"},{"dbname":"SMART","id":"SM00582","interpro_description":"CID domain","interpro_id":"IPR006569","interpro_name":"CID_dom","locations":[{"end":130,"start":7}],"match_end":130,"match_start":7,"name":"558neu5"},{"dbname":"SUPERFAMILY","id":"SSF48464","interpro_description":"ENTH/VHS","interpro_id":"IPR008942","interpro_name":"ENTH_VHS","locations":[{"end":130,"start":9}],"match_end":130,"match_start":9,"name":"ENTH/VHS domain"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.90","interpro_description":"ENTH/VHS","interpro_id":"IPR008942","interpro_name":"ENTH_VHS","locations":[{"end":136,"start":1}],"match_end":136,"match_start":1},{"dbname":"PANTHER","id":"PTHR12460","locations":[{"end":306,"start":5}],"match_end":306,"match_start":5,"name":"CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":317,"start":278}],"match_end":317,"match_start":278,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":293,"start":279}],"match_end":293,"match_start":279,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3321419,"start_pos":3319968,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":61,"start":55}},{"range":{"end":98,"start":79}},{"range":{"end":277,"start":267}}],"name":"rhn1","ortholog_annotations":[{"gene_uniquename":"SJAG_00448","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16209","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00448","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25560","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00448","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00448","ortholog_taxonid":4932,"ortholog_uniquename":"YDR289C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00448","ortholog_taxonid":4932,"ortholog_uniquename":"YDR289C","reference_uniquename":"PMID:26896847"}],"product":"RNA polymerase II 3' end processing-associated factor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0099122"],"not-binding":["GO:0140693"]}},"subset_termids":["GO:0060090","GO:0005829","GO:0005634","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0031124":null,"GO:0033620":null,"GO:0099122":null,"GO:0140693":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00448.1"],"transcripts_by_uniquename":{"SJAG_00448.1":null},"uniprot_identifier":"B6JVN3","uniquename":"SJAG_00448"}


id: SJAG_00449
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109440],"is_not":false,"summary":null,"term":"GO:0033617"}],"cellular_component":[{"annotations":[109438],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[62070],"is_not":false,"summary":null,"term":"GO:0005758"}],"molecular_function":[{"annotations":[62069],"is_not":false,"summary":null,"term":"GO:0016531"},{"annotations":[62068],"is_not":false,"summary":null,"term":"GO:0005507"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05435","InterPro:IPR007745","EnsemblGenomes-Gn:SJAG_00449","GOA:B6JVN4","UniProtKB/TrEMBL:B6JVN4","InterPro:IPR009069"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":25,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"}],"genes_by_uniquename":{"HGNC:2264":null,"SJAG_00449":null,"SPBC26H8.14c":null,"YLL009C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cytochrome C oxidase copper chaperone (COX17)","id":"PF05051","interpro_description":"Cytochrome c oxidase copper chaperone","interpro_id":"IPR007745","interpro_name":"Cyt_c_oxidase_Cu-chaperone","locations":[{"end":67,"start":20}],"match_end":67,"match_start":20,"name":"COX17"},{"dbname":"PROSITE_PROFILES","description":"Coiled coil-helix-coiled coil-helix (CHCH) domain profile.","id":"PS51808","locations":[{"end":67,"start":25}],"match_end":67,"match_start":25,"name":"CHCH"},{"dbname":"FUNFAM","description":"Cytochrome c oxidase assembly protein subunit 17","id":"G3DSA:1.10.287.1130:FF:000005","locations":[{"end":67,"start":1}],"match_end":67,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF47072","interpro_description":"Cysteine alpha-hairpin motif superfamily","interpro_id":"IPR009069","interpro_name":"Cys_alpha_HP_mot_SF","locations":[{"end":67,"start":10}],"match_end":67,"match_start":10,"name":"Cysteine alpha-hairpin motif"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.1130","locations":[{"end":67,"start":5}],"match_end":67,"match_start":5,"name":"CytochromE C oxidase copper chaperone"},{"dbname":"PANTHER","id":"PTHR16719","interpro_description":"Cytochrome c oxidase copper chaperone","interpro_id":"IPR007745","interpro_name":"Cyt_c_oxidase_Cu-chaperone","locations":[{"end":67,"start":10}],"match_end":67,"match_start":10,"name":"CYTOCHROME C OXIDASE COPPER CHAPERONE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":25,"start":1}],"match_end":25,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3319734,"start_pos":3319399,"strand":"reverse"},"name":"cox17","ortholog_annotations":[{"gene_uniquename":"SJAG_00449","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2264","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00449","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC26H8.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00449","ortholog_taxonid":4932,"ortholog_uniquename":"YLL009C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00449","ortholog_taxonid":4932,"ortholog_uniquename":"YLL009C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial copper chaperone for cytochrome c oxidase Cox17","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005507"],"not-binding":["GO:0016531"]}},"subset_termids":["GO:0005829","GO:0005739","GO:0007005","GO:0140104","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005507":null,"GO:0005758":null,"GO:0005829":null,"GO:0016531":null,"GO:0033617":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00449.1"],"transcripts_by_uniquename":{"SJAG_00449.1":null},"uniprot_identifier":"B6JVN4","uniquename":"SJAG_00449"}


id: SJAG_00450
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[80310],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[80309],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[68951],"is_not":false,"summary":null,"term":"GO:0008418"},{"annotations":[80308],"is_not":false,"summary":null,"term":"GO:0070773"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVN5","EnsemblGenomes-Gn:SJAG_00450","InterPro:IPR023128","InterPro:IPR037132","GOA:B6JVN5","EnsemblGenomes-Tr:EEB05436","InterPro:IPR039733"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"}],"genes_by_uniquename":{"SJAG_00450":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"N-terminal glutamine amidase","id":"PF09764","interpro_description":"Protein N-terminal glutamine amidohydrolase, alpha beta roll","interpro_id":"IPR023128","interpro_name":"Prot_N_Gln_amidohydro_ab_roll","locations":[{"end":205,"start":24}],"match_end":205,"match_start":24,"name":"Nt_Gln_amidase"},{"dbname":"GENE3D","id":"G3DSA:3.10.620.10","interpro_description":"Protein N-terminal glutamine amidohydrolase, alpha beta roll superfamily","interpro_id":"IPR037132","interpro_name":"N_Gln_amidohydro_ab_roll_sf","locations":[{"end":210,"start":4}],"match_end":210,"match_start":4},{"dbname":"PANTHER","id":"PTHR13035","interpro_description":"Protein N-terminal glutamine amidohydrolase","interpro_id":"IPR039733","interpro_name":"NTAQ1","locations":[{"end":206,"start":5}],"match_end":206,"match_start":5,"name":"PROTEIN N-TERMINAL GLUTAMINE AMIDOHYDROLASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":3318785,"start_pos":3317747,"strand":"forward"},"product":"protein N-terminal glutamine amidohydrolase, alpha beta roll superfamily","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0070773","GO:0008418"]}},"subset_termids":["GO:0016810","GO:0005634","GO:0140096","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008418":null,"GO:0070773":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00450.1"],"transcripts_by_uniquename":{"SJAG_00450.1":null},"uniprot_identifier":"B6JVN5","uniquename":"SJAG_00450"}


id: SJAG_00451
data:
  {"cv_annotations":{"molecular_function":[{"annotations":[76174],"is_not":false,"summary":null,"term":"GO:0004181"},{"annotations":[63143],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR000834","EnsemblGenomes-Tr:EEB05437","UniProtKB/TrEMBL:B6JVN6","GOA:B6JVN6","EnsemblGenomes-Gn:SJAG_00451"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":168,"start":130}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"}],"genes_by_uniquename":{"HGNC:15722":null,"HGNC:15740":null,"HGNC:2296":null,"HGNC:2297":null,"HGNC:2298":null,"SJAG_00451":null,"SPBC337.07c":null,"YHR132C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Zinc carboxypeptidase","id":"PF00246","interpro_description":"Peptidase M14, carboxypeptidase A","interpro_id":"IPR000834","interpro_name":"Peptidase_M14","locations":[{"end":484,"start":190}],"match_end":484,"match_start":190,"name":"Peptidase_M14"},{"dbname":"CDD","description":"M14_CP_A-B_like","id":"cd03860","locations":[{"end":494,"start":183}],"match_end":494,"match_start":183,"name":"M14_CP_A-B_like"},{"dbname":"PROSITE_PATTERNS","description":"Zinc carboxypeptidases, zinc-binding region 1 signature.","id":"PS00132","interpro_description":"Peptidase M14, carboxypeptidase A","interpro_id":"IPR000834","interpro_name":"Peptidase_M14","locations":[{"end":260,"start":238}],"match_end":260,"match_start":238,"name":"CARBOXYPEPT_ZN_1"},{"dbname":"SMART","id":"SM00631","interpro_description":"Peptidase M14, carboxypeptidase A","interpro_id":"IPR000834","interpro_name":"Peptidase_M14","locations":[{"end":482,"start":183}],"match_end":482,"match_start":183,"name":"zn_carb"},{"dbname":"PRINTS","description":"Carboxypeptidase A metalloprotease (M14) family signature","id":"PR00765","interpro_description":"Peptidase M14, carboxypeptidase A","interpro_id":"IPR000834","interpro_name":"Peptidase_M14","locations":[{"end":221,"start":209},{"end":252,"start":238},{"end":326,"start":318},{"end":389,"start":376}],"match_end":389,"match_start":209,"name":"CRBOXYPTASEA"},{"dbname":"FUNFAM","description":"Carboxypeptidase B2","id":"G3DSA:3.40.630.10:FF:000084","locations":[{"end":493,"start":175}],"match_end":493,"match_start":175},{"dbname":"SUPERFAMILY","id":"SSF53187","locations":[{"end":494,"start":179}],"match_end":494,"match_start":179,"name":"Zn-dependent exopeptidases"},{"dbname":"SUPERFAMILY","id":"SSF54897","locations":[{"end":127,"start":58}],"match_end":127,"match_start":58,"name":"Protease propeptides/inhibitors"},{"dbname":"GENE3D","id":"G3DSA:3.40.630.10","locations":[{"end":496,"start":176}],"match_end":496,"match_start":176,"name":"Zn peptidases"},{"dbname":"PANTHER","id":"PTHR11705","locations":[{"end":491,"start":77}],"match_end":491,"match_start":77,"name":"PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":168,"start":130}],"match_end":168,"match_start":130,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":156,"start":131}],"match_end":156,"match_start":131,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3316953,"start_pos":3315238,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":150,"start":132}},{"range":{"end":166,"start":153}},{"range":{"end":364,"start":347}}],"name":"ecm14","ortholog_annotations":[{"gene_uniquename":"SJAG_00451","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15722","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15740","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2296","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2297","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2298","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":4932,"ortholog_uniquename":"YHR132C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":4932,"ortholog_uniquename":"YHR132C","reference_uniquename":"PMID:26896847"}],"product":"pseudopeptidase Ecm14","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0004181"]}},"subset_termids":["GO:0140096","GO:0008233"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004181":null,"GO:0008270":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00451.1"],"transcripts_by_uniquename":{"SJAG_00451.1":null},"uniprot_identifier":"B6JVN6","uniquename":"SJAG_00451"}


id: SJAG_00452
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111207],"is_not":false,"summary":null,"term":"GO:0051321"},{"annotations":[111208],"is_not":false,"summary":null,"term":"GO:0033621"},{"annotations":[111209],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[72171],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[72170],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[111210],"is_not":false,"summary":null,"term":"GO:0004857"},{"annotations":[72174],"is_not":false,"summary":null,"term":"GO:0031386"},{"annotations":[72172],"is_not":false,"summary":null,"term":"GO:0031625"}]},"dbxrefs":["InterPro:IPR019956","GOA:B6JVN7","UniProtKB/TrEMBL:B6JVN7","InterPro:IPR019954","EnsemblGenomes-Gn:SJAG_00452","InterPro:IPR000626","EnsemblGenomes-Tr:EEB05438","InterPro:IPR029071"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"}],"genes_by_uniquename":{"HGNC:12463":null,"HGNC:12468":null,"SJAG_00452":null,"SPBC337.08c":null,"YLL039C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ubiquitin family","id":"PF00240","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":74,"start":3},{"end":150,"start":79},{"end":226,"start":155},{"end":302,"start":231},{"end":378,"start":307}],"match_end":378,"match_start":3,"name":"ubiquitin"},{"dbname":"CDD","description":"Ubl_ubiquitin","id":"cd01803","locations":[{"end":380,"start":1}],"match_end":380,"match_start":1,"name":"Ubl_ubiquitin"},{"dbname":"PROSITE_PATTERNS","description":"Ubiquitin domain signature.","id":"PS00299","interpro_description":"Ubiquitin conserved site","interpro_id":"IPR019954","interpro_name":"Ubiquitin_CS","locations":[{"end":52,"start":27},{"end":128,"start":103},{"end":204,"start":179},{"end":280,"start":255},{"end":356,"start":331}],"match_end":356,"match_start":27,"name":"UBIQUITIN_1"},{"dbname":"PROSITE_PROFILES","description":"Ubiquitin domain profile.","id":"PS50053","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":380,"start":1}],"match_end":380,"match_start":1,"name":"UBIQUITIN_2"},{"dbname":"SMART","id":"SM00213","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":72,"start":1},{"end":148,"start":77},{"end":224,"start":153},{"end":300,"start":229},{"end":376,"start":305}],"match_end":376,"match_start":1,"name":"ubq_7"},{"dbname":"PRINTS","description":"Ubiquitin signature","id":"PR00348","interpro_description":"Ubiquitin domain","interpro_id":"IPR019956","interpro_name":"Ubiquitin_dom","locations":[{"end":74,"start":11}],"match_end":74,"match_start":11,"name":"UBIQUITIN"},{"dbname":"FUNFAM","description":"Polyubiquitin Ubiquitin","id":"G3DSA:3.10.20.90:FF:000004","locations":[{"end":380,"start":1}],"match_end":380,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF54236","interpro_description":"Ubiquitin-like domain superfamily","interpro_id":"IPR029071","interpro_name":"Ubiquitin-like_domsf","locations":[{"end":380,"start":1}],"match_end":380,"match_start":1,"name":"Ubiquitin-like"},{"dbname":"GENE3D","id":"G3DSA:3.10.20.90","locations":[{"end":382,"start":1}],"match_end":382,"match_start":1},{"dbname":"PANTHER","id":"PTHR10666","interpro_description":"Ubiquitin and ubiquitin-like","interpro_id":"IPR050158","interpro_name":"Ubiquitin_ubiquitin-like","locations":[{"end":230,"start":153}],"match_end":230,"match_start":153,"name":"UBIQUITIN"}],"location":{"chromosome_name":"supercont5.1","end_pos":3314790,"start_pos":3313642,"strand":"forward"},"name":"ubi4","ortholog_annotations":[{"gene_uniquename":"SJAG_00452","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12463","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00452","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12468","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00452","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00452","ortholog_taxonid":4932,"ortholog_uniquename":"YLL039C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00452","ortholog_taxonid":4932,"ortholog_uniquename":"YLL039C","reference_uniquename":"PMID:26896847"}],"product":"protein modifier, ubiquitin","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0031625"],"not-binding":["GO:0004857","GO:0031386"]}},"subset_termids":["GO:0030163","GO:0005634","GO:0030234","GO:0031386","GO:0098772","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004857":null,"GO:0005634":null,"GO:0005737":null,"GO:0031386":null,"GO:0031625":null,"GO:0033621":null,"GO:0043161":null,"GO:0051321":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00452.1"],"transcripts_by_uniquename":{"SJAG_00452.1":null},"uniprot_identifier":"B6JVN7","uniquename":"SJAG_00452"}


id: SJAG_00453
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111214],"is_not":false,"summary":null,"term":"GO:0006696"}],"cellular_component":[{"annotations":[111213],"is_not":false,"summary":null,"term":"GO:0005789"}],"molecular_function":[{"annotations":[111215],"is_not":false,"summary":null,"term":"GO:0043495"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00453","EnsemblGenomes-Tr:EEB05439","InterPro:IPR005352","UniProtKB/TrEMBL:B6JVN8","GOA:B6JVN8"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"}],"genes_by_uniquename":{"HGNC:1187":null,"SJAG_00453":null,"SPBC337.09":null,"YER044C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Erg28 like protein","id":"PF03694","interpro_description":"Erg28","interpro_id":"IPR005352","interpro_name":"Erg28","locations":[{"end":122,"start":13}],"match_end":122,"match_start":13,"name":"Erg28"},{"dbname":"PANTHER","id":"PTHR15451","interpro_description":"Erg28","interpro_id":"IPR005352","interpro_name":"Erg28","locations":[{"end":127,"start":11}],"match_end":127,"match_start":11,"name":"ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3312648,"start_pos":3312232,"strand":"reverse"},"name":"erg28","ortholog_annotations":[{"gene_uniquename":"SJAG_00453","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1187","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00453","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00453","ortholog_taxonid":4932,"ortholog_uniquename":"YER044C","reference_uniquename":"PMID:29761456"}],"product":"ER membrane adaptor Erg28 protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0043495"]}},"subset_termids":["GO:0005783","GO:0005789","GO:0060090","GO:0006629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005789":null,"GO:0006696":null,"GO:0043495":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":34,"start":12}},{"assigned_by":"TMHMM","range":{"end":100,"start":78}},{"assigned_by":"TMHMM","range":{"end":126,"start":107}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00453.1"],"transcripts_by_uniquename":{"SJAG_00453.1":null},"uniprot_identifier":"B6JVN8","uniquename":"SJAG_00453"}


id: SJAG_00454
data:
  {"coiled_coil_coords":[{"range":{"end":93,"start":42}}],"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00454","EnsemblGenomes-Tr:EEB05440","UniProtKB/TrEMBL:B6JVN9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":33,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"}],"genes_by_uniquename":{"SJAG_00454":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":93,"start":42}],"match_end":93,"match_start":42,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":33,"start":1}],"match_end":33,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":14,"start":1}],"match_end":14,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3311605,"start_pos":3311264,"strand":"reverse"},"product":"Schizosaccharomyces japonicus specific protein","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_00454.1"],"transcripts_by_uniquename":{"SJAG_00454.1":null},"uniprot_identifier":"B6JVN9","uniquename":"SJAG_00454"}


id: SJAG_00455
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"[2Fe-2S] cluster","range":{"end":207,"start":207}},{"assigned_by":"UniProtKB","ligand":"[2Fe-2S] cluster","range":{"end":216,"start":216}},{"assigned_by":"UniProtKB","ligand":"[2Fe-2S] cluster","range":{"end":219,"start":219}},{"assigned_by":"UniProtKB","ligand":"[2Fe-2S] cluster","range":{"end":221,"start":221}},{"assigned_by":"UniProtKB","ligand":"[4Fe-4S] cluster","range":{"end":265,"start":265}},{"assigned_by":"UniProtKB","ligand":"[4Fe-4S] cluster","range":{"end":268,"start":268}},{"assigned_by":"UniProtKB","ligand":"[4Fe-4S] cluster","range":{"end":276,"start":276}},{"assigned_by":"UniProtKB","ligand":"[4Fe-4S] cluster","range":{"end":279,"start":279}}],"chains":[{"assigned_by":"UniProtKB","range":{"end":309,"start":1}}],"cv_annotations":{"biological_process":[{"annotations":[111219],"is_not":false,"summary":null,"term":"GO:0044572"}],"cellular_component":[{"annotations":[111216],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[70944],"is_not":false,"summary":null,"term":"GO:0005758"},{"annotations":[111218],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[70947],"is_not":false,"summary":null,"term":"GO:0051537"},{"annotations":[70941],"is_not":false,"summary":null,"term":"GO:0051539"},{"annotations":[70945],"is_not":false,"summary":null,"term":"GO:0009055"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00455","GOA:B6JVP0","UniProtKB/Swiss-Prot:B6JVP0","EnsemblGenomes-Tr:EEB05441","InterPro:IPR007785","InterPro:IPR031838"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"}],"genes_by_uniquename":{"HGNC:28050":null,"SJAG_00455":null,"SPBC337.10c":null,"YKR071C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis","id":"PF05093","interpro_description":"Anamorsin, C-terminal","interpro_id":"IPR046408","interpro_name":"CIAPIN1","locations":[{"end":294,"start":204}],"match_end":294,"match_start":204,"name":"CIAPIN1"},{"dbname":"PFAM","description":"Fe-S cluster assembly protein DRE2 N-terminus","id":"PF16803","interpro_description":"Fe-S cluster assembly protein Dre2, N-terminal","interpro_id":"IPR031838","interpro_name":"Dre2_N","locations":[{"end":135,"start":3}],"match_end":135,"match_start":3,"name":"DRE2_N"},{"dbname":"PANTHER","id":"PTHR13273","interpro_description":"Anamorsin","interpro_id":"IPR007785","interpro_name":"Anamorsin","locations":[{"end":299,"start":3}],"match_end":299,"match_start":3,"name":"ANAMORSIN"},{"dbname":"HAMAP","description":"Fe-S cluster assembly protein <gene_name> [DRE2].","id":"MF_03115","interpro_description":"Anamorsin","interpro_id":"IPR007785","interpro_name":"Anamorsin","locations":[{"end":309,"start":1}],"match_end":309,"match_start":1,"name":"Anamorsin"}],"location":{"chromosome_name":"supercont5.1","end_pos":3310819,"start_pos":3309890,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":185,"start":173}},{"range":{"end":240,"start":228}}],"name":"dre2","ortholog_annotations":[{"gene_uniquename":"SJAG_00455","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28050","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00455","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00455","ortholog_taxonid":4932,"ortholog_uniquename":"YKR071C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00455","ortholog_taxonid":4932,"ortholog_uniquename":"YKR071C","reference_uniquename":"PMID:26896847"}],"product":"CIA machinery anamorsin Dre2","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051537","GO:0051539"],"not-binding":["GO:0009055"]}},"subset_termids":["GO:0005829","GO:0005634","GO:0016226","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005758":null,"GO:0005829":null,"GO:0009055":null,"GO:0044572":null,"GO:0051537":null,"GO:0051539":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00455.1"],"transcripts_by_uniquename":{"SJAG_00455.1":null},"uniprot_identifier":"B6JVP0","uniquename":"SJAG_00455"}


id: SJAG_00456
data:
  {"coiled_coil_coords":[{"range":{"end":145,"start":125}}],"cv_annotations":{"biological_process":[{"annotations":[111227],"is_not":false,"summary":null,"term":"GO:0033621"},{"annotations":[111228],"is_not":false,"summary":null,"term":"GO:0071030"}],"cellular_component":[{"annotations":[111223],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[111224],"is_not":false,"summary":null,"term":"GO:1990477"},{"annotations":[111225],"is_not":false,"summary":null,"term":"GO:0016604"}],"molecular_function":[{"annotations":[67235],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05442","GOA:B6JVP1","EnsemblGenomes-Gn:SJAG_00456","InterPro:IPR036855","InterPro:IPR000571","UniProtKB/TrEMBL:B6JVP1"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":84,"start":30}},{"range":{"end":380,"start":342}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"}],"genes_by_uniquename":{"HGNC:28972":null,"SJAG_00456":null,"SPBC337.12":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA-binding, Nab2-type zinc finger","id":"PF14608","locations":[{"end":232,"start":213},{"end":258,"start":240},{"end":285,"start":267},{"end":337,"start":318}],"match_end":337,"match_start":213,"name":"zf-CCCH_2"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger C3H1-type profile.","id":"PS50103","interpro_description":"Zinc finger, CCCH-type","interpro_id":"IPR000571","interpro_name":"Znf_CCCH","locations":[{"end":317,"start":207}],"match_end":317,"match_start":207,"name":"ZF_C3H1"},{"dbname":"SMART","id":"SM00356","interpro_description":"Zinc finger, CCCH-type","interpro_id":"IPR000571","interpro_name":"Znf_CCCH","locations":[{"end":260,"start":208},{"end":287,"start":262},{"end":338,"start":289}],"match_end":338,"match_start":208,"name":"c3hfinal6"},{"dbname":"SUPERFAMILY","id":"SSF90229","interpro_description":"Zinc finger, CCCH-type superfamily","interpro_id":"IPR036855","interpro_name":"Znf_CCCH_sf","locations":[{"end":314,"start":280}],"match_end":314,"match_start":280,"name":"CCCH zinc finger"},{"dbname":"GENE3D","id":"G3DSA:4.10.1000.10","locations":[{"end":353,"start":235}],"match_end":353,"match_start":235},{"dbname":"PANTHER","id":"PTHR46156","locations":[{"end":371,"start":211}],"match_end":371,"match_start":211,"name":"CCCH ZINGC FINGER"},{"dbname":"COILS","id":"Coil","locations":[{"end":145,"start":125}],"match_end":145,"match_start":125,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":84,"start":30},{"end":380,"start":342}],"match_end":380,"match_start":30,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":47,"start":30},{"end":66,"start":55}],"match_end":66,"match_start":30,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3309087,"start_pos":3307707,"strand":"reverse"},"name":"red5","ortholog_annotations":[{"gene_uniquename":"SJAG_00456","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28972","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00456","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.12","reference_uniquename":"PMID:21511999"}],"product":"MTREC (exosome adaptor) complex zf-CCCH type zinc finger subunit Red5","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"]}},"subset_termids":["GO:0005694","GO:0016071","GO:0005634","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0008270":null,"GO:0016604":null,"GO:0033621":null,"GO:0071030":null,"GO:1990477":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00456.1"],"transcripts_by_uniquename":{"SJAG_00456.1":null},"uniprot_identifier":"B6JVP1","uniquename":"SJAG_00456"}


id: SJAG_00457
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74306],"is_not":false,"summary":null,"term":"GO:0009267"},{"annotations":[74307],"is_not":false,"summary":null,"term":"GO:0010507"},{"annotations":[111236],"is_not":false,"summary":null,"term":"GO:0110045"},{"annotations":[111237],"is_not":false,"summary":null,"term":"GO:1904262"},{"annotations":[74309],"is_not":false,"summary":null,"term":"GO:1904263"}],"cellular_component":[{"annotations":[111230],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[60579],"is_not":false,"summary":null,"term":"GO:0012505"},{"annotations":[74303],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[74308],"is_not":false,"summary":null,"term":"GO:1990131"},{"annotations":[74305],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[74302],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[74304],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[111241],"is_not":false,"summary":null,"term":"GO:0043539"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00457","GOA:B6JVP2","InterPro:IPR027417","UniProtKB/TrEMBL:B6JVP2","EnsemblGenomes-Tr:EEB05443","InterPro:IPR039397","InterPro:IPR006762"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"}],"genes_by_uniquename":{"HGNC:16963":null,"HGNC:19901":null,"SJAG_00457":null,"SPBC337.13c":null,"YML121W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Gtr1/RagA G protein conserved region","id":"PF04670","interpro_description":"Gtr1/RagA G protein","interpro_id":"IPR006762","interpro_name":"Gtr1_RagA","locations":[{"end":232,"start":4}],"match_end":232,"match_start":4,"name":"Gtr1_RagA"},{"dbname":"CDD","description":"RagA_like","id":"cd11384","interpro_description":"RagA/B","interpro_id":"IPR039397","interpro_name":"RagA/B","locations":[{"end":287,"start":4}],"match_end":287,"match_start":4,"name":"RagA_like"},{"dbname":"FUNFAM","description":"Ras-related GTP-binding protein A","id":"G3DSA:3.30.450.190:FF:000002","locations":[{"end":306,"start":178}],"match_end":306,"match_start":178},{"dbname":"FUNFAM","description":"Ras-related GTP-binding protein A","id":"G3DSA:3.40.50.300:FF:000276","locations":[{"end":177,"start":1}],"match_end":177,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":182,"start":3}],"match_end":182,"match_start":3,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":177,"start":1}],"match_end":177,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:3.30.450.190","locations":[{"end":305,"start":178}],"match_end":305,"match_start":178},{"dbname":"PANTHER","id":"PTHR11259","interpro_description":"Gtr1/RagA G protein","interpro_id":"IPR006762","interpro_name":"Gtr1_RagA","locations":[{"end":301,"start":2}],"match_end":301,"match_start":2,"name":"RAS-RELATED GTP BINDING RAG/GTR YEAST"}],"location":{"chromosome_name":"supercont5.1","end_pos":3307294,"start_pos":3306371,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":19,"start":7}}],"name":"gtr1","ortholog_annotations":[{"gene_uniquename":"SJAG_00457","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16963","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00457","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19901","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00457","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00457","ortholog_taxonid":4932,"ortholog_uniquename":"YML121W","reference_uniquename":"PMID:29761456"}],"product":"RagA/B GTPase Gtr1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525"],"not-binding":["GO:0003924","GO:0043539"]}},"subset_termids":["GO:0006914","GO:0030234","GO:0023052","GO:0003924","GO:0005634","GO:0005829","GO:0005773","GO:0098772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0003924":null,"GO:0005525":null,"GO:0005634":null,"GO:0005829":null,"GO:0009267":null,"GO:0010507":null,"GO:0012505":null,"GO:0043539":null,"GO:0110045":null,"GO:1904262":null,"GO:1904263":null,"GO:1990131":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00457.1"],"transcripts_by_uniquename":{"SJAG_00457.1":null},"uniprot_identifier":"B6JVP2","uniquename":"SJAG_00457"}


id: SJAG_00458
data:
  {"cv_annotations":{"biological_process":[{"annotations":[58110],"is_not":false,"summary":null,"term":"GO:0001172"},{"annotations":[72423],"is_not":false,"summary":null,"term":"GO:0006367"}],"cellular_component":[{"annotations":[72422],"is_not":false,"summary":null,"term":"GO:0005665"}],"molecular_function":[{"annotations":[111247],"is_not":false,"summary":null,"term":"GO:0003899"},{"annotations":[72424],"is_not":false,"summary":null,"term":"GO:0031369"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00458","InterPro:IPR006590","EnsemblGenomes-Tr:EEB05444","GOA:B6JVP3","InterPro:IPR005574","InterPro:IPR010997","InterPro:IPR038324","UniProtKB/TrEMBL:B6JVP3"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"}],"genes_by_uniquename":{"HGNC:9191":null,"SJAG_00458":null,"SPBC337.14":null,"YJL140W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA polymerase Rpb4","id":"PF03874","interpro_description":"RNA polymerase subunit Rpb4/RPC9","interpro_id":"IPR005574","interpro_name":"Rpb4/RPC9","locations":[{"end":133,"start":26}],"match_end":133,"match_start":26,"name":"RNA_pol_Rpb4"},{"dbname":"SMART","id":"SM00657","interpro_description":"RNA polymerase Rpb4/RPC9, core","interpro_id":"IPR006590","interpro_name":"RNA_pol_Rpb4/RPC9_core","locations":[{"end":136,"start":19}],"match_end":136,"match_start":19,"name":"rpol4neu2"},{"dbname":"SUPERFAMILY","id":"SSF47819","interpro_description":"HRDC-like superfamily","interpro_id":"IPR010997","interpro_name":"HRDC-like_sf","locations":[{"end":135,"start":6}],"match_end":135,"match_start":6,"name":"HRDC-like"},{"dbname":"GENE3D","id":"G3DSA:1.20.1250.40","interpro_description":"Rpb4/RPC9 superfamily","interpro_id":"IPR038324","interpro_name":"Rpb4/RPC9_sf","locations":[{"end":137,"start":4}],"match_end":137,"match_start":4},{"dbname":"PANTHER","id":"PTHR21297","interpro_description":"DNA-directed RNA polymerase II subunit Rpb4-like","interpro_id":"IPR045222","interpro_name":"Rpb4-like","locations":[{"end":136,"start":7}],"match_end":136,"match_start":7,"name":"DNA-DIRECTED RNA POLYMERASE II"}],"location":{"chromosome_name":"supercont5.1","end_pos":3305657,"start_pos":3305098,"strand":"reverse"},"name":"rpb4","ortholog_annotations":[{"gene_uniquename":"SJAG_00458","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9191","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00458","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00458","ortholog_taxonid":4932,"ortholog_uniquename":"YJL140W","reference_uniquename":"PMID:29761456"}],"product":"DNA-directed RNA polymerase II complex subunit Rpb4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0031369"],"not-binding":["GO:0003899"]}},"subset_termids":["GO:0005634","GO:0016779","GO:0140098","GO:0006351","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001172":null,"GO:0003899":null,"GO:0005665":null,"GO:0006367":null,"GO:0031369":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00458.1"],"transcripts_by_uniquename":{"SJAG_00458.1":null},"uniprot_identifier":"B6JVP3","uniquename":"SJAG_00458"}


id: SJAG_00459
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"Fe cation","range":{"end":66,"start":66}},{"assigned_by":"UniProtKB","ligand":"Fe cation","range":{"end":98,"start":98}},{"assigned_by":"UniProtKB","ligand":"Fe cation","range":{"end":98,"start":98}},{"assigned_by":"UniProtKB","ligand":"Fe cation","range":{"end":101,"start":101}},{"assigned_by":"UniProtKB","ligand":"Fe cation","range":{"end":150,"start":150}},{"assigned_by":"UniProtKB","ligand":"Fe cation","range":{"end":188,"start":188}},{"assigned_by":"UniProtKB","ligand":"Fe cation","range":{"end":188,"start":188}},{"assigned_by":"UniProtKB","ligand":"Fe cation","range":{"end":191,"start":191}}],"cv_annotations":{"biological_process":[{"annotations":[76045],"is_not":false,"summary":null,"term":"GO:0006744"}],"cellular_component":[{"annotations":[76044],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[62964],"is_not":false,"summary":null,"term":"GO:0008682"},{"annotations":[111252],"is_not":false,"summary":null,"term":"GO:0160224"}],"mondo":[{"annotations":[88164],"is_not":false,"summary":null,"term":"MONDO:0957874"},{"annotations":[87733],"is_not":false,"summary":null,"term":"MONDO:0014754"}]},"dbxrefs":["InterPro:IPR011566","EnsemblGenomes-Tr:EEB05445","EnsemblGenomes-Gn:SJAG_00459","GOA:B6JVP4","UniProtKB/TrEMBL:B6JVP4","InterPro:IPR009078"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"}],"genes_by_uniquename":{"HGNC:2244":null,"SJAG_00459":null,"SPBC337.15c":null,"YOR125C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ubiquinone biosynthesis protein COQ7","id":"PF03232","locations":[{"end":225,"start":54}],"match_end":225,"match_start":54,"name":"COQ7"},{"dbname":"CDD","description":"DMQH","id":"cd01042","interpro_description":"Ubiquinone biosynthesis protein Coq7","interpro_id":"IPR011566","interpro_name":"Ubq_synth_Coq7","locations":[{"end":227,"start":55}],"match_end":227,"match_start":55,"name":"DMQH"},{"dbname":"SUPERFAMILY","id":"SSF47240","interpro_description":"Ferritin-like superfamily","interpro_id":"IPR009078","interpro_name":"Ferritin-like_SF","locations":[{"end":194,"start":57}],"match_end":194,"match_start":57,"name":"Ferritin-like"},{"dbname":"PANTHER","id":"PTHR11237","interpro_description":"Ubiquinone biosynthesis protein Coq7","interpro_id":"IPR011566","interpro_name":"Ubq_synth_Coq7","locations":[{"end":228,"start":13}],"match_end":228,"match_start":13,"name":"COENZYME Q10 BIOSYNTHESIS PROTEIN 7"},{"dbname":"HAMAP","description":"3-demethoxyubiquinol 3-hydroxylase [coq7].","id":"MF_01658","interpro_description":"Ubiquinone biosynthesis protein Coq7","interpro_id":"IPR011566","interpro_name":"Ubq_synth_Coq7","locations":[{"end":228,"start":15}],"match_end":228,"match_start":15,"name":"COQ7"}],"location":{"chromosome_name":"supercont5.1","end_pos":3304914,"start_pos":3304228,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":35,"start":23}}],"name":"coq7","ortholog_annotations":[{"gene_uniquename":"SJAG_00459","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2244","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00459","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00459","ortholog_taxonid":4932,"ortholog_uniquename":"YOR125C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00459","ortholog_taxonid":4932,"ortholog_uniquename":"YOR125C","reference_uniquename":"PMID:26896847"}],"product":"3-demethoxyubiquinone 3-hydroxylase (NADH) Coq7","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0160224","GO:0008682"]}},"subset_termids":["GO:0016491","MONDO:0005559","GO:0006744","MONDO:0005066","GO:0005739","MONDO:0004069","MONDO:0005244","MONDO:0006025"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0006744":null,"GO:0008682":null,"GO:0160224":null,"MONDO:0014754":null,"MONDO:0957874":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00459.1"],"transcripts_by_uniquename":{"SJAG_00459.1":null},"uniprot_identifier":"B6JVP4","uniquename":"SJAG_00459"}


id: SJAG_00460
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105198],"is_not":false,"summary":null,"term":"GO:0006974"},{"annotations":[105199],"is_not":false,"summary":null,"term":"GO:0140013"},{"annotations":[105200],"is_not":false,"summary":null,"term":"GO:2000816"}],"cellular_component":[{"annotations":[105194],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[105195],"is_not":false,"summary":null,"term":"GO:0072687"},{"annotations":[105196],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[105197],"is_not":false,"summary":null,"term":"GO:1990520"}],"molecular_function":[{"annotations":[105201],"is_not":false,"summary":null,"term":"GO:0004866"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00460","UniProtKB/TrEMBL:B6JVP5","EnsemblGenomes-Tr:EEB05446"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":24,"start":1}},{"range":{"end":133,"start":112}},{"range":{"end":337,"start":244}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"}],"genes_by_uniquename":{"HGNC:13422":null,"HGNC:9690":null,"HGNC:9691":null,"SJAG_00460":null,"SPBC14C8.01c":null,"YDR113C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":24,"start":1},{"end":133,"start":112},{"end":337,"start":244}],"match_end":337,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":122,"start":112},{"end":282,"start":271},{"end":320,"start":303}],"match_end":320,"match_start":112,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3303933,"start_pos":3302875,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":208,"start":183}},{"range":{"end":234,"start":220}}],"name":"cut2","ortholog_annotations":[{"gene_uniquename":"SJAG_00460","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13422","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00460","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9690","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00460","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9691","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00460","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC14C8.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00460","ortholog_taxonid":4932,"ortholog_uniquename":"YDR113C","reference_uniquename":"PMID:29761456"}],"product":"sister chromatid separation inhibitor, securin","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004866"]}},"subset_termids":["GO:0098772","GO:0140013","GO:0030234","GO:0015630","GO:0005634","GO:0000070"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004866":null,"GO:0005634":null,"GO:0005737":null,"GO:0006974":null,"GO:0072687":null,"GO:0140013":null,"GO:1990520":null,"GO:2000816":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00460.1"],"transcripts_by_uniquename":{"SJAG_00460.1":null},"uniprot_identifier":"B6JVP5","uniquename":"SJAG_00460"}


id: SJAG_00461
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":211,"start":211}},{"assigned_by":"UniProtKB","range":{"end":345,"start":345}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":159,"start":159}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":168,"start":168}},{"assigned_by":"UniProtKB","ligand":"Mg(2+)","range":{"end":246,"start":246}},{"assigned_by":"UniProtKB","ligand":"Mg(2+)","range":{"end":295,"start":295}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":295,"start":295}},{"assigned_by":"UniProtKB","ligand":"Mg(2+)","range":{"end":320,"start":320}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":320,"start":320}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":375,"start":372}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":396,"start":396}}],"cv_annotations":{"biological_process":[{"annotations":[107396],"is_not":false,"summary":null,"term":"GO:0061621"}],"cellular_component":[{"annotations":[107390],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[71602],"is_not":false,"summary":null,"term":"GO:0000015"}],"molecular_function":[{"annotations":[57069],"is_not":false,"summary":null,"term":"GO:0000287"},{"annotations":[71603],"is_not":false,"summary":null,"term":"GO:0004634"}],"mondo":[{"annotations":[86995],"is_not":false,"summary":null,"term":"MONDO:0013046"}]},"dbxrefs":["InterPro:IPR020811","EnsemblGenomes-Gn:SJAG_00461","InterPro:IPR000941","UniProtKB/TrEMBL:B6JVP6","InterPro:IPR020810","InterPro:IPR029017","InterPro:IPR020809","InterPro:IPR036849","EnsemblGenomes-Tr:EEB05447","GOA:B6JVP6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"}],"genes_by_uniquename":{"HGNC:3350":null,"HGNC:3353":null,"HGNC:3354":null,"SJAG_00461":null,"SPBC1815.01":null,"YGR254W":null,"YHR174W":null,"YMR323W":null,"YOR393W":null,"YPL281C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Enolase, C-terminal TIM barrel domain","id":"PF00113","interpro_description":"Enolase, C-terminal TIM barrel domain","interpro_id":"IPR020810","interpro_name":"Enolase_C","locations":[{"end":432,"start":144}],"match_end":432,"match_start":144,"name":"Enolase_C"},{"dbname":"PFAM","description":"Enolase, N-terminal domain","id":"PF03952","interpro_description":"Enolase, N-terminal","interpro_id":"IPR020811","interpro_name":"Enolase_N","locations":[{"end":134,"start":3}],"match_end":134,"match_start":3,"name":"Enolase_N"},{"dbname":"CDD","description":"enolase","id":"cd03313","interpro_description":"Enolase","interpro_id":"IPR000941","interpro_name":"Enolase","locations":[{"end":417,"start":5}],"match_end":417,"match_start":5,"name":"enolase"},{"dbname":"PROSITE_PATTERNS","description":"Enolase signature.","id":"PS00164","interpro_description":"Enolase, conserved site","interpro_id":"IPR020809","interpro_name":"Enolase_CS","locations":[{"end":355,"start":342}],"match_end":355,"match_start":342,"name":"ENOLASE"},{"dbname":"SMART","id":"SM01193","interpro_description":"Enolase, N-terminal","interpro_id":"IPR020811","interpro_name":"Enolase_N","locations":[{"end":134,"start":3}],"match_end":134,"match_start":3,"name":"Enolase_N_3"},{"dbname":"SMART","id":"SM01192","interpro_description":"Enolase, C-terminal TIM barrel domain","interpro_id":"IPR020810","interpro_name":"Enolase_C","locations":[{"end":433,"start":143}],"match_end":433,"match_start":143,"name":"Enolase_C_3"},{"dbname":"PRINTS","description":"Enolase signature","id":"PR00148","interpro_description":"Enolase","interpro_id":"IPR000941","interpro_name":"Enolase","locations":[{"end":49,"start":35},{"end":123,"start":107},{"end":178,"start":165},{"end":330,"start":319},{"end":356,"start":342},{"end":388,"start":371}],"match_end":388,"match_start":35,"name":"ENOLASE"},{"dbname":"FUNFAM","description":"Enolase","id":"G3DSA:3.30.390.10:FF:000001","locations":[{"end":127,"start":1}],"match_end":127,"match_start":1},{"dbname":"FUNFAM","description":"Enolase 1","id":"G3DSA:3.20.20.120:FF:000002","locations":[{"end":435,"start":128}],"match_end":435,"match_start":128},{"dbname":"SUPERFAMILY","id":"SSF51604","interpro_description":"Enolase-like, C-terminal domain superfamily","interpro_id":"IPR036849","interpro_name":"Enolase-like_C_sf","locations":[{"end":431,"start":144}],"match_end":431,"match_start":144,"name":"Enolase C-terminal domain-like"},{"dbname":"SUPERFAMILY","id":"SSF54826","interpro_description":"Enolase-like, N-terminal","interpro_id":"IPR029017","interpro_name":"Enolase-like_N","locations":[{"end":138,"start":3}],"match_end":138,"match_start":3,"name":"Enolase N-terminal domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.120","interpro_description":"Enolase-like, C-terminal domain superfamily","interpro_id":"IPR036849","interpro_name":"Enolase-like_C_sf","locations":[{"end":439,"start":128}],"match_end":439,"match_start":128},{"dbname":"GENE3D","id":"G3DSA:3.30.390.10","interpro_description":"Enolase-like, N-terminal","interpro_id":"IPR029017","interpro_name":"Enolase-like_N","locations":[{"end":127,"start":1}],"match_end":127,"match_start":1},{"dbname":"PANTHER","id":"PTHR11902","interpro_description":"Enolase","interpro_id":"IPR000941","interpro_name":"Enolase","locations":[{"end":431,"start":1}],"match_end":431,"match_start":1,"name":"ENOLASE"},{"dbname":"PIRSF","id":"PIRSF001400","interpro_description":"Enolase","interpro_id":"IPR000941","interpro_name":"Enolase","locations":[{"end":433,"start":1}],"match_end":433,"match_start":1,"name":"Enolase"},{"dbname":"HAMAP","description":"Enolase [eno].","id":"MF_00318","interpro_description":"Enolase","interpro_id":"IPR000941","interpro_name":"Enolase","locations":[{"end":419,"start":1}],"match_end":419,"match_start":1,"name":"Enolase"},{"dbname":"NCBIFAM","description":"phosphopyruvate hydratase","id":"TIGR01060","interpro_description":"Enolase","interpro_id":"IPR000941","interpro_name":"Enolase","locations":[{"end":431,"start":3}],"match_end":431,"match_start":3,"name":"eno"},{"dbname":"SFLD","description":"enolase","id":"SFLDG00178","locations":[{"end":419,"start":3}],"match_end":419,"match_start":3,"name":"enolase"},{"dbname":"SFLD","description":"enolase","id":"SFLDF00002","interpro_description":"Enolase","interpro_id":"IPR000941","interpro_name":"Enolase","locations":[{"end":419,"start":3}],"match_end":419,"match_start":3,"name":"enolase"}],"location":{"chromosome_name":"supercont5.1","end_pos":3302528,"start_pos":3301203,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":123,"start":116}},{"range":{"end":439,"start":421}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00461","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3350","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3353","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3354","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1815.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YGR254W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YGR254W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YHR174W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YHR174W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YMR323W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YMR323W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YOR393W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YOR393W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YPL281C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YPL281C","reference_uniquename":"PMID:26896847"}],"product":"enolase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000287"],"not-binding":["GO:0004634"]}},"subset_termids":["GO:0005975","GO:0005829","MONDO:0005066","MONDO:0019254","GO:0005634","GO:0006091","GO:0055086","GO:0016829","MONDO:0037792"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000015":null,"GO:0000287":null,"GO:0004634":null,"GO:0005634":null,"GO:0061621":null,"MONDO:0013046":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00461.1"],"transcripts_by_uniquename":{"SJAG_00461.1":null},"uniprot_identifier":"B6JVP6","uniquename":"SJAG_00461"}


id: SJAG_00462
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107384],"is_not":false,"summary":null,"term":"GO:0140053"}],"cellular_component":[{"annotations":[107383],"is_not":false,"summary":null,"term":"GO:0005739"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05448","UniProtKB/TrEMBL:B6JVP7","EnsemblGenomes-Gn:SJAG_00462"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"}],"genes_by_uniquename":{"SJAG_00462":null,"SPBC17G9.13c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"LYR motif-containing protein 2-like","id":"PF20263","interpro_description":"LYR motif-containing protein Cup1-like, N-terminal domain","interpro_id":"IPR046896","interpro_name":"Cup1-like_N","locations":[{"end":90,"start":3}],"match_end":90,"match_start":3,"name":"LYRM2-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3299682,"start_pos":3298884,"strand":"reverse"},"name":"cup1","ortholog_annotations":[{"gene_uniquename":"SJAG_00462","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.13c","reference_uniquename":"PMID:21511999"}],"product":"mitochondrial LYR family protein Cup1/Lyr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005739","GO:0140053"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0140053":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00462.1"],"transcripts_by_uniquename":{"SJAG_00462.1":null},"uniprot_identifier":"B6JVP7","uniquename":"SJAG_00462"}


id: SJAG_00463
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[107380],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107381],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[107382],"is_not":false,"summary":null,"term":"GO:0016787"}]},"dbxrefs":["InterPro:IPR023214","InterPro:IPR036412","EnsemblGenomes-Gn:SJAG_00463","UniProtKB/TrEMBL:B6JVP8","EnsemblGenomes-Tr:EEB05449"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"}],"genes_by_uniquename":{"SJAG_00463":null,"SPBC17G9.12c":null,"YCR015C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"SUPERFAMILY","id":"SSF56784","interpro_description":"HAD-like superfamily","interpro_id":"IPR036412","interpro_name":"HAD-like_sf","locations":[{"end":53,"start":2},{"end":222,"start":82}],"match_end":222,"match_start":2,"name":"HAD-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1000","interpro_description":"HAD superfamily","interpro_id":"IPR023214","interpro_name":"HAD_sf","locations":[{"end":236,"start":2}],"match_end":236,"match_start":2},{"dbname":"PANTHER","id":"PTHR28181","interpro_description":"HAD-like hydrolase superfamily phosphatase","interpro_id":"IPR050849","interpro_name":"HAD-like_hydrolase_phosphatase","locations":[{"end":286,"start":2}],"match_end":286,"match_start":2,"name":"UPF0655 PROTEIN YCR015C"}],"location":{"chromosome_name":"supercont5.1","end_pos":3298646,"start_pos":3297670,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00463","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00463","ortholog_taxonid":4932,"ortholog_uniquename":"YCR015C","reference_uniquename":"PMID:29761456"}],"product":"HAD superfamily hydrolase, unknown role","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016787"]}},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0016787":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00463.1"],"transcripts_by_uniquename":{"SJAG_00463.1":null},"uniprot_identifier":"B6JVP8","uniquename":"SJAG_00463"}


id: SJAG_00464
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":323,"start":323}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":147,"start":147}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":231,"start":231}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":266,"start":266}},{"assigned_by":"UniProtKB","ligand":"Mn(2+)","range":{"end":578,"start":578}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":650,"start":650}},{"assigned_by":"UniProtKB","ligand":"Mn(2+)","range":{"end":746,"start":746}},{"assigned_by":"UniProtKB","ligand":"Mn(2+)","range":{"end":776,"start":776}},{"assigned_by":"UniProtKB","ligand":"Mn(2+)","range":{"end":778,"start":778}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":911,"start":911}}],"cv_annotations":{"PSI-MOD":[{"annotations":[82468],"is_not":false,"summary":null,"term":"MOD:00126"},{"annotations":[82467],"is_not":false,"summary":null,"term":"MOD:00123"}],"biological_process":[{"annotations":[107376],"is_not":false,"summary":null,"term":"GO:0006091"}],"cellular_component":[{"annotations":[74840],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[61307],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[61308],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[74841],"is_not":false,"summary":null,"term":"GO:0004736"}],"mondo":[{"annotations":[87600],"is_not":false,"summary":null,"term":"MONDO:0009949"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00464","InterPro:IPR003379","InterPro:IPR013785","InterPro:IPR005482","InterPro:IPR005930","InterPro:IPR005479","InterPro:IPR011053","UniProtKB/TrEMBL:B6JVP9","EnsemblGenomes-Tr:EEB05450","InterPro:IPR011764","InterPro:IPR000089","InterPro:IPR000891","GOA:B6JVP9","InterPro:IPR011761","InterPro:IPR005481","InterPro:IPR016185","InterPro:IPR001882","InterPro:IPR011054"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":1116,"start":1097}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"}],"genes_by_uniquename":{"HGNC:8636":null,"SJAG_00464":null,"SPBC17G9.11c":null,"YBR218C":null,"YGL062W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Carbamoyl-phosphate synthase L chain, ATP binding domain","id":"PF02786","interpro_description":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_id":"IPR005479","interpro_name":"CbamoylP_synth_lsu-like_ATP-bd","locations":[{"end":354,"start":146}],"match_end":354,"match_start":146,"name":"CPSase_L_D2"},{"dbname":"PFAM","description":"Conserved carboxylase domain","id":"PF02436","interpro_description":"Carboxylase, conserved domain","interpro_id":"IPR003379","interpro_name":"Carboxylase_cons_dom","locations":[{"end":1064,"start":864}],"match_end":1064,"match_start":864,"name":"PYC_OADA"},{"dbname":"PFAM","description":"HMGL-like","id":"PF00682","interpro_description":"Pyruvate carboxyltransferase","interpro_id":"IPR000891","interpro_name":"PYR_CT","locations":[{"end":825,"start":723}],"match_end":825,"match_start":723,"name":"HMGL-like"},{"dbname":"PFAM","description":"Biotin carboxylase, N-terminal domain","id":"PF00289","interpro_description":"Biotin carboxylase-like, N-terminal domain","interpro_id":"IPR005481","interpro_name":"BC-like_N","locations":[{"end":141,"start":30}],"match_end":141,"match_start":30,"name":"Biotin_carb_N"},{"dbname":"PFAM","description":"Biotin carboxylase C-terminal domain","id":"PF02785","interpro_description":"Biotin carboxylase, C-terminal","interpro_id":"IPR005482","interpro_name":"Biotin_COase_C","locations":[{"end":477,"start":370}],"match_end":477,"match_start":370,"name":"Biotin_carb_C"},{"dbname":"PFAM","description":"Biotin-requiring enzyme","id":"PF00364","interpro_description":"Biotin/lipoyl attachment","interpro_id":"IPR000089","interpro_name":"Biotin_lipoyl","locations":[{"end":1180,"start":1116}],"match_end":1180,"match_start":1116,"name":"Biotin_lipoyl"},{"dbname":"CDD","description":"biotinyl_domain","id":"cd06850","locations":[{"end":1181,"start":1115}],"match_end":1181,"match_start":1115,"name":"biotinyl_domain"},{"dbname":"CDD","description":"DRE_TIM_PC_TC_5S","id":"cd07937","locations":[{"end":853,"start":571}],"match_end":853,"match_start":571,"name":"DRE_TIM_PC_TC_5S"},{"dbname":"PROSITE_PATTERNS","description":"Biotin-requiring enzymes attachment site.","id":"PS00188","interpro_description":"Biotin-binding site","interpro_id":"IPR001882","interpro_name":"Biotin_BS","locations":[{"end":1155,"start":1138}],"match_end":1155,"match_start":1138,"name":"BIOTIN"},{"dbname":"PROSITE_PATTERNS","description":"Carbamoyl-phosphate synthase subdomain signature 2.","id":"PS00867","interpro_description":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_id":"IPR005479","interpro_name":"CbamoylP_synth_lsu-like_ATP-bd","locations":[{"end":324,"start":317}],"match_end":324,"match_start":317,"name":"CPSASE_2"},{"dbname":"PROSITE_PATTERNS","description":"Carbamoyl-phosphate synthase subdomain signature 1.","id":"PS00866","interpro_description":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_id":"IPR005479","interpro_name":"CbamoylP_synth_lsu-like_ATP-bd","locations":[{"end":198,"start":184}],"match_end":198,"match_start":184,"name":"CPSASE_1"},{"dbname":"PROSITE_PROFILES","description":"Pyruvate carboxyltransferase domain.","id":"PS50991","interpro_description":"Pyruvate carboxyltransferase","interpro_id":"IPR000891","interpro_name":"PYR_CT","locations":[{"end":837,"start":569}],"match_end":837,"match_start":569,"name":"PYR_CT"},{"dbname":"PROSITE_PROFILES","description":"ATP-grasp fold profile.","id":"PS50975","interpro_description":"ATP-grasp fold","interpro_id":"IPR011761","interpro_name":"ATP-grasp","locations":[{"end":348,"start":151}],"match_end":348,"match_start":151,"name":"ATP_GRASP"},{"dbname":"PROSITE_PROFILES","description":"Biotinyl/lipoyl domain profile.","id":"PS50968","interpro_description":"Biotin/lipoyl attachment","interpro_id":"IPR000089","interpro_name":"Biotin_lipoyl","locations":[{"end":1182,"start":1107}],"match_end":1182,"match_start":1107,"name":"BIOTINYL_LIPOYL"},{"dbname":"PROSITE_PROFILES","description":"Biotin carboxylation domain profile.","id":"PS50979","interpro_description":"Biotin carboxylation domain","interpro_id":"IPR011764","interpro_name":"Biotin_carboxylation_dom","locations":[{"end":481,"start":29}],"match_end":481,"match_start":29,"name":"BC"},{"dbname":"SMART","id":"SM00878","interpro_description":"Biotin carboxylase, C-terminal","interpro_id":"IPR005482","interpro_name":"Biotin_COase_C","locations":[{"end":477,"start":370}],"match_end":477,"match_start":370,"name":"Biotin_carb_C_2"},{"dbname":"FUNFAM","description":"Biotin carboxylase","id":"G3DSA:3.30.1490.20:FF:000018","locations":[{"end":233,"start":163}],"match_end":233,"match_start":163},{"dbname":"FUNFAM","description":"Propionyl-CoA carboxylase subunit alpha","id":"G3DSA:3.40.50.20:FF:000010","locations":[{"end":162,"start":26}],"match_end":162,"match_start":26},{"dbname":"FUNFAM","description":"Pyruvate carboxylase","id":"G3DSA:3.30.470.20:FF:000012","locations":[{"end":485,"start":18}],"match_end":485,"match_start":18},{"dbname":"FUNFAM","description":"Pyruvate carboxylase","id":"G3DSA:3.20.20.70:FF:000033","locations":[{"end":1040,"start":524}],"match_end":1040,"match_start":524},{"dbname":"FUNFAM","description":"Acetyl-CoA carboxylase biotin carboxyl carrier protein","id":"G3DSA:2.40.50.100:FF:000003","locations":[{"end":1182,"start":1107}],"match_end":1182,"match_start":1107},{"dbname":"SUPERFAMILY","id":"SSF56059","locations":[{"end":382,"start":114}],"match_end":382,"match_start":114,"name":"Glutathione synthetase ATP-binding domain-like"},{"dbname":"SUPERFAMILY","id":"SSF51246","interpro_description":"Rudiment single hybrid motif","interpro_id":"IPR011054","interpro_name":"Rudment_hybrid_motif","locations":[{"end":483,"start":365}],"match_end":483,"match_start":365,"name":"Rudiment single hybrid motif"},{"dbname":"SUPERFAMILY","id":"SSF51230","interpro_description":"Single hybrid motif","interpro_id":"IPR011053","interpro_name":"Single_hybrid_motif","locations":[{"end":1182,"start":1103}],"match_end":1182,"match_start":1103,"name":"Single hybrid motif"},{"dbname":"SUPERFAMILY","id":"SSF89000","locations":[{"end":1042,"start":869}],"match_end":1042,"match_start":869,"name":"post-HMGL domain-like"},{"dbname":"SUPERFAMILY","id":"SSF51569","locations":[{"end":872,"start":570}],"match_end":872,"match_start":570,"name":"Aldolase"},{"dbname":"SUPERFAMILY","id":"SSF52440","interpro_description":"Pre-ATP-grasp domain superfamily","interpro_id":"IPR016185","interpro_name":"PreATP-grasp_dom_sf","locations":[{"end":144,"start":27}],"match_end":144,"match_start":27,"name":"PreATP-grasp domain"},{"dbname":"GENE3D","id":"G3DSA:2.40.50.100","locations":[{"end":1183,"start":1105}],"match_end":1183,"match_start":1105},{"dbname":"GENE3D","id":"G3DSA:3.30.470.20","locations":[{"end":485,"start":19}],"match_end":485,"match_start":19},{"dbname":"GENE3D","id":"G3DSA:3.20.20.70","interpro_description":"Aldolase-type TIM barrel","interpro_id":"IPR013785","interpro_name":"Aldolase_TIM","locations":[{"end":1043,"start":525}],"match_end":1043,"match_start":525,"name":"Aldolase class I"},{"dbname":"PANTHER","id":"PTHR43778","interpro_description":"Pyruvate carboxylase-like","interpro_id":"IPR055268","interpro_name":"PCB-like","locations":[{"end":1182,"start":19}],"match_end":1182,"match_start":19,"name":"PYRUVATE CARBOXYLASE"},{"dbname":"PIRSF","id":"PIRSF001594","interpro_description":"Pyruvate carboxylase","interpro_id":"IPR005930","interpro_name":"Pyruv_COase","locations":[{"end":1183,"start":26}],"match_end":1183,"match_start":26,"name":"PCB"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":1116,"start":1097}],"match_end":1116,"match_start":1097,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":1110,"start":1097}],"match_end":1110,"match_start":1097,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"pyruvate carboxylase subunit B","id":"NF006761","locations":[{"end":1182,"start":571}],"match_end":1182,"match_start":571,"name":"PRK09282.1"},{"dbname":"NCBIFAM","description":"pyruvate carboxylase","id":"NF009554","locations":[{"end":1182,"start":29}],"match_end":1182,"match_start":29,"name":"PRK12999.1"},{"dbname":"NCBIFAM","description":"pyruvate carboxylase","id":"TIGR01235","interpro_description":"Pyruvate carboxylase","interpro_id":"IPR005930","interpro_name":"Pyruv_COase","locations":[{"end":1182,"start":32}],"match_end":1182,"match_start":32,"name":"pyruv_carbox"}],"location":{"chromosome_name":"supercont5.1","end_pos":3297063,"start_pos":3293509,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":168,"start":157}},{"range":{"end":202,"start":191}}],"name":"pyr1","ortholog_annotations":[{"gene_uniquename":"SJAG_00464","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8636","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00464","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00464","ortholog_taxonid":4932,"ortholog_uniquename":"YBR218C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00464","ortholog_taxonid":4932,"ortholog_uniquename":"YBR218C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00464","ortholog_taxonid":4932,"ortholog_uniquename":"YGL062W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00464","ortholog_taxonid":4932,"ortholog_uniquename":"YGL062W","reference_uniquename":"PMID:26896847"}],"product":"pyruvate carboxylase Pyr1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0046872","GO:0005524"],"not-binding":["GO:0004736"]}},"subset_termids":["GO:0005829","GO:0006091","MONDO:0005066","MONDO:0037792","GO:0016874"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004736":null,"GO:0005524":null,"GO:0005829":null,"GO:0006091":null,"GO:0046872":null,"MOD:00123":null,"MOD:00126":null,"MONDO:0009949":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00464.1"],"transcripts_by_uniquename":{"SJAG_00464.1":null},"uniprot_identifier":"B6JVP9","uniquename":"SJAG_00464"}


id: SJAG_00465
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107367],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[107369],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[96785],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[107365],"is_not":false,"summary":null,"term":"GO:0022627"}],"molecular_function":[{"annotations":[107371],"is_not":false,"summary":null,"term":"GO:0019843"},{"annotations":[67891],"is_not":false,"summary":null,"term":"GO:0003735"}],"mondo":[{"annotations":[88603],"is_not":false,"summary":null,"term":"MONDO:0012938"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00465","InterPro:IPR031310","EnsemblGenomes-Tr:EEB05451","InterPro:IPR020929","InterPro:IPR031309","InterPro:IPR022803","UniProtKB/TrEMBL:B6JVQ0","InterPro:IPR002132","GOA:B6JVQ0"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"}],"genes_by_uniquename":{"HGNC:10301":null,"SJAG_00465":null,"SPAC26A3.07c":null,"SPBC17G9.10":null,"YGR085C":null,"YPR102C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ribosomal L5P family C-terminus","id":"PF00673","interpro_description":"Large ribosomal subunit protein uL5, C-terminal","interpro_id":"IPR031309","interpro_name":"Ribosomal_uL5_C","locations":[{"end":140,"start":64}],"match_end":140,"match_start":64,"name":"Ribosomal_L5_C"},{"dbname":"PFAM","description":"Ribosomal protein L5","id":"PF00281","interpro_description":"Large ribosomal subunit protein uL5, N-terminal","interpro_id":"IPR031310","interpro_name":"Ribosomal_uL5_N","locations":[{"end":60,"start":7}],"match_end":60,"match_start":7,"name":"Ribosomal_L5"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L5 signature.","id":"PS00358","interpro_description":"Large ribosomal subunit protein uL5, conserved site","interpro_id":"IPR020929","interpro_name":"Ribosomal_uL5_CS","locations":[{"end":53,"start":37}],"match_end":53,"match_start":37,"name":"RIBOSOMAL_L5"},{"dbname":"FUNFAM","description":"60S ribosomal protein L11","id":"G3DSA:3.30.1440.10:FF:000002","locations":[{"end":172,"start":1}],"match_end":172,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF55282","interpro_description":"Large ribosomal subunit protein uL5 domain superfamily","interpro_id":"IPR022803","interpro_name":"Ribosomal_uL5_dom_sf","locations":[{"end":171,"start":7}],"match_end":171,"match_start":7,"name":"RL5-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.1440.10","interpro_description":"Large ribosomal subunit protein uL5 domain superfamily","interpro_id":"IPR022803","interpro_name":"Ribosomal_uL5_dom_sf","locations":[{"end":174,"start":2}],"match_end":174,"match_start":2},{"dbname":"PANTHER","id":"PTHR11994","interpro_description":"Large ribosomal subunit protein uL5","interpro_id":"IPR002132","interpro_name":"Ribosomal_uL5","locations":[{"end":174,"start":3}],"match_end":174,"match_start":3,"name":"60S RIBOSOMAL PROTEIN L11-RELATED"},{"dbname":"PIRSF","id":"PIRSF002161","interpro_description":"Large ribosomal subunit protein uL5","interpro_id":"IPR002132","interpro_name":"Ribosomal_uL5","locations":[{"end":171,"start":1}],"match_end":171,"match_start":1,"name":"RPL5p_RPL5a_RPL11e_RPL5o"},{"dbname":"NCBIFAM","description":"50S ribosomal protein L5","id":"NF003258","locations":[{"end":171,"start":3}],"match_end":171,"match_start":3,"name":"PRK04219.1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3293165,"start_pos":3292641,"strand":"forward"},"name":"rpl11b","ortholog_annotations":[{"gene_uniquename":"SJAG_00465","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10301","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10301","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC26A3.07c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":4932,"ortholog_uniquename":"YGR085C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":4932,"ortholog_uniquename":"YGR085C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":4932,"ortholog_uniquename":"YGR085C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":4932,"ortholog_uniquename":"YPR102C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":4932,"ortholog_uniquename":"YPR102C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":4932,"ortholog_uniquename":"YPR102C","reference_uniquename":"PMID:26896847"}],"product":"60S ribosomal protein L11","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0019843"],"not-binding":["GO:0003735"]}},"subset_termids":["MONDO:0002280","MONDO:0005570","GO:0005829","GO:0022626","GO:0005198","GO:0042254","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0019843":null,"GO:0022625":null,"GO:0022627":null,"GO:0042254":null,"MONDO:0012938":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00465.1"],"transcripts_by_uniquename":{"SJAG_00465.1":null},"uniprot_identifier":"B6JVQ0","uniquename":"SJAG_00465"}


id: SJAG_00466
data:
  {"cv_annotations":{"biological_process":[{"annotations":[79809],"is_not":false,"summary":null,"term":"GO:0001731"}],"cellular_component":[{"annotations":[107356],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[79810],"is_not":false,"summary":null,"term":"GO:0005850"}],"molecular_function":[{"annotations":[68186],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[68187],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[107361],"is_not":false,"summary":null,"term":"GO:1990856"},{"annotations":[79811],"is_not":false,"summary":null,"term":"GO:0003743"}],"mondo":[{"annotations":[88309],"is_not":false,"summary":null,"term":"MONDO:0010258"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05452","InterPro:IPR009000","GOA:B6JVQ1","InterPro:IPR004161","InterPro:IPR009001","EnsemblGenomes-Gn:SJAG_00466","InterPro:IPR015256","InterPro:IPR027417","UniProtKB/TrEMBL:B6JVQ1","InterPro:IPR000795"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"}],"genes_by_uniquename":{"HGNC:3267":null,"SJAG_00466":null,"SPBC17G9.09":null,"YER025W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Elongation factor Tu GTP binding domain","id":"PF00009","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":226,"start":23}],"match_end":226,"match_start":23,"name":"GTP_EFTU"},{"dbname":"PFAM","description":"Initiation factor eIF2 gamma, C terminal","id":"PF09173","interpro_description":"Initiation factor eIF2 gamma, C-terminal","interpro_id":"IPR015256","interpro_name":"eIF2g_C","locations":[{"end":440,"start":351}],"match_end":440,"match_start":351,"name":"eIF2_C"},{"dbname":"PFAM","description":"Elongation factor Tu domain 2","id":"PF03144","interpro_description":"Translation elongation factor EFTu-like, domain 2","interpro_id":"IPR004161","interpro_name":"EFTu-like_2","locations":[{"end":340,"start":258}],"match_end":340,"match_start":258,"name":"GTP_EFTU_D2"},{"dbname":"CDD","description":"eIF2_gamma_III","id":"cd15490","interpro_description":"Initiation factor eIF2 gamma, C-terminal","interpro_id":"IPR015256","interpro_name":"eIF2g_C","locations":[{"end":440,"start":347}],"match_end":440,"match_start":347,"name":"eIF2_gamma_III"},{"dbname":"CDD","description":"eIF2_gamma","id":"cd01888","interpro_description":"Initiation factor eIF2 gamma, GTP-binding domain","interpro_id":"IPR044128","interpro_name":"eIF2g_GTP-bd","locations":[{"end":230,"start":24}],"match_end":230,"match_start":24,"name":"eIF2_gamma"},{"dbname":"CDD","description":"eIF2_gamma_II","id":"cd03688","interpro_description":"Initiation factor eIF2 gamma, domain 2","interpro_id":"IPR044127","interpro_name":"eIF2g_dom_2","locations":[{"end":344,"start":231}],"match_end":344,"match_start":231,"name":"eIF2_gamma_II"},{"dbname":"PROSITE_PROFILES","description":"Translational (tr)-type guanine nucleotide-binding (G) domain profile.","id":"PS51722","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":229,"start":21}],"match_end":229,"match_start":21,"name":"G_TR_2"},{"dbname":"PRINTS","description":"GTP-binding elongation factor signature","id":"PR00315","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":38,"start":25},{"end":123,"start":113},{"end":140,"start":129},{"end":176,"start":167}],"match_end":176,"match_start":25,"name":"ELONGATNFCT"},{"dbname":"FUNFAM","description":"Eukaryotic translation initiation factor 2 subunit gamma","id":"G3DSA:2.40.30.10:FF:000011","locations":[{"end":445,"start":347}],"match_end":445,"match_start":347},{"dbname":"FUNFAM","description":"Eukaryotic translation initiation factor 2 subunit gamma","id":"G3DSA:3.40.50.300:FF:000065","locations":[{"end":230,"start":21}],"match_end":230,"match_start":21},{"dbname":"FUNFAM","description":"Eukaryotic translation initiation factor 2 subunit gamma","id":"G3DSA:2.40.30.10:FF:000009","locations":[{"end":346,"start":231}],"match_end":346,"match_start":231},{"dbname":"SUPERFAMILY","id":"SSF50447","interpro_description":"Translation protein, beta-barrel domain superfamily","interpro_id":"IPR009000","interpro_name":"Transl_B-barrel_sf","locations":[{"end":344,"start":230}],"match_end":344,"match_start":230,"name":"Translation proteins"},{"dbname":"SUPERFAMILY","id":"SSF50465","interpro_description":"Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal","interpro_id":"IPR009001","interpro_name":"Transl_elong_EF1A/Init_IF2_C","locations":[{"end":440,"start":345}],"match_end":440,"match_start":345,"name":"EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":72,"start":20},{"end":234,"start":110}],"match_end":234,"match_start":20,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":230,"start":21}],"match_end":230,"match_start":21},{"dbname":"GENE3D","id":"G3DSA:2.40.30.10","locations":[{"end":446,"start":231}],"match_end":446,"match_start":231,"name":"Translation factors"},{"dbname":"PANTHER","id":"PTHR42854","interpro_description":"Eukaryotic Initiation Factor 2 Gamma Subunit","interpro_id":"IPR050543","interpro_name":"eIF2G","locations":[{"end":448,"start":4}],"match_end":448,"match_start":4,"name":"EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER"},{"dbname":"NCBIFAM","description":"translation initiation factor IF-2 subunit gamma","id":"NF003077","locations":[{"end":440,"start":20}],"match_end":440,"match_start":20,"name":"PRK04000.1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3292244,"start_pos":3290898,"strand":"forward"},"name":"tif213","ortholog_annotations":[{"gene_uniquename":"SJAG_00466","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3267","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00466","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00466","ortholog_taxonid":4932,"ortholog_uniquename":"YER025W","reference_uniquename":"PMID:29761456"}],"product":"translation initiation factor eIF2 gamma subunit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525","GO:1990856"],"not-binding":["GO:0003924","GO:0003743"]}},"subset_termids":["GO:0005829","GO:0003924","GO:0065003","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001731":null,"GO:0003743":null,"GO:0003924":null,"GO:0005525":null,"GO:0005829":null,"GO:0005850":null,"GO:1990856":null,"MONDO:0010258":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00466.1"],"transcripts_by_uniquename":{"SJAG_00466.1":null},"uniprot_identifier":"B6JVQ1","uniquename":"SJAG_00466"}


id: SJAG_00467
data:
  {"coiled_coil_coords":[{"range":{"end":153,"start":133}}],"cv_annotations":{"biological_process":[{"annotations":[107351],"is_not":false,"summary":null,"term":"GO:0016192"}],"cellular_component":[{"annotations":[107349],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107350],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[60595],"is_not":false,"summary":null,"term":"GO:0005096"},{"annotations":[107353],"is_not":false,"summary":null,"term":"GO:0005543"},{"annotations":[60597],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR001849","InterPro:IPR037278","InterPro:IPR038508","UniProtKB/TrEMBL:B6JVQ2","InterPro:IPR001164","GOA:B6JVQ2","InterPro:IPR011993","EnsemblGenomes-Gn:SJAG_00467","EnsemblGenomes-Tr:EEB05453","InterPro:IPR027267"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":453,"start":411}},{"range":{"end":694,"start":669}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"}],"genes_by_uniquename":{"HGNC:16467":null,"HGNC:16469":null,"HGNC:16754":null,"SJAG_00467":null,"SPBC17G9.08c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Putative GTPase activating protein for Arf","id":"PF01412","interpro_description":"Arf GTPase activating protein","interpro_id":"IPR001164","interpro_name":"ArfGAP_dom","locations":[{"end":576,"start":469}],"match_end":576,"match_start":469,"name":"ArfGap"},{"dbname":"PFAM","description":"BAR domain of APPL family","id":"PF16746","interpro_description":"BAR domain","interpro_id":"IPR004148","interpro_name":"BAR_dom","locations":[{"end":250,"start":36}],"match_end":250,"match_start":36,"name":"BAR_3"},{"dbname":"PFAM","description":"PH domain","id":"PF00169","interpro_description":"Pleckstrin homology domain","interpro_id":"IPR001849","interpro_name":"PH_domain","locations":[{"end":396,"start":297}],"match_end":396,"match_start":297,"name":"PH"},{"dbname":"CDD","description":"ArfGap","id":"cd08204","locations":[{"end":569,"start":470}],"match_end":569,"match_start":470,"name":"ArfGap"},{"dbname":"CDD","description":"BAR_ArfGAP_fungi","id":"cd07608","locations":[{"end":238,"start":43}],"match_end":238,"match_start":43,"name":"BAR_ArfGAP_fungi"},{"dbname":"PROSITE_PROFILES","description":"ARF GTPase-activating proteins domain profile.","id":"PS50115","interpro_description":"Arf GTPase activating protein","interpro_id":"IPR001164","interpro_name":"ArfGAP_dom","locations":[{"end":582,"start":459}],"match_end":582,"match_start":459,"name":"ARFGAP"},{"dbname":"PROSITE_PROFILES","description":"PH domain profile.","id":"PS50003","interpro_description":"Pleckstrin homology domain","interpro_id":"IPR001849","interpro_name":"PH_domain","locations":[{"end":397,"start":293}],"match_end":397,"match_start":293,"name":"PH_DOMAIN"},{"dbname":"SMART","id":"SM00105","interpro_description":"Arf GTPase activating protein","interpro_id":"IPR001164","interpro_name":"ArfGAP_dom","locations":[{"end":582,"start":448}],"match_end":582,"match_start":448,"name":"arf_gap_3"},{"dbname":"SMART","id":"SM00233","interpro_description":"Pleckstrin homology domain","interpro_id":"IPR001849","interpro_name":"PH_domain","locations":[{"end":399,"start":294}],"match_end":399,"match_start":294,"name":"PH_update"},{"dbname":"PRINTS","description":"HIV Rev interacting protein signature","id":"PR00405","interpro_description":"Arf GTPase activating protein","interpro_id":"IPR001164","interpro_name":"ArfGAP_dom","locations":[{"end":509,"start":492},{"end":534,"start":513}],"match_end":534,"match_start":492,"name":"REVINTRACTNG"},{"dbname":"FUNFAM","description":"stromal membrane-associated protein 1 isoform X1","id":"G3DSA:1.10.220.150:FF:000009","locations":[{"end":579,"start":444}],"match_end":579,"match_start":444},{"dbname":"FUNFAM","description":"ARF GTPase activator (Csx2)","id":"G3DSA:2.30.29.30:FF:000252","locations":[{"end":403,"start":286}],"match_end":403,"match_start":286},{"dbname":"SUPERFAMILY","id":"SSF57863","interpro_description":"ARFGAP/RecO-like zinc finger","interpro_id":"IPR037278","interpro_name":"ARFGAP/RecO","locations":[{"end":577,"start":469}],"match_end":577,"match_start":469,"name":"ArfGap/RecO-like zinc finger"},{"dbname":"SUPERFAMILY","id":"SSF103657","interpro_description":"AH/BAR domain superfamily","interpro_id":"IPR027267","interpro_name":"AH/BAR_dom_sf","locations":[{"end":263,"start":36},{"end":306,"start":291}],"match_end":306,"match_start":36,"name":"BAR/IMD domain-like"},{"dbname":"SUPERFAMILY","id":"SSF50729","locations":[{"end":397,"start":293}],"match_end":397,"match_start":293,"name":"PH domain-like"},{"dbname":"GENE3D","id":"G3DSA:2.30.29.30","interpro_description":"PH-like domain superfamily","interpro_id":"IPR011993","interpro_name":"PH-like_dom_sf","locations":[{"end":403,"start":282}],"match_end":403,"match_start":282},{"dbname":"GENE3D","id":"G3DSA:1.20.1270.60","interpro_description":"AH/BAR domain superfamily","interpro_id":"IPR027267","interpro_name":"AH/BAR_dom_sf","locations":[{"end":271,"start":34}],"match_end":271,"match_start":34,"name":"Arfaptin homology (AH) domain/BAR domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.220.150","interpro_description":"ArfGAP domain superfamily","interpro_id":"IPR038508","interpro_name":"ArfGAP_dom_sf","locations":[{"end":579,"start":443}],"match_end":579,"match_start":443,"name":"Arf GTPase activating protein"},{"dbname":"PANTHER","id":"PTHR23180","interpro_description":"ArfGAP ACAP1/2/3-like","interpro_id":"IPR045258","interpro_name":"ACAP1/2/3-like","locations":[{"end":607,"start":35}],"match_end":607,"match_start":35,"name":"CENTAURIN/ARF"},{"dbname":"COILS","id":"Coil","locations":[{"end":153,"start":133}],"match_end":153,"match_start":133,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":453,"start":411},{"end":694,"start":669}],"match_end":694,"match_start":411,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":432,"start":421}],"match_end":432,"match_start":421,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":420,"start":411},{"end":685,"start":669}],"match_end":685,"match_start":411,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3289461,"start_pos":3287377,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":276,"start":258}},{"range":{"end":400,"start":389}},{"range":{"end":432,"start":420}},{"range":{"end":465,"start":448}}],"name":"cnt5","ortholog_annotations":[{"gene_uniquename":"SJAG_00467","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16467","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00467","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16469","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00467","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16754","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00467","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.08c","reference_uniquename":"PMID:21511999"}],"product":"centaurin Cnt5","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270","GO:0005543"],"not-binding":["GO:0005096"]}},"subset_termids":["GO:0016192","GO:0098772","GO:0008289","GO:0005829","GO:0005886","GO:0030234"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005096":null,"GO:0005543":null,"GO:0005829":null,"GO:0005886":null,"GO:0008270":null,"GO:0016192":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00467.1"],"transcripts_by_uniquename":{"SJAG_00467.1":null},"uniprot_identifier":"B6JVQ2","uniquename":"SJAG_00467"}


id: SJAG_00468
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107344],"is_not":false,"summary":null,"term":"GO:0002182"},{"annotations":[63393],"is_not":false,"summary":null,"term":"GO:0000462"}],"cellular_component":[{"annotations":[76341],"is_not":false,"summary":null,"term":"GO:0022627"},{"annotations":[107342],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[76342],"is_not":false,"summary":null,"term":"GO:0003735"}],"mondo":[{"annotations":[87685],"is_not":false,"summary":null,"term":"MONDO:0012529"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVQ3","EnsemblGenomes-Gn:SJAG_00468","InterPro:IPR018098","EnsemblGenomes-Tr:EEB05454","GOA:B6JVQ3","InterPro:IPR001976","InterPro:IPR012678"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":132,"start":96}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"}],"genes_by_uniquename":{"HGNC:10411":null,"SJAG_00468":null,"SPAC17G6.06":null,"SPBC17G9.07":null,"YER074W":null,"YIL069C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein S24e","id":"PF01282","interpro_description":"Small ribosomal subunit protein eS24","interpro_id":"IPR001976","interpro_name":"Ribosomal_eS24","locations":[{"end":101,"start":24}],"match_end":101,"match_start":24,"name":"Ribosomal_S24e"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein S24e signature.","id":"PS00529","interpro_description":"Small ribosomal subunit protein eS24 conserved site","interpro_id":"IPR018098","interpro_name":"Ribosomal_eS24_CS","locations":[{"end":86,"start":64}],"match_end":86,"match_start":64,"name":"RIBOSOMAL_S24E"},{"dbname":"FUNFAM","description":"40S ribosomal protein S24","id":"G3DSA:3.30.70.3370:FF:000001","locations":[{"end":131,"start":1}],"match_end":131,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF54189","interpro_description":"Ribosomal protein uL23/eL15/eS24 core domain superfamily","interpro_id":"IPR012678","interpro_name":"Ribosomal_uL23/eL15/eS24_sf","locations":[{"end":105,"start":5}],"match_end":105,"match_start":5,"name":"Ribosomal proteins S24e, L23 and L15e"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.3370","interpro_description":"Eukaryotic Ribosomal Protein eS24","interpro_id":"IPR053709","interpro_name":"eRP_eS24_sf","locations":[{"end":132,"start":1}],"match_end":132,"match_start":1},{"dbname":"PANTHER","id":"PTHR10496","interpro_description":"Small ribosomal subunit protein eS24","interpro_id":"IPR001976","interpro_name":"Ribosomal_eS24","locations":[{"end":127,"start":1}],"match_end":127,"match_start":1,"name":"40S RIBOSOMAL PROTEIN S24"},{"dbname":"HAMAP","description":"Small ribosomal subunit protein eS24 [rps24e].","id":"MF_00545","interpro_description":"Small ribosomal subunit protein eS24","interpro_id":"IPR001976","interpro_name":"Ribosomal_eS24","locations":[{"end":105,"start":3}],"match_end":105,"match_start":3,"name":"Ribosomal_S24e"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":132,"start":96}],"match_end":132,"match_start":96,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":117,"start":105}],"match_end":117,"match_start":105,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3286852,"start_pos":3286397,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":116,"start":104}}],"name":"rps24b","ortholog_annotations":[{"gene_uniquename":"SJAG_00468","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10411","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00468","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10411","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00468","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17G6.06","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00468","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00468","ortholog_taxonid":4932,"ortholog_uniquename":"YER074W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00468","ortholog_taxonid":4932,"ortholog_uniquename":"YER074W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00468","ortholog_taxonid":4932,"ortholog_uniquename":"YIL069C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00468","ortholog_taxonid":4932,"ortholog_uniquename":"YIL069C","reference_uniquename":"PMID:29761456"}],"product":"40S ribosomal protein S24","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0022626","GO:0005634","GO:0005730","MONDO:0005570","GO:0042254","GO:0002181","GO:0005829","MONDO:0002280"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000462":null,"GO:0002182":null,"GO:0003735":null,"GO:0005730":null,"GO:0022627":null,"MONDO:0012529":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00468.1"],"transcripts_by_uniquename":{"SJAG_00468.1":null},"uniprot_identifier":"B6JVQ3","uniquename":"SJAG_00468"}


id: SJAG_00469
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107335],"is_not":false,"summary":null,"term":"GO:0031169"}],"cellular_component":[{"annotations":[107333],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107334],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[75427],"is_not":false,"summary":null,"term":"GO:0016410"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVQ4","EnsemblGenomes-Tr:EEB05455","InterPro:IPR016181","InterPro:IPR019432","EnsemblGenomes-Gn:SJAG_00469"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"}],"genes_by_uniquename":{"SJAG_00469":null,"SPBC17G9.06c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Acetyltransferase (GNAT) domain","id":"PF13523","locations":[{"end":306,"start":160}],"match_end":306,"match_start":160,"name":"Acetyltransf_8"},{"dbname":"SMART","id":"SM01006","interpro_description":"Acyltransferase MbtK/IucB-like, conserved domain","interpro_id":"IPR019432","interpro_name":"Acyltransferase_MbtK/IucB-like","locations":[{"end":204,"start":157}],"match_end":204,"match_start":157,"name":"AlcB_2"},{"dbname":"FUNFAM","description":"Putative lysine N-acyltransferase C17G9.06c","id":"G3DSA:3.40.630.30:FF:000256","locations":[{"end":320,"start":123}],"match_end":320,"match_start":123},{"dbname":"SUPERFAMILY","id":"SSF55729","interpro_description":"Acyl-CoA N-acyltransferase","interpro_id":"IPR016181","interpro_name":"Acyl_CoA_acyltransferase","locations":[{"end":318,"start":130}],"match_end":318,"match_start":130,"name":"Acyl-CoA N-acyltransferases (Nat)"},{"dbname":"GENE3D","id":"G3DSA:3.40.630.30","locations":[{"end":320,"start":124}],"match_end":320,"match_start":124},{"dbname":"PANTHER","id":"PTHR31438","locations":[{"end":327,"start":40}],"match_end":327,"match_start":40,"name":"LYSINE N-ACYLTRANSFERASE C17G9.06C-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3285192,"start_pos":3284191,"strand":"reverse"},"name":"sib3","ortholog_annotations":[{"gene_uniquename":"SJAG_00469","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.06c","reference_uniquename":"PMID:21511999"}],"product":"siderophore-iron biosynthesis protein Sib3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016410"]}},"subset_termids":["GO:0019748","GO:0005829","GO:0016746","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0016410":null,"GO:0031169":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00469.1"],"transcripts_by_uniquename":{"SJAG_00469.1":null},"uniprot_identifier":"B6JVQ4","uniquename":"SJAG_00469"}


id: SJAG_00470
data:
  {"coiled_coil_coords":[{"range":{"end":231,"start":211}}],"cv_annotations":{"biological_process":[{"annotations":[107330],"is_not":false,"summary":null,"term":"GO:0006357"}],"cellular_component":[{"annotations":[107328],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[77364],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[64822],"is_not":false,"summary":null,"term":"GO:0003755"},{"annotations":[64823],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05456","GOA:B6JVQ5","InterPro:IPR012677","EnsemblGenomes-Gn:SJAG_00470","InterPro:IPR002130","InterPro:IPR035538","InterPro:IPR035542","InterPro:IPR000504","InterPro:IPR035979","UniProtKB/TrEMBL:B6JVQ5","InterPro:IPR029000"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":416,"start":332}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"}],"genes_by_uniquename":{"HGNC:15702":null,"SJAG_00470":null,"SPBC17G9.05":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD","id":"PF00160","interpro_description":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain","interpro_id":"IPR002130","interpro_name":"Cyclophilin-type_PPIase_dom","locations":[{"end":167,"start":3}],"match_end":167,"match_start":3,"name":"Pro_isomerase"},{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":318,"start":248}],"match_end":318,"match_start":248,"name":"RRM_1"},{"dbname":"CDD","description":"RRM_PPIL4","id":"cd12235","locations":[{"end":325,"start":243}],"match_end":325,"match_start":243,"name":"RRM_PPIL4"},{"dbname":"CDD","description":"cyclophilin_RRM","id":"cd01921","interpro_description":"PPIL4-like, cyclophilin domain","interpro_id":"IPR035538","interpro_name":"Cyclophilin_PPIL4","locations":[{"end":177,"start":4}],"match_end":177,"match_start":4,"name":"cyclophilin_RRM"},{"dbname":"PROSITE_PROFILES","description":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.","id":"PS50072","interpro_description":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain","interpro_id":"IPR002130","interpro_name":"Cyclophilin-type_PPIase_dom","locations":[{"end":169,"start":6}],"match_end":169,"match_start":6,"name":"CSA_PPIASE_2"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":324,"start":246}],"match_end":324,"match_start":246,"name":"RRM"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":320,"start":247}],"match_end":320,"match_start":247,"name":"rrm1_1"},{"dbname":"PRINTS","description":"Cyclophilin peptidyl-prolyl cis-trans isomerase signature","id":"PR00153","interpro_description":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain","interpro_id":"IPR002130","interpro_name":"Cyclophilin-type_PPIase_dom","locations":[{"end":31,"start":16},{"end":54,"start":42},{"end":144,"start":129}],"match_end":144,"match_start":16,"name":"CSAPPISMRASE"},{"dbname":"FUNFAM","description":"Peptidyl-prolyl cis-trans isomerase","id":"G3DSA:3.30.70.330:FF:000287","locations":[{"end":329,"start":184}],"match_end":329,"match_start":184},{"dbname":"SUPERFAMILY","id":"SSF50891","interpro_description":"Cyclophilin-like domain superfamily","interpro_id":"IPR029000","interpro_name":"Cyclophilin-like_dom_sf","locations":[{"end":190,"start":1}],"match_end":190,"match_start":1,"name":"Cyclophilin-like"},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":350,"start":229}],"match_end":350,"match_start":229,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":331,"start":198}],"match_end":331,"match_start":198},{"dbname":"GENE3D","id":"G3DSA:2.40.100.10","interpro_description":"Cyclophilin-like domain superfamily","interpro_id":"IPR029000","interpro_name":"Cyclophilin-like_dom_sf","locations":[{"end":182,"start":1}],"match_end":182,"match_start":1},{"dbname":"PANTHER","id":"PTHR45843","interpro_description":"Cyclophilin-RNA interacting protein","interpro_id":"IPR035542","interpro_name":"CRIP","locations":[{"end":408,"start":1}],"match_end":408,"match_start":1,"name":"PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4"},{"dbname":"COILS","id":"Coil","locations":[{"end":231,"start":211}],"match_end":231,"match_start":211,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":416,"start":332}],"match_end":416,"match_start":332,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":352,"start":332},{"end":416,"start":399}],"match_end":416,"match_start":332,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":362,"start":353},{"end":398,"start":388}],"match_end":398,"match_start":353,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3284118,"start_pos":3282868,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":230,"start":215}},{"range":{"end":374,"start":353}},{"range":{"end":397,"start":381}},{"range":{"end":415,"start":405}}],"name":"rct1","ortholog_annotations":[{"gene_uniquename":"SJAG_00470","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15702","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00470","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.05","reference_uniquename":"PMID:21511999"}],"product":"cyclophilin family peptidyl-prolyl cis-trans isomerase, RRM-containing Rct1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0003755"]}},"subset_termids":["GO:0140096","GO:0006351","GO:0005634","GO:0005694","GO:0016853","GO:0006355"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003723":null,"GO:0003755":null,"GO:0005634":null,"GO:0006357":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00470.1"],"transcripts_by_uniquename":{"SJAG_00470.1":null},"uniprot_identifier":"B6JVQ5","uniquename":"SJAG_00470"}


id: SJAG_00471
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74573],"is_not":false,"summary":null,"term":"GO:0006406"},{"annotations":[74574],"is_not":false,"summary":null,"term":"GO:0006606"},{"annotations":[107325],"is_not":false,"summary":null,"term":"GO:0000054"}],"cellular_component":[{"annotations":[107313],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107314],"is_not":false,"summary":null,"term":"GO:0000791"},{"annotations":[107315],"is_not":false,"summary":null,"term":"GO:0000792"},{"annotations":[60932],"is_not":false,"summary":null,"term":"GO:0031965"},{"annotations":[107317],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[121181],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[74572],"is_not":false,"summary":null,"term":"GO:0031080"},{"annotations":[107320],"is_not":false,"summary":null,"term":"GO:0140602"},{"annotations":[107322],"is_not":true,"summary":null,"term":"GO:0044732"}],"molecular_function":[{"annotations":[107326],"is_not":false,"summary":null,"term":"GO:1990188"},{"annotations":[74571],"is_not":false,"summary":null,"term":"GO:0017056"}],"mondo":[{"annotations":[88221],"is_not":false,"summary":null,"term":"MONDO:0032580"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00471","EnsemblGenomes-Tr:EEB05457","UniProtKB/TrEMBL:B6JVQ6","GOA:B6JVQ6","InterPro:IPR011502"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:28954740","source":"canto"},{"reference_uniquename":"PMID:21802294","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"}],"genes_by_uniquename":{"HGNC:8734":null,"SJAG_00471":null,"SJAG_04464":null,"SPBC17G9.04c":null,"YJR042W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nup85 Nucleoporin","id":"PF07575","interpro_description":"Nucleoporin Nup85-like","interpro_id":"IPR011502","interpro_name":"Nucleoporin_Nup85","locations":[{"end":642,"start":76}],"match_end":642,"match_start":76,"name":"Nucleopor_Nup85"},{"dbname":"PANTHER","id":"PTHR13373","interpro_description":"Nucleoporin Nup85-like","interpro_id":"IPR011502","interpro_name":"Nucleoporin_Nup85","locations":[{"end":660,"start":30}],"match_end":660,"match_start":30,"name":"FROUNT PROTEIN-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3282346,"start_pos":3280328,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":543,"start":530}}],"name":"nup85","ortholog_annotations":[{"gene_uniquename":"SJAG_00471","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8734","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00471","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00471","ortholog_taxonid":4932,"ortholog_uniquename":"YJR042W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00471","ortholog_taxonid":4932,"ortholog_uniquename":"YJR042W","reference_uniquename":"PMID:26896847"}],"physical_interactions":[{"annotation_date":"2022-11-23","evidence":"Affinity Capture-Western","gene_uniquename":"SJAG_04464","interactor_uniquename":"SJAG_00471","reference_uniquename":"PMID:28954740","source_database":"JaponicusDB","throughput":"low"}],"product":"nucleoporin Nup85","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:21802294":null,"PMID:26896847":null,"PMID:28954740":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:1990188"],"not-binding":["GO:0017056"]}},"subset_termids":["GO:0042254","GO:0005198","GO:0005643","GO:0005694","GO:0006913","GO:0005634","GO:0005829","MONDO:0005240","GO:0034399"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000054":null,"GO:0000791":null,"GO:0000792":null,"GO:0005643":null,"GO:0005829":null,"GO:0006406":null,"GO:0006606":null,"GO:0017056":null,"GO:0031080":null,"GO:0031965":null,"GO:0034399":null,"GO:0044732":null,"GO:0140602":null,"GO:1990188":null,"MONDO:0032580":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00471.1"],"transcripts_by_uniquename":{"SJAG_00471.1":null},"uniprot_identifier":"B6JVQ6","uniquename":"SJAG_00471"}


id: SJAG_00472
data:
  {"coiled_coil_coords":[{"range":{"end":753,"start":733}}],"cv_annotations":{"biological_process":[{"annotations":[108794],"is_not":false,"summary":null,"term":"GO:0010619"},{"annotations":[108795],"is_not":false,"summary":null,"term":"GO:0010515"}],"cellular_component":[{"annotations":[108789],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[108791],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[108792],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[108793],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05458","InterPro:IPR014772","EnsemblGenomes-Gn:SJAG_00472","UniProtKB/TrEMBL:B6JVQ7","InterPro:IPR014770"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"}],"genes_by_uniquename":{"SJAG_00472":null,"SPBC21C3.20c":null,"YOR296W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PROSITE_PROFILES","description":"Munc13-homology domain 2 (MHD2) profile.","id":"PS51259","interpro_description":"Mammalian uncoordinated homology 13, domain 2","interpro_id":"IPR014772","interpro_name":"Munc13_dom-2","locations":[{"end":1061,"start":946}],"match_end":1061,"match_start":946,"name":"MHD2"},{"dbname":"PANTHER","id":"PTHR47263","interpro_description":"Glucose-responsive signaling protein","interpro_id":"IPR052811","interpro_name":"Glucose_resp_signaling","locations":[{"end":1060,"start":3}],"match_end":1060,"match_start":3,"name":"ADENYLATE CYCLASE ACTIVATION PROTEIN GIT1"},{"dbname":"COILS","id":"Coil","locations":[{"end":753,"start":733}],"match_end":753,"match_start":733,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3280144,"start_pos":3276835,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":200,"start":186}}],"name":"git1","ortholog_annotations":[{"gene_uniquename":"SJAG_00472","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.20c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00472","ortholog_taxonid":4932,"ortholog_uniquename":"YOR296W","reference_uniquename":"PMID:26896847"}],"product":"C2 domain protein Git1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null},"split_by_parent_groups":{},"subset_termids":["GO:0000747","GO:0023052","GO:0015630","GO:0005634","GO:0005816","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0010515":null,"GO:0010619":null,"GO:0032153":null,"GO:0044732":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00472.1"],"transcripts_by_uniquename":{"SJAG_00472.1":null},"uniprot_identifier":"B6JVQ7","uniquename":"SJAG_00472"}


id: SJAG_00473
data:
  {"cv_annotations":{"molecular_function":[{"annotations":[69371],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["GOA:B6JVQ8","EnsemblGenomes-Gn:SJAG_00473","EnsemblGenomes-Tr:EEB05459","UniProtKB/TrEMBL:B6JVQ8","InterPro:IPR014720"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"}],"genes_by_uniquename":{"SJAG_00473":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Double-stranded RNA binding motif","id":"PF00035","interpro_description":"Double-stranded RNA-binding domain","interpro_id":"IPR014720","interpro_name":"dsRBD_dom","locations":[{"end":77,"start":14}],"match_end":77,"match_start":14,"name":"dsrm"},{"dbname":"PROSITE_PROFILES","description":"Double stranded RNA-binding domain (dsRBD) profile.","id":"PS50137","interpro_description":"Double-stranded RNA-binding domain","interpro_id":"IPR014720","interpro_name":"dsRBD_dom","locations":[{"end":80,"start":13}],"match_end":80,"match_start":13,"name":"DS_RBD"},{"dbname":"SMART","id":"SM00358","interpro_description":"Double-stranded RNA-binding domain","interpro_id":"IPR014720","interpro_name":"dsRBD_dom","locations":[{"end":79,"start":14}],"match_end":79,"match_start":14,"name":"DRBM_3"},{"dbname":"SUPERFAMILY","id":"SSF54768","locations":[{"end":91,"start":10}],"match_end":91,"match_start":10,"name":"dsRNA-binding domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.160.20","locations":[{"end":86,"start":8}],"match_end":86,"match_start":8}],"location":{"chromosome_name":"supercont5.1","end_pos":3276417,"start_pos":3275555,"strand":"reverse"},"product":"Ribonuclease III, endonuclease domain superfamily","references_by_uniquename":{"GO_REF:0000104":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00473.1"],"transcripts_by_uniquename":{"SJAG_00473.1":null},"uniprot_identifier":"B6JVQ8","uniquename":"SJAG_00473"}


id: SJAG_00474
data:
  {"cv_annotations":{"biological_process":[{"annotations":[79084],"is_not":false,"summary":null,"term":"GO:0006376"}],"cellular_component":[{"annotations":[108887],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[79083],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[108889],"is_not":false,"summary":null,"term":"GO:0005685"},{"annotations":[108890],"is_not":false,"summary":null,"term":"GO:0071004"}],"molecular_function":[{"annotations":[79085],"is_not":false,"summary":null,"term":"GO:0003729"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00474","EnsemblGenomes-Tr:EEB05460","InterPro:IPR000504","InterPro:IPR035979","UniProtKB/TrEMBL:B6JVQ9","InterPro:IPR012677","GOA:B6JVQ9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":76,"start":26}},{"range":{"end":476,"start":437}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"}],"genes_by_uniquename":{"HGNC:30813":null,"SJAG_00474":null,"SPBC23E6.01c":null,"YBR212W":null,"YHR086W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":166,"start":100},{"end":263,"start":193},{"end":374,"start":310}],"match_end":374,"match_start":100,"name":"RRM_1"},{"dbname":"CDD","description":"RRM1_NGR1_NAM8_like","id":"cd12611","locations":[{"end":178,"start":99}],"match_end":178,"match_start":99,"name":"RRM1_NGR1_NAM8_like"},{"dbname":"CDD","description":"RRM3_NGR1_NAM8_like","id":"cd12346","locations":[{"end":378,"start":307}],"match_end":378,"match_start":307,"name":"RRM3_NGR1_NAM8_like"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":177,"start":98},{"end":270,"start":191},{"end":380,"start":308}],"match_end":380,"match_start":98,"name":"RRM"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":173,"start":99},{"end":266,"start":192},{"end":376,"start":309}],"match_end":376,"match_start":99,"name":"rrm1_1"},{"dbname":"FUNFAM","description":"mRNA binding post-transcriptional regulator","id":"G3DSA:3.30.70.330:FF:000227","locations":[{"end":284,"start":180}],"match_end":284,"match_start":180},{"dbname":"FUNFAM","description":"tRNA selenocysteine 1-associated protein 1","id":"G3DSA:3.30.70.330:FF:000159","locations":[{"end":176,"start":97}],"match_end":176,"match_start":97},{"dbname":"FUNFAM","description":"mRNA binding post-transcriptional regulator","id":"G3DSA:3.30.70.330:FF:000065","locations":[{"end":385,"start":295}],"match_end":385,"match_start":295},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":274,"start":97},{"end":384,"start":293}],"match_end":384,"match_start":97,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":176,"start":97},{"end":279,"start":180},{"end":384,"start":295}],"match_end":384,"match_start":97},{"dbname":"PANTHER","id":"PTHR47640","interpro_description":"RNA-binding protein 42/Polyadenylate-binding protein RBP45/47-like","interpro_id":"IPR050825","interpro_name":"RBM42_RBP45_47-like","locations":[{"end":382,"start":91}],"match_end":382,"match_start":91,"name":"TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":76,"start":26},{"end":476,"start":437}],"match_end":476,"match_start":26,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":76,"start":66}],"match_end":76,"match_start":66,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":35,"start":26},{"end":65,"start":45}],"match_end":65,"match_start":26,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3275257,"start_pos":3273827,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":75,"start":65}},{"range":{"end":471,"start":458}}],"name":"cxr1","ortholog_annotations":[{"gene_uniquename":"SJAG_00474","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30813","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00474","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC23E6.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00474","ortholog_taxonid":4932,"ortholog_uniquename":"YBR212W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00474","ortholog_taxonid":4932,"ortholog_uniquename":"YHR086W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00474","ortholog_taxonid":4932,"ortholog_uniquename":"YHR086W","reference_uniquename":"PMID:26896847"}],"product":"splicing factor, RNA-binding Cxr1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003729"]}},"subset_termids":["GO:0016071","GO:0005829","GO:0065003","GO:0010494","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003729":null,"GO:0005685":null,"GO:0005829":null,"GO:0006376":null,"GO:0010494":null,"GO:0071004":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00474.1"],"transcripts_by_uniquename":{"SJAG_00474.1":null},"uniprot_identifier":"B6JVQ9","uniquename":"SJAG_00474"}


id: SJAG_00475
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76017],"is_not":false,"summary":null,"term":"GO:0000724"},{"annotations":[108898],"is_not":false,"summary":null,"term":"GO:0032435"}],"cellular_component":[{"annotations":[108893],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[76020],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[76019],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[62920],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[62923],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[108901],"is_not":false,"summary":null,"term":"GO:0061995"},{"annotations":[108902],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[62922],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05461","InterPro:IPR017907","InterPro:IPR027370","InterPro:IPR001650","UniProtKB/TrEMBL:B6JVR0","InterPro:IPR001841","InterPro:IPR013083","EnsemblGenomes-Gn:SJAG_00475","GOA:B6JVR0","InterPro:IPR014001","InterPro:IPR000330","InterPro:IPR027417","InterPro:IPR038718"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":60,"start":1}},{"range":{"end":176,"start":114}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"}],"genes_by_uniquename":{"HGNC:11099":null,"SJAG_00475":null,"SPBC23E6.02":null,"YOR191W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RING-type zinc-finger","id":"PF13445","interpro_description":"Zinc finger, RING-type, eukaryotic","interpro_id":"IPR027370","interpro_name":"Znf-RING_euk","locations":[{"end":814,"start":784}],"match_end":814,"match_start":784,"name":"zf-RING_UBOX"},{"dbname":"PFAM","description":"SNF2-related domain","id":"PF00176","interpro_description":"SNF2, N-terminal","interpro_id":"IPR000330","interpro_name":"SNF2_N","locations":[{"end":741,"start":429}],"match_end":741,"match_start":429,"name":"SNF2-rel_dom"},{"dbname":"PFAM","description":"Helicase conserved C-terminal domain","id":"PF00271","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":1017,"start":906}],"match_end":1017,"match_start":906,"name":"Helicase_C"},{"dbname":"CDD","description":"RING-HC","id":"cd16449","locations":[{"end":834,"start":784}],"match_end":834,"match_start":784,"name":"RING-HC"},{"dbname":"CDD","description":"SF2_C_SNF","id":"cd18793","interpro_description":"SNF2/RAD5-like, C-terminal helicase domain","interpro_id":"IPR049730","interpro_name":"SNF2/RAD54-like_C","locations":[{"end":1028,"start":899}],"match_end":1028,"match_start":899,"name":"SF2_C_SNF"},{"dbname":"CDD","description":"DEXDc_SHPRH-like","id":"cd18008","locations":[{"end":666,"start":426}],"match_end":666,"match_start":426,"name":"DEXDc_SHPRH-like"},{"dbname":"PROSITE_PATTERNS","description":"Zinc finger RING-type signature.","id":"PS00518","interpro_description":"Zinc finger, RING-type, conserved site","interpro_id":"IPR017907","interpro_name":"Znf_RING_CS","locations":[{"end":809,"start":800}],"match_end":809,"match_start":800,"name":"ZF_RING_1"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.","id":"PS51192","interpro_description":"Helicase superfamily 1/2, ATP-binding domain","interpro_id":"IPR014001","interpro_name":"Helicase_ATP-bd","locations":[{"end":624,"start":439}],"match_end":624,"match_start":439,"name":"HELICASE_ATP_BIND_1"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger RING-type profile.","id":"PS50089","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":834,"start":784}],"match_end":834,"match_start":784,"name":"ZF_RING_2"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase C-terminal domain profile.","id":"PS51194","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":1069,"start":903}],"match_end":1069,"match_start":903,"name":"HELICASE_CTER"},{"dbname":"SMART","id":"SM00487","interpro_description":"Helicase superfamily 1/2, ATP-binding domain","interpro_id":"IPR014001","interpro_name":"Helicase_ATP-bd","locations":[{"end":632,"start":422}],"match_end":632,"match_start":422,"name":"ultradead3"},{"dbname":"SMART","id":"SM00490","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":1017,"start":934}],"match_end":1017,"match_start":934,"name":"helicmild6"},{"dbname":"SUPERFAMILY","id":"SSF57850","locations":[{"end":841,"start":780}],"match_end":841,"match_start":780,"name":"RING/U-box"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":666,"start":396},{"end":770,"start":675},{"end":1077,"start":894}],"match_end":1077,"match_start":396,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":852,"start":766}],"match_end":852,"match_start":766,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.10810","interpro_description":"SNF2-like, N-terminal domain superfamily","interpro_id":"IPR038718","interpro_name":"SNF2-like_sf","locations":[{"end":679,"start":408}],"match_end":679,"match_start":408},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":756,"start":681},{"end":1079,"start":893}],"match_end":1079,"match_start":681},{"dbname":"PANTHER","id":"PTHR45626","interpro_description":"SNF2/RAD54 Helicase and Transcription Factor","interpro_id":"IPR050628","interpro_name":"SNF2_RAD54_helicase_TF","locations":[{"end":1073,"start":148}],"match_end":1073,"match_start":148,"name":"TRANSCRIPTION TERMINATION FACTOR 2-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":60,"start":1},{"end":176,"start":114}],"match_end":176,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":134,"start":124}],"match_end":134,"match_start":124,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":31,"start":11}],"match_end":31,"match_start":11,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":48,"start":34},{"end":168,"start":151}],"match_end":168,"match_start":34,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3271862,"start_pos":3268558,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":133,"start":123}}],"name":"rrp2","ortholog_annotations":[{"gene_uniquename":"SJAG_00475","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11099","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00475","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC23E6.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00475","ortholog_taxonid":4932,"ortholog_uniquename":"YOR191W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00475","ortholog_taxonid":4932,"ortholog_uniquename":"YOR191W","reference_uniquename":"PMID:26896847"}],"product":"DNA translocase/ SUMO-targeted ubiquitin ligase E3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0008270"],"not-binding":["GO:0016887","GO:0061630","GO:0061995"]}},"subset_termids":["GO:0019787","GO:0006310","GO:0030163","GO:0140097","GO:0016887","GO:0005634","GO:0005694","GO:0140096","GO:0016746","GO:0006281"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000724":null,"GO:0000785":null,"GO:0005524":null,"GO:0005634":null,"GO:0005737":null,"GO:0008270":null,"GO:0016887":null,"GO:0032435":null,"GO:0061630":null,"GO:0061995":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00475.1"],"transcripts_by_uniquename":{"SJAG_00475.1":null},"uniprot_identifier":"B6JVR0","uniquename":"SJAG_00475"}


id: SJAG_00476
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108908],"is_not":false,"summary":null,"term":"GO:0035694"}],"cellular_component":[{"annotations":[108905],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[108906],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[108907],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[80727],"is_not":false,"summary":null,"term":"GO:0008418"},{"annotations":[80726],"is_not":false,"summary":null,"term":"GO:0070773"}]},"dbxrefs":["InterPro:IPR036526","InterPro:IPR039703","InterPro:IPR003010","UniProtKB/TrEMBL:B6JVR1","EnsemblGenomes-Gn:SJAG_00476","GOA:B6JVR1","EnsemblGenomes-Tr:EEB05462"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"}],"genes_by_uniquename":{"SJAG_00476":null,"SPBC23E6.03c":null,"YJR062C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Carbon-nitrogen hydrolase","id":"PF00795","interpro_description":"Carbon-nitrogen hydrolase","interpro_id":"IPR003010","interpro_name":"C-N_Hydrolase","locations":[{"end":158,"start":2}],"match_end":158,"match_start":2,"name":"CN_hydrolase"},{"dbname":"PROSITE_PROFILES","description":"Carbon-nitrogen hydrolase domain profile.","id":"PS50263","interpro_description":"Carbon-nitrogen hydrolase","interpro_id":"IPR003010","interpro_name":"C-N_Hydrolase","locations":[{"end":280,"start":1}],"match_end":280,"match_start":1,"name":"CN_HYDROLASE"},{"dbname":"SUPERFAMILY","id":"SSF56317","interpro_description":"Carbon-nitrogen hydrolase superfamily","interpro_id":"IPR036526","interpro_name":"C-N_Hydrolase_sf","locations":[{"end":278,"start":1}],"match_end":278,"match_start":1,"name":"Carbon-nitrogen hydrolase"},{"dbname":"GENE3D","id":"G3DSA:3.60.110.10","interpro_description":"Carbon-nitrogen hydrolase superfamily","interpro_id":"IPR036526","interpro_name":"C-N_Hydrolase_sf","locations":[{"end":280,"start":1}],"match_end":280,"match_start":1},{"dbname":"PANTHER","id":"PTHR11750","interpro_description":"Protein N-terminal amidase","interpro_id":"IPR039703","interpro_name":"Nta1","locations":[{"end":279,"start":1}],"match_end":279,"match_start":1,"name":"PROTEIN N-TERMINAL AMIDASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":3268439,"start_pos":3267545,"strand":"forward"},"name":"nta1","ortholog_annotations":[{"gene_uniquename":"SJAG_00476","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC23E6.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00476","ortholog_taxonid":4932,"ortholog_uniquename":"YJR062C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00476","ortholog_taxonid":4932,"ortholog_uniquename":"YJR062C","reference_uniquename":"PMID:26896847"}],"product":"protein N-terminal amidase Nta1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008418","GO:0070773"]}},"subset_termids":["GO:0030163","GO:0140096","GO:0016810","GO:0007005","GO:0005634","GO:0005829","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005739":null,"GO:0005829":null,"GO:0008418":null,"GO:0035694":null,"GO:0070773":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00476.1"],"transcripts_by_uniquename":{"SJAG_00476.1":null},"uniprot_identifier":"B6JVR1","uniquename":"SJAG_00476"}


id: SJAG_00479
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108921],"is_not":false,"summary":null,"term":"GO:0042273"}],"cellular_component":[{"annotations":[108918],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[108919],"is_not":false,"summary":null,"term":"GO:0005635"}],"molecular_function":[{"annotations":[108922],"is_not":false,"summary":null,"term":"GO:0008237"}]},"dbxrefs":["InterPro:IPR036390","EnsemblGenomes-Gn:SJAG_00479","InterPro:IPR000994","InterPro:IPR036005","UniProtKB/TrEMBL:B6JVR3","InterPro:IPR036388","EnsemblGenomes-Tr:EEB05464"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"}],"genes_by_uniquename":{"HGNC:8550":null,"SJAG_00479":null,"SPBC23E6.05":null,"YDR101C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Metallopeptidase family M24","id":"PF00557","interpro_description":"Peptidase M24","interpro_id":"IPR000994","interpro_name":"Pept_M24","locations":[{"end":133,"start":20}],"match_end":133,"match_start":20,"name":"Peptidase_M24"},{"dbname":"CDD","description":"PA2G4-like","id":"cd01089","locations":[{"end":181,"start":18}],"match_end":181,"match_start":18,"name":"PA2G4-like"},{"dbname":"SUPERFAMILY","id":"SSF46785","interpro_description":"Winged helix DNA-binding domain superfamily","interpro_id":"IPR036390","interpro_name":"WH_DNA-bd_sf","locations":[{"end":350,"start":282}],"match_end":350,"match_start":282,"name":"\"Winged helix\" DNA-binding domain"},{"dbname":"SUPERFAMILY","id":"SSF55920","interpro_description":"Creatinase/aminopeptidase-like","interpro_id":"IPR036005","interpro_name":"Creatinase/aminopeptidase-like","locations":[{"end":193,"start":13}],"match_end":193,"match_start":13,"name":"Creatinase/aminopeptidase"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.10","interpro_description":"Winged helix-like DNA-binding domain superfamily","interpro_id":"IPR036388","interpro_name":"WH-like_DNA-bd_sf","locations":[{"end":347,"start":287}],"match_end":347,"match_start":287},{"dbname":"GENE3D","id":"G3DSA:3.90.230.10","interpro_description":"Creatinase/aminopeptidase-like","interpro_id":"IPR036005","interpro_name":"Creatinase/aminopeptidase-like","locations":[{"end":219,"start":18},{"end":286,"start":244},{"end":392,"start":348}],"match_end":392,"match_start":18,"name":"Creatinase/methionine aminopeptidase superfamily"},{"dbname":"PANTHER","id":"PTHR10804","interpro_description":"Proliferation-associated protein 2G4/ARX1","interpro_id":"IPR047113","interpro_name":"PA2G4/ARX1","locations":[{"end":405,"start":8}],"match_end":405,"match_start":8,"name":"PROTEASE FAMILY M24  METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P"}],"location":{"chromosome_name":"supercont5.1","end_pos":3262018,"start_pos":3260705,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":154,"start":144}},{"range":{"end":241,"start":224}}],"name":"arx1","ortholog_annotations":[{"gene_uniquename":"SJAG_00479","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8550","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00479","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC23E6.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00479","ortholog_taxonid":4932,"ortholog_uniquename":"YDR101C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00479","ortholog_taxonid":4932,"ortholog_uniquename":"YDR101C","reference_uniquename":"PMID:26896847"}],"product":"ribosomal export complex protein Arx1, peptidase family","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008237"]}},"subset_termids":["GO:0005829","GO:0005634","GO:0042254","GO:0008233","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005635":null,"GO:0005829":null,"GO:0008237":null,"GO:0042273":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00479.1"],"transcripts_by_uniquename":{"SJAG_00479.1":null},"uniprot_identifier":"B6JVR3","uniquename":"SJAG_00479"}


id: SJAG_00480
data:
  {"cv_annotations":{"biological_process":[{"annotations":[79752],"is_not":false,"summary":null,"term":"GO:0009231"}],"cellular_component":[{"annotations":[79751],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[79750],"is_not":false,"summary":null,"term":"GO:0005758"},{"annotations":[108925],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[79749],"is_not":false,"summary":null,"term":"GO:0008686"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00480","UniProtKB/TrEMBL:B6JVR4","EnsemblGenomes-Tr:EEB05465","InterPro:IPR000422","InterPro:IPR017945","GOA:B6JVR4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"}],"genes_by_uniquename":{"SJAG_00480":null,"SPBC23E6.06c":null,"YDR487C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"3,4-dihydroxy-2-butanone 4-phosphate synthase","id":"PF00926","interpro_description":"3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB","interpro_id":"IPR000422","interpro_name":"DHBP_synthase_RibB","locations":[{"end":199,"start":6}],"match_end":199,"match_start":6,"name":"DHBP_synthase"},{"dbname":"FUNFAM","description":"3,4-dihydroxy-2-butanone 4-phosphate synthase","id":"G3DSA:3.90.870.10:FF:000002","locations":[{"end":207,"start":1}],"match_end":207,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF55821","interpro_description":"DHBP synthase RibB-like alpha/beta domain superfamily","interpro_id":"IPR017945","interpro_name":"DHBP_synth_RibB-like_a/b_dom","locations":[{"end":203,"start":2}],"match_end":203,"match_start":2,"name":"YrdC/RibB"},{"dbname":"GENE3D","id":"G3DSA:3.90.870.10","locations":[{"end":208,"start":1}],"match_end":208,"match_start":1,"name":"DHBP synthase"},{"dbname":"PANTHER","id":"PTHR21327","locations":[{"end":196,"start":1}],"match_end":196,"match_start":1,"name":"GTP CYCLOHYDROLASE II-RELATED"},{"dbname":"HAMAP","description":"3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB].","id":"MF_00180","interpro_description":"3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB","interpro_id":"IPR000422","interpro_name":"DHBP_synthase_RibB","locations":[{"end":204,"start":1}],"match_end":204,"match_start":1,"name":"RibB"},{"dbname":"NCBIFAM","description":"3,4-dihydroxy-2-butanone-4-phosphate synthase","id":"TIGR00506","interpro_description":"3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB","interpro_id":"IPR000422","interpro_name":"DHBP_synthase_RibB","locations":[{"end":199,"start":1}],"match_end":199,"match_start":1,"name":"ribB"}],"location":{"chromosome_name":"supercont5.1","end_pos":3260445,"start_pos":3259582,"strand":"forward"},"name":"rib3","ortholog_annotations":[{"gene_uniquename":"SJAG_00480","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC23E6.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00480","ortholog_taxonid":4932,"ortholog_uniquename":"YDR487C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00480","ortholog_taxonid":4932,"ortholog_uniquename":"YDR487C","reference_uniquename":"PMID:26896847"}],"product":"3,4-dihydroxy-2-butanone 4-phosphate synthase Rib3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008686"]}},"subset_termids":["GO:0016829","GO:0005634","GO:0006766","GO:0005829","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005758":null,"GO:0005829":null,"GO:0008686":null,"GO:0009231":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00480.1"],"transcripts_by_uniquename":{"SJAG_00480.1":null},"uniprot_identifier":"B6JVR4","uniquename":"SJAG_00480"}


id: SJAG_00481
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":638,"start":37}}],"cv_annotations":{"sequence":[{"annotations":[82359],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00481","EnsemblGenomes-Tr:EEB05466","UniProtKB/TrEMBL:B6JVR5"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":638,"start":604}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"}],"genes_by_uniquename":{"SJAG_00481":null,"SPBC21C3.14c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":638,"start":604}],"match_end":638,"match_start":604,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":632,"start":619}],"match_end":632,"match_start":619,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3258757,"start_pos":3256841,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":27,"start":20}},{"range":{"end":292,"start":263}},{"range":{"end":306,"start":296}},{"range":{"end":329,"start":313}},{"range":{"end":631,"start":618}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00481","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.14c","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein with signal peptide","references_by_uniquename":{"PMID:21511999":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":36,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00481.1"],"transcripts_by_uniquename":{"SJAG_00481.1":null},"uniprot_identifier":"B6JVR5","uniquename":"SJAG_00481"}


id: SJAG_00482
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":243,"start":243}}],"cv_annotations":{"cellular_component":[{"annotations":[108765],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[108766],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[80415],"is_not":false,"summary":null,"term":"GO:0004029"}]},"dbxrefs":["InterPro:IPR016162","EnsemblGenomes-Gn:SJAG_00482","InterPro:IPR015590","InterPro:IPR016160","GOA:B6JVR6","InterPro:IPR029510","EnsemblGenomes-Tr:EEB05467","InterPro:IPR016161","UniProtKB/TrEMBL:B6JVR6","InterPro:IPR016163"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"}],"genes_by_uniquename":{"SJAG_00482":null,"SPBC21C3.15c":null,"YHR039C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Aldehyde dehydrogenase family","id":"PF00171","interpro_description":"Aldehyde dehydrogenase domain","interpro_id":"IPR015590","interpro_name":"Aldehyde_DH_dom","locations":[{"end":471,"start":8}],"match_end":471,"match_start":8,"name":"Aldedh"},{"dbname":"CDD","description":"ALDH_F15-22","id":"cd07098","locations":[{"end":475,"start":13}],"match_end":475,"match_start":13,"name":"ALDH_F15-22"},{"dbname":"PROSITE_PATTERNS","description":"Aldehyde dehydrogenases cysteine active site.","id":"PS00070","interpro_description":"Aldehyde dehydrogenase, cysteine active site","interpro_id":"IPR016160","interpro_name":"Ald_DH_CS_CYS","locations":[{"end":281,"start":270}],"match_end":281,"match_start":270,"name":"ALDEHYDE_DEHYDR_CYS"},{"dbname":"PROSITE_PATTERNS","description":"Aldehyde dehydrogenases glutamic acid active site.","id":"PS00687","interpro_description":"Aldehyde dehydrogenase, glutamic acid active site","interpro_id":"IPR029510","interpro_name":"Ald_DH_CS_GLU","locations":[{"end":249,"start":242}],"match_end":249,"match_start":242,"name":"ALDEHYDE_DEHYDR_GLU"},{"dbname":"FUNFAM","description":"Betaine aldehyde dehydrogenase","id":"G3DSA:3.40.309.10:FF:000024","locations":[{"end":440,"start":246}],"match_end":440,"match_start":246},{"dbname":"SUPERFAMILY","id":"SSF53720","interpro_description":"Aldehyde/histidinol dehydrogenase","interpro_id":"IPR016161","interpro_name":"Ald_DH/histidinol_DH","locations":[{"end":475,"start":5}],"match_end":475,"match_start":5,"name":"ALDH-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.309.10","interpro_description":"Aldehyde dehydrogenase, C-terminal","interpro_id":"IPR016163","interpro_name":"Ald_DH_C","locations":[{"end":441,"start":246}],"match_end":441,"match_start":246,"name":"Aldehyde Dehydrogenase; Chain A, domain 2"},{"dbname":"GENE3D","id":"G3DSA:3.40.605.10","interpro_description":"Aldehyde dehydrogenase, N-terminal","interpro_id":"IPR016162","interpro_name":"Ald_DH_N","locations":[{"end":245,"start":10},{"end":469,"start":442}],"match_end":469,"match_start":10,"name":"Aldehyde Dehydrogenase; Chain A, domain 1"},{"dbname":"PANTHER","id":"PTHR11699","locations":[{"end":471,"start":7}],"match_end":471,"match_start":7,"name":"ALDEHYDE DEHYDROGENASE-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3256063,"start_pos":3254483,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00482","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00482","ortholog_taxonid":4932,"ortholog_uniquename":"YHR039C","reference_uniquename":"PMID:29761456"}],"product":"aldehyde dehydrogenase, implicated in cellular detoxification","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004029"]}},"subset_termids":["GO:0016491","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004029":null,"GO:0005634":null,"GO:0005829":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":520,"start":498}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00482.1"],"transcripts_by_uniquename":{"SJAG_00482.1":null},"uniprot_identifier":"B6JVR6","uniquename":"SJAG_00482"}


id: SJAG_00483
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108773],"is_not":false,"summary":null,"term":"GO:0006368"}],"cellular_component":[{"annotations":[108768],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[60308],"is_not":false,"summary":null,"term":"GO:0000775"},{"annotations":[108770],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[74071],"is_not":false,"summary":null,"term":"GO:0032044"}],"molecular_function":[{"annotations":[74072],"is_not":false,"summary":null,"term":"GO:0000993"},{"annotations":[108774],"is_not":false,"summary":null,"term":"GO:0003711"},{"annotations":[108775],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVR7","EnsemblGenomes-Tr:EEB05468","InterPro:IPR022800","InterPro:IPR029040","GOA:B6JVR7","InterPro:IPR009287","EnsemblGenomes-Gn:SJAG_00483","InterPro:IPR038510"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"}],"genes_by_uniquename":{"HGNC:11467":null,"SJAG_00483":null,"SPBC21C3.16c":null,"YGR063C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Spt4/RpoE2 zinc finger","id":"PF06093","interpro_description":"Spt4/RpoE2 zinc finger","interpro_id":"IPR022800","interpro_name":"Spt4/RpoE2_Znf","locations":[{"end":78,"start":10}],"match_end":78,"match_start":10,"name":"Spt4"},{"dbname":"CDD","description":"Spt4","id":"cd07973","interpro_description":"Spt4/RpoE2 zinc finger","interpro_id":"IPR022800","interpro_name":"Spt4/RpoE2_Znf","locations":[{"end":96,"start":8}],"match_end":96,"match_start":8,"name":"Spt4"},{"dbname":"SMART","id":"SM01389","interpro_description":"Spt4/RpoE2 zinc finger","interpro_id":"IPR022800","interpro_name":"Spt4/RpoE2_Znf","locations":[{"end":78,"start":9}],"match_end":78,"match_start":9,"name":"Spt4_2"},{"dbname":"SUPERFAMILY","id":"SSF63393","interpro_description":"RNA polymerase subunit RPABC4/transcription elongation factor Spt4","interpro_id":"IPR029040","interpro_name":"RPABC4/Spt4","locations":[{"end":77,"start":5}],"match_end":77,"match_start":5,"name":"RNA polymerase subunits"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.210","interpro_description":"Spt4 superfamily","interpro_id":"IPR038510","interpro_name":"Spt4_sf","locations":[{"end":105,"start":7}],"match_end":105,"match_start":7},{"dbname":"PANTHER","id":"PTHR12882","interpro_description":"Transcription initiation Spt4","interpro_id":"IPR009287","interpro_name":"Spt4","locations":[{"end":102,"start":7}],"match_end":102,"match_start":7,"name":"SUPPRESSOR OF TY 4"},{"dbname":"PIRSF","id":"PIRSF025023","interpro_description":"Transcription initiation Spt4","interpro_id":"IPR009287","interpro_name":"Spt4","locations":[{"end":104,"start":1}],"match_end":104,"match_start":1,"name":"Spt4"}],"location":{"chromosome_name":"supercont5.1","end_pos":3253840,"start_pos":3253523,"strand":"forward"},"name":"spt4","ortholog_annotations":[{"gene_uniquename":"SJAG_00483","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11467","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00483","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00483","ortholog_taxonid":4932,"ortholog_uniquename":"YGR063C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00483","ortholog_taxonid":4932,"ortholog_uniquename":"YGR063C","reference_uniquename":"PMID:26896847"}],"product":"DSIF transcription elongation factor complex subunit Spt4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270","GO:0000993"],"not-binding":["GO:0003711"]}},"subset_termids":["GO:0005829","GO:0005694","GO:0005634","GO:0003711","GO:0005654","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000775":null,"GO:0000785":null,"GO:0000993":null,"GO:0003711":null,"GO:0005829":null,"GO:0006368":null,"GO:0008270":null,"GO:0032044":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00483.1"],"transcripts_by_uniquename":{"SJAG_00483.1":null},"uniprot_identifier":"B6JVR7","uniquename":"SJAG_00483"}


id: SJAG_00484
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":182,"start":23}}],"cv_annotations":{"biological_process":[{"annotations":[108777],"is_not":false,"summary":null,"term":"GO:0006888"}],"cellular_component":[{"annotations":[108776],"is_not":false,"summary":null,"term":"GO:0005794"}],"sequence":[{"annotations":[82277],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["GOA:B6JVR8","EnsemblGenomes-Gn:SJAG_00484","InterPro:IPR028000","UniProtKB/TrEMBL:B6JVR8","EnsemblGenomes-Tr:EEB05469"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00489"},{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"}],"genes_by_uniquename":{"SJAG_00484":null,"SPBC21C3.17c":null,"YKL077W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ykl077w/Psg1 (Pma1 Stabilization in Golgi)","id":"PF14610","interpro_description":"Pma1 stabilization in the Golgi protein 1","interpro_id":"IPR028000","interpro_name":"Pma1","locations":[{"end":172,"start":10}],"match_end":172,"match_start":10,"name":"Psg1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3253018,"start_pos":3252327,"strand":"forward"},"name":"psg1","ortholog_annotations":[{"gene_uniquename":"SJAG_00484","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.17c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00484","ortholog_taxonid":4932,"ortholog_uniquename":"YKL077W","reference_uniquename":"PMID:29761456"}],"product":"membrane trafficking protein, ER to Golgi Psg1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":22,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"subset_termids":["GO:0016192","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null,"GO:0006888":null,"SO:0000418":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":165,"start":143}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00484.1"],"transcripts_by_uniquename":{"SJAG_00484.1":null},"uniprot_identifier":"B6JVR8","uniquename":"SJAG_00484"}


id: SJAG_00485
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":228,"start":228}},{"assigned_by":"UniProtKB","range":{"end":252,"start":252}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":106,"start":106}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":145,"start":145}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":226,"start":226}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":256,"start":256}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":320,"start":320}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":367,"start":367}}],"cv_annotations":{"biological_process":[{"annotations":[97100],"is_not":false,"summary":null,"term":"GO:0016052"},{"annotations":[115992],"is_not":false,"summary":null,"term":"GO:0005976"}],"cellular_component":[{"annotations":[67834],"is_not":false,"summary":null,"term":"GO:0009986"},{"annotations":[115990],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[115991],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[67833],"is_not":false,"summary":null,"term":"GO:0004556"},{"annotations":[67832],"is_not":false,"summary":null,"term":"GO:0005509"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05470","InterPro:IPR006047","InterPro:IPR017853","UniProtKB/TrEMBL:B6JVR9","InterPro:IPR013777","GOA:B6JVR9","EnsemblGenomes-Gn:SJAG_00485"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubx4","uniquename":"SJAG_00490"},{"uniquename":"SJAG_00489"},{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"}],"genes_by_uniquename":{"SJAG_00485":null,"SPAC27E2.01":null,"SPCC11E10.09c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Alpha amylase, catalytic domain","id":"PF00128","interpro_description":"Glycosyl hydrolase, family 13, catalytic domain","interpro_id":"IPR006047","interpro_name":"Glyco_hydro_13_cat_dom","locations":[{"end":361,"start":38}],"match_end":361,"match_start":38,"name":"Alpha-amylase"},{"dbname":"CDD","description":"AmyAc_euk_AmyA","id":"cd11319","locations":[{"end":398,"start":28}],"match_end":398,"match_start":28,"name":"AmyAc_euk_AmyA"},{"dbname":"SMART","id":"SM00642","interpro_description":"Glycosyl hydrolase, family 13, catalytic domain","interpro_id":"IPR006047","interpro_name":"Glyco_hydro_13_cat_dom","locations":[{"end":392,"start":38}],"match_end":392,"match_start":38,"name":"aamy"},{"dbname":"FUNFAM","description":"Alpha-amylase A","id":"G3DSA:3.20.20.80:FF:000120","locations":[{"end":397,"start":27}],"match_end":397,"match_start":27},{"dbname":"SUPERFAMILY","id":"SSF51445","interpro_description":"Glycoside hydrolase superfamily","interpro_id":"IPR017853","interpro_name":"Glycoside_hydrolase_SF","locations":[{"end":392,"start":31}],"match_end":392,"match_start":31,"name":"(Trans)glycosidases"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.1180","interpro_description":"Glycosyl hydrolase, all-beta","interpro_id":"IPR013780","interpro_name":"Glyco_hydro_b","locations":[{"end":492,"start":399}],"match_end":492,"match_start":399},{"dbname":"GENE3D","id":"G3DSA:3.20.20.80","locations":[{"end":396,"start":27}],"match_end":396,"match_start":27,"name":"Glycosidases"},{"dbname":"PANTHER","id":"PTHR10357","locations":[{"end":441,"start":28}],"match_end":441,"match_start":28,"name":"ALPHA-AMYLASE FAMILY MEMBER"},{"dbname":"PIRSF","id":"PIRSF001024","interpro_description":"Alpha-amylase-like","interpro_id":"IPR013777","interpro_name":"A-amylase-like","locations":[{"end":491,"start":4}],"match_end":491,"match_start":4,"name":"Alph-amyl_fung"}],"location":{"chromosome_name":"supercont5.1","end_pos":3251801,"start_pos":3250200,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00485","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC27E2.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00485","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC11E10.09c","reference_uniquename":"PMID:21511999"}],"product":"alpha amylase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005509"],"not-binding":["GO:0004556"]}},"subset_termids":["GO:0005975","GO:0016798","GO:0005634","GO:0009986","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004556":null,"GO:0005509":null,"GO:0005634":null,"GO:0005829":null,"GO:0005976":null,"GO:0009986":null,"GO:0016052":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00485.1"],"transcripts_by_uniquename":{"SJAG_00485.1":null},"uniprot_identifier":"B6JVR9","uniquename":"SJAG_00485"}


