# terms

id: MONDO:0016556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"transient congenital hypothyroidism","termid":"MONDO:0015792"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient congenital hypothyroidism due to neonatal factor","secondary_identifiers":["UMLS:C5680930","GARD:20646","MEDGEN:1842815","Orphanet:238699"],"termid":"MONDO:0016556","xrefs":{"Monarch":{"xref_id":"0016556"}}}


id: GO:0071030
data:
  {"annotated_genes":["SJAG_04500","SJAG_00456","SJAG_02005","SJAG_02622","SJAG_01331","SJAG_04025","SJAG_02382","SJAG_05243","SJAG_04768","SJAG_02879"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89318,90676,92641,94226,96881,108255,111228,111758,117553,120135],"is_not":false,"summary":null,"term":"GO:0071030"}]},"cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading incorrectly spliced pre-mRNAs within the nucleus.","definition_xrefs":["GOC:dgf","GOC:krc","PMID:18644474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear mRNA surveillance","termid":"GO:0071028"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00456":null,"SJAG_01331":null,"SJAG_02005":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02879":null,"SJAG_04025":null,"SJAG_04500":null,"SJAG_04768":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"nuclear mRNA surveillance of spliceosomal pre-mRNA splicing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear RNA catabolic process of incorrectly spliced pre-mRNA","type":"exact"},{"name":"nuclear mRNA quality control of incorrectly spliced pre-mRNA","type":"exact"}],"termid":"GO:0071030","terms_by_termid":{"GO:0071030":null}}


id: PBO:0065903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB44, member RAS oncogene family","termid":"PBO:0065903"}


id: MONDO:0012736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any long QT syndrome in which the cause of the disease is a mutation in the CAV3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 9","secondary_identifiers":["UMLS:C2678485","MEDGEN:395635","DOID:0110650","GARD:10435","OMIM:611818","MESH:C567515"],"synonyms":[{"name":"CAV3 long QT syndrome","type":"exact"},{"name":"LQT9","type":"exact"},{"name":"long QT syndrome 2/9, digenic","type":"related"},{"name":"long QT syndrome 9","type":"exact"},{"name":"long QT syndrome 9, acquired, susceptibility to","type":"related"},{"name":"long QT syndrome caused by mutation in CAV3","type":"exact"},{"name":"long QT syndrome type 9","type":"exact"}],"termid":"MONDO:0012736","xrefs":{"Monarch":{"xref_id":"0012736"}}}


id: GO:0008897
data:
  {"annotated_genes":["SJAG_04972","SJAG_03180","SJAG_01955"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58720,69080,76810],"is_not":false,"summary":null,"term":"GO:0008897"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + substrate-serine = adenosine 3',5'-bisphosphate + substrate-serine-4'-phosphopantetheine. The transfer of the 4'-phosphopantetheine (Ppant) co-factor from coenzyme A to the hydroxyl side chain of the serine residue of acyl- or peptidyl-carrier protein (ACP or PCP) to convert them from the apo to the holo form.","definition_xrefs":["PMID:10320345","PMID:11867633","EC:2.7.8.7","PMID:8939709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01955":null,"SJAG_03180":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016780","GO:0016740"],"is_obsolete":false,"name":"holo-[acyl-carrier-protein] synthase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:HOLO-ACP-SYNTH-RXN","Reactome:R-HSA-199202","RHEA:12068","GO:0008958"],"synonyms":[{"name":"4'-phosphopantetheinyl transferase activity","type":"related"},{"name":"4'-phosphopantetheinyltransferase activity","type":"exact"},{"name":"ACPS activity","type":"related"},{"name":"AcpS","type":"related"},{"name":"CoA-[4'-phosphopantetheine]:apo-acyl-carrier-protein 4'-pantetheinephosphotransferase activity","type":"related"},{"name":"CoA:apo-acyl-carrier-protein pantetheinephosphotransferase activity","type":"related"},{"name":"L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase activity","type":"narrow"},{"name":"P-pant transferase activity","type":"related"},{"name":"PPTase activity","type":"related"},{"name":"acyl carrier protein holoprotein (holo-ACP) synthetase activity","type":"related"},{"name":"acyl carrier protein synthase activity","type":"related"},{"name":"acyl carrier protein synthetase activity","type":"related"},{"name":"alpha-aminoadipate reductase phosphopantetheinyl transferase activity","type":"exact"},{"name":"alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase activity","type":"related"},{"name":"alphaaminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase activity","type":"related"},{"name":"coenzyme A:fatty acid synthetase apoenzyme 4'-phosphopantetheine transferase activity","type":"related"},{"name":"holo-ACP synthase activity","type":"related"},{"name":"holo-ACP synthetase activity","type":"related"},{"name":"holo-[peptidyl-carrier protein] synthase activity","type":"narrow"},{"name":"holo-acyl-carrier-protein synthase activity","type":"related"},{"name":"holosynthase activity","type":"related"},{"name":"phosphopantetheinyl transferase","type":"related"},{"name":"phosphopantetheinyltransferase activity","type":"exact"}],"termid":"GO:0008897","terms_by_termid":{"GO:0008897":null}}


id: GO:0090309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA methylation-dependent heterochromatin formation (obsolete GO:0090309)","synonyms":[{"name":"positive regulation of DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"positive regulation of methylation-dependent chromatin silencing","type":"broad"}],"termid":"GO:0090309"}


id: GO:0098629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a trans-Golgi network membrane.","definition_xrefs":["PMID:23345439","GOC:di","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"trans-Golgi network membrane organization","termid":"GO:0098629"}


id: PBO:0079370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 4","termid":"PBO:0079370"}


id: MONDO:0010279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by malformation of the hands and feet, pigmentary skin lesions on the face and scalp and digital fibromatosis.","definition_xrefs":["Orphanet:88630"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal osseous dysplasia-pigmentary defects syndrome","secondary_identifiers":["OMIM:300244","DOID:0112149","GARD:16769","MESH:C564554","MEDGEN:335344","UMLS:C1846129"],"synonyms":[{"name":"Odpd","type":"related"},{"name":"Odpf syndrome","type":"related"},{"name":"TOD","type":"related"},{"name":"osseous dysplasia, digital, with Facial pigmentary defects and multiple frenula","type":"related"},{"name":"terminal osseous dysplasia","type":"related"},{"name":"terminal osseous dysplasia and pigmentary defects","type":"related"},{"name":"terminal osseous dysplasia, X-linked dominant","type":"exact"}],"termid":"MONDO:0010279","xrefs":{"Monarch":{"xref_id":"0010279"}}}


id: PBO:0082479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carbon source-responsive zinc-finger transcription factor; required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization","termid":"PBO:0082479"}


id: FYPO:0007976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during anaphase B in which the duration of interpolar microtubule growth events is longer.","definition_xrefs":["PomBase:mlr","PMID:35293864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal duration of microtubule growth event","termid":"FYPO:0007956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of interpolar microtubule growth events during anaphase B","termid":"FYPO:0007976"}


id: MONDO:0021221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the vestibulocochlear nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibulocochlear nerve disorder","termid":"MONDO:0001563"},{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibulocochlear nerve neoplasm","secondary_identifiers":["NCIT:C5120","SCTID:387891008","UMLS:C0346330","MEDGEN:91099"],"synonyms":[{"name":"Vestibuloacoustic nerve neoplasms","type":"exact"},{"name":"acoustic nerve neoplasm","type":"exact"},{"name":"acoustic nerve tumor","type":"exact"},{"name":"acoustic nerve tumour","type":"exact"},{"name":"cranial nerve eight neoplasms","type":"exact"},{"name":"eighth cranial nerve neoplasm","type":"exact"},{"name":"eighth cranial nerve neoplasms","type":"exact"},{"name":"eighth cranial nerve tumor","type":"exact"},{"name":"eighth cranial nerve tumour","type":"exact"},{"name":"neoplasm of acoustic nerve","type":"exact"},{"name":"neoplasm of eighth cranial nerve","type":"exact"},{"name":"neoplasm of the acoustic nerve","type":"exact"},{"name":"neoplasm of the eighth cranial nerve","type":"exact"},{"name":"neoplasm of the vestibulocochlear nerve","type":"exact"},{"name":"neoplasm of vestibulocochlear nerve","type":"exact"},{"name":"tumor of acoustic nerve","type":"exact"},{"name":"tumor of eighth cranial nerve","type":"exact"},{"name":"tumor of the acoustic nerve","type":"exact"},{"name":"tumor of the eighth cranial nerve","type":"exact"},{"name":"tumor of the vestibulocochlear nerve","type":"exact"},{"name":"tumor of vestibulocochlear nerve","type":"exact"},{"name":"tumour of acoustic nerve","type":"exact"},{"name":"tumour of eighth cranial nerve","type":"exact"},{"name":"tumour of the acoustic nerve","type":"exact"},{"name":"tumour of the eighth cranial nerve","type":"exact"},{"name":"tumour of the vestibulocochlear nerve","type":"exact"},{"name":"tumour of vestibulocochlear nerve","type":"exact"},{"name":"vestibulocochlear nerve neoplasm (disease)","type":"exact"},{"name":"vestibulocochlear nerve neoplasms","type":"exact"},{"name":"vestibulocochlear nerve tumor","type":"exact"},{"name":"vestibulocochlear nerve tumour","type":"exact"}],"termid":"MONDO:0021221","xrefs":{"Monarch":{"xref_id":"0021221"}}}


id: MONDO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of angle-closure glaucoma.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary angle-closure glaucoma","termid":"MONDO:0001868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic closed-angle glaucoma","secondary_identifiers":["DOID:14445","MEDGEN:509736","UMLS:C0154947","SCTID:33647009","ICD9:365.23"],"synonyms":[{"name":"anatomical narrow angle glaucoma","type":"exact"},{"name":"angle-closure glaucoma, chronic","type":"exact"},{"name":"chronic angle-closure glaucoma","type":"exact"},{"name":"chronic narrow angle glaucoma","type":"exact"}],"termid":"MONDO:0001966","xrefs":{"Monarch":{"xref_id":"0001966"}}}


id: PBO:0070556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 22","termid":"PBO:0070556"}


id: PBO:0046158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR long non-coding downstream RNA","termid":"PBO:0046158"}


id: _global:gene_product_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"definition \\\"x has gene product of y if and only if y is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from x\\\"","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"_global:genomically_related_to"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_of","secondary_identifiers":["RO:0002204","GOREL:0001028"],"termid":"_global:gene_product_of"}


id: GO:0016072
data:
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id: MONDO:0005700
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id: GO:0005551
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id: GO:0051517
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id: MONDO:1012748
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id: GO:0007551
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id: GO:0080092
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id: MONDO:0038261
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id: MONDO:0006748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A variant of epilepsy characterized by continuous focal jerking of a body part over a period of hours, days, or even years without spreading to other body regions. Contractions may be aggravated by movement and are reduced, but not abolished during sleep. electroencephalography demonstrates epileptiform (spike and wave) discharges over the hemisphere opposite to the affected limb in most instances. The repetitive movements may originate from the cerebral cortex or from subcortical structures (e.g., brain stem; basal ganglia). This condition is associated with Russian Spring and Summer encephalitis; Rasmussen syndrome; multiple sclerosis; diabetes mellitus; brain neoplasms; and cerebrovascular disorders.","definition_xrefs":["PMID:8800935","MESH:D017036","PMID:7681771"],"gene_count":0,"genotype_count":0,"name":"obsolete epilepsia partialis continua (obsolete MONDO:0006748)","secondary_identifiers":["MedDRA:10015034","SCTID:241006","ICD9:345.7","ICD9:345.70","DOID:11349","EFO:1000924","icd11.foundation:669338526"],"termid":"MONDO:0006748","xrefs":{"Monarch":{"xref_id":"0006748"}}}


id: GO:0039503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the innate immune response of the host organism, the host's first line of defense.","definition_xrefs":["GOC:sp","GOC:add","GOC:bf","UniProtKB-KW:KW-1090"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host innate immune response (obsolete GO:0039503)","synonyms":[{"name":"inhibition of host innate immune response by virus","type":"exact"},{"name":"negative regulation by virus of host innate immune response","type":"exact"},{"name":"negative regulation by virus of host innate immunity","type":"exact"},{"name":"suppression by virus of host innate immunity","type":"exact"}],"termid":"GO:0039503"}


id: GO:0016360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a sensory organ precursor cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination involved in pattern specification","termid":"GO:0060582"},{"relation_name":"part_of","term_name":"sensory organ boundary specification","termid":"GO:0008052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ precursor cell fate determination","synonyms":[{"name":"sense organ precursor cell fate determination","type":"exact"}],"termid":"GO:0016360"}


id: MONDO:0003171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A astrocytoma that involves the pineal body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diencephalic astrocytomas","termid":"MONDO:0003169"},{"relation_name":"is_a","term_name":"pineal gland cancer","termid":"MONDO:0003249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal gland astrocytoma","secondary_identifiers":["MEDGEN:83711","UMLS:C0280795","NCIT:C8274","DOID:4858"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of pineal body","type":"exact"},{"name":"astrocytoma of pineal gland","type":"exact"},{"name":"astrocytoma of the pineal gland","type":"exact"},{"name":"pineal astrocytic tumor","type":"exact"},{"name":"pineal astrocytic tumour","type":"exact"},{"name":"pineal astrocytoma","type":"exact"},{"name":"pineal body astrocytoma","type":"exact"},{"name":"pineal body astrocytoma (excluding glioblastoma)","type":"exact"}],"termid":"MONDO:0003171","xrefs":{"Monarch":{"xref_id":"0003171"}}}


id: PBO:0070983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 7","termid":"PBO:0070983"}


id: PBO:0085541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; interacts with Kti11p; deletion causes hypersensitivity to zymocin; homologous to mammalian ribosomal protein S7, no bacterial homolog; RPS7A has a paralog, RPS7B, that arose from the whole genome duplication","termid":"PBO:0085541"}


id: PBO:0039600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member B pseudogene 1","termid":"PBO:0039600"}


id: MONDO:1011606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vestibular disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular disease, non-human animal","termid":"MONDO:1011414"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular disease, dog","secondary_identifiers":["OMIA:002263-9615"],"termid":"MONDO:1011606","xrefs":{"Monarch":{"xref_id":"1011606"}}}


id: PBO:0072458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 22","termid":"PBO:0072458"}


id: SO:0001881
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where the structural change, a translocation, is greater than the extent of the underlying genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_translocation","synonyms":[{"name":"feature translocation","type":"exact"}],"termid":"SO:0001881"}


id: MONDO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the penis and is characterized by the presence of a papillary growth pattern.","definition_xrefs":["NCIT:C6983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary squamous carcinoma","termid":"MONDO:0002979"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of penis","termid":"MONDO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary carcinoma of the penis","secondary_identifiers":["DOID:8013","MEDGEN:235455","UMLS:C1335322"],"synonyms":[{"name":"papillary carcinoma of penis","type":"exact"},{"name":"papillary carcinoma of the penis","type":"exact"},{"name":"papillary penile carcinoma","type":"exact"},{"name":"papillary penile squamous carcinoma","type":"exact"},{"name":"papillary squamous carcinoma of penis","type":"exact"},{"name":"papillary squamous carcinoma of the penis","type":"exact"},{"name":"penis papillary carcinoma","type":"exact"},{"name":"squamous carcinoma of penis, papillary type","type":"exact"},{"name":"squamous carcinoma of the penis, papillary type","type":"exact"}],"termid":"MONDO:0004433","xrefs":{"Monarch":{"xref_id":"0004433"}}}


id: PBO:0004242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-dependent serine/threonine protein phosphatase calcineurin, catalytic subunit Ppb1","termid":"PBO:0004242"}


id: PBO:0002572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cargo-transport protein Ypp1 (predicted)","termid":"PBO:0002572"}


id: GO:0005344
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to oxygen and delivering it to an acceptor molecule or a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"oxygen carrier activity","secondary_identifiers":["GO:0015033"],"synonyms":[{"name":"globin","type":"narrow"},{"name":"hemerythrin","type":"narrow"},{"name":"hemocyanin","type":"narrow"},{"name":"oxygen-carrying","type":"narrow"}],"termid":"GO:0005344"}


id: MONDO:0007073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition that primarily affects the craniofacial region and the limbs (arms and legs). People affected by this condition are often born with a short, incompletely developed tongue; absent or partially missing fingers and/or toes; abnormalities of the arms and/or legs; and an extremely small jaw. The severity of these physical abnormalities varies greatly among affected people, and children with this condition often have some, but not all, of the symptoms. The cause of Hanhart syndrome is not fully understood. Treatment depends on the signs and symptoms present in each person.","definition_xrefs":["GARD:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"oromandibular-limb hypogenesis syndrome","termid":"MONDO:0017139"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Hypoglossia-hypodactyly syndrome","secondary_identifiers":["NORD:1215","SCTID:35031005","OMIM:103300","Orphanet:989","MEDGEN:354928","UMLS:C1863203","ICD9:759.89","GARD:68"],"synonyms":[{"name":"Hanhart Syndrome","type":"exact"},{"name":"Hanhart syndrome","type":"exact"},{"name":"Hypoglossia-hypodactylia","type":"related"},{"name":"Hypoglossia-hypodactylia syndrome","type":"related"},{"name":"Jussieu syndrome","type":"exact"},{"name":"aglossia adactylia","type":"related"},{"name":"aglossia-adactylia","type":"related"},{"name":"aglossia-adactylia syndrome","type":"exact"},{"name":"oromandibular limb hypoplasia","type":"related"},{"name":"peromelia with micrognathia","type":"related"},{"name":"peromelia with micrognathism","type":"related"}],"termid":"MONDO:0007073","xrefs":{"Monarch":{"xref_id":"0007073"}}}


id: MONDO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A single, fluid-filled cyst in the breast parenchyma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast cyst","termid":"MONDO:0001011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solitary cyst of breast","secondary_identifiers":["UMLS:C0037619","DOID:10349","SCTID:266578003","ICD10CM:N60.0","ICD9:610.0","MEDGEN:20866"],"synonyms":[{"name":"solitary cyst of breast","type":"exact"},{"name":"solitary cyst of the breast","type":"exact"}],"termid":"MONDO:0001009","xrefs":{"Monarch":{"xref_id":"0001009"}}}


id: GO:0050267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (cis-prenyl)n-diphosphate + isopentenyl diphosphate = (cis-prenyl)(n+1)-diphosphate + diphosphate.","definition_xrefs":["RHEA:18801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"rubber cis-polyprenylcistransferase activity","secondary_identifiers":["MetaCyc:2.5.1.20-RXN","EC:2.5.1.20"],"synonyms":[{"name":"cis-prenyl transferase activity","type":"related"},{"name":"isopentenyl pyrophosphate cis-1,4-polyisoprenyl transferase activity","type":"related"},{"name":"poly-cis-polyprenyl-diphosphate:isopentenyl-diphosphate polyprenylcistransferase activity","type":"related"},{"name":"rubber allyltransferase activity","type":"related"},{"name":"rubber polymerase activity","type":"related"},{"name":"rubber prenyltransferase activity","type":"related"},{"name":"rubber transferase activity","type":"broad"}],"termid":"GO:0050267"}


id: GO:0008681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methoxy-6-(all-trans-octaprenyl)phenol + H+ + NADPH + O2 = 2-methoxy-6-all-trans-octaprenyl-1,4-benzoquinol + H2O + NADP+.","definition_xrefs":["RHEA:29407","PMID:4572721","PMID:27822549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-octaprenyl-6-methoxyphenol hydroxylase activity","secondary_identifiers":["MetaCyc:2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN"],"termid":"GO:0008681"}


id: PBO:0039420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin 4","termid":"PBO:0039420"}


id: PBO:0045689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNLL2 divergent transcript","termid":"PBO:0045689"}


id: PBO:0089060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, MIZ-type","termid":"PBO:0089060"}


id: PBO:0117182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND1A antisense RNA 1","termid":"PBO:0117182"}


id: PBO:0077445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 178B","termid":"PBO:0077445"}


id: FYPO:0002336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin silencing at silent mating-type cassette","synonyms":[{"name":"normal chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"normal chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0002336"}


id: GO:0032430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme phospholipase A2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipase activity","termid":"GO:0010518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipase A2 activity","synonyms":[{"name":"activation of phospholipase A2 activity","type":"narrow"},{"name":"stimulation of phospholipase A2 activity","type":"narrow"},{"name":"up regulation of phospholipase A2 activity","type":"exact"},{"name":"up-regulation of phospholipase A2 activity","type":"exact"},{"name":"upregulation of phospholipase A2 activity","type":"exact"}],"termid":"GO:0032430"}


id: PBO:0071966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A5","termid":"PBO:0071966"}


id: GO:0065005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and lipids to form a protein-lipid complex.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"protein-lipid complex organization","termid":"GO:0071825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein-lipid complex assembly","termid":"GO:0065005"}


id: MONDO:0003540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute T cell leukemia (obsolete MONDO:0003540)","termid":"MONDO:0003540","xrefs":{"Monarch":{"xref_id":"0003540"}}}


id: PBO:0081162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RNA binding protein pseudogene 1","termid":"PBO:0081162"}


id: GO:0032642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of chemokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine production","secondary_identifiers":["GO:0045073","GO:0090196"],"synonyms":[{"name":"regulation of chemokine biosynthetic process","type":"narrow"},{"name":"regulation of chemokine secretion","type":"narrow"}],"termid":"GO:0032642"}


id: PBO:0090778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-O ortholog Mal2","termid":"PBO:0090778"}


id: PBO:0078429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (GCC) 6-1","termid":"PBO:0078429"}


id: MONDO:0007230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachymorphism-onychodysplasia-dysphalangism (BOD) is a very rare malformation syndrome that is characterized by short stature, hypoplastic fifth digits with tiny dysplastic nails, facial dysmorphism with coarse features including a wide mouth and broad nose, and mild intellectual disability. It has been suggested that Coffin-Siris syndrome and BOD syndrome are perhaps allelic variants.","definition_xrefs":["Orphanet:1292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brachymorphism-onychodysplasia-dysphalangism syndrome","secondary_identifiers":["OMIM:113477","UMLS:C1862082","MESH:C536242","MEDGEN:350585","SCTID:720573009","GARD:918"],"synonyms":[{"name":"Brachymorphism onychodysplasia dysphalangism syndrome","type":"related"},{"name":"Brachymorphism-onychodysplasia-dysphalangism syndrome","type":"exact"},{"name":"Senior syndrome","type":"exact"},{"name":"bod syndrome","type":"exact"}],"termid":"MONDO:0007230","xrefs":{"Monarch":{"xref_id":"0007230"}}}


id: GO:0002705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"positively_regulates","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte mediated immunity","synonyms":[{"name":"activation of leukocyte mediated immunity","type":"narrow"},{"name":"positive regulation of immune cell mediated immunity","type":"exact"},{"name":"positive regulation of leucocyte mediated immunity","type":"exact"},{"name":"stimulation of leukocyte mediated immunity","type":"narrow"},{"name":"up regulation of leukocyte mediated immunity","type":"exact"},{"name":"up-regulation of leukocyte mediated immunity","type":"exact"},{"name":"upregulation of leukocyte mediated immunity","type":"exact"}],"termid":"GO:0002705"}


id: GO:0033156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oligogalacturonides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"oligogalacturonide transport","termid":"GO:0033156"}


id: PBO:0001132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein Arp8","termid":"PBO:0001132"}


id: PBO:0055919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A7, pseudogene","termid":"PBO:0055919"}


id: PBO:0041144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4 pseudogene 3","termid":"PBO:0041144"}


id: GO:0042750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism enters and maintains a period of dormancy in which to pass the winter. It is characterized by narcosis and by sharp reduction in body temperature and metabolic activity and by a depression of vital signs.","definition_xrefs":["GOC:jl","PMID:1945046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hibernation","secondary_identifiers":["Wikipedia:Hibernation"],"termid":"GO:0042750"}


id: GO:0140112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and secretion a set of components to form an extracellular vesicule, a membrane-bounded vesicle that is released into the extracellular region. Extracellular vesicles include exosomes, microvesicles and apoptotic bodies, based on the mechanism by which they are released from cells and differentiated based on their size and content.","definition_xrefs":["PMID:28736435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"extracellular vesicle biogenesis","synonyms":[{"name":"extracellular vesicle assembly","type":"exact"}],"termid":"GO:0140112"}


id: PBO:0052216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 3","termid":"PBO:0052216"}


id: PBO:0088760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase Pcs60","termid":"PBO:0088760"}


id: MONDO:0024634
data:
  {"annotated_genes":["SJAG_01082","SJAG_00980","SJAG_02426","SJAG_04206","SJAG_02231","SJAG_04394","SJAG_04699","SJAG_02187","SJAG_02748","SJAG_02226","SJAG_01837","SJAG_01620","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88312,89164,88314,88315,88318,88317,88313,88316,88319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[88204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[87028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[87476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[87478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[87488,87489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A disease that involves the large intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"large intestine disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0341321","MEDGEN:574315","SCTID:119523007"],"synonyms":[{"name":"disease of large intestine","type":"exact"},{"name":"disease or disorder of large intestine","type":"exact"},{"name":"disorder of large intestine","type":"exact"},{"name":"large intestine disease or disorder","type":"exact"}],"termid":"MONDO:0024634","terms_by_termid":{"MONDO:0005575":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0024634"}}}


id: MONDO:0013023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 12","secondary_identifiers":["UMLS:C2748505","OMIM:612858","MEDGEN:411596","DOID:0080405","MESH:C567548"],"synonyms":[{"name":"OFC12","type":"exact"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 12","type":"related"},{"name":"orofacial cleft 12","type":"exact"}],"termid":"MONDO:0013023","xrefs":{"Monarch":{"xref_id":"0013023"}}}


id: GO:2000209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anoikis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"anoikis","termid":"GO:0043276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anoikis","synonyms":[{"name":"regulation of detachment induced cell death","type":"exact"},{"name":"regulation of suspension induced apoptosis","type":"exact"}],"termid":"GO:2000209"}


id: MONDO:0003255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceptionally rare, generally benign, granular cell tumor that arises from the mediastinum. All the reported cases were located in the posterior mediastinum.","definition_xrefs":["NCIT:C6601"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mediastinal neural neoplasm","termid":"MONDO:0003098"},{"relation_name":"is_a","term_name":"granular cell tumor","termid":"MONDO:0006235"},{"relation_name":"is_a","term_name":"neoplasm of mediastinum","termid":"MONDO:0021386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinal granular cell myoblastoma","secondary_identifiers":["UMLS:C1334656","DOID:5046","MEDGEN:235309"],"synonyms":[{"name":"granular cell myoblastoma of mediastinum","type":"exact"},{"name":"granular cell myoblastoma of the mediastinum","type":"exact"},{"name":"granular cell neoplasm of mediastinum","type":"exact"},{"name":"granular cell neoplasm of the mediastinum","type":"exact"},{"name":"granular cell tumor of mediastinum","type":"exact"},{"name":"granular cell tumor of the mediastinum","type":"exact"},{"name":"granular cell tumour of mediastinum","type":"exact"},{"name":"granular cell tumour of the mediastinum","type":"exact"},{"name":"mediastinal granular cell myoblastoma","type":"exact"},{"name":"mediastinal granular cell neoplasm","type":"exact"},{"name":"mediastinal granular cell tumor","type":"exact"},{"name":"mediastinal granular cell tumour","type":"exact"},{"name":"mediastinum granular cell tumor","type":"exact"},{"name":"mediastinum granular cell tumour","type":"exact"}],"termid":"MONDO:0003255","xrefs":{"Monarch":{"xref_id":"0003255"}}}


id: FYPO:0005281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and contains DNA broken into small fragments when the cell is exposed to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:1594599"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation (obsolete FYPO:0005281)","synonyms":[{"name":"elongated inviable cell with fragmented DNA during cellular response to ionizing radiation","type":"exact"},{"name":"inviable elongated cell with fragmented DNA during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented DNA during cellular response to gamma radiation","type":"narrow"},{"name":"inviable elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus during cellular response to ionizing radiation","type":"related"},{"name":"lethal; elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005281"}


id: MONDO:1011723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission encephalopathy, non-human animal","secondary_identifiers":["OMIA:002551"],"termid":"MONDO:1011723","xrefs":{"Monarch":{"xref_id":"1011723"}}}


id: GO:1905224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form a clathrin-coated pit.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000079","PMID:26589353"],"gene_count":0,"genotype_count":0,"name":"obsolete clathrin-coated pit assembly (obsolete GO:1905224)","synonyms":[{"name":"clathrin-coated pit formation","type":"exact"},{"name":"coated pit assembly","type":"exact"},{"name":"coated pit formation","type":"exact"}],"termid":"GO:1905224"}


id: MONDO:0012782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 13","secondary_identifiers":["MEDGEN:383149","UMLS:C2677601","OMIM:612011"],"synonyms":[{"name":"CELIAC13","type":"exact"},{"name":"celiac disease, susceptibility to, 13","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 13","type":"related"}],"termid":"MONDO:0012782","xrefs":{"Monarch":{"xref_id":"0012782"}}}


id: MONDO:0017716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid and ketone body metabolism","termid":"MONDO:0019223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of carnitine cycle and carnitine transport","secondary_identifiers":["NANDO:1200969","GARD:21320","MEDGEN:1842227","icd11.foundation:890605309","Orphanet:309130","UMLS:C5681080"],"termid":"MONDO:0017716","xrefs":{"Monarch":{"xref_id":"0017716"}}}


id: MONDO:1010484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetralogy of fallot, non-human animal","termid":"MONDO:1010021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, horse","secondary_identifiers":["OMIA:000994-9796"],"termid":"MONDO:1010484","xrefs":{"Monarch":{"xref_id":"1010484"}}}


id: MONDO:0007563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epistaxis, hereditary (obsolete MONDO:0007563)","termid":"MONDO:0007563","xrefs":{"Monarch":{"xref_id":"0007563"}}}


id: PR:O59711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase [NADP(+), L-glutamate-forming] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.03","synonyms":[{"name":"Spom972h-SPBC3B8.03","type":"exact"},{"name":"saccharopine reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59711"}


id: FYPO:0000420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic cytokinesis begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of cytokinesis","synonyms":[{"name":"cytokinesis: delayed","type":"related"},{"name":"delayed cytokinesis","type":"exact"},{"name":"delayed onset of cytokinesis during mitotic cell cycle","type":"related"},{"name":"delayed onset of cytokinesis during vegetative growth","type":"exact"},{"name":"delayed onset of mitotic cytokinesis","type":"exact"}],"termid":"FYPO:0000420"}


id: FYPO:0006875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is abnormal.","definition_xrefs":["PMID:17895368","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","synonyms":[{"name":"abnormal protein localisation to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex of cell end during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell tip cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0006875"}


id: PR:Q9UT98
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pos5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH kinase pos5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.01c","synonyms":[{"name":"Spom972h-pos5","type":"exact"}],"termid":"PR:Q9UT98"}


id: PBO:0075771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF2 pseudogene 1","termid":"PBO:0075771"}


id: GO:0005928
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cell-substrate adherens junction found in the apical region of a cell, such as those found in cuticle-secreting epithelia, which connect the apical membrane to the cuticle.","definition_xrefs":["PMID:11700298","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete apical hemi-adherens junction (obsolete GO:0005928)","synonyms":[{"name":"apical cell-substrate adherens junction","type":"exact"},{"name":"apical dense plaque","type":"exact"}],"termid":"GO:0005928"}


id: PBO:0059700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 8","termid":"PBO:0059700"}


id: PBO:0080166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 1","termid":"PBO:0080166"}


id: PBO:0087010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease H2 catalytic subunit; removes RNA primers during Okazaki fragment synthesis and errant ribonucleotides misincorporated during DNA replication; role in ribonucleotide excision repair; homolog of RNAse HI; related to human AGS4 which causes Aicardi-Goutieres syndrome","termid":"PBO:0087010"}


id: GO:0098802
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"}]},"cv_name":"cellular_component","definition":"Any protein complex that is part of the plasma membrane and which functions as a signaling receptor.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane signaling receptor complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0098802","terms_by_termid":{"GO:0038038":null}}


id: GO:0006926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any apoptotic process in a cell infected with a virus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete virus-infected cell apoptotic process (obsolete GO:0006926)","synonyms":[{"name":"apoptosis of virus-infected cells","type":"exact"},{"name":"killing virus-infected cells","type":"exact"},{"name":"programmed cell death of virus-infected cells by apoptosis","type":"exact"},{"name":"programmed cell death, virus-infected cells","type":"exact"},{"name":"virus-infected cell apoptosis","type":"narrow"},{"name":"virus-infected cell apoptotic process","type":"exact"},{"name":"virus-infected cell programmed cell death by apoptosis","type":"exact"}],"termid":"GO:0006926"}


id: PBO:0042114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 186","termid":"PBO:0042114"}


id: FYPO:0001791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body duplication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body duplication","synonyms":[{"name":"abnormal mitotic SPB duplication","type":"exact"},{"name":"abnormal mitotic spindle pole body duplication during vegetative growth","type":"exact"},{"name":"abnormal spindle pole body duplication during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001791"}


id: PATO:0000249
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000249 righting reflex (obsolete PATO:0000249)","termid":"PATO:0000249"}


id: GO:1902758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bis(molybdopterin guanine dinucleotide)molybdenum.","definition_xrefs":["GO_REF:0000068","PMID:23201473","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor biosynthetic process","termid":"GO:0006777"},{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolic process","termid":"GO:1902757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"bis(molybdopterin guanine dinucleotide)molybdenum biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5964","GO:0061600"],"synonyms":[{"name":"bis(molybdopterin guanine dinucleotide)molybdenum anabolism","type":"exact"},{"name":"bis(molybdopterin guanine dinucleotide)molybdenum biosynthesis","type":"exact"},{"name":"bis(molybdopterin guanine dinucleotide)molybdenum formation","type":"exact"},{"name":"bis(molybdopterin guanine dinucleotide)molybdenum synthesis","type":"exact"},{"name":"bis-Mo-molybdopterin-guanine dinucleotide cofactor biosynthetic process","type":"exact"}],"termid":"GO:1902758"}


id: MONDO:0100479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of drug-resistant tuberculosis that is resisant to rifampicin with or without resistance to other antitubercular medications.","definition_xrefs":["PMID:25918181","PMID:29319042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug-resistant tuberculosis","termid":"MONDO:0041806"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rifampicin-resistant tuberculosis","secondary_identifiers":["UMLS:C1532782","MEDGEN:735456"],"synonyms":[{"name":"RR-TB","type":"exact"},{"name":"rifampicin-resistant TB","type":"exact"}],"termid":"MONDO:0100479","xrefs":{"Monarch":{"xref_id":"0100479"}}}


id: FYPO:0001216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of a SAGA complex onto chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal SAGA complex assembly","synonyms":[{"name":"normal SAGA complex assembly during mitotic cell cycle","type":"related"},{"name":"normal SAGA complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001216"}


id: GO:0018856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxo-3-phenylpropionate + CoA + ATP = AMP + diphosphate + benzoyl acetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"benzoyl acetate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R05452","SABIO-RK:5058"],"termid":"GO:0018856"}


id: FYPO:0001121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell shape is altered, but cell size remains normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000005","FYPO:0000257","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"abnormal cell shape, normal cell size during vegetative growth","type":"exact"},{"name":"lumpy","type":"related"},{"name":"vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001121"}


id: MONDO:0004394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the mucosal epithelial surface of the maxillary sinus. Patients may present with nasal fullness, obstruction, and/or epistaxis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maxillary sinus carcinoma","termid":"MONDO:0001748"},{"relation_name":"is_a","term_name":"oral cavity squamous cell carcinoma","termid":"MONDO:0004958"},{"relation_name":"is_a","term_name":"paranasal sinus squamous cell carcinoma","termid":"MONDO:0044705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"maxillary sinus squamous cell carcinoma","secondary_identifiers":["DOID:7910","NCIT:C6064","SCTID:707354003","MEDGEN:277348","UMLS:C1334647"],"synonyms":[{"name":"epidermoid carcinoma of maxillary antrum","type":"exact"},{"name":"epidermoid carcinoma of maxillary sinus","type":"exact"},{"name":"epidermoid carcinoma of maxillofacial sinus","type":"exact"},{"name":"epidermoid carcinoma of the maxillary antrum","type":"exact"},{"name":"epidermoid carcinoma of the maxillary sinus","type":"exact"},{"name":"epidermoid carcinoma of the maxillofacial sinus","type":"exact"},{"name":"maxillary antrum epidermoid carcinoma","type":"exact"},{"name":"maxillary antrum squamous cell carcinoma","type":"exact"},{"name":"maxillary sinus epidermoid carcinoma","type":"exact"},{"name":"maxillary sinus squamous cell carcinoma","type":"exact"},{"name":"maxillofacial sinus epidermoid carcinoma","type":"exact"},{"name":"maxillofacial sinus squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of maxillary antrum","type":"exact"},{"name":"squamous cell carcinoma of maxillary sinus","type":"exact"},{"name":"squamous cell carcinoma of maxillofacial sinus","type":"exact"},{"name":"squamous cell carcinoma of the maxillary antrum","type":"exact"},{"name":"squamous cell carcinoma of the maxillary sinus","type":"exact"},{"name":"squamous cell carcinoma of the maxillofacial sinus","type":"exact"}],"termid":"MONDO:0004394","xrefs":{"Monarch":{"xref_id":"0004394"}}}


id: PBO:0081139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP36 ring finger protein like 2","termid":"PBO:0081139"}


id: PBO:0111798
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain","termid":"PBO:0111798"}


id: PBO:0091486
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glcoside Hydrolase family Sixteen","termid":"PBO:0091486"}


id: GO:0036075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ossification that requires the replacement of a preexisting tissue prior to bone tissue formation.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"replacement ossification","synonyms":[{"name":"indirect ossification","type":"exact"}],"termid":"GO:0036075"}


id: PBO:0079204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSR2 ribosome maturation factor","termid":"PBO:0079204"}


id: PBO:0005397
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible false positive domain, EF hand","termid":"PBO:0005397"}


id: PBO:0061054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipsnap homolog 2","termid":"PBO:0061054"}


id: PBO:0027298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_primary_amine_oxidase_activity","termid":"PBO:0027298"}


id: PBO:0082976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic thioredoxin isoenzyme; part of the thioredoxin system that protects cells from oxidative and reductive stress; subunit of the LMA1 complex, with Pbi2p, that promotes vacuole inheritance; cofactor for Tsa1p; required for ER-Golgi transport; facilitates mitochondrial import of small Tims (Tim9p, Tim10p, Tim13p) by maintaining them in reduced form along with Trx2p; component of a signal transduction redox relay in a light sensing pathway; abundance increases under DNA replication stress","termid":"PBO:0082976"}


id: GO:0042325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"regulates","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphorylation","termid":"GO:0042325"}


id: PBO:0061759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase 2","termid":"PBO:0061759"}


id: PR:O14198
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.05","synonyms":[{"name":"RNA polymerase II mediator complex protein pmc6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-med18","type":"exact"},{"name":"cell separation protein sep11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator complex subunit 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14198"}


id: PBO:0030726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-filamentous_actin_absent","termid":"PBO:0030726"}


id: PBO:0080254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 17 pseudogene","termid":"PBO:0080254"}


id: GO:0018203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-isoleucine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-isoleucine modification","termid":"GO:0018203"}


id: FYPO:0003035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to ultraviolet light is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to UV","synonyms":[{"name":"normal RNA accumulation during cellular response to UV","type":"related"},{"name":"normal RNA level during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to UV","type":"narrow"},{"name":"normal protein level during cellular response to ultraviolet light","type":"exact"},{"name":"normal transcript level during cellular response to UV","type":"exact"}],"termid":"FYPO:0003035"}


id: PBO:0003683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan Meu25","termid":"PBO:0003683"}


id: MONDO:0007509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypohidrotic ectodermal dysplasia","termid":"MONDO:0015884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 10A, hypohidrotic/hair/nail type, autosomal dominant","secondary_identifiers":["DOID:0111663","GARD:18591","MEDGEN:854747","OMIM:129490","UMLS:C3888065"],"synonyms":[{"name":"ECTD10A","type":"related"},{"name":"ectodermal dysplasia 10A, hypohidrotic/hair/nail type, autosomal dominant","type":"exact"},{"name":"ectodermal dysplasia hypohidrotic autosomal dominant","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic, autosomal dominant","type":"related"},{"name":"hypohidrotic ectodermal dysplasia autosomal dominant","type":"related"}],"termid":"MONDO:0007509","xrefs":{"Monarch":{"xref_id":"0007509"}}}


id: PBO:0026672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_plus-end_directed_mitotic_chromosome_migration","termid":"PBO:0026672"}


id: MONDO:0009349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most severe form of holoprosencephaly in which there is a complete absence of midline forebrain division resulting in the presence of fused hemispheres and a single ventricle (alobar holoprosencephaly). It is mapped to chromosome 21q22.","definition_xrefs":["NCIT:C75476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 1","secondary_identifiers":["OMIM:236100","UMLS:C0266667","DOID:0110881","MEDGEN:78617"],"synonyms":[{"name":"Demyer sequence","type":"related"},{"name":"HPE1","type":"exact"},{"name":"Hpe, familial","type":"broad"},{"name":"arhinencephaly","type":"related"},{"name":"cyclopia","type":"broad"},{"name":"holoprosencephaly 1","type":"exact"},{"name":"holoprosencephaly 1, isolated cases","type":"exact"},{"name":"holoprosencephaly type 1","type":"exact"},{"name":"holoprosencephaly, familial Alobar","type":"related"},{"name":"isolated arhinencephaly","type":"related"}],"termid":"MONDO:0009349","xrefs":{"Monarch":{"xref_id":"0009349"}}}


id: GO:0008519
data:
  {"annotated_genes":["SJAG_04136","SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71585,77144],"is_not":false,"summary":null,"term":"GO:0008519"}]},"cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of ammonium through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:17710640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04136":null,"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ammonium channel activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0051739","Reactome:R-HSA-444416","Reactome:R-HSA-444419","Reactome:R-HSA-446277","Reactome:R-HSA-444393","TC:1.A.11","MetaCyc:RXN-9615","Reactome:R-HSA-5623051","Reactome:R-HSA-446278","GO:0015251"],"synonyms":[{"name":"ammonia transmembrane transporter activity","type":"broad"},{"name":"ammonium transmembrane transporter activity","type":"broad"}],"termid":"GO:0008519","terms_by_termid":{"GO:0008519":null}}


id: PBO:0082727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rix1 complex and possibly pre-replicative complexes; required for processing of ITS2 sequences from 35S pre-rRNA; component of the pre-60S ribosomal particle with the dynein-related AAA-type ATPase Mdn1p; required for pre-replicative complex (pre-RC) formation and maintenance during DNA replication licensing; relocalizes to the cytosol in response to hypoxia; essential gene","termid":"PBO:0082727"}


id: MONDO:0010134
data:
  {"annotated_genes":["SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87524,87525],"is_not":false,"summary":null,"term":"MONDO:0010134"}]},"cv_name":"mondo","definition":"Pendred syndrome (PDS) is a clinically variable genetic disorder characterized by bilateral sensorineural hearing loss and euthyroid goiter.","definition_xrefs":["Orphanet:705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital hypothyroidism","termid":"MONDO:0018612"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Pendred syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C121745","NORD:2030","DOID:0060744","OMIM:274600","MEDGEN:82890","MESH:C536648","SCTID:70348004","icd11.foundation:1156056623","GARD:4271","UMLS:C0271829"],"synonyms":[{"name":"PDS","type":"related"},{"name":"Pendred syndrome","type":"exact"},{"name":"TDH2B","type":"exact"},{"name":"autosomal recessive sensorineural hearing impairment and goiter","type":"related"},{"name":"autosomal recessive sensorineural hearing impairment and goitre","type":"related"},{"name":"congenital hypothyroidism due to dyshormonogenesis 2B","type":"exact"},{"name":"deafness with goiter","type":"exact"},{"name":"deafness with goitre","type":"exact"},{"name":"genetic defect in thyroid hormonogenesis 2B","type":"exact"},{"name":"goiter-deafness syndrome","type":"exact"},{"name":"hypothyroidism, congenital, due to dyshormonogenesis, 2B","type":"exact"},{"name":"thyroid dyshormonogenesis 2B","type":"exact"},{"name":"thyroid hormonogenesis, genetic defect in, 2B","type":"exact"}],"termid":"MONDO:0010134","terms_by_termid":{"MONDO:0010134":null},"xrefs":{"Monarch":{"xref_id":"0010134"}}}


id: PATO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a population by virtue of some of it's members' ability to survive.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-viable","termid":"PATO:0001770"}


id: PBO:0004708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pet117 cytochrome c oxidase assemby protein (predicted)","termid":"PBO:0004708"}


id: PBO:0084446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannitol dehydrogenase; deletion suppresses mutation of mpt5; DSF1 has a paralog, MAN2, that arose from a segmental duplication","termid":"PBO:0084446"}


id: PBO:0073757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 11","termid":"PBO:0073757"}


id: MONDO:1010540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyloric stenosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyloric stenosis, non-human animal","termid":"MONDO:1010040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyloric stenosis, domestic cat","secondary_identifiers":["OMIA:000843-9685"],"termid":"MONDO:1010540","xrefs":{"Monarch":{"xref_id":"1010540"}}}


id: GO:1990091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sodium-dependent hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.","definition_xrefs":["PMID:20460380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self proteolysis","termid":"GO:0097264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sodium-dependent self proteolysis","termid":"GO:1990091"}


id: PBO:0076709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 7 like 2","termid":"PBO:0076709"}


id: GO:0001059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of RNA from a DNA template by RNA polymerase IV, originating at a Pol IV-specific promoter.","definition_xrefs":["GOC:txnOH","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"transcription by RNA polymerase IV","synonyms":[{"name":"transcription from RNA pol IV promoter","type":"exact"},{"name":"transcription from RNA polymerase IV promoter","type":"exact"}],"termid":"GO:0001059"}


id: GO:0034702
data:
  {"annotated_genes":["SJAG_MIT09","SJAG_03925","SJAG_03114","SJAG_00915","SJAG_00438","SJAG_02105","SJAG_MIT15","SJAG_00133","SJAG_02598","SJAG_00985","SJAG_04122","SJAG_MIT37","SJAG_07003","SJAG_02564","SJAG_05229","SJAG_00836","SJAG_00542","SJAG_05204"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66191,79611,68382,96722,109855,71938,65455,58017,68599,60322,117847,121092,121103,74514,121098,65141,105600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045259"},{"annotations":[76231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective monoatomic ion transport down its electrochemical gradient.","definition_xrefs":["ISBN:071673706X","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"monoatomic ion channel complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0034702","terms_by_termid":{"GO:0005891":null,"GO:0045259":null}}


id: GO:1905716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cornification.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26014679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of cornification","termid":"GO:1905715"},{"relation_name":"negatively_regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cornification","synonyms":[{"name":"down regulation of cornification","type":"exact"},{"name":"down-regulation of cornification","type":"exact"},{"name":"downregulation of cornification","type":"exact"},{"name":"inhibition of cornification","type":"narrow"}],"termid":"GO:1905716"}


id: PBO:0063579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PERP pseudogene 2","termid":"PBO:0063579"}


id: MONDO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fluid collection within the pericardial sac, usually due to inflammation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericardium disorder","termid":"MONDO:0000474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pericardial effusion","secondary_identifiers":["icd11.foundation:2002014072","DOID:118","MESH:D010490","UMLS:C0031039","SCTID:373945007","HP:0001698","NCIT:C3319","MEDGEN:10653"],"synonyms":[{"name":"fluid, pericardial","type":"exact"},{"name":"pericardial effusion","type":"exact"},{"name":"pericardial effusion (disease)","type":"exact"},{"name":"pericardial fluid","type":"exact"}],"termid":"MONDO:0001370","xrefs":{"Monarch":{"xref_id":"0001370"}}}


id: MONDO:0004307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition characterized by diffuse spread of sarcoma cells throughout the meninges. The neoplastic cells are derived from meningeal connective tissue. Clinically, this disorder may present as a fulminant pachymeningitis and/or encephalitis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningeal sarcoma","termid":"MONDO:0004308"},{"relation_name":"is_a","term_name":"sarcomatosis","termid":"MONDO:0004309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcomatosis of the meninges","secondary_identifiers":["ICDO:9539/3","MEDGEN:83175","UMLS:C0334612","NCIT:C4334","DOID:7613"],"synonyms":[{"name":"meningeal cluster sarcomatosis","type":"exact"},{"name":"meningeal sarcomatosis","type":"exact"},{"name":"meningeal sarcomatosis (morphologic abnormality)","type":"exact"},{"name":"meninges sarcomatosis","type":"exact"},{"name":"sarcomatosis of meninges","type":"exact"},{"name":"sarcomatosis of the meninges","type":"exact"}],"termid":"MONDO:0004307","xrefs":{"Monarch":{"xref_id":"0004307"}}}


id: GO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the autophagosome double-membrane.","definition_xrefs":["GOC:autophagy","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"autophagosome","termid":"GO:0005776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"autophagosome lumen","synonyms":[{"name":"autophagic vacuole lumen","type":"exact"}],"termid":"GO:0034423"}


id: MONDO:0019897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 12","termid":"MONDO:0016877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 12q","secondary_identifiers":["UMLS:C5438460","MEDGEN:1761314","GARD:19328","Orphanet:96149"],"synonyms":[{"name":"distal deletion 12q","type":"exact"},{"name":"distal monosomy type 12q","type":"exact"},{"name":"monosomy 12qter","type":"exact"},{"name":"telomeric deletion 12q","type":"exact"}],"termid":"MONDO:0019897","xrefs":{"Monarch":{"xref_id":"0019897"}}}


id: MONDO:0040679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm derived from the transitional epithelium of the urinary tract (urinary bladder, ureter, urethra, or renal pelvis). It is frequently papillary.","definition_xrefs":["NCIT:C4030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant urinary system neoplasm","termid":"MONDO:0006295"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"},{"relation_name":"is_a","term_name":"urothelial neoplasm","termid":"MONDO:0024337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urothelial carcinoma","secondary_identifiers":["MEDGEN:760495","EFO:0008528","UMLS:C2145472"],"synonyms":[{"name":"Uroepithelial carcinoma","type":"exact"},{"name":"transitional cell car. -uroth.","type":"exact"},{"name":"transitional cell carcinoma of the urinary tract","type":"exact"},{"name":"transitional cell carcinoma of the urothelial tract","type":"exact"},{"name":"urothelial carcinoma","type":"exact"}],"termid":"MONDO:0040679","xrefs":{"Monarch":{"xref_id":"0040679"}}}


id: FYPO:0000743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch internalization is abnormal. Actin cortical patch internalization is the process in which the patch moves from the cell surface to the inside of the cell.","definition_xrefs":["PMID:21620704","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0004803","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cortical patch internalization","synonyms":[{"name":"abnormal F-actin patch internalization","type":"exact"},{"name":"abnormal actin cortical patch internalisation","type":"exact"},{"name":"abnormal actin cortical patch internalization during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch internalization during vegetative growth","type":"exact"},{"name":"abnormal actin patch internalization","type":"exact"}],"termid":"FYPO:0000743"}


id: PBO:0057008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 100","termid":"PBO:0057008"}


id: GO:0070358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the controlled movement of a bacterial cell powered by the continuous polymerization of actin at one pole of the cell.","definition_xrefs":["PMID:15773977","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin polymerization-dependent cell motility","synonyms":[{"name":"cell motility by actin tail formation","type":"exact"}],"termid":"GO:0070358"}


id: MONDO:0021462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the rectum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal neoplasm","termid":"MONDO:0002165"},{"relation_name":"is_a","term_name":"benign neoplasm of large intestine","termid":"MONDO:0021444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of rectum","secondary_identifiers":["icd11.foundation:1805730142","ICD10CM:D12.8","UMLS:C0496867","MEDGEN:99222","NCIT:C4774","SCTID:92318000"],"synonyms":[{"name":"benign neoplasm of the rectum","type":"exact"},{"name":"benign rectal neoplasm","type":"exact"},{"name":"benign rectal neoplasms","type":"exact"},{"name":"benign rectal tumor","type":"exact"},{"name":"benign rectal tumors","type":"exact"},{"name":"benign rectal tumour","type":"exact"},{"name":"benign rectal tumours","type":"exact"},{"name":"benign tumor of rectum","type":"exact"},{"name":"benign tumor of the rectum","type":"exact"},{"name":"benign tumour of rectum","type":"exact"},{"name":"benign tumour of the rectum","type":"exact"},{"name":"rectal neoplasms, benign","type":"exact"},{"name":"rectal tumors, benign","type":"exact"},{"name":"rectum benign neoplasm","type":"exact"}],"termid":"MONDO:0021462","xrefs":{"Monarch":{"xref_id":"0021462"}}}


id: GO:0035145
data:
  {"annotated_genes":["SJAG_04025","SJAG_01852","SJAG_02879","SJAG_00888","SJAG_01252","SJAG_05014"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72235,78967,82014,94222,105081,107832],"is_not":false,"summary":null,"term":"GO:0035145"}]},"cv_name":"cellular_component","definition":"A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.","definition_xrefs":["PMID:11743026","PMID:11532962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_01252":null,"SJAG_01852":null,"SJAG_02879":null,"SJAG_04025":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"exon-exon junction complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"EJC","type":"exact"},{"name":"exon junction complex","type":"exact"}],"termid":"GO:0035145","terms_by_termid":{"GO:0035145":null}}


id: PBO:0108964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 1A","termid":"PBO:0108964"}


id: GO:0072573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction directed at lipopolysaccharide antigens.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"},{"relation_name":"is_a","term_name":"negative regulation of lipopolysaccharide-mediated signaling pathway","termid":"GO:0031665"},{"relation_name":"part_of","term_name":"cellular response to lipopolysaccharide","termid":"GO:0071222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"tolerance induction to lipopolysaccharide","synonyms":[{"name":"tolerance induction to LPS","type":"exact"},{"name":"tolerance induction to endotoxin","type":"broad"}],"termid":"GO:0072573"}


id: PBO:0044363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 52","termid":"PBO:0044363"}


id: GO:0060373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the depolarizing direction away from the resting potential in a ventricular cardiomyocyte.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ventricular cardiac muscle cell membrane depolarization","synonyms":[{"name":"electrocardiogram QRS complex","type":"related"},{"name":"regulation of ventricular cardiomyocyte membrane depolarization","type":"exact"},{"name":"ventricular depolarization","type":"related"}],"termid":"GO:0060373"}


id: MONDO:0010939
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87182],"is_not":false,"summary":null,"term":"MONDO:0010939"}]},"cv_name":"mondo","definition":"Low phospholipid associated cholelithiasis is a rare genetic hepatic disease characterized by cholesterol gallstones and intrahepatic stones developing before the age of 40 years.","definition_xrefs":["Orphanet:69663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystitis","termid":"MONDO:0002155"},{"relation_name":"is_a","term_name":"hereditary gallbladder disorder","termid":"MONDO:0700225"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"low phospholipid associated cholelithiasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10068936","UMLS:C2609268","icd11.foundation:1261516421","MEDGEN:760527","SCTID:715577009","OMIM:600803","GARD:16683"],"synonyms":[{"name":"ABCB4 gene mutation-associated cholelithiasis","type":"exact"},{"name":"GBD1","type":"related"},{"name":"LPAC","type":"exact"},{"name":"cholelithiasis with ABCB4 gene mutation","type":"exact"},{"name":"cholelithiasis, Low phospholipid-associated","type":"related"},{"name":"gallbladder disease 1","type":"related"},{"name":"gallbladder disease type 1","type":"exact"}],"termid":"MONDO:0010939","terms_by_termid":{"MONDO:0010939":null},"xrefs":{"Monarch":{"xref_id":"0010939"}}}


id: GO:0031823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1D serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1D serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 1D receptor binding","type":"exact"},{"name":"type 1D serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031823"}


id: PR:Q10076
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsr1 gene.","definition_xrefs":["UniProtKB:Q10076","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrogen peroxide stress regulator 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.11","synonyms":[{"name":"Spom972h-hsr1","type":"exact"}],"termid":"PR:Q10076"}


id: GO:0080054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrate ions (NO3-) from one side of a membrane to the other. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["PMID:19050168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate transmembrane transporter activity","termid":"GO:0015112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"low-affinity nitrate transmembrane transporter activity","synonyms":[{"name":"low affinity nitrate transmembrane transporter activity","type":"exact"}],"termid":"GO:0080054"}


id: FYPO:0003473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, producing inviable daughter cells, and in which the septum forms in a position that partitions both nuclei into one compartment, when the cell is subject to salt stress. Cell separation may or may not be completed.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoseptate vegetative cell with binucleate and anucleate compartments","termid":"FYPO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"septation following abnormal chromosome segregation, with binucleate and anucleate compartment formation during cellular response to salt stress","synonyms":[{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"septation following abnormal chromosome segregation, with binucleate cell formation during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003473"}


id: GO:0046408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorophyllide a + phytyl diphosphate + 2 H+ = chlorophyll a + diphosphate.","definition_xrefs":["RHEA:17317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chlorophyll synthetase activity","secondary_identifiers":["EC:2.5.1.62","KEGG_REACTION:R06284","GO:0043787","MetaCyc:RXN1F-66"],"synonyms":[{"name":"chlorophyll synthase activity","type":"exact"},{"name":"chlorophyllide-a:phytyl-diphosphate phytyltransferase activity","type":"exact"}],"termid":"GO:0046408"}


id: PBO:0040157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit 3","termid":"PBO:0040157"}


id: GO:0032114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucose-6-phosphatase activity, the catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate.","definition_xrefs":["GOC:kp"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucose-6-phosphatase activity (obsolete GO:0032114)","termid":"GO:0032114"}


id: GO:0090230
data:
  {"annotated_genes":["SJAG_04638","SJAG_03048","SJAG_00718","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[104293,91494,118680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of centromere complex assembly, the aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"centromere complex assembly","termid":"GO:0034508"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of centromere complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere licensing","type":"related"}],"termid":"GO:0090230","terms_by_termid":{"GO:1905560":null,"GO:1905561":null}}


id: GO:0032974
data:
  {"annotated_genes":["SJAG_03899","SJAG_03400","SJAG_00051"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78858],"is_not":false,"summary":null,"term":"GO:0032974"},{"annotations":[92240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[99245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[99246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"}]},"cv_name":"biological_process","definition":"The directed movement of amino acids out of the vacuole, across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_03400":null,"SJAG_03899":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"amino acid transmembrane export from vacuole","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino acid efflux from vacuole","type":"exact"},{"name":"vacuolar amino acid export","type":"exact"}],"termid":"GO:0032974","terms_by_termid":{"GO:0032974":null,"GO:0034488":null,"GO:0089707":null,"GO:0089708":null,"GO:1990818":null}}


id: GO:0010026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epidermal cell acquires the specialized features of a trichome cell. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","PMID:9367433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"plant epidermis development","termid":"GO:0090558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichome differentiation","secondary_identifiers":["GO:0048271"],"synonyms":[{"name":"trichome cell differentiation","type":"exact"}],"termid":"GO:0010026"}


id: PBO:0061757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acyl-ADP-ribose deacylase 1","termid":"PBO:0061757"}


id: PR:Q09330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THO complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export protein mlo3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.04","secondary_identifiers":["UniProtKB:Q09330"],"synonyms":[{"name":"RNA-annealing protein mlo3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1D7.04","type":"related"},{"name":"Spom972h-ALYREF","type":"exact"}],"termid":"PR:Q09330"}


id: FYPO:0006989
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121467,121468],"is_not":false,"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[121460],"is_not":false,"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 is normal (i.e. indistinguishable from wild type) at transposable elements.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"normal histone H3-K9 dimethylation at transposable element during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal histone H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at transposable element during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 dimethylation at transposon during vegetative growth","type":"exact"},{"name":"normal histone H3K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"normal histone H3K9me2 at transposable element during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"}],"termid":"FYPO:0006989","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: MONDO:0011402
data:
  {"annotated_genes":["SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88618],"is_not":false,"summary":null,"term":"MONDO:0011402"}]},"cv_name":"mondo","definition":"Congenital Cataracts Facial Dysmorphism Neuropathy (CCFDN) syndrome is a complex developmental disorder of autosomal recessive inheritance.","definition_xrefs":["Orphanet:48431"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic epicanthus (obsolete MONDO:0020165)","termid":"MONDO:0020165"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 16","termid":"MONDO:0016949"},{"relation_name":"is_a","term_name":"autosomal recessive degenerative and progressive cerebellar ataxia","termid":"MONDO:0020046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"congenital cataracts-facial dysmorphism-neuropathy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:702433001","GARD:16645","ICD9:759.89","MEDGEN:346973","OMIM:604168","MESH:C565822","UMLS:C1858726"],"synonyms":[{"name":"CCFDN","type":"exact"},{"name":"cataract, congenital, with Facial Dysmorphism and neuropathy","type":"related"},{"name":"congenital cataracts, facial dysmorphism, and neuropathy","type":"related"},{"name":"congenital cataracts-facial dysmorphism-neuropathy syndrome","type":"exact"}],"termid":"MONDO:0011402","terms_by_termid":{"MONDO:0011402":null},"xrefs":{"Monarch":{"xref_id":"0011402"}}}


id: MONDO:1040052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by autosomal recessive variants in the PROM1 gene.","definition_xrefs":["PMID:38072963","PMID:10587575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"PROM1-related retinopathy","termid":"MONDO:1040056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"PROM1-related recessive retinopathy","synonyms":[{"name":"PROM1-related recessive retinopathy","type":"exact"}],"termid":"MONDO:1040052","xrefs":{"Monarch":{"xref_id":"1040052"}}}


id: PBO:0069262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 518, pseudogene","termid":"PBO:0069262"}


id: MONDO:0044872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic disorder, affecting the sympathetic or parasympathetic nervous system. It can be primary, the result of central nervous system degeneration, or secondary due to diabetes or alcoholism. Patients with the chronic form of this disorder usually have a progressive clinical course and a poor prognosis.","definition_xrefs":["NCIT:C53439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia","secondary_identifiers":["MEDGEN:8511","UMLS:C0013363"],"synonyms":[{"name":"dysautonomia","type":"exact"}],"termid":"MONDO:0044872","xrefs":{"Monarch":{"xref_id":"0044872"}}}


id: PBO:0002633
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.46","termid":"PBO:0002633"}


id: PBO:0063231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 17","termid":"PBO:0063231"}


id: MONDO:0009149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia-intellectual disability-central nervous system malformation syndrome is a rare, multiple developmental anomalies syndrome characterized by the triad of ectodermal dysplasia (mostly hypohidrotic with dry skin and reduced sweating and sparse, fair scalp hair, eyebrows and eyelashes), severe intellectual disability and variable central nervous system anomalies (cerebellar hypoplasia, dilatation of ventricles, corpus callosum agenesis, Dandy-Walker malformation). Distinct craniofacial dysmorphism with macrocephaly, frontal bossing, midfacial hypoplasia and high arched or cleft palate, as well as cryptorchidism, feeding difficulties and hypotonia, are associated. There have been no further descriptions in the literature since 1998.","definition_xrefs":["Orphanet:1812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia-intellectual disability-central nervous system malformation syndrome","secondary_identifiers":["MEDGEN:347363","MESH:C565605","OMIM:225040","UMLS:C1857053","GARD:16578"],"synonyms":[{"name":"ectodermal dysplasia, hypohidrotic, with hypothyroidism and agenesis of the corpus callosum","type":"related"}],"termid":"MONDO:0009149","xrefs":{"Monarch":{"xref_id":"0009149"}}}


id: PBO:0064099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 1","termid":"PBO:0064099"}


id: _global:adjacent_to
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A geometric operator, specified in Egenhofer 1989. Two features meet if they share a junction on the sequence. X adjacent_to Y iff X and Y share a boundary but do not overlap.","definition_xrefs":["PMID:20226267","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"spatially_disjoint_from","termid":"_global:spatially_disjoint_from"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adjacent_to","secondary_identifiers":["RO:0002220"],"synonyms":[{"name":"adjacent to","type":"exact"}],"termid":"_global:adjacent_to"}


id: PATO:0001899
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A circumference which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"circumference","termid":"PATO:0001648"},{"relation_name":"is_a","term_name":"decreased perimeter","termid":"PATO:0001713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased circumference","termid":"PATO:0001899"}


id: PBO:0111535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Nrg1","termid":"PBO:0111535"}


id: PBO:0064593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member M","termid":"PBO:0064593"}


id: FYPO:0002616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to pre-autophagosomal structure","synonyms":[{"name":"increased protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"increased protein localization to PAS","type":"exact"},{"name":"increased protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"increased protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002616"}


id: PBO:0054093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1446","termid":"PBO:0054093"}


id: MONDO:0016080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital respiratory-biliary fistula (RBF) is a rare developmental defect characterized by an anomalous connection of trachea or bronchus with left hepatic duct presenting with respiratory distress, recurrent respiratory infections and biliary expectoration or vomitus.","definition_xrefs":["Orphanet:2040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital bronchobiliary fistula","secondary_identifiers":["MEDGEN:930385","GARD:1475","icd11.foundation:420429663","UMLS:C4304716","SCTID:719452004"],"termid":"MONDO:0016080","xrefs":{"Monarch":{"xref_id":"0016080"}}}


id: PBO:0050586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HS6ST2 antisense RNA 1","termid":"PBO:0050586"}


id: PBO:0065853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 4","termid":"PBO:0065853"}


id: FYPO:0003662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via an error-free mechanism, such as homologous recombination or break-induced replication, is increased.","definition_xrefs":["PMID:10373582","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"increased error-free double-strand break repair","synonyms":[{"name":"increased error-free double-strand break repair during mitotic cell cycle","type":"related"},{"name":"increased error-free double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0003662"}


id: PBO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21 (predicted)","termid":"PBO:0002037"}


id: PBO:0017496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family transmembrane transporter Mfs2 (predicted)","termid":"PBO:0017496"}


id: GO:0051058
data:
  {"annotated_genes":["SJAG_00883","SJAG_02169","SJAG_01386","SJAG_01790","SJAG_04455","SJAG_00229","SJAG_03508","SJAG_04462","SJAG_03353","SJAG_02514","SJAG_06270","SJAG_01464","SJAG_02379","SJAG_04943","SJAG_03681","SJAG_00526","SJAG_03592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[73305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[101490,94790,74682,97519,103186,106980,93591,109182,117906,92573,94705,109048,95319,109493,112141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of small GTPase mediated signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02514":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of small GTPase mediated signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"down-regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"downregulation of small GTPase mediated signal transduction","type":"exact"},{"name":"inhibition of small GTPase mediated signal transduction","type":"narrow"},{"name":"negative regulation of small GTPase-mediated signal transduction","type":"exact"}],"termid":"GO:0051058","terms_by_termid":{"GO:0031030":null,"GO:0035024":null,"GO:0046580":null}}


id: GO:0110137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of imaginal disc-derived leg joint morphogenesis, the process in which the anatomical structure of the imaginal disc-derived leg joint is generated and organized.","definition_xrefs":["PMID:25329825","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"imaginal disc-derived leg morphogenesis","termid":"GO:0007480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc-derived leg joint morphogenesis","termid":"GO:0110137"}


id: PBO:0047604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile histidine triad diadenosine triphosphatase","termid":"PBO:0047604"}


id: PBO:0069951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1244, pseudogene","termid":"PBO:0069951"}


id: PBO:0079079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-7","termid":"PBO:0079079"}


id: PBO:0065439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 12","termid":"PBO:0065439"}


id: MONDO:0022775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip and palate malrotation cardiopathy","termid":"MONDO:0022775","xrefs":{"Monarch":{"xref_id":"0022775"}}}


id: PBO:0090070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Cox16","termid":"PBO:0090070"}


id: GO:1901478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of amitrole from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"aminotriazole transmembrane transporter activity","secondary_identifiers":["GO:0015241"],"synonyms":[{"name":"aminotriazole transporter activity","type":"broad"}],"termid":"GO:1901478"}


id: PBO:0017062
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"~37 copies of a 7-10 repeat consensus 'PMEEITTMTI' and a S/N rich C terminal region","termid":"PBO:0017062"}


id: GO:0120170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an intraciliary transport particle B (IFT B) complex.","definition_xrefs":["PMID:20889716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"intraciliary transport particle B binding","synonyms":[{"name":"IFT B complex binding","type":"related"},{"name":"intraciliary transport complex B binding","type":"exact"},{"name":"intraflagellar transport complex B binding","type":"exact"},{"name":"intraflagellar transport particle B binding","type":"exact"}],"termid":"GO:0120170"}


id: GO:0042088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 type immune response","synonyms":[{"name":"Th1 immune response","type":"exact"}],"termid":"GO:0042088"}


id: PBO:0064623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrophosphatase (inorganic) 1 pseudogene","termid":"PBO:0064623"}


id: PBO:0055659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3099","termid":"PBO:0055659"}


id: MONDO:0011622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrolithiasis, uric acid, susceptibility to","secondary_identifiers":["OMIM:605990","UMLS:C2700426","MEDGEN:397793"],"synonyms":[{"name":"UAN","type":"related"},{"name":"nephrolithiasis, uric acid, susceptibility to","type":"exact"},{"name":"susceptibility to uric acid nephrolithiasis","type":"related"},{"name":"urolithiasis, uric acid, susceptibility to","type":"related"}],"termid":"MONDO:0011622","xrefs":{"Monarch":{"xref_id":"0011622"}}}


id: MONDO:0030912
data:
  {"annotated_genes":["SJAG_03698","SJAG_03418"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87217,87218],"is_not":false,"summary":null,"term":"MONDO:0030912"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03418":null,"SJAG_03698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 47","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17935","OMIM:617635","Orphanet:502434","DOID:0080238","MEDGEN:1622196","UMLS:C4539951"],"synonyms":[{"name":"MRD47","type":"related"},{"name":"STAG1-related intellectual disability-facial dysmorphism-gastroesophageal reflux syndrome","type":"exact"},{"name":"autosomal dominant intellectual disability 47","type":"related"},{"name":"autosomal dominant mental retardation 47","type":"related"},{"name":"intellectual disability, autosomal dominant 47","type":"exact"},{"name":"mental retardation, autosomal dominant 47","type":"related"}],"termid":"MONDO:0030912","terms_by_termid":{"MONDO:0030912":null},"xrefs":{"Monarch":{"xref_id":"0030912"}}}


id: PBO:0034344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-only_in_taxon","termid":"PBO:0034344"}


id: PATO:0000029
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000029 protein composition (obsolete PATO:0000029)","termid":"PATO:0000029"}


id: MONDO:1040051
data:
  {"annotated_genes":["SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013454"},{"annotations":[88159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008379"}]},"cv_name":"mondo","definition":"Any retinopathy caused by a variant in the IMPDH1 gene.","definition_xrefs":["PMID:11875049","PMID:37259572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"IMPDH1-related retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"IMPDH1-related retinopathy","type":"exact"}],"termid":"MONDO:1040051","terms_by_termid":{"MONDO:0008379":null,"MONDO:0013454":null},"xrefs":{"Monarch":{"xref_id":"1040051"}}}


id: PBO:0110374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPBAP1 pseudogene 1","termid":"PBO:0110374"}


id: PBO:0077106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 10","termid":"PBO:0077106"}


id: PBO:0088022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP protein involved in splicing; contains multiple tetriatricopeptide repeats","termid":"PBO:0088022"}


id: GO:0070443
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that consists of a heterodimer of the bHLH-ZIP proteins Mad and Max.","definition_xrefs":["PMID:8224841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Mad-Max complex","termid":"GO:0070443"}


id: PBO:0055254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2681","termid":"PBO:0055254"}


id: PBO:0061955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 9 pseudogene","termid":"PBO:0061955"}


id: PBO:0075698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBF2 antisense RNA 1","termid":"PBO:0075698"}


id: GO:0007581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent yeast cell size increase (obsolete GO:0007581)","synonyms":[{"name":"age-dependent yeast cell size increase","type":"exact"}],"termid":"GO:0007581"}


id: PBO:0034524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_bundle_during_G0_to_G1_transition","termid":"PBO:0034524"}


id: GO:0030734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 1,4-N1-D-glucooligosaccharide = S-adenosyl-L-homocysteine + oligosaccharide containing 6-methyl-D-glucose units.","definition_xrefs":["EC:2.1.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"polysaccharide O-methyltransferase activity","secondary_identifiers":["MetaCyc:POLYSACCHARIDE-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:1,4-alpha-D-glucan 6-O-methyltransferase activity","type":"related"},{"name":"acylpolysacharide 6-methyltransferase activity","type":"related"},{"name":"polysaccharide methyltransferase activity","type":"related"}],"termid":"GO:0030734"}


id: FYPO:0001344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication initiation","termid":"FYPO:0000176"},{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic DNA replication initiation","synonyms":[{"name":"abnormal DNA replication initiation during mitotic cell cycle","type":"exact"},{"name":"abnormal DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0001344"}


id: PBO:0084743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein of unknown function; required for normal oxygen consumption; contains twin cysteine-x9-cysteine motifs; protein abundance increases in response to DNA replication stress","termid":"PBO:0084743"}


id: MONDO:0019230
data:
  {"annotated_genes":["SJAG_00495","SJAG_00120","SJAG_00660","SJAG_01903","SJAG_01471","SJAG_00212","SJAG_03457","SJAG_00516","SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89064,89065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[86855,86854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[88912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[87001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[88647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[88646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[87831,87832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[88324,88325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"},{"annotations":[88571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009400"},{"annotations":[88529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009401"},{"annotations":[88894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"},{"annotations":[87439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00495":null,"SJAG_00516":null,"SJAG_00660":null,"SJAG_01471":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of ornithine or proline metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79185","UMLS:C5681278","MEDGEN:1842760","GARD:18961"],"synonyms":[{"name":"disorder of ornithine or proline metabolism","type":"related"}],"termid":"MONDO:0019230","terms_by_termid":{"MONDO:0009053":null,"MONDO:0009400":null,"MONDO:0009401":null,"MONDO:0009796":null,"MONDO:0010208":null,"MONDO:0011006":null,"MONDO:0013051":null,"MONDO:0014702":null,"MONDO:0014706":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0019230"}}}


id: GO:0046436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-alanine, the D-enantiomer of the amino acid alanine, i.e. (2R)-2-aminopropanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"D-alanine metabolic process","synonyms":[{"name":"D-alanine metabolism","type":"exact"}],"termid":"GO:0046436"}


id: PBO:0058587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6720","termid":"PBO:0058587"}


id: GO:0030537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior in a larval form of an organism, an immature organism that must undergo metamorphosis to assume adult characteristics.","definition_xrefs":["ISBN:0877797099","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval behavior","secondary_identifiers":["GO:0017037"],"synonyms":[{"name":"larval behaviour","type":"exact"}],"termid":"GO:0030537"}


id: SO:0000207
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"SSLP are a kind of sequence alteration where the number of repeated sequences in intergenic regions may differ.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_alteration","termid":"SO:0000248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simple_sequence_length_variation","secondary_identifiers":["http://en.wikipedia.org/wiki/Simple_sequence_length_polymorphism"],"synonyms":[{"name":"SSLP","type":"related"},{"name":"simple sequence length polymorphism","type":"related"},{"name":"simple sequence length variation","type":"exact"}],"termid":"SO:0000207"}


id: PBO:0089722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane lipid metabolism regulator Opa3","termid":"PBO:0089722"}


id: MONDO:0015684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant peritoneal mesothelioma (obsolete MONDO:0015684)","termid":"MONDO:0015684","xrefs":{"Monarch":{"xref_id":"0015684"}}}


id: PBO:0061957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 13 pseudogene","termid":"PBO:0061957"}


id: GO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become trophectoderm cells.","definition_xrefs":["ISBN:0198542771","GOC:dph","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"trophectodermal cell differentiation","termid":"GO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell fate commitment","synonyms":[{"name":"trophectoderm cell fate commitment","type":"exact"}],"termid":"GO:0001830"}


id: GO:0022835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when a specific neurotransmitter has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0038023","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"transmitter-gated channel activity","synonyms":[{"name":"extracellular substance gated channel activity","type":"exact"},{"name":"neurotransmitter-gated channel activity","type":"exact"}],"termid":"GO:0022835"}


id: MONDO:0013340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing young-onset Parkinson disease in which the cause of the disease is a mutation in the UCHL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 5, autosomal dominant, susceptibility to","secondary_identifiers":["MEDGEN:462249","OMIM:613643","UMLS:C3150899"],"synonyms":[{"name":"PARK5","type":"related"},{"name":"Parkinson disease 5, autosomal dominant, susceptibility to","type":"exact"},{"name":"Parkinson disease 5, susceptibility to","type":"exact"},{"name":"UCHL1 young-onset Parkinson disease","type":"exact"},{"name":"susceptibility to autosomal dominant Parkinson disease 5","type":"related"},{"name":"young-onset Parkinson disease caused by mutation in UCHL1","type":"exact"}],"termid":"MONDO:0013340","xrefs":{"Monarch":{"xref_id":"0013340"}}}


id: GO:0046529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the parts of the wing imaginal discs, giving rise to the adult thorax.","direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc fusion","termid":"GO:0046528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc fusion, thorax closure","termid":"GO:0046529"}


id: MOD:01196
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant, replaced with MOD:01654. Remap to MOD:01654.","definition_xrefs":["Unimod:139"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01196 5-dimethylaminonaphthalene-1-sulfonyl - site K (obsolete MOD:01196)","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"}],"termid":"MOD:01196"}


id: PATO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pink color having high brightness and moderate saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pink","termid":"PATO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light deep pink","termid":"PATO:0001257"}


id: FYPO:0004009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of ribosomal DNA into ribosomal RNA occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased rRNA transcription","synonyms":[{"name":"decreased rDNA transcription","type":"exact"},{"name":"decreased rRNA transcription during mitotic cell cycle","type":"related"},{"name":"decreased rRNA transcription during vegetative growth","type":"exact"},{"name":"decreased ribosomal RNA transcription","type":"exact"},{"name":"reduced rRNA transcription","type":"exact"}],"termid":"FYPO:0004009"}


id: PBO:0078793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 15-2","termid":"PBO:0078793"}


id: GO:0046037
data:
  {"annotated_genes":["SJAG_01298","SJAG_04849","SJAG_04634","SJAG_00964","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65333],"is_not":false,"summary":null,"term":"GO:0046037"},{"annotations":[63869,59782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[77427,103107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GMP, guanosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_01298":null,"SJAG_04634":null,"SJAG_04849":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"GMP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"GMP metabolism","type":"exact"}],"termid":"GO:0046037","terms_by_termid":{"GO:0006177":null,"GO:0032263":null,"GO:0046037":null}}


id: MONDO:0001235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the vermiform appendix","direct_ancestors":[{"relation_name":"is_a","term_name":"appendiceal neoplasm","termid":"MONDO:0001236"},{"relation_name":"is_a","term_name":"cecum cancer","termid":"MONDO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"appendix cancer","secondary_identifiers":["SCTID:363411007","NCIT:C9333","UMLS:C0496779","MEDGEN:141676","DOID:11239","ICD9:153.5"],"synonyms":[{"name":"cancer of the appendix","type":"exact"},{"name":"cancer of vermiform appendix","type":"exact"},{"name":"malignant appendix neoplasm","type":"exact"},{"name":"malignant appendix tumor","type":"exact"},{"name":"malignant appendix tumour","type":"exact"},{"name":"malignant neoplasm of appendix","type":"exact"},{"name":"malignant neoplasm of appendix vermiformis","type":"exact"},{"name":"malignant neoplasm of the appendix","type":"exact"},{"name":"malignant neoplasm of vermiform appendix","type":"exact"},{"name":"malignant tumor of appendix","type":"exact"},{"name":"malignant tumor of the appendix","type":"exact"},{"name":"malignant tumour of appendix","type":"exact"},{"name":"malignant tumour of the appendix","type":"exact"},{"name":"malignant vermiform appendix neoplasm","type":"exact"},{"name":"vermiform appendix cancer","type":"exact"}],"termid":"MONDO:0001235","xrefs":{"Monarch":{"xref_id":"0001235"}}}


id: PBO:0086069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may function in RNA processing; interacts with Pbp1p and Pbp4p and associates with ribosomes; contains an RNA-binding LSM domain and an AD domain; GFP-fusion protein is induced by the DNA-damaging agent MMS; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086069"}


id: MONDO:0007987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type 2 collagen-related bone disorder characterized by moderately severe chondrodysplasia with disproportionate short stature of prenatal onset, prominent joints with restricted mobility, large epiphyses and dumbbell deformity of the long bones.","definition_xrefs":["Orphanet:485"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"},{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Kniest dysplasia","secondary_identifiers":["NCIT:C125594","MESH:C537207","OMIM:156550","ICD9:756.9","UMLS:C0265279","DOID:0080045","icd11.foundation:2088691719","GARD:6841","NORD:1339","SCTID:53974002","NANDO:2201350","MEDGEN:75559"],"synonyms":[{"name":"Kniest dysplasia","type":"exact"}],"termid":"MONDO:0007987","xrefs":{"Monarch":{"xref_id":"0007987"}}}


id: GO:0060093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the frequency, rate or extent of glycinergic synaptic transmission. Glycinergic synaptic transmission is the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine.","definition_xrefs":["GOC:dms","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glycinergic","termid":"GO:0060092"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, glycinergic","termid":"GO:0060012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, glycinergic","synonyms":[{"name":"negative regulation of glycinergic synaptic transmission","type":"exact"}],"termid":"GO:0060093"}


id: GO:0033346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-asparagine, via the intermediate 2-oxosuccinamate.","definition_xrefs":["MetaCyc:PWY-4002","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-asparagine catabolic process","termid":"GO:0006530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-asparagine catabolic process via 2-oxosuccinamate","termid":"GO:0033346"}


id: PBO:0080022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 8","termid":"PBO:0080022"}


id: MONDO:0054750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis, susceptibility to, 24","secondary_identifiers":["MEDGEN:1632999","DOID:0081378","OMIM:617892","UMLS:C4693523"],"synonyms":[{"name":"ALS24","type":"related"},{"name":"amyotrophic lateral sclerosis, susceptibility to, 24","type":"exact"}],"termid":"MONDO:0054750","xrefs":{"Monarch":{"xref_id":"0054750"}}}


id: PBO:0111691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 QL1","termid":"PBO:0111691"}


id: GO:0033607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex formed of superoxide dismutase 1 and Bcl-2. Complex formation is thought to link superoxide dismutase to an apoptotic pathway.","definition_xrefs":["PMID:15233914","PMID:16790527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SOD1-Bcl-2 complex","termid":"GO:0033607"}


id: FYPO:0001743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which isochromosome formation occurs more frequently than in wild type cells, and in which the break point is located in the imr region in the majority of cases. In isochromosome formation, one chromosome arm is lost and the other arm is duplicated in its place.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:18923422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased isochromosome formation","termid":"FYPO:0001742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased isochromosome formation with preferential breakage in the imr region","synonyms":[{"name":"increased occurrence of isochromosome formation with preferential breakage in the imr region","type":"exact"}],"termid":"FYPO:0001743"}


id: GO:0008212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mineralocorticoids, hormonal C21 corticosteroids synthesized from cholesterol. Mineralocorticoids act primarily on water and electrolyte balance.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"mineralocorticoid metabolic process","synonyms":[{"name":"mineralocorticoid metabolism","type":"exact"}],"termid":"GO:0008212"}


id: GO:0018178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The adenylylation of peptidyl-threonine to form peptidyl-O-(phospho-5'-adenosine)-L-threonine.","definition_xrefs":["RESID:AA0267"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-threonine adenylylation (obsolete GO:0018178)","synonyms":[{"name":"peptidyl-threonine adenylation","type":"exact"}],"termid":"GO:0018178"}


id: FYPO:0006977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the ubiquitination of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein ubiquitination","synonyms":[{"name":"abnormal protein ubiquitinylation","type":"related"},{"name":"abnormal protein ubiquitylation","type":"exact"}],"termid":"FYPO:0006977"}


id: PBO:0081700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 622","termid":"PBO:0081700"}


id: GO:0071855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide receptor.","definition_xrefs":["GOC:kmv","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"neuropeptide receptor binding","termid":"GO:0071855"}


id: PBO:0112955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnacentral_2d_structure_id","termid":"PBO:0112955"}


id: PBO:0051133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2/OR16-5 (non-functional)","termid":"PBO:0051133"}


id: PBO:0091350
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CLNS1A","termid":"PBO:0091350"}


id: GO:0047972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-guanidinopropanoate + H2O = beta-alanine + urea.","definition_xrefs":["RHEA:16029","EC:3.5.3.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"guanidinopropionase activity","secondary_identifiers":["KEGG_REACTION:R00913","MetaCyc:GUANIDINOPROPIONASE-RXN"],"synonyms":[{"name":"3-guanidinopropanoate amidinopropionase activity","type":"related"},{"name":"GPH","type":"related"},{"name":"GPase activity","type":"related"}],"termid":"GO:0047972"}


id: PBO:0029692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology,_single_irregular_mass","termid":"PBO:0029692"}


id: GO:0015304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose(out) = D-glucose(in).","definition_xrefs":["TC:2.A.1.1.4","TC:2.A.1.1.12","TC:2.A.1.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose uniporter activity","termid":"GO:0008516"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"D-glucose uniporter activity","synonyms":[{"name":"galactose, glucose uniporter activity","type":"narrow"},{"name":"glucose uniporter activity","type":"exact"}],"termid":"GO:0015304"}


id: PBO:0046436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esophagus epithelial intergenic associated transcript","termid":"PBO:0046436"}


id: PBO:0000715
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target genes transcriptionally co-regulated by Mcs6","termid":"PBO:0000715"}


id: PBO:0119672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 11","termid":"PBO:0119672"}


id: GO:0045920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of exocytosis","synonyms":[{"name":"down regulation of exocytosis","type":"exact"},{"name":"down-regulation of exocytosis","type":"exact"},{"name":"downregulation of exocytosis","type":"exact"},{"name":"inhibition of exocytosis","type":"narrow"}],"termid":"GO:0045920"}


id: PBO:0071086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 88","termid":"PBO:0071086"}


id: MONDO:0012904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive myoclonic epilepsy in which the cause of the disease is a mutation in the PRICKLE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, progressive myoclonic, 1B","secondary_identifiers":["OMIM:612437","ICD9:345.10","DOID:0111448","GARD:15556","MEDGEN:394003","UMLS:C2676254","MESH:C580388","SCTID:702326000"],"synonyms":[{"name":"EPM1B","type":"related"},{"name":"PRICKLE1 progressive myoclonic epilepsy","type":"exact"},{"name":"epilepsy, progressive myoclonic 1B","type":"exact"},{"name":"epilepsy, progressive myoclonic, 1B","type":"exact"},{"name":"epilepsy, progressive myoclonic, type 1B","type":"exact"},{"name":"progressive myoclonic epilepsy caused by mutation in PRICKLE1","type":"exact"}],"termid":"MONDO:0012904","xrefs":{"Monarch":{"xref_id":"0012904"}}}


id: PBO:0074671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 57","termid":"PBO:0074671"}


id: SO:0000842
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a gene that has a specific function.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_component_region","synonyms":[{"name":"gene component region","type":"exact"}],"termid":"SO:0000842"}


id: GO:0009671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nitrate(out) + H+(out) = nitrate(in) + H+(in).","definition_xrefs":["GOC:mah","PMID:1990981","PMID:10066586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"high-affinity secondary active nitrite transmembrane transporter activity","termid":"GO:0015513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nitrate:proton symporter activity","synonyms":[{"name":"nitrate(chlorate):hydrogen symporter activity","type":"exact"},{"name":"nitrate(chlorate):proton symporter activity","type":"exact"},{"name":"nitrate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0009671"}


id: FYPO:0004278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of uracil DNA N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal uracil DNA N-glycosylase activity","termid":"FYPO:0004277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased uracil DNA N-glycosylase activity","synonyms":[{"name":"reduced uracil DNA N-glycosylase activity","type":"exact"}],"termid":"FYPO:0004278"}


id: PBO:0078930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-2","termid":"PBO:0078930"}


id: PBO:0043718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 6","termid":"PBO:0043718"}


id: PBO:0049421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gulonolactone (L-) oxidase, pseudogene","termid":"PBO:0049421"}


id: PBO:0028569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleotide-excision_repair_during_cellular_response_to_UV","termid":"PBO:0028569"}


id: GO:0043699
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which uric acid and/or purines crystalize in reflective stacks. Leucosomes are synthesized in leucophore cells and have a whitish cast.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"leucosome","synonyms":[{"name":"refractosome","type":"exact"}],"termid":"GO:0043699"}


id: MONDO:0015027
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"}]},"cv_name":"mondo","definition":"A rare, autosomal dominant hereditary syndrome characterized by hypercalcemia, abnormally high levels of parathyroid hormone, and isolated hyperfunctioning parathyroid tumors.","definition_xrefs":["NCIT:C94830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"familial primary hyperparathyroidism","termid":"MONDO:0016365"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"is_obsolete":false,"name":"familial isolated hyperparathyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16923","icd11.foundation:1799621215","MEDGEN:1643161","Orphanet:99879","UMLS:C4551961"],"synonyms":[{"name":"FIHP","type":"exact"},{"name":"FIHPT","type":"exact"},{"name":"familial isolated hyperparathyroidism","type":"exact"}],"termid":"MONDO:0015027","terms_by_termid":{"MONDO:0007767":null},"xrefs":{"Monarch":{"xref_id":"0015027"}}}


id: SO:0001247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of synthetic nucleotides.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthetic_oligo","synonyms":[{"name":"synthetic oligo","type":"exact"}],"termid":"SO:0001247"}


id: PBO:0088543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin family protein Plp2","termid":"PBO:0088543"}


id: PBO:0085808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; encoded within an intron of the mitochondrial COX1 gene; translational initiation codon is predicted to be ATA rather than ATG","termid":"PBO:0085808"}


id: PBO:0080788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC1 N-terminal domain containing 1, C-terminal like pseudogene","termid":"PBO:0080788"}


id: _global:parasite_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_host","termid":"_global:has_host"},{"relation_name":"is_a","term_name":"interacts_with_via_parasite-host_interaction","termid":"_global:interacts_with_via_parasite-host_interaction"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasite_of","secondary_identifiers":["RO:0002444"],"synonyms":[{"name":"direct parasite of","type":"exact"}],"termid":"_global:parasite_of"}


id: PBO:0064267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G1","termid":"PBO:0064267"}


id: PBO:0080388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS16 core subunit of CORVET and HOPS complexes","termid":"PBO:0080388"}


id: PBO:0114114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex WD repeat subunit Spt8","termid":"PBO:0114114"}


id: PBO:0014594
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silencing In the Middle of the centromere","termid":"PBO:0014594"}


id: PBO:0039722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3C","termid":"PBO:0039722"}


id: PBO:0038397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_during","termid":"PBO:0038397"}


id: GO:0075210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with, inhibits or disrupts a cAMP-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cAMP-mediated signal transduction","synonyms":[{"name":"disruption of host cAMP-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host cAMP-mediated signal transduction","type":"narrow"},{"name":"negative regulation by symbiont of host cAMP-mediated signaling","type":"narrow"},{"name":"suppression by symbiont of host cAMP-mediated signal transduction","type":"narrow"}],"termid":"GO:0075210"}


id: FYPO:0000240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the size, shape, or structure of invasively growing filaments is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"abnormal filament morphology","synonyms":[{"name":"filament morphology aberrant","type":"exact"}],"termid":"FYPO:0000240"}


id: PBO:0079295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 12","termid":"PBO:0079295"}


id: GO:0004035
data:
  {"annotated_genes":["SJAG_03108","SJAG_02853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73938,77556],"is_not":false,"summary":null,"term":"GO:0004035"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphate monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["EC:3.1.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02853":null,"SJAG_03108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"alkaline phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8878787","MetaCyc:ALKAPHOSPHA-RXN"],"synonyms":[{"name":"alkaline phenyl phosphatase activity","type":"related"},{"name":"alkaline phosphohydrolase activity","type":"related"},{"name":"alkaline phosphomonoesterase activity","type":"related"},{"name":"glycerophosphatase activity","type":"broad"},{"name":"orthophosphoric-monoester phosphohydrolase (alkaline optimum)","type":"related"},{"name":"phosphate-monoester phosphohydrolase (alkaline optimum)","type":"related"},{"name":"phosphomonoesterase activity","type":"broad"}],"termid":"GO:0004035","terms_by_termid":{"GO:0004035":null}}


id: PBO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNS domain protein (SMART)","termid":"PBO:0000830"}


id: MONDO:0003492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal gland carcinoma","termid":"MONDO:0002463"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"lacrimal gland squamous cell carcinoma","secondary_identifiers":["MEDGEN:233607","UMLS:C1334360","DOID:5529","NCIT:C6092"],"synonyms":[{"name":"epidermoid carcinoma of lacrimal gland","type":"exact"},{"name":"epidermoid carcinoma of the lacrimal gland","type":"exact"},{"name":"lacrimal gland epidermoid carcinoma","type":"exact"},{"name":"lacrimal gland squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of lacrimal gland","type":"exact"},{"name":"squamous cell carcinoma of the lacrimal gland","type":"exact"}],"termid":"MONDO:0003492","xrefs":{"Monarch":{"xref_id":"0003492"}}}


id: PBO:0065006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM10 divergent transcript","termid":"PBO:0065006"}


id: GO:0003064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the hormones modulates the rate of heart muscle contraction. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate by chemical signal","termid":"GO:0003062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart rate by hormone","synonyms":[{"name":"hormonal cardiac chronotropy","type":"exact"},{"name":"regulation of the rate of heart contraction by hormone","type":"exact"}],"termid":"GO:0003064"}


id: GO:0140262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mRNA cap binding complex.","definition_xrefs":["PMID:16938833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mRNA cap binding complex binding","termid":"GO:0140262"}


id: PBO:0079056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 11-2","termid":"PBO:0079056"}


id: PBO:0044375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymosin, pseudogene","termid":"PBO:0044375"}


id: PBO:0045744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous Bornavirus like nucleoprotein 1","termid":"PBO:0045744"}


id: GO:0016002
data:
  {"annotated_genes":["SJAG_01693","SJAG_05027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80124,71936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004783"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + acceptor + 3 H2O = sulfite + reduced acceptor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sulfite reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"assimilatory sulfite reductase activity","type":"exact"},{"name":"assimilatory-type sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:(acceptor) oxidoreductase activity","type":"exact"},{"name":"hydrogen-sulfide:acceptor oxidoreductase activity","type":"exact"},{"name":"sulphite reductase activity","type":"exact"}],"termid":"GO:0016002","terms_by_termid":{"GO:0004783":null}}


id: GO:0021744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal motor nucleus of the vagus nerve over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:curators","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve development","termid":"GO:0021744"}


id: GO:0072375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The memory process that deals with the storage, retrieval and modification of information received at a time ago that is intermediate between that of short and long term memory (30min - 7hrs in Drosophila melanogaster).","definition_xrefs":["GOC:sart","PMID:14659098","PMID:7923375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"memory","termid":"GO:0007613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medium-term memory","synonyms":[{"name":"MTM","type":"narrow"},{"name":"middle-term memory","type":"exact"}],"termid":"GO:0072375"}


id: PBO:0040164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipocyte associated metabolic related lncRNA 2","termid":"PBO:0040164"}


id: PBO:0034593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_boundary_element_IRC1L","termid":"PBO:0034593"}


id: MONDO:0008190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete human papillomavirus type 18 integration site 1 (obsolete MONDO:0008190)","secondary_identifiers":["OMIM:167959"],"termid":"MONDO:0008190","xrefs":{"Monarch":{"xref_id":"0008190"}}}


id: GO:0160213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A beta-arrestin-dependent signaling pathway initiated by a dopamine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:21711983","PMID:25671228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to dopamine","termid":"GO:1903351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"beta-arrestin-dependent dopamine receptor signaling pathway","termid":"GO:0160213"}


id: GO:0160148
data:
  {"annotated_genes":["SJAG_04065"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104413],"is_not":false,"summary":null,"term":"GO:0160148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(55) in tRNA = pseudouridine(55) in tRNA.","definition_xrefs":["EC:5.4.99.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0140101","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"tRNA pseudouridine(55) synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:42532"],"termid":"GO:0160148","terms_by_termid":{"GO:0160148":null}}


id: PBO:0052808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 74","termid":"PBO:0052808"}


id: PBO:0081048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 4","termid":"PBO:0081048"}


id: PBO:0113427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine kinase that controls cell cycle progression; represses rDNA transcription and promotes 20S pre-rRNA maturation; catalytic activity regulates its association with pre-40S particles where it prevents premature entry into translation; downregulates centromeric RNA levels, limits RNAPII accessibility, stimulates cenRNA degradation and promotes timely kinetochore assembly; autophosphorylates and phosphorylates Rpa43p in anaphase to remove Pol I from rDNA","termid":"PBO:0113427"}


id: PBO:0076684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 3","termid":"PBO:0076684"}


id: FYPO:0004326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of protein phosphorylation is longer than normal during a cellular response to methylglyoxal. All phosphorylation may be affected, or only phosphorylation of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein modification during vegetative growth","termid":"FYPO:0000548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased duration of protein phosphorylation during cellular response to methylglyoxal","synonyms":[{"name":"increased duration of protein phosphorylation during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"increased duration of protein phosphorylation during cellular response to methylglyoxal during vegetative growth","type":"exact"},{"name":"prolonged protein phosphorylation during cellular response to methylglyoxal","type":"exact"}],"termid":"FYPO:0004326"}


id: MONDO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Penaeus monodon.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete tiger prawn allergy (obsolete MONDO:0000803)","secondary_identifiers":["DOID:0060528"],"synonyms":[{"name":"Penaeus monodon allergic disease","type":"exact"},{"name":"Penaeus monodon allergy","type":"exact"},{"name":"Penaeus monodon caused allergic disease","type":"exact"},{"name":"allergy of Penaeus monodon","type":"exact"}],"termid":"MONDO:0000803","xrefs":{"Monarch":{"xref_id":"0000803"}}}


id: PBO:0042680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein beta","termid":"PBO:0042680"}


id: PBO:0041981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 25","termid":"PBO:0041981"}


id: GO:0051870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to methotrexate, an antineoplastic antimetabolite with immunosuppressant properties. It is an inhibitor of tetrahydrofolate reductase and prevents the formation of tetrahydrofolate, necessary for synthesis of thymidylate, an essential component of DNA.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"methotrexate binding","termid":"GO:0051870"}


id: PBO:0028626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_shmoo_tip","termid":"PBO:0028626"}


id: MONDO:0030337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis laxa, autosomal recessive, type 2E","secondary_identifiers":["UMLS:C5561944","MEDGEN:1794154","OMIM:619451"],"synonyms":[{"name":"ARCL2E","type":"exact"},{"name":"cutis laxa, autosomal recessive, type 2E","type":"exact"},{"name":"cutis laxa, autosomal recessive, type IIE","type":"exact"}],"termid":"MONDO:0030337","xrefs":{"Monarch":{"xref_id":"0030337"}}}


id: MONDO:0971103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Nicolau syndrome","secondary_identifiers":["UMLS:C1142083","Orphanet:664787","MEDGEN:810780"],"termid":"MONDO:0971103","xrefs":{"Monarch":{"xref_id":"0971103"}}}


id: GO:0035453
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid inner membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plastid membrane","termid":"GO:0035452"},{"relation_name":"part_of","term_name":"plastid inner membrane","termid":"GO:0009528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of plastid inner membrane","synonyms":[{"name":"extrinsic to plastid inner membrane","type":"narrow"},{"name":"peripheral to plastid inner membrane","type":"exact"}],"termid":"GO:0035453"}


id: GO:0071231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a folic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to folic acid","synonyms":[{"name":"response to folate","type":"exact"},{"name":"response to vitamin B9","type":"exact"}],"termid":"GO:0071231"}


id: GO:0045491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylan, a polymer containing a beta-1,4-linked D-xylose backbone.","definition_xrefs":["PMID:11931668","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemicellulose metabolic process","termid":"GO:0010410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"xylan metabolic process","synonyms":[{"name":"xylan metabolism","type":"exact"}],"termid":"GO:0045491"}


id: PBO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulator Pcc1 (predicted)","termid":"PBO:0002253"}


id: GO:0032243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"negatively_regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of nucleoside transport","synonyms":[{"name":"down regulation of nucleoside transport","type":"exact"},{"name":"down-regulation of nucleoside transport","type":"exact"},{"name":"downregulation of nucleoside transport","type":"exact"},{"name":"inhibition of nucleoside transport","type":"narrow"}],"termid":"GO:0032243"}


id: PBO:0087338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of specific cargo proteins at the multivesicular body; mRNA is targeted to the bud via the mRNA transport system involving She2p","termid":"PBO:0087338"}


id: PBO:0089423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator Rad52 (previously Rad22)","termid":"PBO:0089423"}


id: MONDO:0003200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the urethra","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"carcinoma of urethra","termid":"MONDO:0021327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urethra adenocarcinoma","secondary_identifiers":["MEDGEN:234461","ONCOTREE:UAD","UMLS:C1336885","DOID:4910","NCIT:C6167"],"synonyms":[{"name":"UAD","type":"related"},{"name":"adenocarcinoma of the urethra","type":"exact"},{"name":"adenocarcinoma of urethra","type":"exact"},{"name":"urethra adenocarcinoma","type":"exact"},{"name":"urethral adenocarcinoma","type":"exact"}],"termid":"MONDO:0003200","xrefs":{"Monarch":{"xref_id":"0003200"}}}


id: PBO:0005826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyradoxal family membrane transporter (predicted)","termid":"PBO:0005826"}


id: GO:1990067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of DNA recombination occurring within a single chromosome.","definition_xrefs":["PMID:7748165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"intrachromosomal DNA recombination","synonyms":[{"name":"intrastrand DNA recombination","type":"exact"}],"termid":"GO:1990067"}


id: MONDO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the paranasal sinus.","definition_xrefs":["NCIT:C6849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paranasal sinus sarcoma","secondary_identifiers":["DOID:1362","UMLS:C1335342","MEDGEN:233842"],"synonyms":[{"name":"accessory sinus sarcoma","type":"exact"},{"name":"paranasal sinus sarcoma","type":"exact"},{"name":"sarcoma of accessory sinus","type":"exact"},{"name":"sarcoma of paranasal sinus","type":"exact"},{"name":"sarcoma of the accessory sinus","type":"exact"},{"name":"sarcoma of the paranasal sinus","type":"exact"}],"termid":"MONDO:0001758","xrefs":{"Monarch":{"xref_id":"0001758"}}}


id: PBO:0058608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6740","termid":"PBO:0058608"}


id: MONDO:0015457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum agenesis-double urinary collecting system syndrome","secondary_identifiers":["MEDGEN:419659","MESH:C535427","Orphanet:1492","UMLS:C2930897"],"synonyms":[{"name":"Ben Ari Shuper Mimouni syndrome","type":"related"},{"name":"Ben Ari-Shuper-Mimouni syndrome","type":"exact"},{"name":"agenesis of corpus callosum with double urinary collecting system, trigonocephaly and minor anomalies","type":"related"},{"name":"corpus callosum agenesis - double urinary collecting system","type":"related"},{"name":"corpus callosum agenesis double urinary collecting","type":"related"},{"name":"corpus callosum agenesis-double urinary collecting system syndrome","type":"exact"}],"termid":"MONDO:0015457","xrefs":{"Monarch":{"xref_id":"0015457"}}}


id: PBO:0035745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_eMTOC_absent_from_cell","termid":"PBO:0035745"}


id: MONDO:0018017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive type of endocrine tumor of the appendix presenting equally in males and females in the fifth decade of life and manifesting with a palpable mass and abdominal pain or acute appendicitis. Metastasis to the ovaries, peritoneum or right colon has usually already occurred in half of patients at the time of diagnosis.","definition_xrefs":["Orphanet:329984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"appendix carcinoma","termid":"MONDO:0003196"},{"relation_name":"is_a","term_name":"neuroendocrine tumor of the appendix, well differentiated, low or intermediate grade","termid":"MONDO:0015066"},{"relation_name":"is_a","term_name":"combined carcinoid and adenocarcinoma","termid":"MONDO:0021659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"goblet cell carcinoma","secondary_identifiers":["NORD:1931","GARD:10414","ICDO:8243/3","MEDGEN:60007","NCIT:C3689","UMLS:C0205695","ONCOTREE:GCCAP"],"synonyms":[{"name":"GCC","type":"exact"},{"name":"Goblet Cell Adenocarcinoma","type":"exact"},{"name":"appendix adenocarcinoid tumor","type":"exact"},{"name":"appendix adenocarcinoid tumour","type":"exact"},{"name":"appendix goblet cell carcinoid","type":"exact"},{"name":"appendix goblet cell carcinoid tumor","type":"exact"},{"name":"appendix goblet cell carcinoid tumour","type":"exact"},{"name":"appendix mixed carcinoid-adenocarcinoma","type":"exact"},{"name":"carcinoma of goblet cell","type":"exact"},{"name":"goblet cell adenocarcinoid","type":"exact"},{"name":"goblet cell carcinoid","type":"exact"},{"name":"goblet cell carcinoid of appendix","type":"exact"},{"name":"goblet cell carcinoid of the appendix","type":"exact"},{"name":"goblet cell carcinoid tumor","type":"exact"},{"name":"goblet cell carcinoid tumour","type":"exact"},{"name":"goblet cell carcinoma","type":"exact"},{"name":"goblet cell tumor","type":"exact"},{"name":"goblet cell tumour","type":"exact"},{"name":"mucinous carcinoid","type":"related"},{"name":"mucinous carcinoid tumor","type":"exact"},{"name":"mucinous carcinoid tumour","type":"exact"}],"termid":"MONDO:0018017","xrefs":{"Monarch":{"xref_id":"0018017"}}}


id: GO:0070126
data:
  {"annotated_genes":["SJAG_00308","SJAG_01518","SJAG_00286","SJAG_05221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97382,97819,100544,103986],"is_not":false,"summary":null,"term":"GO:0070126"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome in a mitochondrion, usually in response to a termination codon (note that mitochondria use variants of the universal genetic code that differ between different taxa).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational termination","termid":"GO:0006415"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00308":null,"SJAG_01518":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0140053"],"is_obsolete":false,"name":"mitochondrial translational termination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5419276"],"synonyms":[{"name":"mitochondrial translation termination","type":"exact"}],"termid":"GO:0070126","terms_by_termid":{"GO:0070126":null}}


id: GO:0043198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic shaft","secondary_identifiers":["NIF_Subcellular:sao2034472720"],"synonyms":[{"name":"trunk","type":"related"}],"termid":"GO:0043198"}


id: SO:0001121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of two consecutive residues with dihedral angles: Residue(i): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_nest_motif","termid":"SO:0001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nest_left_right_motif","secondary_identifiers":["BS:00224"],"synonyms":[{"name":"nest_left_right","type":"exact"},{"name":"nest_lr","type":"exact"},{"name":"polypeptide nest left right motif","type":"exact"}],"termid":"SO:0001121"}


id: PBO:0006212
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assigned_by","termid":"PBO:0006212"}


id: GO:0008635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process and is mediated by cytochrome c.","definition_xrefs":["GOC:jl","GOC:dph","PMID:14744432","GOC:mtg_apoptosis","Wikipedia:Caspase","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c (obsolete GO:0008635)","secondary_identifiers":["Reactome:R-HSA-111459"],"synonyms":[{"name":"activation of caspase activity by cytochrome c","type":"narrow"},{"name":"caspase activation via cytochrome c","type":"exact"}],"termid":"GO:0008635"}


id: PBO:0070285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 26","termid":"PBO:0070285"}


id: PBO:0054298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1689","termid":"PBO:0054298"}


id: GO:0050065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + pyruvate = L-alanine + L-allysine.","definition_xrefs":["EC:2.6.1.71","RHEA:19393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"lysine-pyruvate 6-transaminase activity","secondary_identifiers":["MetaCyc:LYSINE--PYRUVATE-6-AMINOTRANSFERASE-RXN","KEGG_REACTION:R00453"],"synonyms":[{"name":"L-lysine:pyruvate aminotransferase activity","type":"related"},{"name":"Lys-AT","type":"related"},{"name":"lysine--pyruvate 6-aminotransferase activity","type":"exact"},{"name":"lysine-pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0050065"}


id: GO:0032398
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of a MHC class Ib alpha chain and, in most cases, an invariant beta2-microglobin chain, and with or without a bound peptide or lipid antigen. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["GOC:add","PMID:15928678","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"MHC class Ib protein complex","termid":"GO:0032398"}


id: MONDO:0018071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 18 is a chromosomal abnormality associated with the presence of an extra chromosome 18 and characterized by growth delay, dolichocephaly, a characteristic facies, limb anomalies and visceral malformations.","definition_xrefs":["Orphanet:3380"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow hypertrophy (obsolete MONDO:0020186)","termid":"MONDO:0020186"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes distichiasis (obsolete MONDO:0020190)","termid":"MONDO:0020190"},{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 18","secondary_identifiers":["GARD:6321","MESH:C580500","UMLS:C4317091","DOID:1085","MEDGEN:1384417","MedDRA:10053884","NCIT:C36626","icd11.foundation:1505179968","NORD:1797","SCTID:51500006","ICD9:758.2","NANDO:2200963"],"synonyms":[{"name":"18 trisomy","type":"related"},{"name":"E3 trisomy","type":"exact"},{"name":"Edwards syndrome","type":"exact"},{"name":"chromosome 18 duplication","type":"exact"},{"name":"chromosome 18 trisomy","type":"related"},{"name":"complete trisomy 18 syndrome","type":"exact"},{"name":"trisomy 16-18 (formerly)","type":"related"},{"name":"trisomy 18","type":"exact"},{"name":"trisomy E (formerly)","type":"related"},{"name":"trisomy type 18","type":"exact"}],"termid":"MONDO:0018071","xrefs":{"Monarch":{"xref_id":"0018071"}}}


id: GO:0018475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-2-methyl-5-isopropylhexa-2,5-dienal + NAD+ + H2O = NADH + H+ + trans-2-methyl-5-isopropylhexa-2,5-dienoic acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-2-methyl-5-isopropylhexa-2,5-dienal dehydrogenase activity (obsolete GO:0018475)","termid":"GO:0018475"}


id: PBO:0086378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATPase of the AAA family; required for export of pre-ribosomal large subunits from the nucleus; distributed between the nucleolus, nucleoplasm, and nuclear periphery depending on growth conditions","termid":"PBO:0086378"}


id: PBO:0054391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1787","termid":"PBO:0054391"}


id: PBO:0068103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 410","termid":"PBO:0068103"}


id: MONDO:0014965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the GLDN gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 11","secondary_identifiers":["GARD:13220","OMIM:617194","MEDGEN:934637","UMLS:C4310670"],"synonyms":[{"name":"GLDN lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS11","type":"exact"},{"name":"lethal congenital contracture arthrogryposis-11","type":"related"},{"name":"lethal congenital contracture syndrome 11","type":"exact"},{"name":"lethal congenital contracture syndrome 11; LCCS11","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in GLDN","type":"exact"},{"name":"lethal congenital contracture syndrome type 11","type":"exact"}],"termid":"MONDO:0014965","xrefs":{"Monarch":{"xref_id":"0014965"}}}


id: PBO:0081227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 6","termid":"PBO:0081227"}


id: PBO:0072153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 30","termid":"PBO:0072153"}


id: PR:Q9P6N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC823.13c gene.","definition_xrefs":["UniProtKB:Q9P6N3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitive to high expression protein 9 homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.13c","synonyms":[{"name":"Spom972h-SPAC823.13c","type":"exact"}],"termid":"PR:Q9P6N3"}


id: PBO:0004855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific 1,3-beta-glucanosyltransferase Gas4","termid":"PBO:0004855"}


id: GO:0009077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of amino acids of the histidine family.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine family amino acid catabolic process (obsolete GO:0009077)","synonyms":[{"name":"histidine family amino acid breakdown","type":"exact"},{"name":"histidine family amino acid catabolic process","type":"exact"},{"name":"histidine family amino acid catabolism","type":"exact"},{"name":"histidine family amino acid degradation","type":"exact"}],"termid":"GO:0009077"}


id: MONDO:0859306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with variable intellectual disability and dysmorphic facies","secondary_identifiers":["UMLS:C5774242","OMIM:620098","MEDGEN:1824015"],"termid":"MONDO:0859306","xrefs":{"Monarch":{"xref_id":"0859306"}}}


id: PBO:0080539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASL divergent transcript","termid":"PBO:0080539"}


id: PR:Q10430
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein Spc25 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04698","PANTHER:PTHR14281:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein spc25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.04c","secondary_identifiers":["UniProtKB:Q10430"],"synonyms":[{"name":"Spom972h-SPC25","type":"exact"}],"termid":"PR:Q10430"}


id: MONDO:0006015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serious disorder characterized by massive adrenal gland hemorrhage secondary to a bacterial infection, most often Neisseria meningitidis infection. It is manifested with decreased blood pressure, shock, disseminated intravascular coagulation, and adrenocortical insufficiency.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"acute adrenal insufficiency","termid":"MONDO:0019801"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waterhouse-Friderichsen syndrome","secondary_identifiers":["SCTID:36102002","MESH:D014884","GARD:9449","Orphanet:100067","ICD10EXP:E35.1*","DOID:9931","ICD10CM:A39.1","EFO:0007544","UMLS:C1403891","NCIT:C85225","ICD9:036.3","MedDRA:10047847","ICD10EXP:A39.1+","icd11.foundation:2072098125","MEDGEN:234675"],"synonyms":[{"name":"WFS","type":"exact"},{"name":"Waterhouse–Friderichsen syndrome","type":"related"},{"name":"fatal pneumococcal Waterhouse-Friderichsen syndrome","type":"related"},{"name":"meningococcal hemorrhagic adrenalitis","type":"exact"}],"termid":"MONDO:0006015","xrefs":{"Monarch":{"xref_id":"0006015"}}}


id: GO:0004348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine.","definition_xrefs":["EC:3.2.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramidase activity","termid":"GO:0017042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glucosylceramidase activity","secondary_identifiers":["Reactome:R-HSA-1605591","Reactome:R-HSA-1861788","MetaCyc:GLUCOSYLCERAMIDASE-RXN","RHEA:13269","Reactome:R-HSA-1861789"],"synonyms":[{"name":"D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"related"},{"name":"GlcCer-beta-glucosidase activity","type":"related"},{"name":"acid beta-glucosidase activity","type":"related"},{"name":"beta-D-glucocerebrosidase activity","type":"related"},{"name":"beta-glucocerebrosidase activity","type":"related"},{"name":"beta-glucosylceramidase activity","type":"related"},{"name":"ceramide glucosidase activity","type":"related"},{"name":"glucocerebrosidase activity","type":"related"},{"name":"glucosphingosine glucosylhydrolase activity","type":"related"},{"name":"glucosylcerebrosidase activity","type":"related"},{"name":"glucosylsphingosine beta-D-glucosidase activity","type":"related"},{"name":"glucosylsphingosine beta-glucosidase activity","type":"related"},{"name":"psychosine hydrolase activity","type":"related"}],"termid":"GO:0004348"}


id: FYPO:0004032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at ribosomal DNA repeat regions is increased.","definition_xrefs":["PMID:25392932","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at ncRNA genes","termid":"FYPO:0007011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at rDNA","synonyms":[{"name":"increased protein localisation to chromatin at rDNA","type":"exact"},{"name":"increased protein localization to chromatin at rDNA during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at rDNA during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at rRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at ribosomal DNA","type":"exact"}],"termid":"FYPO:0004032"}


id: MONDO:0015240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Digitotalar dysmorphism, also known as distal arthrogryposis type 1 (DA1), is an autosomal dominant congenital anomaly characterized by contractures of the distal regions of the hands and feet with no facial involvement or any additional anomalies. It is the most common type of distal arthrogryposis.","definition_xrefs":["Orphanet:1146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digitotalar dysmorphism","secondary_identifiers":["icd11.foundation:1679749810","MESH:C565097","DOID:0111596","GARD:787"],"synonyms":[{"name":"AMCD1","type":"related"},{"name":"DA1","type":"exact"},{"name":"arthrogryposis multiplex congenita distal type 1","type":"exact"},{"name":"digitotalar dysmorphism","type":"exact"},{"name":"distal arthrogryposis type 1","type":"exact"},{"name":"distal arthrogryposis type 1A (sub-type)","type":"narrow"},{"name":"distal arthrogryposis type 1B (sub-type)","type":"narrow"}],"termid":"MONDO:0015240","xrefs":{"Monarch":{"xref_id":"0015240"}}}


id: PBO:0043546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL1A2 antisense RNA 1","termid":"PBO:0043546"}


id: PBO:0088905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane CoA pyrophosphatase (FIT) family lipid storage protein Fit1","termid":"PBO:0088905"}


id: GO:0002243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a parasitic plant is received and converted into a molecular signal.","definition_xrefs":["PMID:16547862","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to parasitic plant","termid":"GO:0002241"},{"relation_name":"is_a","term_name":"detection of symbiont","termid":"GO:0009602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of parasitic plant","termid":"GO:0002243"}


id: PBO:0072451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 15","termid":"PBO:0072451"}


id: MONDO:0012273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the CIB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 48","secondary_identifiers":["GARD:22612","UMLS:C1836199","DOID:0110505","MESH:C563720","OMIM:609439","MEDGEN:332149"],"synonyms":[{"name":"CIB2 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"DFNB48","type":"narrow"},{"name":"autosomal recessive deafness 48","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 48","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in CIB2","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 48","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 48","type":"exact"},{"name":"deafness, autosomal recessive 48","type":"narrow"},{"name":"deafness, autosomal recessive type 48","type":"narrow"}],"termid":"MONDO:0012273","xrefs":{"Monarch":{"xref_id":"0012273"}}}


id: PBO:0001594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAF assembly factor (CAF-1) complex subunit C, Pcf3","termid":"PBO:0001594"}


id: PBO:0045436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L2 pseudogene 4","termid":"PBO:0045436"}


id: GO:0044868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism modulates the frequency, rate or extent of any molecular function being mediated by a virus with which it is infected.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral process","termid":"GO:0044788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral molecular function","termid":"GO:0044868"}


id: PBO:0053527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 524","termid":"PBO:0053527"}


id: GO:0102290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-amyrin + O2 + NADPH + H+ = 11alpha-hydroxy-beta-amyrin + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-amyrin monooxygenase activity (obsolete GO:0102290)","termid":"GO:0102290"}


id: PBO:0052159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNJ6 antisense RNA 1","termid":"PBO:0052159"}


id: GO:0070269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gasdermin-dependent inflammatory response that is associated with the generation of pyrogenic mediators such as IL-1beta and IL-18. Gasdermins are activated by caspase-1 or caspase-4/11, or by certain granzymes. In some, but not all cells, it can lead to pyroptotic programmed cell death.","definition_xrefs":["PMID:18846107","PMID:33883744","PMID:21760595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyroptotic inflammatory response","secondary_identifiers":["Reactome:R-HSA-5620971"],"synonyms":[{"name":"pyroptosis","type":"broad"}],"termid":"GO:0070269"}


id: PBO:0030594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_aspartate_level","termid":"PBO:0030594"}


id: PBO:0091547
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SPT15","termid":"PBO:0091547"}


id: PBO:0028787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_heterochromatin_assembly_at_protein_coding_gene","termid":"PBO:0028787"}


id: MONDO:0044878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that occurs during adulthood.","definition_xrefs":["NCIT:C114777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult germ cell tumor","secondary_identifiers":["MEDGEN:859695","UMLS:C3900101"],"synonyms":[{"name":"Adult germ cell tumor","type":"exact"},{"name":"Adult germ cell tumour","type":"exact"},{"name":"germ cell tumor","type":"broad"},{"name":"germ cell tumor of adults","type":"exact"},{"name":"germ cell tumour","type":"broad"},{"name":"germ cell tumour of adults","type":"exact"}],"termid":"MONDO:0044878","xrefs":{"Monarch":{"xref_id":"0044878"}}}


id: PBO:0077234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMCC1 divergent transcript","termid":"PBO:0077234"}


id: MONDO:0008468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloarthropathy, susceptibility to","termid":"MONDO:0024512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondyloarthropathy, susceptibility to, 2","secondary_identifiers":["MEDGEN:355791","OMIM:183840","UMLS:C1866738","DOID:0080604"],"synonyms":[{"name":"SPDA2","type":"related"},{"name":"spondyloarthropathy, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0008468","xrefs":{"Monarch":{"xref_id":"0008468"}}}


id: PBO:0064855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14C","termid":"PBO:0064855"}


id: PBO:0073193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein W","termid":"PBO:0073193"}


id: PBO:0070361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 37","termid":"PBO:0070361"}


id: PBO:0018261
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Fizzy Related","termid":"PBO:0018261"}


id: PBO:0074783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 4B","termid":"PBO:0074783"}


id: GO:0004209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-6 activity (obsolete GO:0004209)","synonyms":[{"name":"caspase-6 activity","type":"exact"}],"termid":"GO:0004209"}


id: GO:0046712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"GDP metabolic process","termid":"GO:0046710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"GDP catabolic process","synonyms":[{"name":"GDP breakdown","type":"exact"},{"name":"GDP catabolism","type":"exact"},{"name":"GDP degradation","type":"exact"}],"termid":"GO:0046712"}


id: PBO:0001759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase (RNR) inhibitor family","termid":"PBO:0001759"}


id: PBO:0044652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 3","termid":"PBO:0044652"}


id: PBO:0044484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP26C1 divergent transcript","termid":"PBO:0044484"}


id: PBO:0028652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_snRNA_3'-end_processing","termid":"PBO:0028652"}


id: PBO:0090030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, WD repeat protein Cft1","termid":"PBO:0090030"}


id: MONDO:0009526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibular aplasia, tibial campomelia, and oligosyndactyly syndrome","secondary_identifiers":["GARD:2622","Orphanet:480773","MESH:C565436","MEDGEN:340887","UMLS:C1855499","OMIM:246570"],"synonyms":[{"name":"FATCO syndrome","type":"exact"},{"name":"fibular aplasia, tibial campomelia, and oligosyndactyly syndrome","type":"exact"},{"name":"fibular aplasia-tibial campomelia-oligosyndactyly syndrome","type":"exact"},{"name":"limb deficiency-heart malformation syndrome","type":"related"},{"name":"terminal transverse defects of the limbs associated with congenital heart malformations","type":"exact"}],"termid":"MONDO:0009526","xrefs":{"Monarch":{"xref_id":"0009526"}}}


id: PBO:0044940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHCR24 divergent transcript","termid":"PBO:0044940"}


id: MONDO:0023567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kozlowski Brown Hardwick syndrome","secondary_identifiers":["UMLS:C2931511","MEDGEN:419822","MESH:C537506"],"synonyms":[{"name":"unusual facies, hooked clavicles, 13 pairs of ribs, widened metaphyses, square shaped vertebral bodies and communicating hydrocephalus","type":"related"}],"termid":"MONDO:0023567","xrefs":{"Monarch":{"xref_id":"0023567"}}}


id: PBO:0089964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP 5'-nucleotidase Isn1","termid":"PBO:0089964"}


id: GO:0009307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense process found in many bacteria and archaea that protects the organism from invading foreign DNA by cleaving it with a restriction endonuclease. The organism's own DNA is protected by methylation of a specific nucleotide, which occurs immediately following replication, in the same target site as the restriction enzyme.","definition_xrefs":["UniProtKB-KW:KW-0680","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"},{"relation_name":"is_a","term_name":"clearance of foreign intracellular DNA","termid":"GO:0044355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA restriction-modification system","synonyms":[{"name":"DNA restriction","type":"broad"}],"termid":"GO:0009307"}


id: GO:0060062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region at the dorsal lip of the blatopore of the embryo that acts as the main signaling center establishing the vertebrate body plan.","definition_xrefs":["GOC:dph","PMID:9442883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Spemann organizer formation","termid":"GO:0060061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation at the dorsal lip of the blastopore","synonyms":[{"name":"Spemann's organizer formation at the dorsal lip of the blastopore","type":"exact"},{"name":"Spemann-Mangold organizer formation at the dorsal lip of the blastopore","type":"exact"}],"termid":"GO:0060062"}


id: PBO:0009551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pet117 cytochrome c oxidase assembly protein (predicted)","termid":"PBO:0009551"}


id: PBO:0026718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_dimethylation","termid":"PBO:0026718"}


id: GO:2000315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0045743"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:2000313"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"positive regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000315"}


id: PBO:0076357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 4","termid":"PBO:0076357"}


id: PBO:0050661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 1A","termid":"PBO:0050661"}


id: GO:0140569
data:
  {"annotated_genes":["SJAG_01435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102926],"is_not":false,"summary":null,"term":"GO:0140569"}]},"cv_name":"biological_process","definition":"The removal of a mislocalized protein from the endoplasmic reticulum (ER) membrane.","definition_xrefs":["PMID:32973005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraction of mislocalized protein from membrane","termid":"GO:0140568"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"extraction of mislocalized protein from ER membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140569","terms_by_termid":{"GO:0140569":null}}


id: PBO:0046398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1 like 4A","termid":"PBO:0046398"}


id: GO:0110079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of placenta blood vessel development.","definition_xrefs":["PMID:27748453","GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"placenta blood vessel development","termid":"GO:0060674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of placenta blood vessel development","termid":"GO:0110079"}


id: PBO:0084816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; predicted to have thiol-disulfide oxidoreductase active site","termid":"PBO:0084816"}


id: GO:0141208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-lactoyl-L-lysyl-[protein] + NAD = L-lysyl-[protein] + nicotinamide +2''-O-lactoyl-ADP-D-ribose, transfering a lactoyl group attached to a lysine residue in a protein to NAD.","definition_xrefs":["PMID:38512451","RHEA:80287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacetylase activity","termid":"GO:0034979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"NAD-dependent protein lysine delactylase activity","synonyms":[{"name":"protein lysine delactylase activity","type":"broad"}],"termid":"GO:0141208"}


id: GO:0072183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"},{"relation_name":"negatively_regulates","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072183"}


id: PBO:0089055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Adn2","termid":"PBO:0089055"}


id: GO:0004963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with follicle-stimulating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"follicle-stimulating hormone receptor activity","synonyms":[{"name":"FSH receptor activity","type":"exact"},{"name":"follicle stimulating hormone receptor activity","type":"exact"}],"termid":"GO:0004963"}


id: PBO:0063664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins inositol deacylase 1","termid":"PBO:0063664"}


id: GO:0097301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates the internal concentration of potassium ions at the level of a cell by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:20412803","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of potassium ion concentration by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0097301)","synonyms":[{"name":"cellular potassium ion homeostasis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"potassium ion homeostasis by positive regulation of transcription from RNA polymerase II promoter","type":"broad"}],"termid":"GO:0097301"}


id: PBO:0091929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase, unknown specificity","termid":"PBO:0091929"}


id: PBO:0068435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 5, pseudogene","termid":"PBO:0068435"}


id: GO:0036344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation and organization of a platelet, a non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.","definition_xrefs":["GOC:BHF","CL:0000233","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet morphogenesis","termid":"GO:0036344"}


id: MONDO:0012491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Waldenstrom macroglobulinemia","termid":"MONDO:0100280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"macroglobulinemia, Waldenstrom, 2","secondary_identifiers":["GARD:15486","MEDGEN:355856","OMIM:610430","UMLS:C1864876"],"synonyms":[{"name":"WM2","type":"exact"},{"name":"macroglobulinemia, WALDENSTROM, susceptibility to, 2","type":"related"}],"termid":"MONDO:0012491","xrefs":{"Monarch":{"xref_id":"0012491"}}}


id: GO:0014711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of branchiomeric skeletal muscle development. Branchiomeric skeletal muscle development is the process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"},{"relation_name":"regulates","term_name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branchiomeric skeletal muscle development","termid":"GO:0014711"}


id: MONDO:0012964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 15q is a rare chromosomal anomaly syndrome characterized by pre- and postnatal growth restriction, developmental delay, variable degrees of intellectual disability, hand and foot anomalies (e.g. brachy-/clinodactyly, talipes equinovarus, nail hypoplasia, proximally placed digits) and mild craniofacial dysmorphism (incl. microcephaly, triangular face, broad nasal bridge, micrognathia). Neonatal lymphedema, heart malformations, aplasia cutis congenita, aortic root dilatation, and autistic spectrum disorder have also been reported.","definition_xrefs":["Orphanet:1596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15q26-qter deletion syndrome","secondary_identifiers":["GARD:16572","DOID:0060397","OMIM:612626","MESH:C567232","SCTID:766050000","MEDGEN:390804","UMLS:C2675463"],"synonyms":[{"name":"15q26 deletion syndrome","type":"exact"},{"name":"Drayer syndrome","type":"exact"},{"name":"chromosome 15q26-qter deletion syndrome","type":"exact"},{"name":"chromosome 15q26-qter deletion syndrome, isolated cases","type":"exact"},{"name":"distal 15q deletion syndrome","type":"exact"},{"name":"distal monosomy 15q","type":"exact"},{"name":"distal monosomy type 15q","type":"exact"},{"name":"monosomy 15q26","type":"exact"},{"name":"telomeric 15q deletion syndrome","type":"exact"}],"termid":"MONDO:0012964","xrefs":{"Monarch":{"xref_id":"0012964"}}}


id: PBO:0000524
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STErile","termid":"PBO:0000524"}


id: GO:0045815
data:
  {"annotated_genes":["SJAG_00769","SJAG_00441","SJAG_02768","SJAG_03752","SJAG_03431","SJAG_02872","SJAG_01513","SJAG_02981","SJAG_01611","SJAG_01653","SJAG_03787","SJAG_01110","SJAG_04097","SJAG_01658","SJAG_00184","SJAG_00873","SJAG_04038","SJAG_03145","SJAG_02906","SJAG_07011","SJAG_02466","SJAG_02314","SJAG_04576","SJAG_02458","SJAG_01475","SJAG_01016","SJAG_00743","SJAG_03758","SJAG_00739","SJAG_00584","SJAG_00440","SJAG_00349","SJAG_00641","SJAG_03668","SJAG_03599","SJAG_04596","SJAG_02329","SJAG_02254","SJAG_02846","SJAG_00735","SJAG_05192","SJAG_01711","SJAG_03884","SJAG_02066","SJAG_00896","SJAG_04989","SJAG_04205","SJAG_01111","SJAG_03033","SJAG_02927","SJAG_00868","SJAG_01465","SJAG_03944","SJAG_03441","SJAG_01622","SJAG_02500","SJAG_02549","SJAG_03776","SJAG_04194","SJAG_02170","SJAG_04613","SJAG_03694","SJAG_04213","SJAG_03579","SJAG_02447","SJAG_03366","SJAG_00087","SJAG_00746","SJAG_04005","SJAG_00581","SJAG_03839","SJAG_04758","SJAG_01230","SJAG_00045","SJAG_04755","SJAG_02303","SJAG_01325","SJAG_02541","SJAG_02589","SJAG_02385","SJAG_05020","SJAG_02571","SJAG_03255","SJAG_02869","SJAG_04274","SJAG_02773","SJAG_03576","SJAG_05313","SJAG_02798","SJAG_01804"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59022,61511,64479,66091,67656,67710,89489,89633,89812,89992,90176,90327,90713,91126,91640,91910,92542,92556,93265,94156,94655,95373,95644,95875,95985,95999,96019,96047,96172,96517,97331,97356,97768,97775,98342,98544,98979,99716,100130,100396,100562,101039,101289,102887,103479,105041,105286,105771,106500,106965,107564,107712,108699,108851,109282,109397,109634,109835,110423,111033,111317,111440,111548,112449,112586,113734,114541,114965,115119,115139,115309,116222,116233,116307,116398,116718,117012,117256,117388,117402,117709,118351,118543,118912,119282,119462,119555,119577,119626,119979],"is_not":false,"summary":null,"term":"GO:0045815"}]},"cv_name":"biological_process","definition":"An epigenetic mechanism of regulation of gene expression that involves chromatin remodeling to capacitate gene expression by either modifying the chromatin fiber, the nucleosomal histones, or the DNA.","definition_xrefs":["PMID:34414474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression, epigenetic","termid":"GO:0141137"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":90,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00087":null,"SJAG_00184":null,"SJAG_00349":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_01016":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01804":null,"SJAG_02066":null,"SJAG_02170":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02314":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02846":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_03033":null,"SJAG_03145":null,"SJAG_03255":null,"SJAG_03366":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03884":null,"SJAG_03944":null,"SJAG_04005":null,"SJAG_04038":null,"SJAG_04097":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05313":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"transcription initiation-coupled chromatin remodeling","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-5250913","GO:0048096"],"synonyms":[{"name":"DNA replication-independent chromatin organization","type":"related"},{"name":"chromatin-mediated maintenance of transcription","type":"exact"},{"name":"epigenetic maintenance of chromatin in transcription-competent conformation","type":"exact"},{"name":"euchromatin assembly","type":"related"},{"name":"euchromatin organisation","type":"related"},{"name":"euchromatin organization","type":"related"},{"name":"long-term maintenance of gene activation","type":"related"},{"name":"maintenance of chromatin in transcription-competent conformation","type":"exact"},{"name":"transciptional initiation-coupled chromatin remodeling","type":"exact"},{"name":"transciptional initiation-coupled chromatin remodelling","type":"exact"},{"name":"transcription initiation coupled chromatin remodeling","type":"exact"},{"name":"transcription initiation coupled chromatin remodelling","type":"exact"},{"name":"transcriptional initiation-coupled chromatin remodeling","type":"exact"},{"name":"transcriptional initiation-coupled chromatin remodelling","type":"exact"}],"termid":"GO:0045815","terms_by_termid":{"GO:0045815":null}}


id: GO:0048229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gametophyte over time, from its formation to the mature structure. The gametophyte is the gamete-producing individual or phase in the life cycle having alternation of generations. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["PO:0009004","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gametophyte development","synonyms":[{"name":"gametogenesis","type":"broad"}],"termid":"GO:0048229"}


id: GO:0060923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to specific cardiac muscle cell fates and their capacity to differentiate into cardiac muscle cells. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate commitment","termid":"GO:0042693"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell fate commitment","synonyms":[{"name":"cardiomyocyte cell fate commitment","type":"exact"},{"name":"heart muscle cell fate commitment","type":"exact"}],"termid":"GO:0060923"}


id: MONDO:0012895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dystonia characterized by autosomal recessive inheritance of progressive dystonia, dysphonia, dysarthria and neck torticollis that has material basis in variation in the chromosome region 20p11.2-q13.12.","definition_xrefs":["DOID:0090042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"torsion dystonia 17","secondary_identifiers":["OMIM:612406","GARD:10536","MEDGEN:391003","MESH:C567319","NANDO:1200530","Orphanet:370103","UMLS:C2676281"],"synonyms":[{"name":"DYT17","type":"related"},{"name":"dystonia 17, torsion, autosomal recessive","type":"related"},{"name":"dystonia-17, primary torsion","type":"exact"},{"name":"primary dystonia, DYT17 type","type":"related"},{"name":"torsion dystonia type 17","type":"exact"}],"termid":"MONDO:0012895","xrefs":{"Monarch":{"xref_id":"0012895"}}}


id: PBO:0034171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_presynaptic_terminal_in","termid":"PBO:0034171"}


id: GO:0015823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phenylalanine, 2-amino-3-phenylpropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phenylalanine transport","synonyms":[{"name":"L-phenylalanine transport","type":"narrow"}],"termid":"GO:0015823"}


id: PBO:0091539
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human TPM1 smooth muscle isoform","termid":"PBO:0091539"}


id: PATO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000476 bad value (obsolete PATO:0000476)","termid":"PATO:0000476"}


id: PBO:0042461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 3","termid":"PBO:0042461"}


id: PBO:0003062
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.8","termid":"PBO:0003062"}


id: PBO:0075330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SON DNA and RNA binding protein","termid":"PBO:0075330"}


id: GO:0035284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of the brain into a series of semi-repetitive parts or segments.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"},{"relation_name":"part_of","term_name":"central nervous system segmentation","termid":"GO:0035283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brain segmentation","termid":"GO:0035284"}


id: PBO:0039572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 66","termid":"PBO:0039572"}


id: GO:0043046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 of cytosine that contributes to the establishment of DNA methylation patterns in the gamete.","definition_xrefs":["PMID:12138111","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation involved in gamete generation (obsolete GO:0043046)","synonyms":[{"name":"de novo DNA methylation","type":"related"}],"termid":"GO:0043046"}


id: GO:0033534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of verbascose, the pentasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose family oligosaccharide biosynthetic process","termid":"GO:0010325"},{"relation_name":"is_a","term_name":"verbascose metabolic process","termid":"GO:0033533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"verbascose biosynthetic process","synonyms":[{"name":"verbascose anabolism","type":"exact"},{"name":"verbascose biosynthesis","type":"exact"},{"name":"verbascose formation","type":"exact"},{"name":"verbascose synthesis","type":"exact"}],"termid":"GO:0033534"}


id: PBO:0062120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 48 pseudogene","termid":"PBO:0062120"}


id: PR:Q7LKZ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lvs1 gene.","definition_xrefs":["UniProtKB:Q7LKZ7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.06c","synonyms":[{"name":"Spom972h-lvs1","type":"exact"}],"termid":"PR:Q7LKZ7"}


id: PBO:0083542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YRF1-4/YLR466W","termid":"PBO:0083542"}


id: PATO:0001662
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to being damaged or destroyed.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragility","termid":"PATO:0001662"}


id: GO:0042019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-23.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-23 binding","synonyms":[{"name":"IL-23 binding","type":"exact"}],"termid":"GO:0042019"}


id: PBO:0086524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YBR209W is not an essential gene","termid":"PBO:0086524"}


id: PBO:0050175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 31","termid":"PBO:0050175"}


id: MONDO:0007938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sex reversal in an individual associated with a 9p24.3 deletion.","definition_xrefs":["NCIT:C132270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 4","secondary_identifiers":["DOID:0111771","GARD:15083","MEDGEN:416704","MESH:C567887","OMIM:154230","UMLS:C2752149"],"synonyms":[{"name":"46,XY SEX reversal 4","type":"related"},{"name":"46,XY Sex reversal type 4","type":"exact"},{"name":"46,XY gonadal dysgenesis, partial or complete, with 9P24.3 deletion","type":"related"},{"name":"46,XY sex reversal 4","type":"exact"},{"name":"46XY sex reversal 4, Isolated cases","type":"exact"},{"name":"SRXY4","type":"related"},{"name":"chromosome 9P24.3 deletion syndrome","type":"related"}],"termid":"MONDO:0007938","xrefs":{"Monarch":{"xref_id":"0007938"}}}


id: FYPO:0007338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 methylation at centromere during vegetative growth","termid":"FYPO:0007337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K4 trimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K4 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K4 trimethylation at centromere","type":"exact"},{"name":"increased histone H3-K4 trimethylation at centromere during mitotic cell cycle during vegetative growth","type":"related"},{"name":"increased histone H3-K4 trimethylation at centromeric region","type":"exact"},{"name":"increased histone H3K4 trimethylation at centromere","type":"exact"},{"name":"increased histone H3K4me3 at centromere","type":"exact"},{"name":"increased histone lysine H3 K4 trimethylation at centromere","type":"exact"}],"termid":"FYPO:0007338"}


id: MONDO:0014739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the MET gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 97","secondary_identifiers":["MEDGEN:899875","UMLS:C4084709","GARD:22655","OMIM:616705","DOID:0110539"],"synonyms":[{"name":"DFNB97","type":"narrow"},{"name":"MET autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 97","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 97","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in MET","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 97","type":"narrow"},{"name":"deafness, autosomal recessive 97","type":"narrow"},{"name":"deafness, autosomal recessive type 97","type":"narrow"}],"termid":"MONDO:0014739","xrefs":{"Monarch":{"xref_id":"0014739"}}}


id: MONDO:0014423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency (SCID) due to DNA-PKcs deficiency is an extremely rare type of SCID characterized by the classical signs of SCID (severe and recurrent infections, diarrhea, failure to thrive), absence of T and B lymphocytes, and cell sensitivity to ionizing radiation.","definition_xrefs":["Orphanet:317425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency due to DNA-PKcs deficiency","secondary_identifiers":["MEDGEN:863270","SCTID:716871006","UMLS:C4014833","OMIM:615966","GARD:17441","DOID:0111961"],"synonyms":[{"name":"IMD26","type":"related"},{"name":"SCID due to DNA-PKcs deficiency","type":"exact"},{"name":"immunodeficiency 26 with or without neurologic abnormalities","type":"related"},{"name":"immunodeficiency 26, with or without neurologic abnormalities","type":"exact"}],"termid":"MONDO:0014423","xrefs":{"Monarch":{"xref_id":"0014423"}}}


id: PBO:0111344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNA associated protein Dip2","termid":"PBO:0111344"}


id: PBO:0069355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 615, pseudogene","termid":"PBO:0069355"}


id: MONDO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term describing a benign soft tissue tumor which consists of two or more mesenchymal lines of differentiation, excluding a fibroblastic line of differentiation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"mesenchymoma","termid":"MONDO:0006854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign mesenchymoma","secondary_identifiers":["DOID:2667","ICDO:8990/0","NCIT:C4267","MEDGEN:87251","UMLS:C0334491"],"synonyms":[{"name":"mesenchymal tumor, benign","type":"exact"},{"name":"mesenchymoma, benign","type":"exact"},{"name":"mesenchymoma, benign (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002382","xrefs":{"Monarch":{"xref_id":"0002382"}}}


id: PBO:0005647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf17","termid":"PBO:0005647"}


id: PBO:0089176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi tether Uso1","termid":"PBO:0089176"}


id: GO:0052687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-isopropenyl-6-oxoheptanoate + CoA-SH + ATP = H2O + ADP + phosphate + (3R)-3-isopropenyl-6-oxoheptanoyl-CoA.","definition_xrefs":["KEGG_REACTION:R06396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"(3R)-3-isopropenyl-6-oxoheptanoate:CoA ligase (ADP-forming) activity","synonyms":[{"name":"3-isopropenyl-6-oxoheptanoyl-CoA synthetase activity","type":"broad"}],"termid":"GO:0052687"}


id: PBO:0048711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 3","termid":"PBO:0048711"}


id: PBO:0046141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 4","termid":"PBO:0046141"}


id: MONDO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, mesenchymal neoplasm that arises from the breast. It is surrounded by a thin capsule and composed of mature adipose tissue cells. Atypia is absent.","definition_xrefs":["NCIT:C4647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast lipoma","secondary_identifiers":["MEDGEN:138103","DOID:10199","ICD9:214.1","SCTID:276891009","UMLS:C0349565"],"synonyms":[{"name":"breast lipoma","type":"exact"},{"name":"lipoma of breast","type":"exact"},{"name":"lipoma of the breast","type":"exact"}],"termid":"MONDO:0000970","xrefs":{"Monarch":{"xref_id":"0000970"}}}


id: GO:0043980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by the addition of an acetyl group to a lysine residue at position 12 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B-K12 acetylation (obsolete GO:0043980)","synonyms":[{"name":"histone H2B acetylation at K12","type":"exact"}],"termid":"GO:0043980"}


id: GO:0100008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin biosynthetic process process that regulates fever generation.","definition_xrefs":["GOC:obol","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"},{"relation_name":"regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of fever generation by prostaglandin biosynthetic process","termid":"GO:0100008"}


id: MONDO:0859257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant dopa-responsive dystonia","termid":"MONDO:0971063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0003441","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder with language impairment and early-onset DOPA-responsive dystonia-parkinsonism","secondary_identifiers":["Orphanet:660017","OMIM:619911","MEDGEN:1805453","UMLS:C5677001"],"termid":"MONDO:0859257","xrefs":{"Monarch":{"xref_id":"0859257"}}}


id: FYPO:0008097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister chromatids partially separate in G2 arrest after glucose starvation (i.e. stationary phase).","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"separation of sister chromatids in stationary phase","termid":"FYPO:0008097"}


id: PBO:0091760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA, antisense to Mat1-Mi","termid":"PBO:0091760"}


id: PBO:0067332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 424, pseudogene","termid":"PBO:0067332"}


id: GO:0005463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a N-acetylgalactosamine from one side of a membrane to the other. N-acetylgalactosamine is a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine transmembrane transporter activity","termid":"GO:0005463"}


id: GO:0106380
data:
  {"annotated_genes":["SJAG_04634","SJAG_01070","SJAG_06634","SJAG_04123","SJAG_01298","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57274,75717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[103107,77427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[77428,65925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[77429,110233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"Any process which produces a purine ribonucleotide from derivatives of it, without de novo synthesis.","definition_xrefs":["PMID:8864750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine nucleotide salvage","termid":"GO:0032261"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_01298":null,"SJAG_01859":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleotide salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"termid":"GO:0106380","terms_by_termid":{"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044209":null}}


id: PBO:0003637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR95","termid":"PBO:0003637"}


id: PBO:0085817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; partially overlaps THO2/YNL139C","termid":"PBO:0085817"}


id: PBO:0049805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1","termid":"PBO:0049805"}


id: GO:0032636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-7 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-7 production","secondary_identifiers":["GO:0042227","GO:0072605"],"synonyms":[{"name":"IL-7 production","type":"exact"},{"name":"interleukin-7 biosynthetic process","type":"narrow"},{"name":"interleukin-7 secretion","type":"narrow"}],"termid":"GO:0032636"}


id: PBO:0113496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor eIF-5A; required for translation of proteins containing polyproline stretches; structural homolog of bacterial EF-P; undergoes an essential hypusination modification; HYP2 has paralog ANB1 that arose from whole genome duplication; in humans EIF5A variants cause a disorder characterized by variable combinations of developmental delay, microcephaly, micrognathia and dysmorphism; human EIF5A complements inviability of yeast hyp2 anb1 double null mutant","termid":"PBO:0113496"}


id: PBO:0030624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_maltase_activity","termid":"PBO:0030624"}


id: PBO:0051174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-63 (pseudogene)","termid":"PBO:0051174"}


id: GO:0050571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-anhydro-D-glucitol + NADP+ = 1,5-anhydro-D-fructose + H+ + NADPH.","definition_xrefs":["EC:1.1.1.263","RHEA:20665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose reductase activity","secondary_identifiers":["Reactome:R-HSA-9773976","KEGG_REACTION:R05682","MetaCyc:1.1.1.263-RXN"],"synonyms":[{"name":"1,5-anhydro-D-glucitol:NADP+ oxidoreductase activity","type":"related"},{"name":"AF reductase activity","type":"related"}],"termid":"GO:0050571"}


id: MONDO:0030796
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030634"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, hereditary diffuse, with spheroids","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:221820","UMLS:C3711381","MEDGEN:777989"],"termid":"MONDO:0030796","terms_by_termid":{"MONDO:0030634":null},"xrefs":{"Monarch":{"xref_id":"0030796"}}}


id: PBO:0061376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 36","termid":"PBO:0061376"}


id: MONDO:0011489
data:
  {"annotated_genes":["SJAG_01848"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87540],"is_not":false,"summary":null,"term":"MONDO:0011489"}]},"cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 12 is a pure form of hereditary spastic paraplegia characterized by a childhood- to adulthood-onset of slowly progressive lower limb spasticity and hyperreflexia of lower extremities, extensor plantar reflexes, distal sensory impairment, variable urinary dysfunction and pes cavus.","definition_xrefs":["Orphanet:100993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110765","GARD:9586","OMIM:604805","SCTID:763374004","MESH:C537484","MEDGEN:347618","UMLS:C1858106"],"synonyms":[{"name":"RTN2 hereditary spastic paraplegia","type":"exact"},{"name":"SPG12","type":"exact"},{"name":"autosomal dominant spastic paraplegia 12","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 12","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in RTN2","type":"exact"},{"name":"hereditary spastic paraplegia type 12","type":"exact"},{"name":"spastic paraplegia 12","type":"related"},{"name":"spastic paraplegia 12, autosomal dominant","type":"related"}],"termid":"MONDO:0011489","terms_by_termid":{"MONDO:0011489":null},"xrefs":{"Monarch":{"xref_id":"0011489"}}}


id: GO:0016878
data:
  {"annotated_genes":["SJAG_03471","SJAG_01524","SJAG_02741","SJAG_03813","SJAG_03909","SJAG_00947"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003987"},{"annotations":[78685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031956"},{"annotations":[115415,107537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[107538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[117770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050203"},{"annotations":[107539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"},{"annotations":[77116,73529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of an acid and a thiol via a carbon-sulfur bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:mah","EC:6.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-sulfur bonds","termid":"GO:0016877"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00947":null,"SJAG_01524":null,"SJAG_02741":null,"SJAG_03471":null,"SJAG_03813":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"acid-thiol ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016878","terms_by_termid":{"GO:0003987":null,"GO:0004775":null,"GO:0031956":null,"GO:0050203":null,"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: FYPO:0001702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nocodazole. Cells stop growing (and may die) at a concentration of nocodazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to nocodazole","synonyms":[{"name":"hypersensitive to nocodazole","type":"exact"},{"name":"sensitive to nocodazole during mitotic cell cycle","type":"related"},{"name":"sensitive to nocodazole during vegetative growth","type":"exact"}],"termid":"FYPO:0001702"}


id: PBO:0053375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 301","termid":"PBO:0053375"}


id: PBO:0056669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 7","termid":"PBO:0056669"}


id: GO:0006459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete binding unfolded ER proteins (obsolete GO:0006459)","synonyms":[{"name":"binding unfolded ER proteins","type":"exact"}],"termid":"GO:0006459"}


id: GO:0141003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group to a histone variant H2AX.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone kinase activity","termid":"GO:0035173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016301","GO:0004672","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histone H2AX kinase activity","termid":"GO:0141003"}


id: GO:0038112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-8 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-8","termid":"GO:0098759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-8-mediated signaling pathway","synonyms":[{"name":"IL-8-mediated signaling pathway","type":"exact"},{"name":"interleukin-8-mediated signalling pathway","type":"exact"}],"termid":"GO:0038112"}


id: SO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS region corresponding to a mature protein region of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature_protein_region_of_CDS","synonyms":[{"name":"INSDC_feature:mat_peptide","type":"exact"},{"name":"mature protein region of CDS","type":"exact"}],"termid":"SO:0002249"}


id: PR:Q01682
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pho4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q01682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-repressible acid phosphatase pho4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.03c","synonyms":[{"name":"Spom972h-pho4","type":"exact"}],"termid":"PR:Q01682"}


id: GO:0070635
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92501],"is_not":false,"summary":null,"term":"GO:0070635"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinamide riboside + H2O = nicotinamide + D-ribose.","definition_xrefs":["MetaCyc:RXN-8441","PMID:19001417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"nicotinamide riboside hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide hydrolase activity","type":"exact"},{"name":"nicotinamide ribonucleoside hydrolase activity","type":"exact"}],"termid":"GO:0070635","terms_by_termid":{"GO:0070635":null}}


id: GO:0000139
data:
  {"annotated_genes":["SJAG_04018","SJAG_03552","SJAG_01206","SJAG_00434","SJAG_02316","SJAG_02996","SJAG_01508","SJAG_01642","SJAG_02640","SJAG_04402","SJAG_01133","SJAG_05736","SJAG_00557","SJAG_03368","SJAG_03082","SJAG_00525","SJAG_03850","SJAG_01633","SJAG_03670","SJAG_04095","SJAG_03528","SJAG_03933","SJAG_03268","SJAG_04592","SJAG_00339","SJAG_04770","SJAG_04739","SJAG_01177","SJAG_00261","SJAG_01972","SJAG_04474","SJAG_00553","SJAG_05013","SJAG_03499","SJAG_01991","SJAG_01027","SJAG_01960","SJAG_00669","SJAG_00598","SJAG_04714","SJAG_03555","SJAG_00816","SJAG_05286","SJAG_03871","SJAG_00143","SJAG_03015","SJAG_00804","SJAG_01264","SJAG_04023","SJAG_00880","SJAG_03302","SJAG_04112","SJAG_02902","SJAG_04340","SJAG_00328","SJAG_02399","SJAG_05209","SJAG_01276","SJAG_04668","SJAG_04401","SJAG_03158","SJAG_02910","SJAG_03889","SJAG_01516","SJAG_00171","SJAG_04398","SJAG_00506","SJAG_04162","SJAG_06588","SJAG_04406","SJAG_00785","SJAG_02839","SJAG_01409","SJAG_04697","SJAG_04391","SJAG_00276","SJAG_02706","SJAG_01021","SJAG_03790","SJAG_02519"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57594,57851,58399,58941,59567,59639,59830,61783,64704,67282,67459,67592,67774,68004,71610,72781,72950,73196,73291,74482,75668,76632,77096,77440,77502,77577,77783,77804,78045,78628,78673,78767,79056,79374,79399,80129,80216,80804,81043,81081,81724,90276,90825,90992,92296,93385,94255,94758,94970,95198,98185,98301,98792,99394,101367,101419,102094,106238,106439,106536,106747,107005,107908,107932,109805,110941,110984,111622,111772,112722,112916,114243,114672,120405,120471],"is_not":false,"summary":null,"term":"GO:0000139"},{"annotations":[71813],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[120068,59933,89325,71504],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":80,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00171":null,"SJAG_00261":null,"SJAG_00276":null,"SJAG_00328":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00506":null,"SJAG_00525":null,"SJAG_00553":null,"SJAG_00557":null,"SJAG_00598":null,"SJAG_00669":null,"SJAG_00785":null,"SJAG_00804":null,"SJAG_00816":null,"SJAG_00880":null,"SJAG_01021":null,"SJAG_01027":null,"SJAG_01133":null,"SJAG_01177":null,"SJAG_01206":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01409":null,"SJAG_01508":null,"SJAG_01516":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01960":null,"SJAG_01972":null,"SJAG_01991":null,"SJAG_02316":null,"SJAG_02399":null,"SJAG_02519":null,"SJAG_02640":null,"SJAG_02706":null,"SJAG_02839":null,"SJAG_02902":null,"SJAG_02910":null,"SJAG_02996":null,"SJAG_03015":null,"SJAG_03082":null,"SJAG_03158":null,"SJAG_03268":null,"SJAG_03302":null,"SJAG_03368":null,"SJAG_03499":null,"SJAG_03528":null,"SJAG_03552":null,"SJAG_03555":null,"SJAG_03670":null,"SJAG_03790":null,"SJAG_03850":null,"SJAG_03871":null,"SJAG_03889":null,"SJAG_03933":null,"SJAG_04018":null,"SJAG_04023":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04162":null,"SJAG_04340":null,"SJAG_04391":null,"SJAG_04398":null,"SJAG_04401":null,"SJAG_04402":null,"SJAG_04406":null,"SJAG_04474":null,"SJAG_04592":null,"SJAG_04668":null,"SJAG_04697":null,"SJAG_04714":null,"SJAG_04739":null,"SJAG_04770":null,"SJAG_05013":null,"SJAG_05209":null,"SJAG_05286":null,"SJAG_05736":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"Golgi membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"Golgi apparatus membrane","type":"exact"}],"termid":"GO:0000139","terms_by_termid":{"GO:0000136":null,"GO:0000139":null,"GO:0140497":null}}


id: PBO:0065306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 23","termid":"PBO:0065306"}


id: PBO:0064128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase inhibitor alpha","termid":"PBO:0064128"}


id: MONDO:0015378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fourth branchial cleft anomaly","secondary_identifiers":["SCTID:707234001","Orphanet:141037","GARD:19936","UMLS:C3873490","MEDGEN:837698"],"synonyms":[{"name":"fourth branchial cleft cyst","type":"exact"},{"name":"fourth branchial cleft fistula","type":"exact"}],"termid":"MONDO:0015378","xrefs":{"Monarch":{"xref_id":"0015378"}}}


id: PBO:0085869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has weak similarity to proteins involved in thiamin metabolism; expression is induced in the absence of thiamin","termid":"PBO:0085869"}


id: PBO:0049577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.3 histone A","termid":"PBO:0049577"}


id: FYPO:0005125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more RNAs that are normally expressed during nitrogen starvation measured in a cell is higher than normal (i.e. higher than observed in wild-type cells) during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during meiotic cell cycle","termid":"FYPO:0005120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased level of nitrogen starvation gene mRNA during meiotic cell cycle","synonyms":[{"name":"increased level of cellular response to nitrogen starvation gene mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen depletion gene mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen deprivation gene mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen starvation gene RNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen starvation gene transcripts during meiotic cell cycle","type":"exact"},{"name":"increased nitrogen starvation gene mRNA accumulation during meiotic cell cycle","type":"related"}],"termid":"FYPO:0005125"}


id: PBO:0055994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSAMP antisense RNA 1","termid":"PBO:0055994"}


id: PBO:0074601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11B","termid":"PBO:0074601"}


id: PBO:0029096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cysteine_synthase_activity","termid":"PBO:0029096"}


id: GO:0090500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"}


id: PBO:0059425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRS2 pseudogene 2","termid":"PBO:0059425"}


id: PBO:0067988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 290","termid":"PBO:0067988"}


id: MONDO:0012191
data:
  {"annotated_genes":["SJAG_02353"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87277],"is_not":false,"summary":null,"term":"MONDO:0012191"}]},"cv_name":"mondo","definition":"Hepatoencephalopathy due to combined oxidative phosphorylation deficiency type 1 is a rare, inherited mitochondrial disorder due to a defect in mitochondrial protein synthesis characterized by intrauterine growth retardation, metabolic decompensation with recurrent vomiting, persistent severe lactic acidosis, encephalopathy, seizures, failure to thrive, severe global developmental delay, poor eye contact, severe muscular hypotonia or axial hypotonia with limb hypertonia, hepatomegaly and/or liver dysfunction and/or liver failure, leading to fatal outcome in severe cases. Neuroimaging abnormalities may include corpus callosum thinning, leukodystrophy, delayed myelination and basal ganglia involvement.","definition_xrefs":["Orphanet:137681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02353":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"hepatoencephalopathy due to combined oxidative phosphorylation defect type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C563797","MEDGEN:322999","NCIT:C125663","SCTID:764962002","OMIM:609060","UMLS:C1836797","GARD:16949","DOID:0111474"],"synonyms":[{"name":"COXPD1","type":"related"},{"name":"GFM1 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"Hepatoencephalopathy due to COXPD1","type":"exact"},{"name":"Hepatoencephalopathy, early fatal progressive","type":"related"},{"name":"combined oxidative phosphorylation deficiency 1","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in GFM1","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 1","type":"exact"},{"name":"hepatoencephalopathy due to combined oxidative phosphorylation defect type 1","type":"exact"}],"termid":"MONDO:0012191","terms_by_termid":{"MONDO:0012191":null},"xrefs":{"Monarch":{"xref_id":"0012191"}}}


id: MONDO:0011949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thai symphalangism syndrome","secondary_identifiers":["UMLS:C1842679","MEDGEN:374990","MESH:C564303","OMIM:608028"],"synonyms":[{"name":"Thai symphalangism syndrome","type":"exact"}],"termid":"MONDO:0011949","xrefs":{"Monarch":{"xref_id":"0011949"}}}


id: FYPO:0006520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cytoplasmic translation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoplasmic translation","termid":"FYPO:0003124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cytoplasmic translation","synonyms":[{"name":"increased cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"increased cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0006520"}


id: GO:0061616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycolytic process through fructose-6-phosphate in which fructose is catabolized into pyruvate.","definition_xrefs":["ISBN:0201090910","GOC:dph","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose catabolic process","termid":"GO:0006001"},{"relation_name":"is_a","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0055086","GO:0006091","GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycolytic process from fructose through fructose-6-phosphate","synonyms":[{"name":"glycolysis from fructose through fructose-6-phosphate","type":"exact"}],"termid":"GO:0061616"}


id: PBO:0083539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YIP4/YGL198W","termid":"PBO:0083539"}


id: MONDO:0005195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Septic peritonitis is an inflammatory condition of the peritoneum that occurs secondary to microbial contamination. This clinically important condition has a wide variety of clinical courses as well as high morbidity and mortality due to secondary multiorgan dysfunction. This article reviews the etiology and pathophysiology of this condition and its diagnosis in small animals; a companion article addresses treatment and prognosis.","definition_xrefs":["EFO:0002623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious peritonitis","termid":"MONDO:0004522"},{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septic peritonitis","secondary_identifiers":["Wikipedia:Septic_peritonitis","UMLS:C0341503","icd11.foundation:1560416608","PMID:22911262","MEDGEN:574434"],"termid":"MONDO:0005195","xrefs":{"Monarch":{"xref_id":"0005195"}}}


id: PBO:0066988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 291","termid":"PBO:0066988"}


id: GO:0018019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of a glutamine residue in proteins to form the peptidyl-N5-methyl-L-glutamine derivative.","definition_xrefs":["RESID:AA0071"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-glutamine methylation (obsolete GO:0018019)","termid":"GO:0018019"}


id: GO:0097675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Hrt3 in S. cerevisiae (Pof7 in S. pombe).","definition_xrefs":["PMID:15147268","GOC:jd","PMID:14747994","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Hrt3/Pof7 ubiquitin ligase complex","termid":"GO:0097675"}


id: GO:0018053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-valine amide by hydrolysis and oxidation of an interior Val-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0100"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-valine amidation (obsolete GO:0018053)","termid":"GO:0018053"}


id: GO:1903317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein maturation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"regulation of protein maturation","termid":"GO:1903317"}


id: GO:0010408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the cell wall arabinogalactan II glycoprotein variant which contains both an arabinogalactan protein (AGP) motif and a fasciclin domain.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinogalactan protein metabolic process","termid":"GO:0010405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"fasciclin-like arabinogalactan protein metabolic process","synonyms":[{"name":"fasciclin-like arabinogalactan protein metabolism","type":"exact"}],"termid":"GO:0010408"}


id: GO:0097391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 13 (CXCL13) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 13 production","synonyms":[{"name":"CXCL13 production","type":"exact"}],"termid":"GO:0097391"}


id: PBO:0078146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 25","termid":"PBO:0078146"}


id: GO:0044222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracytoplasmic membrane-bounded compartment in anaerobic ammonium oxidation (anammox) bacteria, is the site of anammox catabolism.","definition_xrefs":["PMID:19682260","GOC:dh","PMID:17993524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"anammoxosome","termid":"GO:0044222"}


id: PR:000050454
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein rnc1 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-50 of the amino acid sequence represented by UniProtKB:O74919. Example: UniProtKB:O74919, Thr-50, PR:000026291.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:31911490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe)","termid":"PR:000050452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnc1/UnPhos(T50)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: RNA-binding protein rnc1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rnc1/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74919, Thr-50, PR:000026291","type":"narrow"},{"name":"rnc1/UnPhos(T50)","type":"exact"}],"termid":"PR:000050454"}


id: PBO:0089782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in rescue of stalled ribosomes","termid":"PBO:0089782"}


id: PBO:0070847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 26","termid":"PBO:0070847"}


id: PBO:0027026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_histone_gene_mRNA_during_vegetative_growth","termid":"PBO:0027026"}


id: PBO:0027699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_rDNA_separation","termid":"PBO:0027699"}


id: PBO:0076198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 7","termid":"PBO:0076198"}


id: MONDO:0015834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bicornuate uterus","termid":"MONDO:0015842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"didelphys uterus","secondary_identifiers":["MEDGEN:82740","ICD9:752.2","Orphanet:180086","SCTID:15545001","GARD:20176","MedDRA:10012770","UMLS:C0266393"],"synonyms":[{"name":"Bicervical bicornuate uterus","type":"exact"}],"termid":"MONDO:0015834","xrefs":{"Monarch":{"xref_id":"0015834"}}}


id: PBO:0046392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial PAS domain protein 1","termid":"PBO:0046392"}


id: FYPO:0006275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pyknosis, the form of chromatin condensation typical of cell death by apoptosis, occurs at a greater frequency than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:18653539","PomBase:mah","GO:0030263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased pyknosis during stationary phase","synonyms":[{"name":"increased apoptotic chromosome condensation during stationary phase","type":"exact"}],"termid":"FYPO:0006275"}


id: PBO:0061963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 42","termid":"PBO:0061963"}


id: MONDO:1010514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Triploidy that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"triploidy, non-human animal","termid":"MONDO:1010031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triploidy, chicken","secondary_identifiers":["OMIA:001180-9031"],"termid":"MONDO:1010514","xrefs":{"Monarch":{"xref_id":"1010514"}}}


id: GO:0017000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibiotic biosynthetic process","synonyms":[{"name":"antibiotic anabolism","type":"exact"},{"name":"antibiotic biosynthesis","type":"exact"},{"name":"antibiotic formation","type":"exact"},{"name":"antibiotic synthesis","type":"exact"}],"termid":"GO:0017000"}


id: MONDO:0019980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bilateral renal hypoplasia is a form of renal hypoplasia, a renal developmental anomaly in which both kidneys are small and have a deficit in the number of nephrons present.","definition_xrefs":["Orphanet:97362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypoplasia","termid":"MONDO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypoplasia, bilateral","secondary_identifiers":["GARD:19374","MEDGEN:609099","SCTID:268232000","UMLS:C0431692","ICD10CM:Q60.4"],"termid":"MONDO:0019980","xrefs":{"Monarch":{"xref_id":"0019980"}}}


id: GO:1900977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tatiopterin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorus metabolic process","termid":"GO:0051174"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of tatiopterin metabolic process","synonyms":[{"name":"regulation of tatiopterin metabolism","type":"exact"}],"termid":"GO:1900977"}


id: PR:Q09857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general vesicular transport factor p115 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01822","PANTHER:PTHR10013:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracellular protein transport protein uso1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.03c","secondary_identifiers":["UniProtKB:Q09857"],"synonyms":[{"name":"Spom972h-USO1","type":"exact"}],"termid":"PR:Q09857"}


id: PBO:0041480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 86","termid":"PBO:0041480"}


id: MONDO:0100602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any spondyloepiphyseal dysplasia in which the cause of the disease is a variant in the COL2A1 gene. This includes spondyloepiphyseal dysplasia congenita, spondyloepiphyseal dysplasia with metatarsal shortening, and spondyloepiphyseal dysplasia with metaphyseal changes.","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"COL2A1-related spondyloepiphyseal dysplasia","termid":"MONDO:0100602","xrefs":{"Monarch":{"xref_id":"0100602"}}}


id: PBO:0067218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 285, pseudogene","termid":"PBO:0067218"}


id: FYPO:0005055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two and more than one septum, and the septa are grouped together between the two compartments, one or more of which may contain multiple nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binucleate multiseptate vegetative cell","termid":"FYPO:0001223"},{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell, septa grouped","termid":"FYPO:0001254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000032","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"binucleate multiseptate cell, septa grouped","synonyms":[{"name":"binucleate multiseptate cell, septa grouped during mitotic cell cycle","type":"related"},{"name":"binucleate multiseptate cell, septa grouped during vegetative growth","type":"exact"}],"termid":"FYPO:0005055"}


id: PBO:0086489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative oxidoreductase involved in late endosome to Golgi transport; physical and genetical interactions with Btn2p; null mutant is viable, has extended S phase, and sensitive to expression of top1-T722A allele; similar to human FOXRED1","termid":"PBO:0086489"}


id: MONDO:0016263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primitive neuroectodermal tumor that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primitive neuroectodermal tumor","termid":"MONDO:0005462"},{"relation_name":"is_a","term_name":"corpus uteri neoplasm","termid":"MONDO:0021254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primitive neuroectodermal tumor of the corpus uteri","secondary_identifiers":["UMLS:C4707724","Orphanet:213630","MEDGEN:1640822","GARD:20478"],"synonyms":[{"name":"body of uterus primitive neuroectodermal tumor","type":"exact"},{"name":"body of uterus primitive neuroectodermal tumour","type":"exact"},{"name":"malignant peripheral neuroectodermal tumor of the corpus uteri","type":"exact"},{"name":"malignant peripheral neuroectodermal tumour of the corpus uteri","type":"exact"},{"name":"peripheral neuroectodermal cancer of the corpus uteri","type":"exact"},{"name":"primitive neuroectodermal tumor of body of uterus","type":"exact"},{"name":"primitive neuroectodermal tumour of body of uterus","type":"exact"}],"termid":"MONDO:0016263","xrefs":{"Monarch":{"xref_id":"0016263"}}}


id: FYPO:0007616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to diuron. Cells stop growing (and may die) at a concentration of diuron that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to diuron","synonyms":[{"name":"sensitive to 3-(3,4-dichlorophenyl)-1,1-dimethylurea","type":"exact"},{"name":"sensitive to DCMU","type":"exact"},{"name":"sensitive to diuron during mitotic cell cycle","type":"related"},{"name":"sensitive to diuron during vegetative growth","type":"exact"}],"termid":"FYPO:0007616"}


id: MONDO:1010610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyroiditis that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroiditis, non-human animal","termid":"MONDO:1010059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroiditis, domestic guinea pig","secondary_identifiers":["OMIA:001005-10141"],"termid":"MONDO:1010610","xrefs":{"Monarch":{"xref_id":"1010610"}}}


id: GO:0071213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-aminocyclopropane-1-carboxylic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to 1-aminocyclopropane-1-carboxylic acid","termid":"GO:0009961"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 1-aminocyclopropane-1-carboxylic acid","termid":"GO:0071213"}


id: PBO:0058312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4685","termid":"PBO:0058312"}


id: PBO:0041092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and WD repeat domain containing 1","termid":"PBO:0041092"}


id: PBO:0078778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 3-2","termid":"PBO:0078778"}


id: PBO:0087099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal lysine methyltransferase; specific for monomethylation of Rpl42ap and Rpl42bp (lysine 55); nuclear SET-domain containing protein","termid":"PBO:0087099"}


id: PBO:0045106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diencephalon/mesencephalon homeobox 1","termid":"PBO:0045106"}


id: MONDO:0024338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucinous neoplasm","secondary_identifiers":["MEDGEN:235339","NCIT:C7070","UMLS:C1334811"],"synonyms":[{"name":"mucinous neoplasm","type":"exact"},{"name":"mucinous tumor","type":"exact"},{"name":"mucinous tumour","type":"exact"}],"termid":"MONDO:0024338","xrefs":{"Monarch":{"xref_id":"0024338"}}}


id: GO:0090128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of synapse maturation, the process that organizes a synapse so that it attains its fully functional state.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse maturation","termid":"GO:0090128"}


id: PBO:0081956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida glycoprotein 3","termid":"PBO:0081956"}


id: PBO:0057586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 891a","termid":"PBO:0057586"}


id: MOD:00802
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively converts an L-histidine residue to L-histidino vanadium tetraoxide","definition_xrefs":["PubMed:8552646","PubMed:16494433","RESID:AA0395","PubMed:10543953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vanadium containing modified residue","termid":"MOD:00772"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-histidino vanadium tetraoxide","synonyms":[{"name":"(4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl) (dihydroxy)dioxovanadium","type":"exact"},{"name":"1'-vanadato-L-histidine","type":"exact"},{"name":"L-histidino vanadium tetraoxide","type":"exact"},{"name":"N(tau)-vanadatohistidine","type":"exact"},{"name":"NtauH2VO4His","type":"exact"},{"name":"bromoperoxidase vanadium cofactor","type":"exact"},{"name":"chloroperoxidase vanadium cofactor","type":"exact"},{"name":"dihydrogen (4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl) (tetraoxido)vanadate","type":"exact"},{"name":"haloperoxidase vanadium cofactor","type":"exact"},{"name":"histidine-1-vanadate","type":"exact"},{"name":"histidine-N(epsilon)-vanadate","type":"exact"},{"name":"histidine-N1'-vanadate","type":"exact"},{"name":"tele-vanadatohistidine","type":"exact"}],"termid":"MOD:00802"}


id: MONDO:1011146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achondroplasia that occurs in water buffalo.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achondroplasia, non-human animal","termid":"MONDO:1010291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achondroplasia, water buffalo","secondary_identifiers":["OMIA:000004-89462"],"termid":"MONDO:1011146","xrefs":{"Monarch":{"xref_id":"1011146"}}}


id: PBO:0074084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 1","termid":"PBO:0074084"}


id: GO:0035921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["GOC:vk","GOC:BHF","ISBN:0198506732","PMID:9182671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desmosome organization","termid":"GO:0002934"},{"relation_name":"is_a","term_name":"cell-cell junction disassembly","termid":"GO:0150147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"desmosome disassembly","synonyms":[{"name":"desmosome dissociation","type":"exact"}],"termid":"GO:0035921"}


id: PBO:0050178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA lyase","termid":"PBO:0050178"}


id: MONDO:0003504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the anal canal. It includes well differentiated neuroendocrine tumors (low and intermediate grade) and poorly differentiated neuroendocrine carcinomas (high grade).","definition_xrefs":["NCIT:C5603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"rectum neuroendocrine neoplasm","termid":"MONDO:0003646"},{"relation_name":"is_a","term_name":"anal canal carcinoma","termid":"MONDO:0007108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal canal neuroendocrine neoplasm","secondary_identifiers":["UMLS:C1332273","MEDGEN:231063","SCTID:717917007","DOID:5545"],"synonyms":[{"name":"anal canal NET","type":"related"},{"name":"anal canal neuroendocrine neoplasm","type":"exact"},{"name":"anal canal neuroendocrine tumor","type":"related"},{"name":"anal canal neuroendocrine tumor, well differentiated, low or intermediate grade","type":"related"},{"name":"anal canal neuroendocrine tumour","type":"related"},{"name":"anal neuroendocrine neoplasm","type":"exact"},{"name":"anal neuroendocrine tumor","type":"related"},{"name":"anal neuroendocrine tumour","type":"related"},{"name":"anus neuroendocrine neoplasm","type":"exact"},{"name":"anus neuroendocrine tumor","type":"related"},{"name":"anus neuroendocrine tumour","type":"related"},{"name":"neuroendocrine neoplasm of anal canal","type":"exact"},{"name":"neuroendocrine neoplasm of anus","type":"exact"},{"name":"neuroendocrine neoplasm of the anus","type":"exact"},{"name":"neuroendocrine tumor of anus","type":"related"},{"name":"neuroendocrine tumour of anus","type":"related"}],"termid":"MONDO:0003504","xrefs":{"Monarch":{"xref_id":"0003504"}}}


id: PBO:0060231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid associated differentiation marker like (pseudogene)","termid":"PBO:0060231"}


id: PBO:0056352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP7 domain containing 1","termid":"PBO:0056352"}


id: PBO:0089261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic alanine-tRNA ligase Ala1","termid":"PBO:0089261"}


id: GO:0035121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of the tail are generated and organized. The tail is the hindmost part of some animals.","definition_xrefs":["ISBN:0198612001"],"gene_count":0,"genotype_count":0,"name":"obsolete tail morphogenesis (obsolete GO:0035121)","synonyms":[{"name":"tail morphogenesis","type":"exact"}],"termid":"GO:0035121"}


id: PR:P0CT54
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-alpha-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.10","synonyms":[{"name":"EF-1-alpha-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef102","type":"exact"}],"termid":"PR:P0CT54"}


id: GO:0170039
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id: FYPO:0002177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell has normal volume, dimensions and shape, and is viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"},{"relation_name":"is_a","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0000004","FYPO:0001312"],"is_obsolete":false,"name":"viable vegetative cell with normal cell morphology","synonyms":[{"name":"viable vegetative cell with normal cell shape and size","type":"exact"},{"name":"viable vegetative cell with normal morphology","type":"exact"}],"termid":"FYPO:0002177"}


id: PBO:0065758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin and HIN domain family member 1","termid":"PBO:0065758"}


id: MONDO:0017595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"aggressive B-cell non-Hodgkin lymphoma","secondary_identifiers":["GARD:21245","Orphanet:300846","MEDGEN:1791561","NCIT:C178541","UMLS:C5555120"],"synonyms":[{"name":"aggressive B-cell NHL","type":"exact"}],"termid":"MONDO:0017595","xrefs":{"Monarch":{"xref_id":"0017595"}}}


id: GO:0031495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mating type switching.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating type switching","termid":"GO:0031494"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mating type switching","synonyms":[{"name":"down regulation of mating type switching","type":"exact"},{"name":"down-regulation of mating type switching","type":"exact"},{"name":"downregulation of mating type switching","type":"exact"},{"name":"inhibition of mating type switching","type":"narrow"}],"termid":"GO:0031495"}


id: PBO:0088553
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp1","termid":"PBO:0088553"}


id: GO:1990719
data:
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id: PBO:0004447
data:
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id: GO:0045239
data:
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