# terms

id: MONDO:0024285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"heavy chain disease","termid":"MONDO:0019464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"epsilon-heavy chain disease","secondary_identifiers":["MEDGEN:543922","ICD9:273.2","UMLS:C0272254","SCTID:60620005"],"synonyms":[{"name":"IgE heavy chain disease","type":"related"}],"termid":"MONDO:0024285","xrefs":{"Monarch":{"xref_id":"0024285"}}}


id: CL:0002674
data:
  {"annotation_feature_type":"gene","cv_name":"cell","definition":"A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus.","definition_xrefs":["GOC:tfm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell","termid":"CL:0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H minus","termid":"CL:0002674"}


id: PBO:0003462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA processing protein (predicted)","termid":"PBO:0003462"}


id: MONDO:1012825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in pigs due to a mutation in the ABCA12 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, non-human animal","termid":"MONDO:1011427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, ABCA12-related, pig","secondary_identifiers":["OMIA:002238-9823"],"termid":"MONDO:1012825","xrefs":{"Monarch":{"xref_id":"1012825"}}}


id: MONDO:0018968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iniencephaly is a rare form of neural tube defect in which a malformation of the cervico-occipital junction is associated with a malformation of the central nervous system.","definition_xrefs":["Orphanet:63259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"iniencephaly","secondary_identifiers":["SCTID:2438005","MedDRA:10022034","ICD10CM:Q00.2","icd11.foundation:1558931335","GARD:10506","MEDGEN:57756","NCIT:C124549","ICD9:740.2","UMLS:C0152234"],"termid":"MONDO:0018968","xrefs":{"Monarch":{"xref_id":"0018968"}}}


id: PR:O74396
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps901 gene.","definition_xrefs":["UniProtKB:O74396","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 9a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.10","synonyms":[{"name":"Spom972h-vps901","type":"exact"},{"name":"vacuolar protein-targeting protein 9a (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74396"}


id: PBO:0074713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74D","termid":"PBO:0074713"}


id: GO:1905119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a haloperidol stimulus.","definition_xrefs":["GO_REF:0000071","PMID:24751813","GOC:dw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to haloperidol","termid":"GO:1905119"}


id: PBO:0062962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 5","termid":"PBO:0062962"}


id: GO:0090423
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98909],"is_not":false,"summary":null,"term":"GO:0090423"}]},"cv_name":"biological_process","definition":"A phytochelatin metabolic process in which a metal is incorporated with phytochelatin to form a complex.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytochelatin metabolic process","termid":"GO:0046937"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phytochelatin-metal complex formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"LWM phytochelatin complex formation","type":"related"},{"name":"low molecular weight phytochelatin complex formation","type":"related"}],"termid":"GO:0090423","terms_by_termid":{"GO:0090423":null}}


id: FYPO:0003714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to Skb1-containing lateral cortical nodes is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to lateral cortical node","termid":"FYPO:0003713"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to lateral cortical node, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cortical node abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003714"}


id: GO:0044175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell endosome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell endosome","termid":"GO:0044174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endosome membrane","synonyms":[{"name":"host endosome membrane","type":"exact"}],"termid":"GO:0044175"}


id: PBO:0068149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 456","termid":"PBO:0068149"}


id: PBO:0004873
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates spo12","termid":"PBO:0004873"}


id: PBO:0075089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 139","termid":"PBO:0075089"}


id: MONDO:0024504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually slow-growing, grade 1 pancreatic neuroendocrine tumor that secretes serotonin. When it metastasizes to the liver, it produces the clinical symptoms of the carcinoid syndrome.","definition_xrefs":["NCIT:C4446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor G1","termid":"MONDO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"enterochromaffin cell serotonin-producing pancreatic neuroendocrine tumor","secondary_identifiers":["Orphanet:506090","UMLS:C0345933","GARD:22055","MEDGEN:91057"],"synonyms":[{"name":"EC cell, serotonin producing pancreatic NET","type":"exact"},{"name":"EC cell, serotonin producing pancreatic neuroendocrine tumor","type":"exact"},{"name":"EC cell, serotonin producing pancreatic neuroendocrine tumour","type":"exact"},{"name":"carcinoid neoplasm of pancreas","type":"exact"},{"name":"carcinoid neoplasm of the pancreas","type":"exact"},{"name":"carcinoid tumor of pancreas","type":"exact"},{"name":"carcinoid tumor of the pancreas","type":"exact"},{"name":"carcinoid tumour of pancreas","type":"exact"},{"name":"carcinoid tumour of the pancreas","type":"exact"},{"name":"enterochromaffin cell serotonin-producing pancreatic neuroendocrine tumor","type":"exact"},{"name":"pancreatic carcinoid tumor","type":"exact"},{"name":"pancreatic carcinoid tumour","type":"exact"},{"name":"pancreatic serotonin producing neoplasm","type":"exact"},{"name":"pancreatic serotonin producing tumor","type":"exact"},{"name":"pancreatic serotonin producing tumour","type":"exact"},{"name":"serotonin-producing PNET","type":"exact"},{"name":"serotonin-producing neuroendocrine tumor of pancreas","type":"related"},{"name":"serotonin-producing neuroendocrine tumour of pancreas","type":"related"},{"name":"serotonin-producing pancreatic NET","type":"exact"},{"name":"serotonin-producing pancreatic neuroendocrine tumor","type":"exact"},{"name":"serotonin-producing pancreatic neuroendocrine tumour","type":"exact"},{"name":"serotonin-producing tumor of pancreas","type":"exact"},{"name":"serotonin-producing tumor of the pancreas","type":"exact"},{"name":"serotonin-producing tumour of pancreas","type":"exact"},{"name":"serotonin-producing tumour of the pancreas","type":"exact"}],"termid":"MONDO:0024504","xrefs":{"Monarch":{"xref_id":"0024504"}}}


id: PBO:0073075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHH signaling and ciliogenesis regulator SDCCAG8","termid":"PBO:0073075"}


id: PBO:0018177
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human B'd","termid":"PBO:0018177"}


id: MONDO:0024546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary hypertrophic osteoarthropathy in which the cause of the disease is a mutation in the HPGD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypertrophic osteoarthropathy","termid":"MONDO:0016620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, 1","secondary_identifiers":["GARD:15216","OMIM:259100","MEDGEN:1641972","UMLS:C4551679"],"synonyms":[{"name":"Cranioosteoarthropathy","type":"related"},{"name":"Currarino idiopathic osteoarthropathy","type":"related"},{"name":"HPGD primary hypertrophic osteoarthropathy","type":"exact"},{"name":"PDP, autosomal recessive","type":"related"},{"name":"PHOAR1","type":"related"},{"name":"Pho, autosomal recessive","type":"related"},{"name":"Touraine-Solente-Gole syndrome","type":"related"},{"name":"familial idiopathic osteoarthropathy of childhood","type":"related"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive 1","type":"exact"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, 1","type":"exact"},{"name":"pachydermoperiostosis, autosomal recessive","type":"related"},{"name":"primary hypertrophic osteoarthropathy caused by mutation in HPGD","type":"exact"}],"termid":"MONDO:0024546","xrefs":{"Monarch":{"xref_id":"0024546"}}}


id: FYPO:0009012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which a lower than normal proportion of cells is viable when the medium contains galactose as carbon source. In High Throughput Phenotyping this is typically assessed using phloxine as a dye.","definition_xrefs":["PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population viability","termid":"FYPO:0009007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"decreased vegetative cell population viability on galactose carbon source","synonyms":[{"name":"decreased viability on galactose carbon source","type":"broad"}],"termid":"FYPO:0009012"}


id: MONDO:1011809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple lipomatosis, non-human animal","secondary_identifiers":["OMIA:000606"],"termid":"MONDO:1011809","xrefs":{"Monarch":{"xref_id":"1011809"}}}


id: MONDO:1012053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital copper deficiency, non-human animal","termid":"MONDO:1011838"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital copper deficiency, goat","secondary_identifiers":["OMIA:000226-9925"],"termid":"MONDO:1012053","xrefs":{"Monarch":{"xref_id":"1012053"}}}


id: GO:0042933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine) from one side of a membrane to the other.","definition_xrefs":["GOC:jl","PMID:8837459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"dipeptide transmembrane transporter activity","termid":"GO:0071916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chrysobactin transmembrane transporter activity","synonyms":[{"name":"chrysobactin transporter activity","type":"related"}],"termid":"GO:0042933"}


id: GO:0018054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent modification of peptidyl-lysine by biotin to form peptidyl-N6-biotinyl-L-lysine.","definition_xrefs":["RESID:AA0117"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine biotinylation (obsolete GO:0018054)","termid":"GO:0018054"}


id: PBO:0055433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2863","termid":"PBO:0055433"}


id: PBO:0083599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; extensively overlaps essential NCB2 gene encoding the beta subunit of the NC2 dimeric histone-fold complex","termid":"PBO:0083599"}


id: PR:O13956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-rRNA-processing protein TSR1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein tsr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.15","secondary_identifiers":["UniProtKB:O13956"],"synonyms":[{"name":"Spom972h-TSR1","type":"exact"}],"termid":"PR:O13956"}


id: MONDO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"diabetic cataract","secondary_identifiers":["icd11.foundation:340836242","DOID:13328","ICD9:366.41","MEDGEN:507634","UMLS:C0011876","SCTID:43959009"],"synonyms":[{"name":"cataract - diabetic","type":"exact"}],"termid":"MONDO:0001687","xrefs":{"Monarch":{"xref_id":"0001687"}}}


id: GO:0031334
data:
  {"annotated_genes":["SJAG_00766","SJAG_00718","SJAG_00973","SJAG_01771","SJAG_01837","SJAG_03421","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104293,91494,118680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[107634,90048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001178"},{"annotations":[91553,81380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein complex assembly.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_00766":null,"SJAG_00973":null,"SJAG_01771":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein-containing complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein complex assembly","type":"narrow"},{"name":"positive regulation of protein complex assembly","type":"related"},{"name":"stimulation of protein complex assembly","type":"narrow"},{"name":"up regulation of protein complex assembly","type":"exact"},{"name":"up-regulation of protein complex assembly","type":"exact"},{"name":"upregulation of protein complex assembly","type":"exact"}],"termid":"GO:0031334","terms_by_termid":{"GO:0045899":null,"GO:1905561":null,"GO:2001178":null}}


id: PBO:0071623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 41","termid":"PBO:0071623"}


id: PBO:0058360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4733","termid":"PBO:0058360"}


id: PBO:0057497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 615","termid":"PBO:0057497"}


id: GO:0046027
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76345],"is_not":false,"summary":null,"term":"GO:0046027"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a glycerophospholipid + a 1,2-diacyl-sn-glycerol = a monoacylglycerophospholipid + a triacyl-sn-glycerol.","definition_xrefs":["RHEA:14057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phospholipid:diacylglycerol acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:2.3.1.158-RXN","EC:2.3.1.158"],"synonyms":[{"name":"PDAT activity","type":"related"},{"name":"phospholipid:1,2-diacyl-sn-glycerol O-acyltransferase activity","type":"related"}],"termid":"GO:0046027","terms_by_termid":{"GO:0046027":null}}


id: PBO:0078389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-4","termid":"PBO:0078389"}


id: PBO:0036282
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"identified from map position","termid":"PBO:0036282"}


id: GO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Progressive reduction in length of the telomeres, the termini of eukaryotic chromosomes, that occurs as part of the cellular aging process.","definition_xrefs":["GOC:jh","PMID:9891807"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent telomere shortening (obsolete GO:0001309)","synonyms":[{"name":"age-dependent telomere shortening","type":"exact"}],"termid":"GO:0001309"}


id: PR:O59735
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ceramide synthase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase lac1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.15c","secondary_identifiers":["UniProtKB:O59735"],"synonyms":[{"name":"SPBC3E7.15c","type":"related"},{"name":"Spom972h-CERS2","type":"exact"},{"name":"meiotically up-regulated gene 83 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mug83","type":"related"}],"termid":"PR:O59735"}


id: PBO:0071949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4 Y-linked 2","termid":"PBO:0071949"}


id: PBO:0051999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JARID2 divergent transcript","termid":"PBO:0051999"}


id: PBO:0046652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase activator","termid":"PBO:0046652"}


id: GO:0015556
data:
  {"annotated_genes":["SJAG_01406","SJAG_00671","SJAG_00522","SJAG_02140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000515"},{"annotations":[68911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[103574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[90250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[103577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of C4-dicarboxylate from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"C4-dicarboxylate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0015556","terms_by_termid":{"GO:0000515":null,"GO:0015131":null,"GO:0015140":null,"GO:0015366":null,"GO:0097434":null}}


id: GO:2000909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sterol import.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"regulates","term_name":"sterol import","termid":"GO:0035376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of sterol import","synonyms":[{"name":"regulation of sterol influx","type":"exact"},{"name":"regulation of sterol uptake","type":"exact"}],"termid":"GO:2000909"}


id: GO:0033253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of nuclease activity, the hydrolysis of a penicillin to yield a substituted beta-amino acid derivative.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of penicillinase activity (obsolete GO:0033253)","termid":"GO:0033253"}


id: PBO:0030751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcriptional_response_to_pheromone_at_normal_pheromone_level_(obsolete_FYPO:0000986)","termid":"PBO:0030751"}


id: GO:2001209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription elongation from RNA polymerase I promoter.","definition_xrefs":["PMID:20299458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription, elongation","termid":"GO:0032786"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase I","termid":"GO:0045943"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase I","termid":"GO:2001207"},{"relation_name":"positively_regulates","term_name":"transcription elongation by RNA polymerase I","termid":"GO:0006362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription elongation by RNA polymerase I","synonyms":[{"name":"positive regulation of RNA elongation from Pol I promoter","type":"exact"},{"name":"positive regulation of transcription elongation from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2001209"}


id: GO:0006296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The endonucleolytic cleavage of the damaged strand of DNA 5' to the site of damage. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. The incision follows the incision formed 3' to the site of damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA incision, 5'-to lesion (obsolete GO:0006296)","synonyms":[{"name":"nucleotide-excision repair, DNA incision, 5' to lesion","type":"exact"}],"termid":"GO:0006296"}


id: GO:0071706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of any member of the TNF superfamily due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"TNF superfamily production","type":"related"},{"name":"TNFSF cytokine production","type":"exact"}],"termid":"GO:0071706"}


id: GO:0043683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly from its constituent parts of a type IV pilus.","definition_xrefs":["PMID:31784891","GOC:ml","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus assembly","termid":"GO:0009297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"type IV pilus assembly","synonyms":[{"name":"type IV fimbria assembly","type":"exact"},{"name":"type IV fimbria biogenesis","type":"exact"},{"name":"type IV fimbriae assembly","type":"exact"},{"name":"type IV fimbriae biogenesis","type":"exact"},{"name":"type IV fimbrial assembly","type":"exact"},{"name":"type IV fimbrial biogenesis","type":"exact"},{"name":"type IV fimbrium assembly","type":"exact"},{"name":"type IV fimbrium biogenesis","type":"exact"},{"name":"type IV pilus biogenesis","type":"related"}],"termid":"GO:0043683"}


id: PR:O74927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.10","synonyms":[{"name":"Spom972h-met11","type":"exact"}],"termid":"PR:O74927"}


id: GO:0043020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A enzyme complex of which the core is a heterodimer composed of a light (alpha) and heavy (beta) chain, and requires the cytosolic regulatory subunits at least NCF1/p47-phox, NCF2/p67-phox, NCF4/p40-phox and the small GTPase RAC1 or RAC2 for activity. Functions in superoxide generation by the NADPH-dependent reduction of O2.","definition_xrefs":["PMID:11483596","PMID:12440767","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"NADPH oxidase complex","synonyms":[{"name":"flavocytochrome b558","type":"narrow"},{"name":"respiratory-burst oxidase","type":"related"}],"termid":"GO:0043020"}


id: GO:2000862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estrogen secretion","termid":"GO:2000861"},{"relation_name":"negatively_regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of estrogen secretion","synonyms":[{"name":"negative regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000862"}


id: GO:1900599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of demethylkotanin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"demethylkotanin metabolic process","termid":"GO:1900597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"demethylkotanin biosynthetic process","synonyms":[{"name":"demethylkotanin anabolism","type":"exact"},{"name":"demethylkotanin biosynthesis","type":"exact"},{"name":"demethylkotanin formation","type":"exact"},{"name":"demethylkotanin synthesis","type":"exact"}],"termid":"GO:1900599"}


id: PBO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Mdm31 (predicted)","termid":"PBO:0001246"}


id: PBO:0077359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 98","termid":"PBO:0077359"}


id: FYPO:0006611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized intermittently to the Cdr2 medial cortical node complex is associated with the complex less frequently than normal.","definition_xrefs":["PMID:29514920","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex","termid":"FYPO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex","synonyms":[{"name":"decreased frequency of bursts of intermittent protein localization to Cdr2 medial cortical node complex","type":"related"},{"name":"decreased frequency of protein localization bursts to Cdr2 medial cortical node complex","type":"related"},{"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"},{"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during transient localization to Cdr2 medial cortical node complex","type":"exact"},{"name":"decreased frequency of protein visits to Cdr2 medial cortical node complex","type":"related"},{"name":"reduced frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex","type":"exact"}],"termid":"FYPO:0006611"}


id: GO:0016287
data:
  {"annotated_genes":["SJAG_03305","SJAG_02654"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71843,72307],"is_not":false,"summary":null,"term":"GO:0016287"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + glycerone phosphate = 1-acylglycerone 3-phosphate + CoA.","definition_xrefs":["RHEA:17657","EC:2.3.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02654":null,"SJAG_03305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glycerone-phosphate O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01013","Reactome:R-HSA-75879","MetaCyc:2.3.1.42-RXN","Reactome:R-HSA-1483002"],"synonyms":[{"name":"acyl-CoA:glycerone-phosphate O-acyltransferase activity","type":"related"},{"name":"dihydroxyacetone phosphate acyltransferase activity","type":"related"}],"termid":"GO:0016287","terms_by_termid":{"GO:0016287":null}}


id: RO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite-of in which the parasite that cannot complete its life cycle without a host.","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obligate_parasite_of","termid":"RO:0002227"}


id: MONDO:0009250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fructose utilization (obsolete MONDO:0009250)","secondary_identifiers":["OMIM:229650"],"synonyms":[{"name":"fructose utilization","type":"exact"}],"termid":"MONDO:0009250","xrefs":{"Monarch":{"xref_id":"0009250"}}}


id: GO:0043063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the intracellular bridge. An intracellular bridge is a direct link between the cytoplasms of sister cells that allows cells to communicate with one another.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular structure organization","termid":"GO:0043062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intercellular bridge organization","synonyms":[{"name":"intercellular bridge organisation","type":"exact"},{"name":"intercellular bridge organization and biogenesis","type":"related"}],"termid":"GO:0043063"}


id: PBO:0075844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 5","termid":"PBO:0075844"}


id: GO:0052092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of nutrient release by host","termid":"GO:0052091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nutrient release by host","synonyms":[{"name":"activation by symbiont of nutrient release from host","type":"narrow"},{"name":"positive regulation by symbiont of nutrient release from host","type":"exact"},{"name":"promotion of nutrient release from host","type":"exact"},{"name":"stimulation by symbiont of nutrient release from host","type":"narrow"},{"name":"up regulation by symbiont of nutrient release from host","type":"exact"},{"name":"up-regulation by symbiont of nutrient release from host","type":"exact"},{"name":"upregulation by symbiont of nutrient release from host","type":"exact"}],"termid":"GO:0052092"}


id: GO:0046317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosylceramide.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ceramide biosynthetic process","termid":"GO:2000303"},{"relation_name":"regulates","term_name":"glucosylceramide biosynthetic process","termid":"GO:0006679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of glucosylceramide biosynthetic process","synonyms":[{"name":"regulation of glucosylceramide anabolism","type":"exact"},{"name":"regulation of glucosylceramide biosynthesis","type":"exact"},{"name":"regulation of glucosylceramide formation","type":"exact"},{"name":"regulation of glucosylceramide synthesis","type":"exact"}],"termid":"GO:0046317"}


id: MONDO:0008370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete reticular dystrophy of retinal pigment epithelium (obsolete MONDO:0008370)","termid":"MONDO:0008370","xrefs":{"Monarch":{"xref_id":"0008370"}}}


id: GO:0089701
data:
  {"annotated_genes":["SJAG_00225","SJAG_03995"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73977,78419],"is_not":false,"summary":null,"term":"GO:0089701"}]},"cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of conserved large and small U2AF subunits that contributes to spliceosomal RNA splicing by binding to consensus sequences at the 3' splice site. U2AF is required to stabilize the association of the U2 snRNP with the branch point.","definition_xrefs":["PMID:1538748","PMID:2963698","PMID:15231733","GOC:dos","PMID:8657565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00225":null,"SJAG_03995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U2AF complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"U2 accessory factor","type":"exact"},{"name":"U2AF","type":"exact"}],"termid":"GO:0089701","terms_by_termid":{"GO:0089701":null}}


id: GO:2001291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving codeine, an alkaloid found in the opium poppy, Papaver somniferum var. album. Codeine has analgesic, anti-tussive and anti-diarrhoeal properties.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"codeine metabolic process","synonyms":[{"name":"codeine metabolism","type":"exact"}],"termid":"GO:2001291"}


id: PBO:0067280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 361, pseudogene","termid":"PBO:0067280"}


id: GO:0097733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialised 9+0 non-motile cilium found in photoreceptor cells. A ciliary transition zone called 'photoreceptor connecting cilium' links the photoreceptor outer segment to the inner segment.","definition_xrefs":["GOC:cilia","Wikipedia:Photoreceptor_cell#Histology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"is_a","term_name":"9+0 non-motile cilium","termid":"GO:0097731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor cell cilium","synonyms":[{"name":"photoreceptor cilium","type":"exact"}],"termid":"GO:0097733"}


id: GO:0160003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon mono-ADP-ribosylation of the target protein.","definition_xrefs":["PMID:34023495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-D-ribose modification-dependent protein binding","termid":"GO:0160002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"mono-ADP-D-ribose modification-dependent protein binding","termid":"GO:0160003"}


id: GO:1990546
data:
  {"annotated_genes":["SJAG_01872","SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74319,73448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006843"}]},"cv_name":"biological_process","definition":"The process in which a tricarboxylic acid is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid transmembrane transport","termid":"GO:0035674"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mitochondrial tricarboxylic acid transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990546","terms_by_termid":{"GO:0006843":null}}


id: PBO:0062809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9","termid":"PBO:0062809"}


id: PBO:0047231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member C","termid":"PBO:0047231"}


id: PBO:0087954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination factor eRF3; has a role in mRNA deadenylation and decay; altered protein conformation creates the [PSI(+)] prion that modifies cellular fitness, alters translational fidelity by affecting reading frame selection, and results in a nonsense suppressor phenotype; many stress-response genes are repressed in the presence of [PSI(+)]","termid":"PBO:0087954"}


id: FYPO:0003235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K9 methylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K9me at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003235"}


id: GO:0071922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a process in which a cohesin complex is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:mah","PMID:17113138","GOC:lb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cohesin loading (obsolete GO:0071922)","synonyms":[{"name":"regulation of cohesin association with chromatin","type":"exact"},{"name":"regulation of cohesin localisation to chromatin","type":"exact"},{"name":"regulation of cohesin localization to chromatin","type":"exact"}],"termid":"GO:0071922"}


id: GO:0035889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a developing otolith to the kinocilia of tether cells in the inner ear.","definition_xrefs":["GOC:dgh","PMID:14499652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"otolith development","termid":"GO:0048840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otolith tethering","termid":"GO:0035889"}


id: MONDO:0003240
data:
  {"annotated_genes":["SJAG_04300","SJAG_02463","SJAG_01941","SJAG_03453","SJAG_04067","SJAG_03689","SJAG_01926","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007681"},{"annotations":[88332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007785"},{"annotations":[87753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026731"},{"annotations":[87524,87525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010134"},{"annotations":[89133,87690,89132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A disease involving the thyroid gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01926":null,"SJAG_01941":null,"SJAG_01970":null,"SJAG_02463":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_04067":null,"SJAG_04300":null},"genotype_count":0,"is_obsolete":false,"name":"thyroid gland disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:50","NCIT:C26893","EFO:1000627","SCTID:14304000","Wikipedia:Thyroid_disease","MEDGEN:1378579","UMLS:C4317107","ICD10CM:E00-E07","ICD9:240-246.99","ICD9:246.9","MESH:D013959","ICD9:246.8"],"synonyms":[{"name":"disease of thyroid gland","type":"exact"},{"name":"disease or disorder of thyroid gland","type":"exact"},{"name":"disorder of thyroid gland","type":"exact"},{"name":"thyroid disease","type":"exact"},{"name":"thyroid gland disease","type":"exact"},{"name":"thyroid gland disease or disorder","type":"exact"},{"name":"thyroid gland diseases","type":"exact"},{"name":"thyroid gland disorder","type":"exact"},{"name":"thyroid gland disorders","type":"exact"}],"termid":"MONDO:0003240","terms_by_termid":{"MONDO:0007681":null,"MONDO:0007785":null,"MONDO:0008566":null,"MONDO:0010134":null,"MONDO:0026731":null},"xrefs":{"Monarch":{"xref_id":"0003240"}}}


id: FYPO:0000991
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[121130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"},{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03689":null,"SJAG_04697":null},"genotype_count":2,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of substance in cell","references_by_uniquename":{"PMID:35226668":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_03689","SJAG_04697"],"single_locus_genotype_uniquenames":["dcr1delta","gms1delta"],"synonyms":[{"name":"reduced level of substance in cell","type":"exact"}],"termid":"FYPO:0000991","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0003727":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: GO:0031614
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits that form the peripheral lid of the regulatory particle of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle, lid subcomplex (obsolete GO:0031614)","termid":"GO:0031614"}


id: MONDO:1010351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Age-related macular degeneration that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age-related macular degeneration, non-human animal","secondary_identifiers":["OMIA:002142"],"termid":"MONDO:1010351","xrefs":{"Monarch":{"xref_id":"1010351"}}}


id: PBO:0091200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala","termid":"PBO:0091200"}


id: GO:1902188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of viral release from host cell.","definition_xrefs":["PMID:18305167","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of viral release from host cell (obsolete GO:1902188)","synonyms":[{"name":"activation of release of virus from host","type":"exact"},{"name":"activation of viral exit","type":"exact"},{"name":"activation of viral release","type":"exact"},{"name":"activation of viral release from host cell","type":"narrow"},{"name":"activation of viral shedding","type":"exact"},{"name":"positive regulation of release of virus from host","type":"exact"},{"name":"positive regulation of viral exit","type":"exact"},{"name":"positive regulation of viral release","type":"exact"},{"name":"positive regulation of viral shedding","type":"exact"},{"name":"up regulation of release of virus from host","type":"exact"},{"name":"up regulation of viral exit","type":"exact"},{"name":"up regulation of viral release","type":"exact"},{"name":"up regulation of viral release from host cell","type":"exact"},{"name":"up regulation of viral shedding","type":"exact"},{"name":"up-regulation of release of virus from host","type":"exact"},{"name":"up-regulation of viral exit","type":"exact"},{"name":"up-regulation of viral release","type":"exact"},{"name":"up-regulation of viral release from host cell","type":"exact"},{"name":"up-regulation of viral shedding","type":"exact"},{"name":"upregulation of release of virus from host","type":"exact"},{"name":"upregulation of viral exit","type":"exact"},{"name":"upregulation of viral release","type":"exact"},{"name":"upregulation of viral release from host cell","type":"exact"},{"name":"upregulation of viral shedding","type":"exact"}],"termid":"GO:1902188"}


id: GO:0071582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of zinc ions (Zn2+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"is_a","term_name":"regulation of zinc ion transport","termid":"GO:0071579"},{"relation_name":"negatively_regulates","term_name":"zinc ion transport","termid":"GO:0006829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of zinc ion transport","termid":"GO:0071582"}


id: PBO:0043141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 9","termid":"PBO:0043141"}


id: PBO:0000703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR family","termid":"PBO:0000703"}


id: PBO:0028183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_zinc","termid":"PBO:0028183"}


id: MONDO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine exophthalmos","termid":"MONDO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotoxic exophthalmos","secondary_identifiers":["UMLS:C0155265","MEDGEN:509883","ICD9:376.21","SCTID:19885005","DOID:12362"],"termid":"MONDO:0001511","xrefs":{"Monarch":{"xref_id":"0001511"}}}


id: PBO:0072165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 2","termid":"PBO:0072165"}


id: PBO:0045634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 46 (pseudogene)","termid":"PBO:0045634"}


id: MONDO:0008439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia-epilepsy-intellectual disability syndrome","secondary_identifiers":["OMIM:182610","MESH:C536869","GARD:4915","UMLS:C1866854","MEDGEN:356631","Orphanet:2816"],"synonyms":[{"name":"SPEMR","type":"exact"},{"name":"spastic paraplegia epilepsy intellectual disability","type":"related"},{"name":"spastic paraplegia epilepsy mental retardation","type":"related"},{"name":"spastic paraplegia, epilepsy, and intellectual disability","type":"related"},{"name":"spastic paraplegia, epilepsy, and mental retardation","type":"related"},{"name":"spemr","type":"related"}],"termid":"MONDO:0008439","xrefs":{"Monarch":{"xref_id":"0008439"}}}


id: GO:0044298
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane of a cell that bears surface projections such as axons, dendrites, cilia, or flagella, excluding the plasma membrane on cell projections.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"cell body","termid":"GO:0044297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cell body membrane","synonyms":[{"name":"cell soma membrane","type":"exact"}],"termid":"GO:0044298"}


id: GO:0000030
data:
  {"annotated_genes":["SJAG_01021","SJAG_00334","SJAG_00747","SJAG_04770","SJAG_03555","SJAG_03953","SJAG_02519","SJAG_04053","SJAG_03115","SJAG_00598","SJAG_01264","SJAG_00437","SJAG_00816","SJAG_04316","SJAG_02102","SJAG_05327","SJAG_02903","SJAG_03082","SJAG_00295","SJAG_04952","SJAG_01276","SJAG_02168","SJAG_01491","SJAG_03878","SJAG_04878","SJAG_04906","SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77252,97136],"is_not":false,"summary":null,"term":"GO:0000030"},{"annotations":[79807,76592,76747,76463,77273,81147,79316,78764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000026"},{"annotations":[82247,73781,71815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000009"},{"annotations":[69630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004578"},{"annotations":[78390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052925"},{"annotations":[63416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052926"},{"annotations":[63415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052918"},{"annotations":[61702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052917"},{"annotations":[58988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004582"},{"annotations":[76721,78997,71615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004169"},{"annotations":[61356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004378"},{"annotations":[61357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102704"},{"annotations":[78639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004377"},{"annotations":[104964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180041"},{"annotations":[89332,93078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033164"},{"annotations":[97612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0103064"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:cjm","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_00334":null,"SJAG_00437":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01491":null,"SJAG_02102":null,"SJAG_02168":null,"SJAG_02519":null,"SJAG_02903":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03115":null,"SJAG_03555":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04053":null,"SJAG_04316":null,"SJAG_04770":null,"SJAG_04878":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_05327":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162797","Reactome:R-HSA-162830","Reactome:R-HSA-4720497","Reactome:R-HSA-446198"],"termid":"GO:0000030","terms_by_termid":{"GO:0000009":null,"GO:0000026":null,"GO:0000030":null,"GO:0004169":null,"GO:0004377":null,"GO:0004378":null,"GO:0004578":null,"GO:0004582":null,"GO:0033164":null,"GO:0052917":null,"GO:0052918":null,"GO:0052925":null,"GO:0052926":null,"GO:0102704":null,"GO:0103064":null,"GO:0180041":null}}


id: SO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified cytosine DNA base feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_cytosine","termid":"SO:0001963"}


id: GO:1904256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of an iron transmembrane transporter activity.","definition_xrefs":["GOC:kom","PMID:15514116","GOC:BHF","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of iron ion transmembrane transporter activity (obsolete GO:1904256)","synonyms":[{"name":"activation of iron cation channel activity","type":"narrow"},{"name":"activation of iron channel activity","type":"narrow"},{"name":"activation of iron-specific channel activity","type":"narrow"},{"name":"positive regulation of iron cation channel activity","type":"exact"},{"name":"positive regulation of iron channel activity","type":"exact"},{"name":"positive regulation of iron transmembrane transporter activity","type":"exact"},{"name":"positive regulation of iron-specific channel activity","type":"exact"},{"name":"up regulation of iron cation channel activity","type":"exact"},{"name":"up regulation of iron channel activity","type":"exact"},{"name":"up regulation of iron-specific channel activity","type":"exact"},{"name":"up-regulation of iron cation channel activity","type":"exact"},{"name":"up-regulation of iron channel activity","type":"exact"},{"name":"up-regulation of iron-specific channel activity","type":"exact"},{"name":"upregulation of iron cation channel activity","type":"exact"},{"name":"upregulation of iron channel activity","type":"exact"},{"name":"upregulation of iron-specific channel activity","type":"exact"}],"termid":"GO:1904256"}


id: PBO:0042530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5 pseudogene 1","termid":"PBO:0042530"}


id: PATO:0001450
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of extracellular fluid.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edematous","synonyms":[{"name":"edema","type":"narrow"},{"name":"edemic","type":"exact"},{"name":"oedema","type":"narrow"},{"name":"oedematous","type":"exact"},{"name":"oedemic","type":"exact"}],"termid":"PATO:0001450"}


id: GO:0051620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of norepinephrine into a cell, typically presynaptic neurons or glial cells. Norepinephrine (3,4-dihydroxyphenyl-2-aminoethanol) is a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine transport","termid":"GO:0015874"},{"relation_name":"is_a","term_name":"catecholamine uptake","termid":"GO:0090493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"norepinephrine uptake","synonyms":[{"name":"levarterenol reuptake","type":"exact"},{"name":"levarterenol uptake","type":"exact"},{"name":"noradrenaline reuptake","type":"exact"},{"name":"noradrenaline uptake","type":"exact"},{"name":"norepinephrine import","type":"exact"},{"name":"norepinephrine reuptake","type":"exact"}],"termid":"GO:0051620"}


id: PBO:0039445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKHD1-EIF4EBP3 readthrough","termid":"PBO:0039445"}


id: _global:edited_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edited_to","termid":"_global:edited_to"}


id: PBO:0064846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 13 like","termid":"PBO:0064846"}


id: PBO:0028764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_periphery_during_cellular_response_to_heat","termid":"PBO:0028764"}


id: PATO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of whether the bearer's disposition to perceive differences between two or more stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discrimination","termid":"PATO:0000189"}


id: GO:0043954
data:
  {"annotated_genes":["SJAG_03812","SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071788"},{"annotations":[99173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062195"}]},"cv_name":"biological_process","definition":"The organization process that preserves a cellular component in a stable functional or structural state.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03812":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular component maintenance","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0071956"],"synonyms":[{"name":"cellular component maintenance at cellular level","type":"exact"}],"termid":"GO:0043954","terms_by_termid":{"GO:0062195":null,"GO:0071788":null}}


id: GO:0052634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a C-19 gibberellin + 2-oxoglutarate + O2 = a C-19 2-beta-hydroxygibberellin + succinate + CO2. C-19 gibberellin refers to a gibberellin with nineteen carbons.","definition_xrefs":["PMID:12509528","GOC:kad"],"gene_count":0,"genotype_count":0,"name":"obsolete C-19 gibberellin 2-beta-dioxygenase activity (obsolete GO:0052634)","synonyms":[{"name":"(C-19 gibberellin-1),2-oxoglutarate:oxygen oxidoreductase (2beta-hydroxylating)","type":"exact"},{"name":"C(19) gibberellin 2-oxidase activity","type":"exact"},{"name":"C-19 GA 2-oxidase activity","type":"exact"},{"name":"C-19 gibberellin 2-beta-hydroxylase activity","type":"exact"},{"name":"C-19 gibberellin 2-oxidase activity","type":"exact"},{"name":"C-19 gibberellin 2beta-dioxygenase activity","type":"exact"},{"name":"C-19 gibberellin 2beta-hydroxylase activity","type":"exact"}],"termid":"GO:0052634"}


id: MONDO:1010730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any severe combined immunodeficiency disease in golden hamsters in which the cause of the disease is a mutation in the IL2RG gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency disease, non-human animal","termid":"MONDO:1011422"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked severe combined immunodeficiency disease, IL2RG-related, golden hamster","secondary_identifiers":["OMIA:000899-10036"],"termid":"MONDO:1010730","xrefs":{"Monarch":{"xref_id":"1010730"}}}


id: MONDO:0003201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esophagus adenocarcinoma (obsolete MONDO:0003201)","termid":"MONDO:0003201","xrefs":{"Monarch":{"xref_id":"0003201"}}}


id: GO:0006073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues, occurring at the level of an individual cell.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular glucan metabolic process (obsolete GO:0006073)","synonyms":[{"name":"cellular glucan metabolism","type":"exact"}],"termid":"GO:0006073"}


id: FYPO:0004529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mitochondrial translation","synonyms":[{"name":"normal mitochondrial protein biosynthesis","type":"exact"},{"name":"normal mitochondrial protein synthesis","type":"exact"},{"name":"normal mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial translation during vegetative growth","type":"exact"}],"termid":"FYPO:0004529"}


id: PBO:0051963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPRIP like 1","termid":"PBO:0051963"}


id: PBO:0057061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 145","termid":"PBO:0057061"}


id: GO:0060749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammary gland alveolus over time, from its formation to its mature state. The mammary gland alveolus is a sac-like structure that is found in the mature gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammary gland lobule development","termid":"GO:0061377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland alveolus development","termid":"GO:0060749"}


id: GO:0050565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N2-citryl-N6-acetyl-N6-hydroxy-L-lysine + N6-acetyl-N6-hydroxy-L-lysine = aerobactin + AMP + diphosphate + H+.","definition_xrefs":["RHEA:32167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aerobactin synthase activity","synonyms":[{"name":"citrate:6-N-acetyl-6-N-hydroxy-L-lysine ligase (ADP-forming)","type":"exact"},{"name":"citrate:N6-acetyl-N6-hydroxy-L-lysine ligase (ADP-forming)","type":"exact"}],"termid":"GO:0050565"}


id: GO:0044071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the normal progression through the host cell cycle. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell cycle progression","secondary_identifiers":["VZ:1636"],"synonyms":[{"name":"modification by symbiont of host cell cycle","type":"exact"},{"name":"modulation by symbiont of host cell cycle","type":"exact"},{"name":"modulation of host cell cycle by symbiont","type":"exact"},{"name":"perturbation of host cell cycle progression","type":"exact"},{"name":"regulation by symbiont of host cell cycle","type":"exact"}],"termid":"GO:0044071"}


id: GO:0072094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between cells of the ureteric bud terminus and the kidney mesenchyme that positively regulates the formation of the metanephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle induction","termid":"GO:0072034"},{"relation_name":"is_a","term_name":"positive regulation of metanephros development","termid":"GO:0072216"},{"relation_name":"positively_regulates","term_name":"metanephric renal vesicle formation","termid":"GO:0072093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle induction","synonyms":[{"name":"positive regulation of metanephros formation","type":"broad"}],"termid":"GO:0072094"}


id: PBO:0055499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2933","termid":"PBO:0055499"}


id: GO:0043290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of apocarotenoids, a class of compounds derived from the oxidative cleavage of carotenoids, many of which are biologically important e.g. retinal and abscisic acid.","definition_xrefs":["PMID:34956282","GOC:jl","PMID:33721905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"},{"relation_name":"is_a","term_name":"apocarotenoid metabolic process","termid":"GO:0043288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"apocarotenoid catabolic process","synonyms":[{"name":"apo carotenoid catabolic process","type":"exact"},{"name":"apocarotenoid breakdown","type":"exact"},{"name":"apocarotenoid catabolism","type":"exact"},{"name":"apocarotenoid degradation","type":"exact"}],"termid":"GO:0043290"}


id: PBO:0027893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_unseparated_DNA_and_centromeric_DNA_dissociated_from_spindle","termid":"PBO:0027893"}


id: GO:0038173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-17A binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:jc","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-17A-mediated signaling pathway","synonyms":[{"name":"IL-17A-mediated signaling pathway","type":"exact"},{"name":"IL17A signaling pathway","type":"exact"},{"name":"interleukin-17A signaling pathway","type":"related"},{"name":"interleukin-17A-mediated signalling pathway","type":"exact"}],"termid":"GO:0038173"}


id: PBO:0051992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Janus kinase and microtubule interacting protein 3","termid":"PBO:0051992"}


id: PBO:0027086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_midzone_during_anaphase","termid":"PBO:0027086"}


id: MONDO:1010236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syringomyelia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomyelia, non-human animal","secondary_identifiers":["OMIA:000965"],"termid":"MONDO:1010236","xrefs":{"Monarch":{"xref_id":"1010236"}}}


id: PBO:0043473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 10","termid":"PBO:0043473"}


id: GO:0047140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidized glutathione + CoA = reduced glutathione + CoA-glutathione.","definition_xrefs":["MetaCyc:1.8.4.3-RXN","EC:1.8.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glutathione-CoA-glutathione transhydrogenase activity","secondary_identifiers":["RHEA:13125"],"synonyms":[{"name":"CoA:glutathione-disulfide oxidoreductase activity","type":"related"},{"name":"coenzyme A:glutathione-disulfide oxidoreductase activity","type":"related"},{"name":"coenzyme A:oxidized-glutathione oxidoreductase activity","type":"related"},{"name":"glutathione coenzyme A-glutathione transhydrogenase activity","type":"related"},{"name":"glutathione-coenzyme A glutathione disulfide transhydrogenase activity","type":"related"},{"name":"glutathione:coenzyme A-glutathione transhydrogenase activity","type":"related"}],"termid":"GO:0047140"}


id: GO:2000555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 1 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell cytokine production","termid":"GO:0002725"},{"relation_name":"is_a","term_name":"negative regulation of T-helper 1 type immune response","termid":"GO:0002826"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell cytokine production","termid":"GO:2000554"},{"relation_name":"negatively_regulates","term_name":"T-helper 1 cell cytokine production","termid":"GO:0035744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T-helper 1 cell cytokine production","synonyms":[{"name":"negative regulation of Th1 cell cytokine production","type":"exact"}],"termid":"GO:2000555"}


id: GO:0006789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bilirubin monoglucuronide or bilirubin diglucuronide, water-soluble derivatives of bilirubin.","definition_xrefs":["DOI:10.1016/0305-0491(80)90243-6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound catabolic process","termid":"GO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"bilirubin conjugation","termid":"GO:0006789"}


id: PBO:0073231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SENP3-EIF4A1 readthrough (NMD candidate)","termid":"PBO:0073231"}


id: GO:0015799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of propanediol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Propanediol is a sweet colorless, viscous, hygroscopic liquid used as an antifreeze and in brake fluid; it is also as a humectant in cosmetics and personal care items, although it can be absorbed through the skin with harmful effects.","definition_xrefs":["PMID:24002752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"propanediol transport","termid":"GO:0015799"}


id: MONDO:0024240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma with eccrine differentiation arising from the sweat glands. It includes the following subtypes: ductal eccrine adenocarcinoma, papillary eccrine carcinoma, and eccrine porocarcinoma.","definition_xrefs":["NCIT:C27255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine sweat gland cancer","termid":"MONDO:0005506"},{"relation_name":"is_a","term_name":"sweat gland carcinoma","termid":"MONDO:0005524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"eccrine carcinoma","secondary_identifiers":["SCTID:400173004","MEDGEN:724404","UMLS:C1302864","DOID:4920","ICDO:8413/3"],"synonyms":[{"name":"carcinoma of eccrine sweat gland","type":"exact"},{"name":"carcinoma, eccrine gland, malignant","type":"exact"},{"name":"eccrine adenocarcinoma","type":"exact"},{"name":"eccrine adenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"eccrine carcinoma","type":"exact"},{"name":"eccrine carcinoma of skin","type":"exact"},{"name":"eccrine sweat gland adenocarcinoma","type":"exact"},{"name":"eccrine sweat gland carcinoma","type":"exact"}],"termid":"MONDO:0024240","xrefs":{"Monarch":{"xref_id":"0024240"}}}


id: GO:0000175
data:
  {"annotated_genes":["SJAG_00081","SJAG_04407","SJAG_03876","SJAG_03745","SJAG_04006","SJAG_02993","SJAG_04818","SJAG_04824","SJAG_00401","SJAG_02540","SJAG_04369","SJAG_01822","SJAG_01836","SJAG_06586","SJAG_00966","SJAG_01798","SJAG_03132","SJAG_00841","SJAG_04084","SJAG_04153","SJAG_04519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63756,67854,71688,72384,76370,81265,81521,91824,100841,104005,105593,106339,107209,120340],"is_not":false,"summary":null,"term":"GO:0000175"},{"annotations":[116431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[79252,109739,76022,80604,118612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[70121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5' exonuclease activity","termid":"GO:0008408"},{"relation_name":"is_a","term_name":"RNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016896"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00401":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_02540":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04519":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140098","GO:0016788","GO:0004527","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"3'-5'-RNA exonuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9836585","Reactome:R-HSA-9935824","Reactome:R-HSA-6791222","Reactome:R-HSA-9933585","Reactome:R-HSA-430028","Reactome:R-HSA-9836822","Reactome:R-HSA-9934763","Reactome:R-HSA-9682603","Reactome:R-HSA-9694632","Reactome:R-HSA-9822437"],"synonyms":[{"name":"3'-5' exoribonuclease activity","type":"exact"},{"name":"3'-5'-exoribonuclease activity","type":"exact"}],"termid":"GO:0000175","terms_by_termid":{"GO:0000175":null,"GO:0004535":null,"GO:0008859":null,"GO:1990838":null}}


id: PBO:0064492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit E","termid":"PBO:0064492"}


id: MONDO:0009897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult polyglucosan body disease (APBD) is a glycogen storage disease of adults characterized by progressive upper and lower motor neuron dysfunction, progressive neurogenic bladder and cognitive difficulties that can lead to dementia.","definition_xrefs":["Orphanet:206583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to glycogen branching enzyme deficiency","termid":"MONDO:0009292"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"adult polyglucosan body disease","secondary_identifiers":["GARD:108","MESH:C564878","NANDO:2201163","SCTID:721099001","OMIM:263570","UMLS:C1849722","NORD:1591","MEDGEN:342338"],"synonyms":[{"name":"APBD","type":"exact"},{"name":"APBN","type":"related"},{"name":"polyglucosan body disease, adult","type":"related"},{"name":"polyglucosan body disease, adult form","type":"related"},{"name":"polyglucosan body neuropathy, adult form","type":"related"}],"termid":"MONDO:0009897","xrefs":{"Monarch":{"xref_id":"0009897"}}}


id: PBO:0030920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_phenotype","termid":"PBO:0030920"}


id: MONDO:0037398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pulmonary disease characterized by primary or nonbacteremic pneumonia most frequently arising in an intensive care setting, or bacteremic pneumonia, which is typically associated with neutropenia. Chronic lower respiratory tract infection with development of episodes of pneumonia is common in patients with cystic fibrosis. Acute infections are potentially life-threatening. Patients present with fever, chills, dyspnea, cyanosis, productive cough, as well as signs of severe systemic toxicity. Alveolar hemorrhage, necrosis, and, eventually, cavity formation, are commonly seen.","definition_xrefs":["Orphanet:90066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"Pseudomonas aeruginosa infectious disease","termid":"MONDO:0040732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia caused by pseudomonas aeruginosa infection","secondary_identifiers":["GARD:13613","icd11.foundation:801706385","MEDGEN:852026","UMLS:C0920182"],"termid":"MONDO:0037398","xrefs":{"Monarch":{"xref_id":"0037398"}}}


id: MONDO:0700164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nephroblastoma occurring in a dog.","definition_xrefs":["NCIT:C158786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine nephroblastoma","termid":"MONDO:0700164","xrefs":{"Monarch":{"xref_id":"0700164"}}}


id: MONDO:0001959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labyrinthine bilateral reactive loss","secondary_identifiers":["DOID:14413","SCTID:194377001","MEDGEN:510006","UMLS:C0155520","ICD9:386.56"],"synonyms":[{"name":"bilateral loss of labyrinthine reactivity","type":"exact"},{"name":"loss of labyrinthine reactivity, bilateral","type":"exact"}],"termid":"MONDO:0001959","xrefs":{"Monarch":{"xref_id":"0001959"}}}


id: GO:0005731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of a chromosome where nucleoli form during interphase, and where genes encoding the largest rRNA precursor transcript are tandemly arrayed.","definition_xrefs":["PMID:14504406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleolar chromatin","termid":"GO:0030874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005575","GO:0005730"],"is_obsolete":false,"name":"nucleolus organizer region","secondary_identifiers":["Wikipedia:Nucleolus_organizer_region"],"synonyms":[{"name":"NOR","type":"exact"},{"name":"nucleolus organiser region","type":"exact"},{"name":"nucleolus organizer complex","type":"related"}],"termid":"GO:0005731"}


id: PBO:0014279
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MET3","termid":"PBO:0014279"}


id: MONDO:0003224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spindle cell hemangioma (obsolete MONDO:0003224)","termid":"MONDO:0003224","xrefs":{"Monarch":{"xref_id":"0003224"}}}


id: PBO:0068139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 446","termid":"PBO:0068139"}


id: MONDO:1011953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, non-human animal","secondary_identifiers":["OMIA:000937"],"termid":"MONDO:1011953","xrefs":{"Monarch":{"xref_id":"1011953"}}}


id: MONDO:0011165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fibronectin glomerulopathy in which the cause of the disease is a mutation in the FN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibronectin glomerulopathy","termid":"MONDO:0007671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"glomerulopathy with fibronectin deposits 2","secondary_identifiers":["GARD:9914","SCTID:722759007","OMIM:601894","MEDGEN:356149","UMLS:C1866075"],"synonyms":[{"name":"FN1 fibronectin glomerulopathy","type":"exact"},{"name":"GFND2","type":"related"},{"name":"fibronectin glomerulopathy","type":"related"},{"name":"fibronectin glomerulopathy caused by mutation in FN1","type":"exact"},{"name":"glomerular nephritis familial with fibronectin deposits","type":"related"},{"name":"glomerular nephritis, familial, with fibronectin deposits","type":"related"},{"name":"glomerulopathy with fibronectin deposits 2","type":"exact"},{"name":"glomerulopathy with fibronectin deposits type 2","type":"exact"}],"termid":"MONDO:0011165","xrefs":{"Monarch":{"xref_id":"0011165"}}}


id: GO:0015640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of peptidoglycan peptides from one side of a membrane to the other. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan transmembrane transporter activity","termid":"GO:0015647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"peptidoglycan peptide transmembrane transporter activity","synonyms":[{"name":"murein peptide transporter activity","type":"exact"},{"name":"muropeptide transporter activity","type":"exact"}],"termid":"GO:0015640"}


id: PBO:0059366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18B pseudogene 1","termid":"PBO:0059366"}


id: PBO:0002129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein farnesyltransferase beta subunit Cpp1","termid":"PBO:0002129"}


id: MONDO:0019988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pauci-immune glomerulonephritis (GN) with antineutrophil cytoplasmic antibodies (ANCA) is a form of rapidly progressive GN comprising about 90% of pauci-immune glomerulonephritis, and associated with the presence of circulating ANCA (mostly directed against proteinase-3 (PR3) and myeloperoxidase (MPO)). Patients usually present with hematuria and rapidly declining renal function, often leading to dialysis within weeks without treatment. Cutaneous, pulmonary, musculoskeletal and nervous involvement may be observed in case of systemic disease, and the correlation between ANCA titer and disease activity has been demonstrated.","definition_xrefs":["Orphanet:97563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pauci-immune glomerulonephritis","termid":"MONDO:0019641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pauci-immune glomerulonephritis with ANCA","secondary_identifiers":["UMLS:C5680254","MEDGEN:1843351","GARD:19379"],"synonyms":[{"name":"pauci-immune glomerulonephritis with antineutrophil cytoplasmic antibody","type":"exact"}],"termid":"MONDO:0019988","xrefs":{"Monarch":{"xref_id":"0019988"}}}


id: PBO:0078415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-1","termid":"PBO:0078415"}


id: MONDO:0019609
data:
  {"annotated_genes":["SJAG_05950","SJAG_00702","SJAG_01165","SJAG_03781","SJAG_02788","SJAG_02693","SJAG_00326","SJAG_03440","SJAG_04763","SJAG_02997","SJAG_04146","SJAG_03324","SJAG_00891","SJAG_02619"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013948"},{"annotations":[88713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054549"},{"annotations":[89070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013949"},{"annotations":[89068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013950"},{"annotations":[89071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013951"},{"annotations":[89072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013952"},{"annotations":[89029,89030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013967"},{"annotations":[88676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008953"},{"annotations":[89020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011101"},{"annotations":[88665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008954"},{"annotations":[88934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008736"},{"annotations":[89052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013927"},{"annotations":[89054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013930"},{"annotations":[89055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013931"},{"annotations":[89057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013936"},{"annotations":[89059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013937"},{"annotations":[89060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013938"},{"annotations":[89058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013939"},{"annotations":[89063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013942"},{"annotations":[89061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013943"},{"annotations":[89066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013945"},{"annotations":[88137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009959"}]},"cv_name":"mondo","definition":"The most severe variant seen in the peroxisome biogenesis disorders that is characterized by neuronal migration defects in the brain, dysmorphic craniofacial features, profound hypotonia, neonatal seizures, and liver dysfunction.","definition_xrefs":["Orphanet:912"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02788":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04763":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0005244","MONDO:0019053","MONDO:0006025"],"is_obsolete":false,"name":"Zellweger spectrum disorders","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:905","NORD:1876","GARD:7917","SCTID:88469006","NANDO:1200760","MESH:D015211","ICD10CM:E71.510","UMLS:C0043459","MEDGEN:21958","NCIT:C85239"],"synonyms":[{"name":"ZS","type":"exact"},{"name":"ZWS","type":"exact"},{"name":"Zellweger leukodystrophy","type":"related"},{"name":"Zellweger spectrum disorders","type":"exact"},{"name":"Zellweger syndrome","type":"exact"},{"name":"cerebrohepatorenal syndrome","type":"exact"},{"name":"congenital iron overload","type":"exact"}],"termid":"MONDO:0019609","terms_by_termid":{"MONDO:0008736":null,"MONDO:0008953":null,"MONDO:0008954":null,"MONDO:0009959":null,"MONDO:0011101":null,"MONDO:0013927":null,"MONDO:0013930":null,"MONDO:0013931":null,"MONDO:0013936":null,"MONDO:0013937":null,"MONDO:0013938":null,"MONDO:0013939":null,"MONDO:0013942":null,"MONDO:0013943":null,"MONDO:0013945":null,"MONDO:0013948":null,"MONDO:0013949":null,"MONDO:0013950":null,"MONDO:0013951":null,"MONDO:0013952":null,"MONDO:0013967":null,"MONDO:0054549":null},"xrefs":{"Monarch":{"xref_id":"0019609"}}}


id: GO:0140602
data:
  {"annotated_genes":["SJAG_04140","SJAG_03161","SJAG_04768","SJAG_01186","SJAG_04855","SJAG_04645","SJAG_00178","SJAG_03745","SJAG_03543","SJAG_04187","SJAG_04055","SJAG_01805","SJAG_03300","SJAG_00436","SJAG_01837","SJAG_03048","SJAG_04601","SJAG_00082","SJAG_00302","SJAG_00335","SJAG_01408","SJAG_01374","SJAG_00471"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60640,89314,90837,91833,92797,94096,95656,100932,104188,104270,106129,106223,106933,107320,107685,113173,114030,114585,114586,114587,116893,117493,118670],"is_not":false,"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"Inclusion bodies located at the nucleolar periphery where several nuclear factors are reversibly aggregated and sequestered during acute heat stress or starvation.","definition_xrefs":["PMID:37128864","PMID:33176152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear inclusion body","termid":"GO:0042405"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00436":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleolar peripheral inclusion body","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"NuRs","type":"exact"},{"name":"nucleolar rings","type":"exact"}],"termid":"GO:0140602","terms_by_termid":{"GO:0140602":null}}


id: MONDO:0021394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the vagina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal disorder","termid":"MONDO:0001433"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of vagina","secondary_identifiers":["ICD9:623.7","MEDGEN:56378","UMLS:C0156390","icd11.foundation:1664143745","NCIT:C3664","SCTID:29609001","ICD10CM:N84.2"],"synonyms":[{"name":"polyp of the vagina","type":"exact"},{"name":"polyp, vaginal, benign","type":"exact"},{"name":"vagina polyp","type":"exact"},{"name":"vaginal polyp","type":"exact"}],"termid":"MONDO:0021394","xrefs":{"Monarch":{"xref_id":"0021394"}}}


id: GO:0106288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of deadenylation-dependent decapping of nuclear-transcribed mRNA.","definition_xrefs":["PMID:32354837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"regulates","term_name":"deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0000290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0106288"}


id: GO:0097510
data:
  {"annotated_genes":["SJAG_02528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80091],"is_not":false,"summary":null,"term":"GO:0097510"}]},"cv_name":"biological_process","definition":"A base-excision repair, AP site formation process occurring via excision of a deaminated base.","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair, AP site formation","termid":"GO:0006285"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"base-excision repair, AP site formation via deaminated base removal","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0097510","terms_by_termid":{"GO:0097510":null}}


id: MONDO:1012709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinal disorder characterized by multiple areas of retinal degeneration that occurs in dogs due to a variant in exon 10 of the BEST1 gene.","definition_xrefs":["PMID:21197113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal retinopathy 3, BEST1-related, dog","secondary_identifiers":["OMIA:001554-9615"],"synonyms":[{"name":"CMR3","type":"exact"},{"name":"multifocal retinopathy 3, dog","type":"related"}],"termid":"MONDO:1012709","xrefs":{"Monarch":{"xref_id":"1012709"}}}


id: PBO:0060249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL proto-oncogene, bHLH transcription factor","termid":"PBO:0060249"}


id: GO:0033630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion mediated by integrin","termid":"GO:0033628"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion","termid":"GO:0045785"},{"relation_name":"positively_regulates","term_name":"cell adhesion mediated by integrin","termid":"GO:0033627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion mediated by integrin","synonyms":[{"name":"positive regulation of cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033630"}


id: GO:0100015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates inositol biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100015)","termid":"GO:0100015"}


id: PBO:0078403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma locus","termid":"PBO:0078403"}


id: MONDO:0800393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the IDH3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"IDH3B-related retinopathy","termid":"MONDO:0800393","xrefs":{"Monarch":{"xref_id":"0800393"}}}


id: MONDO:0004849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subcategory of chronic obstructive pulmonary disease (COPD). It occurs in people who smoke and suffer from chronic bronchitis. It is characterized by inflation of the alveoli, alveolar wall damage, and reduction in the number of alveoli, resulting in difficulty breathing.","definition_xrefs":["NCIT:C3348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic obstructive pulmonary disease","termid":"MONDO:0005002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary emphysema","secondary_identifiers":["ICD10CM:J43","ICD9:492","EFO:0000464","MESH:D004646","MESH:D011656","DOID:9675","ICD9:492.8","SCTID:87433001","UMLS:C0034067","MEDGEN:18764"],"synonyms":[{"name":"emphysema","type":"exact"},{"name":"emphysema, pulmonary","type":"exact"}],"termid":"MONDO:0004849","xrefs":{"Monarch":{"xref_id":"0004849"}}}


id: PBO:0069976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1271, pseudogene","termid":"PBO:0069976"}


id: PBO:0030359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_hypoxia","termid":"PBO:0030359"}


id: PBO:0079410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 4","termid":"PBO:0079410"}


id: PBO:0052127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily E regulatory subunit 5","termid":"PBO:0052127"}


id: GO:0140159
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112942],"is_not":false,"summary":null,"term":"GO:0140159"}]},"cv_name":"biological_process","definition":"The directed movement of borate from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:vw","PMID:17459946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"borate transmembrane transport","termid":"GO:0035445"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"borate export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140159","terms_by_termid":{"GO:0140159":null}}


id: GO:0070500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving poly-gamma-glutamate, a polymer of D- and/or L-glutamic acid residues linked by gamma-peptidyl bonds.","definition_xrefs":["PMID:16689787","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete poly-gamma-glutamate metabolic process (obsolete GO:0070500)","synonyms":[{"name":"poly-gamma-glutamate metabolism","type":"exact"}],"termid":"GO:0070500"}


id: MONDO:0009520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3-hydroxy-3-methylglutaric aciduria (3HMG) is an organic aciduria, due to deficiency of 3-hydroxy-3-methylglutaryl-CoA-lyase (a key enzyme in ketogenesis and leucine metabolism) usually presenting in infancy with episodes of metabolic decompensation triggered by periods of fasting or infections, which when left untreated are life-threatening and may lead to neurological sequelae.","definition_xrefs":["Orphanet:20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"3-hydroxy-3-methylglutaric aciduria","secondary_identifiers":["DOID:0070541","SCTID:410059004","UMLS:C0268601","NANDO:2201119","icd11.foundation:795785192","MESH:C538324","MEDGEN:78692","NCIT:C84523","GARD:8387","OMIM:246450","NANDO:2200497"],"synonyms":[{"name":"3-OH 3-Methyl glutaric aciduria","type":"exact"},{"name":"3-hydroxy-3-methylglutaric aciduria","type":"exact"},{"name":"3-hydroxy-3-methylglutaryl-CoA lyase deficiency","type":"exact"},{"name":"HL deficiency","type":"related"},{"name":"HMG CoA lyase deficiency","type":"related"},{"name":"HMG-CoA lyase deficiency","type":"exact"},{"name":"HMG-Coa lyase deficiency","type":"related"},{"name":"HMGCLD","type":"related"},{"name":"Hmgcl deficiency","type":"related"},{"name":"Hydroxymethylglutaric aciduria","type":"exact"},{"name":"defect in leucine metabolism","type":"related"},{"name":"deficiency of hydroxymethylglutaryl-CoA lyase","type":"exact"},{"name":"hydroxymethylglutaryl-CoA lyase deficiency","type":"exact"}],"termid":"MONDO:0009520","xrefs":{"Monarch":{"xref_id":"0009520"}}}


id: GO:0018868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-aminobenzenesulfonate, aniline-o-sulfonic acid, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"2-aminobenzenesulfonate metabolic process","synonyms":[{"name":"2-aminobenzenesulfonate metabolism","type":"exact"},{"name":"2-aminobenzenesulphonate metabolic process","type":"exact"},{"name":"2-aminobenzenesulphonate metabolism","type":"exact"}],"termid":"GO:0018868"}


id: PR:O94242
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aspartate--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04267","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.06","secondary_identifiers":["UniProtKB:O94242"],"synonyms":[{"name":"AspRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DARS2","type":"exact"},{"name":"aspartyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94242"}


id: GO:0102536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-sakuranetin + O2 + reduced [NADPH--hemoprotein reductase] = (2S)-7-methylcarthamidin + H(+) + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:73431","PMID:23184958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sakuranetin 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14754"],"termid":"GO:0102536"}


id: GO:0102547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2-O-(alpha-D-glucopyranosyl)-glycerate + H2O = (R)-glycerate + D-glucose.","definition_xrefs":["RHEA:32059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"glucosylglycerate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-14901","EC:3.2.1.208"],"termid":"GO:0102547"}


id: MONDO:0005317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fatty liver (obsolete MONDO:0005317)","termid":"MONDO:0005317","xrefs":{"Monarch":{"xref_id":"0005317"}}}


id: GO:0072262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of glomerular mesangial cells in the metanephros, resulting in the expansion of the population.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"},{"relation_name":"is_a","term_name":"cell proliferation involved in metanephros development","termid":"GO:0072203"},{"relation_name":"part_of","term_name":"metanephric glomerular mesangium development","termid":"GO:0072223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}


id: PBO:0079850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-80 homolog, NALCN channel complex subunit","termid":"PBO:0079850"}


id: GO:0001727
data:
  {"annotated_genes":["SJAG_04537","SJAG_01571","SJAG_04883","SJAG_00638","SJAG_01863","SJAG_05330","SJAG_02429","SJAG_00114"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73545,78299,95088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004430"},{"annotations":[73330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016303"},{"annotations":[93706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052811"},{"annotations":[74416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000285"},{"annotations":[81464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016308"},{"annotations":[67806,99559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004143"},{"annotations":[111886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141035"},{"annotations":[75472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017050"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of a simple or complex lipid.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00638":null,"SJAG_01571":null,"SJAG_01863":null,"SJAG_02429":null,"SJAG_04537":null,"SJAG_04883":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lipid kinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9695949","Reactome:R-HSA-428273"],"termid":"GO:0001727","terms_by_termid":{"GO:0000285":null,"GO:0004143":null,"GO:0004430":null,"GO:0016303":null,"GO:0016308":null,"GO:0017050":null,"GO:0052811":null,"GO:0141035":null}}


id: GO:0075079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075079)","termid":"GO:0075079"}


id: PBO:0052470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 16","termid":"PBO:0052470"}


id: PBO:0073434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 4","termid":"PBO:0073434"}


id: GO:0050977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a chemical stimulus relating to a magnetic field, convert it to a molecular signal, and recognize and characterize the signal. It is believed that organisms such as birds and salamanders use a 'chemical compass': chemical reactions that involve transitions between different spin states can be influenced by magnetic fields and by detecting the different product ratios, these organisms can perceive the direction of the magnetic field. The mechanism by which this is detected is not certain but it may also involve light stimuli.","definition_xrefs":["GOC:ai","PMID:15886990","Wikipedia:Magnetoception"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"},{"relation_name":"is_a","term_name":"magnetoreception","termid":"GO:0050958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"magnetoreception by sensory perception of chemical stimulus","synonyms":[{"name":"magnetoreception by chemical stimulus","type":"exact"},{"name":"magnetoreception through chemical stimulus","type":"exact"},{"name":"magnetoreception, sensory perception of chemical stimulus","type":"exact"},{"name":"magnetoreception, using chemical stimulus","type":"exact"}],"termid":"GO:0050977"}


id: PR:O13821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sst4 gene.","definition_xrefs":["UniProtKB:O13821","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.05c","synonyms":[{"name":"Spom972h-sst4","type":"exact"},{"name":"suppressor of ste12 deletion protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13821"}


id: PR:Q9P7N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vas2(aps1) gene.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit sigma-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.06c","secondary_identifiers":["UniProtKB:Q9P7N2"],"synonyms":[{"name":"SPAP27G11.06c","type":"related"},{"name":"Spom972h-vas2(aps1)","type":"exact"},{"name":"aps1","type":"related"},{"name":"sigma1-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"valproic acid-sensitive protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7N2"}


id: PBO:0074775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3H","termid":"PBO:0074775"}


id: MONDO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute transudative otitis media with thin, watery and sterile effusion.","definition_xrefs":["DOID:11557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute transudative otitis media","termid":"MONDO:0002738"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute serous otitis media","secondary_identifiers":["ICD9:381.01","MEDGEN:509955","SCTID:194240006","ICD10CM:H65.0","UMLS:C0155415"],"synonyms":[{"name":"acute non-suppurative otitis media - serous","type":"exact"}],"termid":"MONDO:0001312","xrefs":{"Monarch":{"xref_id":"0001312"}}}


id: GO:0010118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of opening or closing of stomata, which is directly related to the stomatal conductance (measuring rate of passage of either water vapor or carbon dioxide (CO2) through stomata).","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal movement","termid":"GO:0010118"}


id: MONDO:0030490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 11","secondary_identifiers":["OMIM:619643","UMLS:C5562033","MEDGEN:1794243"],"synonyms":[{"name":"OOMD11","type":"exact"}],"termid":"MONDO:0030490","xrefs":{"Monarch":{"xref_id":"0030490"}}}


id: PBO:0049206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 1","termid":"PBO:0049206"}


id: PBO:0041573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 204","termid":"PBO:0041573"}


id: PATO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color between white and black colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grey","synonyms":[{"name":"plumbeous","type":"related"}],"termid":"PATO:0000950"}


id: MONDO:0030677
data:
  {"annotated_genes":["SJAG_00637"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88940],"is_not":false,"summary":null,"term":"MONDO:0030677"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"},{"relation_name":"is_a","term_name":"POLR3B-related disorder","termid":"MONDO:0700277"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, demyelinating, IIA 1I","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5676914","OMIM:619742","MEDGEN:1811493"],"synonyms":[{"name":"CMT1I","type":"exact"},{"name":"Charcot-Marie-Tooth disease neuropathy, IIA 1I","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, IIA 1I","type":"exact"}],"termid":"MONDO:0030677","terms_by_termid":{"MONDO:0030677":null},"xrefs":{"Monarch":{"xref_id":"0030677"}}}


id: PBO:0111887
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huamn GCFC2 ortholog","termid":"PBO:0111887"}


id: GO:0099582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any neurotransmitter receptor activity that is involved in regulating the concentration of calcium in the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neurotransmitter receptor activity involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"neurotransmitter receptor activity involved in regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099582"}


id: PBO:0055551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2987","termid":"PBO:0055551"}


id: MONDO:0007962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which a finger or toe is larger than normal size secondary to excessive growth of the anatomical structures or abnormal accumulation of substances.","definition_xrefs":["NCIT:C48900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megalodactyly","secondary_identifiers":["OMIM:155500","MESH:C562546","SCTID:48449000","UMLS:C0265552","MEDGEN:78564"],"synonyms":[{"name":"Megalodactyly","type":"exact"},{"name":"macrodactyly","type":"related"},{"name":"macrodactyly, somatic, (3), cerebral cavernous malformations 4, somatic","type":"exact"}],"termid":"MONDO:0007962","xrefs":{"Monarch":{"xref_id":"0007962"}}}


id: PBO:0003986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase, Arb family ABCF2-like (predicted)","termid":"PBO:0003986"}


id: GO:0060343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in an organ. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"trabecula morphogenesis","termid":"GO:0061383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trabecula formation","synonyms":[{"name":"trabecula biogenesis","type":"related"},{"name":"trabeculation","type":"exact"}],"termid":"GO:0060343"}


id: GO:0033418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"CUC codon-amino acid adaptor activity","synonyms":[{"name":"CTC codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033418"}


id: PBO:0030259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_chloramphenicol","termid":"PBO:0030259"}


id: SO:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The kink turn (K-turn) is an RNA structural motif that creates a sharp (~120 degree) bend between two continuous helices.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric_RNA_internal_loop","termid":"SO:0000021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K_turn_RNA_motif","secondary_identifiers":["http://en.wikipedia.org/wiki/K-turn"],"synonyms":[{"name":"K turn RNA motif","type":"exact"},{"name":"K-turn","type":"exact"},{"name":"kink turn","type":"exact"},{"name":"kink-turn motif","type":"exact"}],"termid":"SO:0000023"}


id: MONDO:0005997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing or stricture of the tricuspid orifice of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricuspid valve disorder","termid":"MONDO:0000471"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid valve stenosis","secondary_identifiers":["MESH:D014264","UMLS:C0040963","EFO:0007525","icd11.foundation:442626161","DOID:4078","NCIT:C50783","NANDO:2200300","SCTID:49915006","MEDGEN:21678","HP:0010446"],"synonyms":[{"name":"tricuspid stenosis","type":"exact"}],"termid":"MONDO:0005997","xrefs":{"Monarch":{"xref_id":"0005997"}}}


id: PBO:0030544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_cAMP_level","termid":"PBO:0030544"}


id: PBO:0088034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-binding protein; ER membrane protein that recruits and integrates the ubiquitin-conjugating enzyme Ubc7p into ER membrane-bound ubiquitin ligase complexes that function in the ER-associated degradation (ERAD) pathway for misfolded proteins; contains a CUE domain that binds ubiquitin to facilitate intramolecular monoubiquitination and to promote diubiquitin elongation, facilitating polyubiquitin chain formation","termid":"PBO:0088034"}


id: MONDO:0005375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the nasopharynx. Representative examples of benign neoplasms include angiofibroma and squamous papilloma. Representative examples of malignant neoplasms include keratinizing squamous cell carcinoma and nonkeratinizing carcinoma.","definition_xrefs":["NCIT:C3257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasopharyngeal disorder","termid":"MONDO:0004821"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal neoplasm","secondary_identifiers":["SCTID:126680004","EFO:0004252","MESH:D009303","MONDO:0021362","MEDGEN:6526","UMLS:C0027439"],"synonyms":[{"name":"nasopharyngeal neoplasms","type":"exact"},{"name":"nasopharyngeal tumor","type":"exact"},{"name":"nasopharyngeal tumour","type":"exact"},{"name":"nasopharynx neoplasm","type":"exact"},{"name":"nasopharynx neoplasm (disease)","type":"exact"},{"name":"nasopharynx tumor","type":"exact"},{"name":"nasopharynx tumour","type":"exact"},{"name":"neoplasm of nasopharynx","type":"exact"},{"name":"neoplasm of the nasopharynx","type":"exact"},{"name":"tumor of nasopharynx","type":"exact"},{"name":"tumor of the nasopharynx","type":"exact"},{"name":"tumour of nasopharynx","type":"exact"},{"name":"tumour of the nasopharynx","type":"exact"}],"termid":"MONDO:0005375","xrefs":{"Monarch":{"xref_id":"0005375"}}}


id: GO:0061176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon of a glutamatergic neuron, containing the specialized apparatus necessary for the tonic release neurotransmitters that will induce the contraction of muscle. Type Ib terminal boutons are larger than type Is terminal boutons.","definition_xrefs":["GOC:dph","GOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I terminal bouton","termid":"GO:0061174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type Ib terminal bouton","synonyms":[{"name":"type Ib terminal button","type":"exact"}],"termid":"GO:0061176"}


id: MONDO:0700198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphoma that occurs in a pig.","definition_xrefs":["NCIT:C134786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porcine lymphoma","termid":"MONDO:0700198","xrefs":{"Monarch":{"xref_id":"0700198"}}}


id: GO:0051435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH4 protein domain, present in Bcl-2 family members. All anti-apoptotic proteins contain BH1 and BH2 domains; some also contain an additional N-terminal BH4 domain, which is almost never seen in pro-apoptotic proteins. Loss of the BH4 domain can diminish or abrogate anti-apoptotic function or even impart outright death-promoting properties to the protein.","definition_xrefs":["PMID:9020082","PMID:9704409","Prosite:PS50063","InterPro:IPR003093","Prosite:PS01260","PMID:12133724","PMID:11048732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"BH4 domain binding","termid":"GO:0051435"}


id: MONDO:0026182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic cranial malformation (obsolete MONDO:0026182)","secondary_identifiers":["Orphanet:183542"],"termid":"MONDO:0026182","xrefs":{"Monarch":{"xref_id":"0026182"}}}


id: MONDO:0011905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial hypercholanemia (obsolete MONDO:0011905)","termid":"MONDO:0011905","xrefs":{"Monarch":{"xref_id":"0011905"}}}


id: PBO:0070981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 5","termid":"PBO:0070981"}


id: GO:1901791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["UniPathway:UPA00836","GOC:TermGenie","GOC:yaf","MetaCyc:HCAMHPDEG-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","termid":"GO:1901790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate catabolic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate breakdown","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate catabolism","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate degradation","type":"exact"}],"termid":"GO:1901791"}


id: PBO:0063044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PALLD antisense RNA 1","termid":"PBO:0063044"}


id: MONDO:0009388
data:
  {"annotated_genes":["SJAG_01061","SJAG_02388"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87282,87283],"is_not":false,"summary":null,"term":"MONDO:0009388"}]},"cv_name":"mondo","definition":"Hyperlysinaemia is a lysine metabolism disorder characterized by elevated levels of lysine in the cerebrospinal fluid and blood. Variable degrees of saccharopinuria are also present.","definition_xrefs":["Orphanet:2203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysine and hydroxylysine metabolism","termid":"MONDO:0017351"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01061":null,"SJAG_02388":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hyperlysinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:270.7","NCIT:C123433","GARD:2828","HP:0002161","DOID:9274","MEDGEN:82816","UMLS:C0268553","OMIM:238700","SCTID:58558003"],"synonyms":[{"name":"Alpha-aminoadipic semialdehyde synthase deficiency","type":"related"},{"name":"L-lysine NAD-oxido-reductase deficiency","type":"related"},{"name":"L-lysine:NAD-oxido-reductase deficiency","type":"related"},{"name":"hyperlysinemia","type":"exact"},{"name":"hyperlysinemia (disease)","type":"exact"},{"name":"hyperlysinemia type I","type":"exact"},{"name":"hyperlysinemia, type 1","type":"related"},{"name":"hyperlysinemia, type I","type":"related"},{"name":"lysine alpha-ketoglutarate reductase deficiency","type":"exact"},{"name":"lysine intolerance","type":"related"},{"name":"lysine:Alpha-ketoglutarate reductase deficiency","type":"related"}],"termid":"MONDO:0009388","terms_by_termid":{"MONDO:0009388":null},"xrefs":{"Monarch":{"xref_id":"0009388"}}}


id: PBO:0073621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 7","termid":"PBO:0073621"}


id: GO:0015469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A toxin that exerts its effects by forming a channel in a membrane that allows the unregulated passage of substances into and out of the cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete channel-forming toxin activity (obsolete GO:0015469)","synonyms":[{"name":"channel-forming toxin activity","type":"exact"}],"termid":"GO:0015469"}


id: GO:0016706
data:
  {"annotated_genes":["SJAG_00221","SJAG_00892","SJAG_05265","SJAG_04580","SJAG_03664","SJAG_03997","SJAG_03041","SJAG_00642","SJAG_02401","SJAG_03635","SJAG_03286"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76419,79389],"is_not":false,"summary":null,"term":"GO:0016706"},{"annotations":[72183,89216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[68277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[71880,76730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[95950,61241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[96687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106156"},{"annotations":[75798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031543"},{"annotations":[105021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_00892":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null,"SJAG_04580":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-oxoglutarate-dependent dioxygenase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["EC:1.14.11.-","Reactome:R-HSA-1234164","GO:0010302","Reactome:R-HSA-6783455"],"synonyms":[{"name":"2-oxoglutarate dioxygenase activity","type":"exact"},{"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors","type":"exact"}],"termid":"GO:0016706","terms_by_termid":{"GO:0016706":null,"GO:0031543":null,"GO:0034647":null,"GO:0051864":null,"GO:0106156":null,"GO:0140680":null,"GO:0140683":null,"GO:1990984":null}}


id: MONDO:0013285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any common variable immunodeficiency in which the cause of the disease is a mutation in the MS4A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, common variable, 5","secondary_identifiers":["MEDGEN:462090","OMIM:613495","GARD:15670","UMLS:C3150740","DOID:0081148"],"synonyms":[{"name":"CVID5","type":"related"},{"name":"MS4A1 common variable immunodeficiency","type":"exact"},{"name":"antibody deficiency due to CD20 defect","type":"related"},{"name":"common variable immunodeficiency caused by mutation in MS4A1","type":"exact"},{"name":"immunodeficiency, common variable, 5","type":"exact"},{"name":"immunodeficiency, common variable, type 5","type":"exact"}],"termid":"MONDO:0013285","xrefs":{"Monarch":{"xref_id":"0013285"}}}


id: PBO:0034655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_centromere_during_vegetative_growth","termid":"PBO:0034655"}


id: GO:1990179
data:
  {"annotated_genes":["SJAG_00279","SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120673,94187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the actomyosin contractile ring.","definition_xrefs":["GOC:mah","PMID:23349808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actomyosin contractile ring","type":"exact"}],"termid":"GO:1990179","terms_by_termid":{"GO:1904498":null}}


id: MOD:01175
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phycourobilin.","definition_xrefs":["RESID:AA0427","PubMed:1903388","PubMed:3208761","PubMed:3838747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-phycourobilin-L-cysteine","synonyms":[{"name":"(2S,3R,16R)-18-ethenyl-3-[(1R)-1-([(R)-2-amino-2-carboxyethyl]sulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-2,7,13,17-tetramethyl-4,5,15,16-tetrahydrobiline-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"18-ethenyl-3-[1-(2-amino-2-carboxyethylsulfanyl)ethyl]-2,3,15,16-dihydro-2,7,13,17-tetramethyl-1,19-dioxo-(21H,22H,24H)-bilin-8,12-dipropanoic acid","type":"exact"},{"name":"BINDING Phycourobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"PUB","type":"exact"},{"name":"PUBCys","type":"exact"},{"name":"S-phycourobilin-L-cysteine","type":"exact"},{"name":"phycourobilin cysteine adduct","type":"exact"}],"termid":"MOD:01175"}


id: PBO:0051971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts with SUPT6H, CTD assembly factor 1","termid":"PBO:0051971"}


id: PBO:0042426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 10","termid":"PBO:0042426"}


id: PBO:0052592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 2 pseudogene 1","termid":"PBO:0052592"}


id: GO:0141161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cAMP/PKA signal transduction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"cAMP/PKA signal transduction","termid":"GO:0141156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cAMP/PKA signal transduction","synonyms":[{"name":"regulation of cAMP/PKA signaling","type":"exact"}],"termid":"GO:0141161"}


id: MONDO:1010058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exocrine pancreatic insufficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocrine pancreatic insufficiency, non-human animal","secondary_identifiers":["OMIA:000765"],"termid":"MONDO:1010058","xrefs":{"Monarch":{"xref_id":"1010058"}}}


id: GO:2001021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of response to DNA damage stimulus.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of response to DNA damage stimulus (obsolete GO:2001021)","synonyms":[{"name":"negative regulation of DNA damage response","type":"exact"},{"name":"negative regulation of cellular DNA damage response","type":"exact"},{"name":"negative regulation of cellular response to DNA damage stimulus","type":"exact"},{"name":"negative regulation of response to genotoxic stress","type":"exact"}],"termid":"GO:2001021"}


id: GO:0075174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP-mediated signaling in response to host (obsolete GO:0075174)","synonyms":[{"name":"regulation of cAMP-mediated signal transduction in response to host","type":"exact"},{"name":"regulation of cAMP-mediated signalling in response to host","type":"exact"},{"name":"regulation of symbiont cAMP-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075174"}


id: MONDO:1010752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrichosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis, non-human animal","termid":"MONDO:1010130"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrichosis, dog","secondary_identifiers":["OMIA:000513-9615"],"termid":"MONDO:1010752","xrefs":{"Monarch":{"xref_id":"1010752"}}}


id: GO:0150076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The immediate defensive reaction by neural vertebrate tissue to infection or injury caused by chemical or physical agents.","definition_xrefs":["PMID:18164423","GOC:bc","PMID:11099416","GOC:aruk","PMID:10981966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroinflammatory response","synonyms":[{"name":"nerve tissue inflammatory response","type":"exact"},{"name":"nervous tissue inflammatory response","type":"exact"},{"name":"neural tissue inflammatory response","type":"exact"}],"termid":"GO:0150076"}


id: PR:P49740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleoside diphosphate kinase A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside diphosphate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.07","secondary_identifiers":["UniProtKB:P49740"],"synonyms":[{"name":"NDK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NDP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC806.07","type":"related"},{"name":"Spom972h-NME1","type":"exact"}],"termid":"PR:P49740"}


id: FYPO:0000165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of conjugation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of mating","synonyms":[{"name":"abnormal regulation of conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0000165"}


id: PBO:0055416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2846","termid":"PBO:0055416"}


id: PBO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease II Exo2","termid":"PBO:0001175"}


id: GO:0100067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway process that positively_regulates spinal cord association neuron differentiation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of spinal cord association neuron differentiation by canonical Wnt signaling pathway (obsolete GO:0100067)","termid":"GO:0100067"}


id: PBO:0031120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_spontaneous_diploidization","termid":"PBO:0031120"}


id: PBO:0056347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 5","termid":"PBO:0056347"}


id: PBO:0059864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 1","termid":"PBO:0059864"}


id: PBO:0053469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 433","termid":"PBO:0053469"}


id: PBO:0082827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved protein involved in autophagy; interacts with Atg12p-Atg5p conjugates to form Atg12p-Atg5p-Atg16p multimers, which binds to membranes and localizes to the pre-autophagosomal structure and are required for autophagy; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0082827"}


id: GO:0030374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transcription coactivator activity that activates or increases the transcription of specific gene sets via binding to a DNA-bound nuclear receptor, either on its own or as part of a complex. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators. A fourth class of coactivator activity is the bridging of a DNA-binding transcription factor to the general (basal) transcription machinery. The Mediator complex, which bridges sequence-specific DNA binding transcription factors and RNA polymerase, is also a transcription coactivator.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear receptor coactivator activity (obsolete GO:0030374)","synonyms":[{"name":"ligand-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"},{"name":"ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"},{"name":"nuclear receptor transcription coactivator activity","type":"exact"},{"name":"transcription factor activity, ligand-activated RNA polymerase II transcription factor binding","type":"exact"}],"termid":"GO:0030374"}


id: PBO:0073366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family I member 1","termid":"PBO:0073366"}


id: PR:O42859
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 28S ribosomal protein S14, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.07c","secondary_identifiers":["UniProtKB:O42859"],"synonyms":[{"name":"Spom972h-MRPS14","type":"exact"}],"termid":"PR:O42859"}


id: GO:0042369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["GOC:mah","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"},{"relation_name":"is_a","term_name":"fat-soluble vitamin catabolic process","termid":"GO:0042363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629","GO:0006766"],"is_obsolete":false,"name":"vitamin D catabolic process","synonyms":[{"name":"calciferol catabolic process","type":"narrow"},{"name":"calciferol catabolism","type":"narrow"},{"name":"cholecalciferol biosynthesis","type":"narrow"},{"name":"cholecalciferol biosynthetic process","type":"narrow"},{"name":"ergocalciferol biosynthesis","type":"narrow"},{"name":"ergocalciferol biosynthetic process","type":"narrow"},{"name":"vitamin D breakdown","type":"exact"},{"name":"vitamin D catabolism","type":"exact"},{"name":"vitamin D degradation","type":"exact"}],"termid":"GO:0042369"}


id: PBO:0079723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTD2 pseudogene 1","termid":"PBO:0079723"}


id: MONDO:0021057
data:
  {"annotated_genes":["SJAG_03724","SJAG_02261","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012041"},{"annotations":[87071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014630"},{"annotations":[88958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044300"}]},"cv_name":"mondo","definition":"An inherited diseases haracterized by the development of adenomas in the rectum and colon; classified into classic FAP and attenuated FAP.","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"is_obsolete":false,"name":"classic or attenuated familial adenomatous polyposis","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"classic or attenuated FAP","type":"exact"},{"name":"classic or attenuated familial adenomatous polyposis","type":"exact"}],"termid":"MONDO:0021057","terms_by_termid":{"MONDO:0012041":null,"MONDO:0014630":null,"MONDO:0044300":null},"xrefs":{"Monarch":{"xref_id":"0021057"}}}


id: PBO:0043495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 4","termid":"PBO:0043495"}


id: PBO:0083739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the conserved oligomeric Golgi complex; a cytosolic tethering complex (Cog1p through Cog8p) that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments","termid":"PBO:0083739"}


id: PBO:0080868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YJU2 splicing factor homolog","termid":"PBO:0080868"}


id: FYPO:0003733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alcohol dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal alcohol dehydrogenase activity","synonyms":[{"name":"alcohol dehydrogenase (NAD) activity","type":"exact"}],"termid":"FYPO:0003733"}


id: FYPO:0000629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which programmed cell death by apoptosis is abnormal. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["PomBase:mah","GO:0006915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal apoptotic process","synonyms":[{"name":"abnormal apoptosis","type":"narrow"}],"termid":"FYPO:0000629"}


id: GO:0080132
data:
  {"annotated_genes":["SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74122],"is_not":false,"summary":null,"term":"GO:0080132"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of the C-2 position in a fatty acid. The 2-hydroxylation may occur on free fatty acids or within the fatty acyl chain of a sphingolipid.","definition_xrefs":["PMID:36902339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fatty acid 2-hydroxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5693761"],"synonyms":[{"name":"fatty acid alpha-hydroxylase activity","type":"exact"}],"termid":"GO:0080132","terms_by_termid":{"GO:0080132":null}}


id: PBO:0077891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK binding protein","termid":"PBO:0077891"}


id: PBO:0030973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation","termid":"PBO:0030973"}


id: PBO:0055562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2998","termid":"PBO:0055562"}


id: PBO:0004550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Rsv2","termid":"PBO:0004550"}


id: PBO:0028134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snoRNA_primary_transcript_level","termid":"PBO:0028134"}


id: MONDO:0859285
data:
  {"annotated_genes":["SJAG_02750"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87559],"is_not":false,"summary":null,"term":"MONDO:0859285"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, short stature, and speech delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823984","UMLS:C5774211","OMIM:620027"],"termid":"MONDO:0859285","terms_by_termid":{"MONDO:0859285":null},"xrefs":{"Monarch":{"xref_id":"0859285"}}}


id: MONDO:0018939
data:
  {"annotated_genes":["SJAG_03188","SJAG_01491","SJAG_04316","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87687,87688,87686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[87774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[88493,88494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"}]},"cv_name":"mondo","definition":"A rare, congenital muscular dystrophy due to dystroglycanopathy characterized by early onset muscular dystrophy, severe muscular hypotonia, severe mental retardation and typical brain and eye malformations, including pachygyria, polymicrogyria, agyria, brainstem and cerebellar structural anomalies, severe myopia, glaucoma, optic nerve and retinal hypoplasia. Patients may present with seizures, macrocephaly or microcephaly, microphthalmia, and congenital contractures. Depending on the severity, limited motor function is acquired. Less severe cases have been reported.","definition_xrefs":["Orphanet:588"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of protein O-mannosyltransferase 2","termid":"MONDO:0016185"},{"relation_name":"excluded_subClassOf","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"},{"relation_name":"excluded_subClassOf","term_name":"cobblestone lissencephaly","termid":"MONDO:0018869"},{"relation_name":"excluded_subClassOf","term_name":"myopathy caused by variation in FKRP","termid":"MONDO:0700066"},{"relation_name":"excluded_subClassOf","term_name":"myopathy caused by variation in POMGNT1","termid":"MONDO:0700068"},{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscle-eye-brain disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:156","UMLS:C0457133","SCTID:277950001","ICD9:742.4","MEDGEN:105341"],"synonyms":[{"name":"MEB","type":"related"},{"name":"MEB syndrome","type":"exact"},{"name":"Santavuori congenital muscular dystrophy","type":"exact"},{"name":"muscle eye brain disease","type":"related"},{"name":"muscle-eye-brain syndrome","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy congenital with brain and eye anomalies A3","type":"narrow"}],"termid":"MONDO:0018939","terms_by_termid":{"MONDO:0009364":null,"MONDO:0013154":null,"MONDO:0014140":null},"xrefs":{"Monarch":{"xref_id":"0018939"}}}


id: GO:0005698
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The region of a eukaryotic chromosome that is attached to the spindle during nuclear division. It is defined genetically as the region of the chromosome that always segregates at the first division of meiosis; the region of the chromosome in which no crossing over occurs. At the start of M phase, each chromosome consists of two sister chromatids with a constriction at a point which forms the centromere. During late prophase two kinetochores assemble on each centromere, one kinetochore on each sister chromatid.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete centromere (obsolete GO:0005698)","synonyms":[{"name":"centromere","type":"exact"}],"termid":"GO:0005698"}


id: MONDO:0032586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrhea 10, protein-losing enteropathy type","secondary_identifiers":["MEDGEN:1648311","UMLS:C4748579","OMIM:618183"],"synonyms":[{"name":"DIAR10","type":"related"},{"name":"DIARRHEA 10, PROTEIN-LOSING ENTEROPATHY TYPE","type":"related"}],"termid":"MONDO:0032586","xrefs":{"Monarch":{"xref_id":"0032586"}}}


id: GO:0019632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving shikimate, (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate, the anion of shikimic acid. It is an important intermediate in the biosynthesis of aromatic amino acids.","definition_xrefs":["ISBN:0198547684","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"shikimate metabolic process","synonyms":[{"name":"shikimate metabolism","type":"exact"}],"termid":"GO:0019632"}


id: PBO:0027714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_small_cell","termid":"PBO:0027714"}


id: PBO:0114343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator for ribosomal proteins via TOR signaling pathway Crf1/Ifh1","termid":"PBO:0114343"}


id: GO:0071730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the beak. This process pertains to the initial formation of a structure from unspecified parts. The avian beak is an external anatomical structure, in the head region, that is adapted for feeding self and young, catching prey, probing, etc. It encompasses, but is not restricted to, the maxilla, mandible, maxillary rhamphotheca, mandibular rhamphotheca, nostril, nasal fossa, nasal bones, egg tooth and rictus.","definition_xrefs":["ISBN:0702008729","GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"beak morphogenesis","termid":"GO:0071729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beak formation","termid":"GO:0071730"}


id: PBO:0045766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECI1 antisense RNA 1","termid":"PBO:0045766"}


id: GO:0046900
data:
  {"annotated_genes":["SJAG_03224","SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70013,73989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrofolylpolyglutamate, a folate derivative comprising tetrahydrofolate attached to a chain of glutamate residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_03224":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolylpolyglutamate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"tetrahydrofolyl-[Glu](n) metabolic process","type":"exact"},{"name":"tetrahydrofolyl-[Glu](n) metabolism","type":"exact"},{"name":"tetrahydrofolylpolyglutamate metabolism","type":"exact"}],"termid":"GO:0046900","terms_by_termid":{"GO:0046901":null}}


id: PBO:0077593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 4","termid":"PBO:0077593"}


id: GO:0072657
data:
  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id: PBO:0069515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 784, pseudogene","termid":"PBO:0069515"}


id: PBO:0111426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo6","termid":"PBO:0111426"}


id: PBO:0000045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase publication types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"null","termid":"PBO:0000045"}


id: PBO:0087474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both RNase MRP and nuclear RNase P; RNase MRP cleaves pre-rRNA, while nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; binds to the RPR1 RNA subunit in RNase P","termid":"PBO:0087474"}


id: PBO:0046070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 1","termid":"PBO:0046070"}


id: GO:1901026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of ripoptosome components leading to a necroptotic process.","definition_xrefs":["PMID:22274400","GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ripoptosome assembly","termid":"GO:0097343"},{"relation_name":"part_of","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"ripoptosome assembly involved in necroptotic process","synonyms":[{"name":"ripoptosome assembly involved in necroptosis","type":"narrow"}],"termid":"GO:1901026"}


id: PBO:0086347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PtdIns-3-P binding protein that tethers the ER to vacuoles at NVJs; anchored in the ER membrane at nucleus-vacuole junctions and binds phosphatidylinositol 3-phosphate (PtdIns-3-P) in the vacuolar membrane via its Phox homology (PX) domain; expressed predominantly in late G1 to early S phase of the cell cycle; mutation affects nuclear and mitochondrial transmission to daughter buds; similar to 4 human genes, one of which (SNX14) is associated with neurological disease","termid":"PBO:0086347"}


id: GO:0052195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement on or near other organism involved in symbiotic interaction (obsolete GO:0052195)","synonyms":[{"name":"movement on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052195"}


id: PBO:0060072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 19","termid":"PBO:0060072"}


id: MONDO:1012895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited macrothrombocytopenia that occurs in dogs due to a mutation in the TUBB1 gene.","definition_xrefs":["PMID:18466252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia, dog","termid":"MONDO:1010659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, TUBB1-related, dog","secondary_identifiers":["OMIA:002434-9615"],"termid":"MONDO:1012895","xrefs":{"Monarch":{"xref_id":"1012895"}}}


id: GO:1990186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of lymphatic vessels.","definition_xrefs":["PMID:23897233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"is_a","term_name":"lymphatic vascular process in circulatory system","termid":"GO:1990183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphatic vessel size","synonyms":[{"name":"regulation of collecting lymphatic vessel size","type":"narrow"}],"termid":"GO:1990186"}


id: PBO:0049126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member C","termid":"PBO:0049126"}


id: MONDO:0015631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2N von Willebrand disease (type 2N VWD) is a subtype of type 2 VWD characterized by a bleeding disorder associated with a marked decrease in the affinity of the Willebrand factor (von Willebrand factor; VWF) for factor VIII (FVIII).","definition_xrefs":["Orphanet:166093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"von Willebrand disease 2","termid":"MONDO:0013304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease type 2N","secondary_identifiers":["icd11.foundation:1091176565","MEDGEN:266187","NCIT:C131689","SCTID:359732009","UMLS:C1282975","GARD:17024"],"synonyms":[{"name":"von Willebrand disease Normandy variant","type":"exact"},{"name":"von Willebrand disease, type 2N","type":"exact"}],"termid":"MONDO:0015631","xrefs":{"Monarch":{"xref_id":"0015631"}}}


id: GO:0016622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.2.2.-"],"termid":"GO:0016622"}


id: MONDO:0011663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile primary lateral sclerosis (JPLS) is a very rare motor neuron disease characterized by progressive upper motor neuron dysfunction leading to loss of the ability to walk with wheelchair dependence, and subsequently, loss of motor speech production.","definition_xrefs":["Orphanet:247604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sclerosis","termid":"MONDO:0018155"},{"relation_name":"is_a","term_name":"ALS2-related motor neuron disease","termid":"MONDO:0100227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"juvenile primary lateral sclerosis","secondary_identifiers":["UMLS:C1853396","GARD:4485","MEDGEN:342870","MESH:C536416","SCTID:717964007","OMIM:606353"],"synonyms":[{"name":"JPLS","type":"exact"},{"name":"PLS juvenile","type":"related"},{"name":"PLSJ","type":"related"},{"name":"Pls, juvenile","type":"related"},{"name":"juvenile PLS","type":"exact"},{"name":"primary lateral sclerosis, juvenile","type":"related"}],"termid":"MONDO:0011663","xrefs":{"Monarch":{"xref_id":"0011663"}}}


id: MONDO:0012355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder caused by mutations in the TRIOBP gene, encoding TRIO and F-actin-binding protein. The condition is characterized by severe to profound sensorineural hearing loss.","definition_xrefs":["NCIT:C129023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 28","secondary_identifiers":["GARD:22617","MESH:C565218","OMIM:609823","UMLS:C1853276","MEDGEN:342839","DOID:0110486"],"synonyms":[{"name":"DFNB28","type":"narrow"},{"name":"TRIOBP autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 28","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 28","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in TRIOBP","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 28","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 28","type":"exact"},{"name":"deafness, autosomal recessive 28","type":"narrow"},{"name":"deafness, autosomal recessive type 28","type":"narrow"}],"termid":"MONDO:0012355","xrefs":{"Monarch":{"xref_id":"0012355"}}}


id: PBO:0072091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 22","termid":"PBO:0072091"}


id: PBO:0119640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR checkpoint kinase","termid":"PBO:0119640"}


id: GO:0044539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a long-chain fatty acid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:22022213","GOC:jl","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transport","termid":"GO:0015909"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"is_a","term_name":"lipid import into cell","termid":"GO:0140354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"long-chain fatty acid import into cell","synonyms":[{"name":"long-chain fatty acid import","type":"related"},{"name":"long-chain fatty acid uptake","type":"exact"}],"termid":"GO:0044539"}


id: MONDO:0016920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial deletion of the long arm of chromosome 22 (obsolete MONDO:0016920)","termid":"MONDO:0016920","xrefs":{"Monarch":{"xref_id":"0016920"}}}


id: PBO:0078940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 7-1","termid":"PBO:0078940"}


id: MONDO:0975745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with characteristic facial and ectodermal features and tetraparesis 1","secondary_identifiers":["OMIM:620888"],"termid":"MONDO:0975745","xrefs":{"Monarch":{"xref_id":"0975745"}}}


id: PBO:0002905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin/tropomyosin family, drebrin ortholog Abp1","termid":"PBO:0002905"}


id: MONDO:0015761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 10p is a syndrome of mental retardation/multiple congenital malformations (MR-MCA) that is caused by the total or partial duplication of the short arm of chromosome 10.","definition_xrefs":["Orphanet:171929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 10","termid":"MONDO:0016947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 10p","secondary_identifiers":["UMLS:C4082793","GARD:5299","MESH:C538290","MEDGEN:904688","SCTID:717157006"],"synonyms":[{"name":"10p duplication","type":"related"},{"name":"10p trisomy","type":"related"},{"name":"Duplication 10p","type":"related"},{"name":"chromosome 10p duplication","type":"related"},{"name":"partial trisomy 10p","type":"related"},{"name":"trisomy type 10p","type":"exact"}],"termid":"MONDO:0015761","xrefs":{"Monarch":{"xref_id":"0015761"}}}


id: GO:0031960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosteroid hormone stimulus. A corticosteroid is a steroid hormone that is produced in the adrenal cortex. Corticosteroids are involved in a wide range of physiologic systems such as stress response, immune response and regulation of inflammation, carbohydrate metabolism, protein catabolism, blood electrolyte levels, and behavior. They include glucocorticoids and mineralocorticoids.","definition_xrefs":["GOC:mah","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to steroid hormone","termid":"GO:0048545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticosteroid","synonyms":[{"name":"response to corticosteroid stimulus","type":"exact"}],"termid":"GO:0031960"}


id: PBO:0074140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A5","termid":"PBO:0074140"}


id: GO:0003913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA.","definition_xrefs":["GOC:mah","PMID:11124949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"DNA photolyase activity","termid":"GO:0003913"}


id: MONDO:1011467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, dog","secondary_identifiers":["OMIA:000037-9615"],"termid":"MONDO:1011467","xrefs":{"Monarch":{"xref_id":"1011467"}}}


id: GO:0035443
data:
  {"annotated_genes":["SJAG_03577","SJAG_01344","SJAG_01983","SJAG_03497","SJAG_05213","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[115122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[97955,120224,98944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[104934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The directed movement of a tripeptide across a membrane by means of some agent such as a transporter or pore. A tripeptide is a compound containing three amino acids linked together by peptide bonds.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"tripeptide transport","termid":"GO:0042939"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"tripeptide transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tripeptide membrane transport","type":"exact"}],"termid":"GO:0035443","terms_by_termid":{"GO:0071996":null,"GO:0098709":null,"GO:0140207":null,"GO:0160007":null}}


id: GO:0047462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + ATP + H2O = D-phenylalanine + AMP + diphosphate + 2 H+.","definition_xrefs":["RHEA:20201","EC:5.1.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylalanine racemase (ATP-hydrolyzing) activity","secondary_identifiers":["MetaCyc:5.1.1.11-RXN","KEGG_REACTION:R00686"],"synonyms":[{"name":"gramicidin S synthetase I","type":"related"},{"name":"phenylalanine racemase (ATP-hydrolysing)","type":"broad"},{"name":"phenylalanine racemase (adenosine triphosphate-hydrolysing)","type":"related"},{"name":"phenylalanine racemase activity","type":"related"}],"termid":"GO:0047462"}


id: MONDO:0004840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cystic kidney disease","termid":"MONDO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"non-congenital cyst of kidney","secondary_identifiers":["MEDGEN:541491","UMLS:C0268799","DOID:9621","SCTID:105999006","ICD9:593.2"],"termid":"MONDO:0004840","xrefs":{"Monarch":{"xref_id":"0004840"}}}


id: GO:0103015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (Kdo)2-lipid A + 2 4-amino-4-deoxy-alpha-L-arabinopyranosyl di-trans,poly-cis-undecaprenyl phosphate = (beta-L-Ara4N)2-(KDO)2-lipid A + 2 ditrans,polycis-undecaprenyl phosphate.","definition_xrefs":["GOC:pz","EC:2.4.2.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"4-amino-4-deoxy-L-arabinose transferase activity","secondary_identifiers":["MetaCyc:RXN0-2001","RHEA:35371"],"termid":"GO:0103015"}


id: GO:0019574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose, which proceeds via the conversion of sucrose to 3'-ketosucrose. 3'-ketosucrose is hydrolyzed to 3-ketoglucose and fructose, and the 3-ketoglucose is then be converted to glucose.","definition_xrefs":["MetaCyc:SUCROSEUTIL2-PWY","GOC:bf","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"},{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"sucrose catabolic process via 3'-ketosucrose","synonyms":[{"name":"sucrose breakdown, using glucoside 3-dehydrogenase","type":"exact"},{"name":"sucrose catabolic process to D-glucose","type":"exact"},{"name":"sucrose catabolic process, using glucoside 3-dehydrogenase","type":"exact"},{"name":"sucrose catabolism, using glucoside 3-dehydrogenase","type":"exact"},{"name":"sucrose degradation, using glucoside 3-dehydrogenase","type":"exact"}],"termid":"GO:0019574"}


id: GO:0060312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of blood vessel remodeling, the reorganization or renovation of existing blood vessels.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"blood vessel remodeling","termid":"GO:0001974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood vessel remodeling","synonyms":[{"name":"regulation of blood vessel remodelling","type":"exact"}],"termid":"GO:0060312"}


id: GO:1901440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(hydroxyalkanoate).","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) metabolic process","synonyms":[{"name":"poly(hydroxyalkanoate) metabolism","type":"exact"}],"termid":"GO:1901440"}


id: SO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000144 primary_transcript_attribute (obsolete SO:0000144)","termid":"SO:0000144"}


id: PBO:0048596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone inducible transmembrane protein","termid":"PBO:0048596"}


id: PBO:0028357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphatase_activity","termid":"PBO:0028357"}


id: PBO:0062612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily U member 1 pseudogene","termid":"PBO:0062612"}


id: FYPO:0000805
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121221],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0006433"},{"annotations":[121491,121505,121493,121490,121502],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endoplasmic reticulum (ER) organization is abnormal. ER organization results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum.","definition_xrefs":["GO:0007029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal endoplasmic reticulum organization","references_by_uniquename":{"PMID:25318672":null,"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940","SJAG_00426","SJAG_01906","SJAG_02763"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","ned1delta","nem1delta"],"synonyms":[{"name":"abnormal ER organization","type":"exact"},{"name":"abnormal endoplasmic reticulum organisation","type":"exact"},{"name":"abnormal endoplasmic reticulum organization during mitotic cell cycle","type":"related"},{"name":"abnormal endoplasmic reticulum organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000805","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001784":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null}}


id: GO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The heat generation process that results in a rise in body temperature above the normal, often as a response to infection.","definition_xrefs":["GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute-phase response","termid":"GO:0006953"},{"relation_name":"is_a","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fever generation","secondary_identifiers":["Wikipedia:Fever"],"synonyms":[{"name":"pyrexia","type":"broad"}],"termid":"GO:0001660"}


id: MONDO:0004228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypogonadotropism (obsolete MONDO:0004228)","termid":"MONDO:0004228","xrefs":{"Monarch":{"xref_id":"0004228"}}}


id: PBO:0049035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 22","termid":"PBO:0049035"}


id: GO:0110091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in hippocampal neurons.","definition_xrefs":["GOC:sl","PMID:18940801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"regulation of hippocampal neuron apoptotic process","termid":"GO:0110089"},{"relation_name":"negatively_regulates","term_name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hippocampal neuron apoptotic process","termid":"GO:0110091"}


id: GO:0070466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha2-beta1 integrin complex bound to a type VI collagen triple helix containing an alpha3(VI) chain.","definition_xrefs":["PMID:8387021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha2-beta1 integrin-alpha3(VI) complex","synonyms":[{"name":"ITGA2-ITGB1-COL6A3 complex","type":"narrow"}],"termid":"GO:0070466"}


id: GO:1990440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an endoplasmic reticulum stress.","definition_xrefs":["GOC:PARL","PMID:21113145","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress (obsolete GO:1990440)","synonyms":[{"name":"ER stress-induced upregulation of transcription","type":"broad"},{"name":"activation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of transcription induced by ER stress","type":"broad"},{"name":"upregulation of Pol II transcription induced by ER stress","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1990440"}


id: PR:Q9HDZ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC589.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDZ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C589.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.06c","synonyms":[{"name":"Spom972h-SPAC589.06c","type":"exact"}],"termid":"PR:Q9HDZ8"}


id: GO:0008701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-2-oxopentanoate = acetaldehyde + pyruvate.","definition_xrefs":["RHEA:22624","EC:4.1.3.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-2-oxovalerate aldolase activity","secondary_identifiers":["KEGG_REACTION:R00750","MetaCyc:MHPELY-RXN","GO:0018804","UM-BBD_enzymeID:r0100"],"synonyms":[{"name":"4-hydroxy-2-ketovalerate aldolase activity","type":"related"},{"name":"4-hydroxy-2-oxopentanoate pyruvate-lyase (acetaldehyde-forming) activity","type":"related"},{"name":"4-hydroxy-2-oxopentanoate pyruvate-lyase activity","type":"related"},{"name":"4-hydroxy-2-oxovalerate pyruvate-lyase activity","type":"related"},{"name":"DmpG","type":"related"},{"name":"HOA","type":"related"}],"termid":"GO:0008701"}


id: PBO:0074428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 28","termid":"PBO:0074428"}


id: MONDO:1010749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in sheep in which the cause of the disease is a mutation in the ADAMTS2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, sheep","termid":"MONDO:1011497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, dermatosparaxis type, ADAMTS2-related, sheep","secondary_identifiers":["OMIA:000328-9940"],"synonyms":[{"name":"dEDS","type":"exact"}],"termid":"MONDO:1010749","xrefs":{"Monarch":{"xref_id":"1010749"}}}


id: PBO:0039566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 62","termid":"PBO:0039566"}


id: GO:0160055
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of at least GAP45 (gliding-associated protein), GAP50 and myosin heavy and light chains. Anchored via GAP50 to the inner membrane complex of motile and invasive forms of apicomplexan parasites and regulates parasite gliding motility and invasion of host cells.","definition_xrefs":["PMID:19577950","PMID:15123738","PMID:12139608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glideosome","termid":"GO:0160055"}


id: GO:1901968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of polynucleotide 3'-phosphatase activity.","definition_xrefs":["PMID:23316050","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of polynucleotide 3'-phosphatase activity (obsolete GO:1901968)","synonyms":[{"name":"regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"}],"termid":"GO:1901968"}


id: MONDO:0013245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"excluded_subClassOf","term_name":"obsolete intractable diarrhea of infancy (obsolete MONDO:0019126)","termid":"MONDO:0019126"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune enteropathy","termid":"MONDO:0019787"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic multisystem autoimmune disease due to ITCH deficiency","secondary_identifiers":["UMLS:C3150649","Orphanet:228426","NANDO:2200739","OMIM:613385","GARD:10775","icd11.foundation:1970749000","MEDGEN:461999"],"synonyms":[{"name":"ADMFD","type":"related"},{"name":"ITCH E3 ubiquitin ligase deficiency","type":"related"},{"name":"autoimmune disease, multisystem, with facial dysmorphism","type":"related"},{"name":"autoimmune disease, syndromic multisystem","type":"related"},{"name":"syndromic multisystem autoimmune disease","type":"related"},{"name":"syndromic multisystem autoimmune disease due to ITCH deficiency","type":"exact"}],"termid":"MONDO:0013245","xrefs":{"Monarch":{"xref_id":"0013245"}}}


id: FYPO:0000078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular respiration is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cellular respiration","synonyms":[{"name":"abnormal cellular respiration during mitotic cell cycle","type":"related"},{"name":"abnormal cellular respiration during vegetative growth","type":"exact"},{"name":"abnormal respiration","type":"broad"},{"name":"abnormal respiratory metabolism","type":"exact"},{"name":"respiratory metabolism: abnormal","type":"related"}],"termid":"FYPO:0000078"}


id: PBO:0110286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caprin, Cpn1","termid":"PBO:0110286"}


id: PATO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An acidity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"acidity","termid":"PATO:0001842"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased acidity","synonyms":[{"name":"high acidity","type":"exact"}],"termid":"PATO:0001844"}


id: PBO:0072788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma antigen 3, pseudogene","termid":"PBO:0072788"}


id: GO:1901557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fenofibrate stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fenofibrate","termid":"GO:1901557"}


id: GO:0047835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tryptophan + acetyl-CoA = N-acetyl-D-tryptophan + CoA + H+.","definition_xrefs":["RHEA:10060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino-acid N-acetyltransferase activity","termid":"GO:0047812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"D-tryptophan N-acetyltransferase activity","secondary_identifiers":["EC:2.3.1.34","MetaCyc:D-TRYPTOPHAN-N-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R02481"],"synonyms":[{"name":"D-tryptophan acetyltransferase activity","type":"related"},{"name":"acetyl-CoA-D-tryptophan-alpha-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:D-tryptophan N-acetyltransferase activity","type":"related"}],"termid":"GO:0047835"}


id: FYPO:0000352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology","termid":"FYPO:0003063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cytoskeleton morphology during vegetative growth","synonyms":[{"name":"abnormal cytoskeleton morphology during mitotic cell cycle","type":"related"},{"name":"cytoskeleton morphology: abnormal","type":"related"}],"termid":"FYPO:0000352"}


id: GO:1904811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dense core granule transport.","definition_xrefs":["PMID:22699897","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of dense core granule transport","termid":"GO:1904809"},{"relation_name":"positively_regulates","term_name":"dense core granule transport","termid":"GO:1901950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of dense core granule transport","synonyms":[{"name":"activation of dense core granule transport","type":"narrow"},{"name":"activation of dense core vesicle transport","type":"narrow"},{"name":"positive regulation of dense core vesicle transport","type":"exact"},{"name":"up regulation of dense core granule transport","type":"exact"},{"name":"up regulation of dense core vesicle transport","type":"exact"},{"name":"up-regulation of dense core granule transport","type":"exact"},{"name":"up-regulation of dense core vesicle transport","type":"exact"},{"name":"upregulation of dense core granule transport","type":"exact"},{"name":"upregulation of dense core vesicle transport","type":"exact"}],"termid":"GO:1904811"}


id: PBO:0029531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_septum","termid":"PBO:0029531"}


id: MONDO:0021063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the colon. Representative examples include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C9242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic neoplasm","termid":"MONDO:0005401"},{"relation_name":"is_a","term_name":"colorectal cancer","termid":"MONDO:0005575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"malignant colon neoplasm","secondary_identifiers":["ICD9:153.9","MEDGEN:2839","UMLS:C0007102","SCTID:363406005","DOID:219","ICD9:153.8","ICD9:153"],"synonyms":[{"name":"cancer of colon","type":"exact"},{"name":"colon cancer","type":"exact"},{"name":"colon neoplasm, malignant","type":"exact"},{"name":"colon tumor, malignant","type":"exact"},{"name":"malignant colon neoplasm","type":"exact"},{"name":"malignant colon tumor","type":"exact"},{"name":"malignant colon tumour","type":"exact"},{"name":"malignant colonic neoplasm","type":"exact"},{"name":"malignant colonic tumor","type":"exact"},{"name":"malignant colonic tumour","type":"exact"},{"name":"malignant neoplasm of colon","type":"exact"},{"name":"malignant neoplasm of the colon","type":"exact"},{"name":"malignant tumor of colon","type":"exact"},{"name":"malignant tumor of the colon","type":"exact"},{"name":"malignant tumour of colon","type":"exact"},{"name":"malignant tumour of the colon","type":"exact"}],"termid":"MONDO:0021063","xrefs":{"Monarch":{"xref_id":"0021063"}}}


id: PBO:0040762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin 2","termid":"PBO:0040762"}


id: SO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non directional promoter motif with consensus sequence GAAAGCT.","definition_xrefs":["PMID:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDM3_motif","synonyms":[{"name":"NDM3","type":"exact"},{"name":"NDM3 motif","type":"exact"},{"name":"non directional motif 3","type":"exact"}],"termid":"SO:0001168"}


id: PBO:0054826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2239","termid":"PBO:0054826"}


id: PBO:0051320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR15-118 (pseudogene)","termid":"PBO:0051320"}


id: PBO:0088347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate semialdehyde dehydrogenase Hom2","termid":"PBO:0088347"}


id: PBO:0077900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase beta 2","termid":"PBO:0077900"}


id: PBO:0053049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 7, transcriptional regulator","termid":"PBO:0053049"}


id: GO:1900059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sulfate assimilation.","definition_xrefs":["PMID:7891681","GOC:TermGenie","PMID:7601277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of sulfate assimilation","termid":"GO:1900058"},{"relation_name":"positively_regulates","term_name":"sulfate assimilation","termid":"GO:0000103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sulfate assimilation","synonyms":[{"name":"activation of sulfate assimilation","type":"related"},{"name":"activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"activation of sulphate assimilation","type":"exact"},{"name":"activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"positive regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"positive regulation of sulphate assimilation","type":"exact"},{"name":"positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up regulation of sulfate assimilation","type":"related"},{"name":"up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up regulation of sulphate assimilation","type":"exact"},{"name":"up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up-regulation of sulfate assimilation","type":"related"},{"name":"up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up-regulation of sulphate assimilation","type":"exact"},{"name":"up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"upregulation of sulfate assimilation","type":"related"},{"name":"upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"upregulation of sulphate assimilation","type":"exact"},{"name":"upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"}],"termid":"GO:1900059"}


id: GO:0047332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + diphosphate = O-phospho-L-serine + H+ + phosphate.","definition_xrefs":["RHEA:23764","EC:2.7.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"diphosphate-serine phosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R00584","MetaCyc:2.7.1.80-RXN"],"synonyms":[{"name":"diphosphate:L-serine O-phosphotransferase activity","type":"related"},{"name":"pyrophosphate--serine phosphotransferase activity","type":"related"},{"name":"pyrophosphate-L-serine phosphotransferase activity","type":"related"}],"termid":"GO:0047332"}


id: GO:0003038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of oxygen are received and are converted to a molecular signal by chemoreceptors in an aortic body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of reduced oxygen by chemoreceptor signaling","termid":"GO:0003020"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","termid":"GO:0003033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of reduced oxygen by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of reduced oxygen by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003038"}


id: MONDO:0005433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"drug dependence","termid":"MONDO:0005303"},{"relation_name":"is_a","term_name":"substance withdrawal syndrome","termid":"MONDO:0005567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol withdrawal","secondary_identifiers":["SCTID:191480000","icd11.foundation:998231424","UMLS:C0236663","EFO:0004777","ICD9:291.81","MEDGEN:536543"],"synonyms":[{"name":"alcohol withdrawal syndrome","type":"exact"}],"termid":"MONDO:0005433","xrefs":{"Monarch":{"xref_id":"0005433"}}}


id: PBO:0089302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, citrate","termid":"PBO:0089302"}


id: PBO:0083893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier and is involved in gene tethering at the nuclear periphery; NUP100 has a paralog, NUP116, that arose from the whole genome duplication","termid":"PBO:0083893"}


id: PBO:0054732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2141","termid":"PBO:0054732"}


id: PBO:0082937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic chaperone of the Hsp90 family; plays a role in determining prion variants; redundant in function and nearly identical with Hsp82p, and together they are essential; expressed constitutively at 10-fold higher basal levels than HSP82 and induced 2-3 fold by heat shock; contains two acid-rich unstructured regions that promote the solubility of chaperone-substrate complexes; HSC82 has a paralog, HSP82, that arose from the whole genome duplication","termid":"PBO:0082937"}


id: PBO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydroxy Urea Sensitive","termid":"PBO:0000620"}


id: MONDO:0003606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the adrenal medulla","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland cancer","termid":"MONDO:0002817"},{"relation_name":"is_a","term_name":"adrenal medulla neoplasm","termid":"MONDO:0021237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adrenal medulla cancer","secondary_identifiers":["MEDGEN:87485","NCIT:C4396","DOID:5719","SCTID:371965009","UMLS:C0344456","GARD:5755"],"synonyms":[{"name":"adrenal medulla cancer","type":"exact"},{"name":"adrenal medulla neoplasm","type":"broad"},{"name":"adrenal medulla tumor","type":"broad"},{"name":"adrenal medulla tumour","type":"broad"},{"name":"cancer of adrenal medulla","type":"exact"},{"name":"malignant adrenal medulla neoplasm","type":"exact"},{"name":"malignant adrenal medulla tumor","type":"exact"},{"name":"malignant adrenal medulla tumour","type":"exact"},{"name":"malignant neoplasm of adrenal medulla","type":"exact"},{"name":"malignant neoplasm of the adrenal medulla","type":"exact"},{"name":"malignant tumor of adrenal medulla","type":"exact"},{"name":"malignant tumor of the adrenal medulla","type":"exact"},{"name":"malignant tumour of adrenal medulla","type":"exact"},{"name":"malignant tumour of the adrenal medulla","type":"exact"}],"termid":"MONDO:0003606","xrefs":{"Monarch":{"xref_id":"0003606"}}}


id: GO:0071476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hypotonic environment, i.e. an environment with a lower concentration of solutes than the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonic response","termid":"GO:0006971"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hypotonic response","synonyms":[{"name":"cellular hypo-osmotic response","type":"exact"}],"termid":"GO:0071476"}


id: PBO:0048113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2 pseudogene 1","termid":"PBO:0048113"}


id: PBO:0054545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1945","termid":"PBO:0054545"}


id: PBO:0043042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrolectin","termid":"PBO:0043042"}


id: GO:0046557
data:
  {"annotated_genes":["SJAG_01171","SJAG_05001","SJAG_03646"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75041,103865,103866],"is_not":false,"summary":null,"term":"GO:0046557"}]},"cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->6) linkages in (1->6)-beta-D-glucans.","definition_xrefs":["EC:3.2.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01171":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"glucan endo-1,6-beta-glucosidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.75-RXN"],"synonyms":[{"name":"1,6-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"beta-1,6-glucan 6-glucanohydrolase activity","type":"related"},{"name":"beta-1,6-glucan hydrolase activity","type":"related"},{"name":"beta-1,6-glucanase activity","type":"related"},{"name":"beta-1,6-glucanase-pustulanase activity","type":"related"},{"name":"beta-1->6-glucan hydrolase activity","type":"related"},{"name":"endo-(1,6)-beta-D-glucanase activity","type":"exact"},{"name":"endo-(1->6)-beta-D-glucanase activity","type":"related"},{"name":"endo-1,6-beta-D-glucanase activity","type":"related"},{"name":"endo-1,6-beta-glucanase activity","type":"related"},{"name":"endo-beta-1,6-glucanase activity","type":"related"}],"termid":"GO:0046557","terms_by_termid":{"GO:0046557":null}}


id: GO:0060622
data:
  {"annotated_genes":["SJAG_04771","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89341,94281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of ascospore wall beta-glucan biosynthetic process, the chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0090093"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ascospore wall beta-glucan biosynthetic process","termid":"GO:0034412"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0005975","GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"regulation of ascospore wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060622","terms_by_termid":{"GO:0140748":null}}


id: FYPO:0003402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to osmotic stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to osmotic stress","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to osmotic stress","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to osmotic stress during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to osmotic stress","type":"exact"}],"termid":"FYPO:0003402"}


id: GO:0035801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adrenal cortex over time, from its formation to the mature structure. The adrenal cortex is located at the periphery of the adrenal gland and controls glucose and electrolyte metabolism, response to stress and sexual development through the production of different classes of steroid hormones (glucocorticoids, mineralocorticoids and androgens).","definition_xrefs":["PMID:21115154","Wikipedia:Adrenal_cortex","PMID:12185666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"adrenal gland development","termid":"GO:0030325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adrenal cortex development","synonyms":[{"name":"adrenal gland cortex development","type":"exact"}],"termid":"GO:0035801"}


id: GO:0010788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of cis-Golgi to rough ER transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COPI coating of Golgi vesicle","termid":"GO:0048205"},{"relation_name":"part_of","term_name":"vesicle targeting, cis-Golgi to rough endoplasmic reticulum","termid":"GO:0048206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"COPI coating of Golgi vesicle, cis-Golgi to rough ER","termid":"GO:0010788"}


id: PBO:0083150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF RAD24/YER173W","termid":"PBO:0083150"}


id: PBO:0011081
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has fused lysosomes","termid":"PBO:0011081"}


id: PBO:0004167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthase (predicted)","termid":"PBO:0004167"}


id: _global:has_part
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"Inverse of part_of.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"_global:overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_part","secondary_identifiers":["BFO:0000051"],"synonyms":[{"name":"has part","type":"exact"}],"termid":"_global:has_part"}


id: GO:2000137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell proliferation involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000136"},{"relation_name":"negatively_regulates","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000137"}


id: PBO:0083766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential N-acetylglucosamine-phosphate mutase; converts GlcNAc-6-P to GlcNAc-1-P, which is a precursor for the biosynthesis of chitin and for the formation of N-glycosylated mannoproteins and glycosylphosphatidylinositol anchors","termid":"PBO:0083766"}


id: PBO:0065391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate enriched lncRNA","termid":"PBO:0065391"}


id: PBO:0041178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 2 member A3, pseudogene","termid":"PBO:0041178"}


id: GO:0051343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyclic nucleotide phosphodiesterase activity, the catalysis of the reaction: nucleotide 3',5'-cyclic phosphate + H2O = nucleotide 5'-phosphate.","definition_xrefs":["GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyclic-nucleotide phosphodiesterase activity","synonyms":[{"name":"3',5' cyclic nucleotide phosphodiesterase activator","type":"exact"},{"name":"3',5'-cyclic-AMP phosphodiesterase activator","type":"narrow"},{"name":"activation of cyclic nucleotide phosphodiesterase activity","type":"narrow"},{"name":"cAMP phosphodiesterase activator","type":"narrow"},{"name":"phosphodiesterase activator","type":"related"},{"name":"positive regulation of 3',5' cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"positive regulation of 3',5'-cyclic-AMP phosphodiesterase activity","type":"narrow"},{"name":"positive regulation of cAMP phosphodiesterase activity","type":"narrow"},{"name":"positive regulation of cGMP phosphodiesterase activity","type":"narrow"},{"name":"positive regulation of cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"stimulation of cyclic nucleotide phosphodiesterase activity","type":"narrow"},{"name":"up regulation of cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"upregulation of cyclic nucleotide phosphodiesterase activity","type":"exact"}],"termid":"GO:0051343"}


id: PR:Q9HDU0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.17c gene.","definition_xrefs":["UniProtKB:Q9HDU0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein PB2B2.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.17c","synonyms":[{"name":"Spom972h-SPBPB2B2.17c","type":"exact"}],"termid":"PR:Q9HDU0"}


id: CHEBI:17713
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dAMP","termid":"CHEBI:17713"}


id: MONDO:0023726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extragonadal non-seminomatous malignant germ cell tumor that arises from the mediastinum. It is characterized by the presence of small pale cells with small amount of cytoplasm and round to oval nuclei with small nucleoli forming a variety of patterns, including microcystic, macrocystic, pseudopapillary, myxomatous, hepatoid, polyvesicular vitelline, and solid. It manifests with respiratory distress, thoracic pain, fever, and superior vena cava syndrome.","definition_xrefs":["NCIT:C6443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yolk sac tumor","termid":"MONDO:0005744"},{"relation_name":"is_a","term_name":"mediastinal malignant germ cell tumor","termid":"MONDO:0006298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinal yolk sac tumor","secondary_identifiers":["MEDGEN:233176","UMLS:C1334683"],"synonyms":[{"name":"EST","type":"related"},{"name":"endodermal sinus neoplasm of mediastinum","type":"exact"},{"name":"endodermal sinus neoplasm of the mediastinum","type":"exact"},{"name":"endodermal sinus tumor of mediastinum","type":"exact"},{"name":"endodermal sinus tumor of the mediastinum","type":"exact"},{"name":"endodermal sinus tumour of mediastinum","type":"exact"},{"name":"endodermal sinus tumour of the mediastinum","type":"exact"},{"name":"mediastinal endodermal sinus neoplasm","type":"exact"},{"name":"mediastinal endodermal sinus tumor","type":"exact"},{"name":"mediastinal endodermal sinus tumors","type":"related"},{"name":"mediastinal endodermal sinus tumour","type":"exact"},{"name":"mediastinal endodermal sinus tumours","type":"related"},{"name":"mediastinal yolk Sac neoplasm","type":"exact"},{"name":"mediastinal yolk Sac tumor","type":"exact"},{"name":"mediastinal yolk Sac tumour","type":"exact"},{"name":"mediastinum yolk sac tumor","type":"exact"},{"name":"mediastinum yolk sac tumour","type":"exact"},{"name":"yolk Sac neoplasm of mediastinum","type":"exact"},{"name":"yolk Sac neoplasm of the mediastinum","type":"exact"},{"name":"yolk Sac tumor of mediastinum","type":"exact"},{"name":"yolk Sac tumor of the mediastinum","type":"exact"},{"name":"yolk Sac tumour of mediastinum","type":"exact"},{"name":"yolk Sac tumour of the mediastinum","type":"exact"}],"termid":"MONDO:0023726","xrefs":{"Monarch":{"xref_id":"0023726"}}}


id: MONDO:0045032
data:
  {"annotated_genes":["SJAG_00938","SJAG_01941","SJAG_02463","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87322,87321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008964"},{"annotations":[87154,87153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009635"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secretory diarrhea","termid":"MONDO:0000249"},{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital secretory diarrhea","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:579.8","MEDGEN:82757","SCTID:25898005","UMLS:C0267661"],"synonyms":[{"name":"congenital secretory diarrhea","type":"exact"}],"termid":"MONDO:0045032","terms_by_termid":{"MONDO:0008964":null,"MONDO:0009635":null},"xrefs":{"Monarch":{"xref_id":"0045032"}}}


id: PBO:0087182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A34.5; essential for nucleolar assembly and for high polymerase loading rate; nucleolar localization depends on Rpa49p","termid":"PBO:0087182"}


id: PBO:0040988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2","termid":"PBO:0040988"}


id: PBO:0067778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 78","termid":"PBO:0067778"}


id: GO:0097324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of melanocytes from one site to another, often during the development of a multicellular organism. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.","definition_xrefs":["PMID:22637532","CL:0000148","GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanocyte migration","termid":"GO:0097324"}


id: PBO:0017530
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of Sporulation Abnormal mutant","termid":"PBO:0017530"}


id: PR:A6X972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gon7 gene.","definition_xrefs":["UniProtKB:A6X972","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit gon7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.18","synonyms":[{"name":"Spom972h-gon7","type":"exact"}],"termid":"PR:A6X972"}


id: GO:0072080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a nephron tubule over time, from its initial formation to the mature structure. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubule development","termid":"GO:0061326"},{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron tubule development","termid":"GO:0072080"}


id: GO:0070405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ammonium ions (NH4+).","definition_xrefs":["GOC:ecd","CHEBI:28938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ammonium ion binding","synonyms":[{"name":"ammonium binding","type":"related"}],"termid":"GO:0070405"}


id: PR:P79015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3202 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.10","synonyms":[{"name":"Spom972h-rpl3202","type":"exact"}],"termid":"PR:P79015"}


id: PBO:0067656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 833, pseudogene","termid":"PBO:0067656"}


id: PBO:0054523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1923","termid":"PBO:0054523"}


id: GO:1902235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:20160352","GOC:mtg_apoptosis","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0070059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of ER stress-induced apoptosis","type":"exact"},{"name":"regulation of apoptosis in response to ER stress","type":"exact"},{"name":"regulation of apoptosis in response to endoplasmic reticulum stress","type":"broad"},{"name":"regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1902235"}


id: GO:0031472
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle found in bacteria consisting of a proteinaceous coat containing enzymes for the degradation of 1,2-propanediol whose purpose is the protection of the rest of the cell from the toxic propionaldehyde product of the enzyme diol dehydratase.","definition_xrefs":["PMID:12923081","GOC:js","PMID:10498708","PMID:11844753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial microcompartment","termid":"GO:0031469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"propanediol degradation polyhedral organelle","termid":"GO:0031472"}


id: PR:O74483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15588:SF5","PRO:DNx","OMA:SCHPO05010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.10","secondary_identifiers":["UniProtKB:O74483"],"synonyms":[{"name":"Spom972h-LSM8","type":"exact"}],"termid":"PR:O74483"}


id: MONDO:0026729
data:
  {"annotated_genes":["SJAG_03333"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87752],"is_not":false,"summary":null,"term":"MONDO:0026729"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03333":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type ICC","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:301031","MEDGEN:1684742","DOID:0111839","UMLS:C5231393"],"synonyms":[{"name":"CDG1CC","type":"related"},{"name":"CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Icc","type":"related"},{"name":"congenital disorder of glycosylation, type Icc, X-linked recessive","type":"exact"}],"termid":"MONDO:0026729","terms_by_termid":{"MONDO:0026729":null},"xrefs":{"Monarch":{"xref_id":"0026729"}}}


id: FYECO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Calcium ions were completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium absent","termid":"FYECO:0000150"}


id: PBO:0052676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 44","termid":"PBO:0052676"}


id: GO:0003017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The flow of lymph through the body of an animal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymph circulation","termid":"GO:0003017"}


id: MONDO:0850109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-specific autoimmune cerebellar ataxia without characteristic antibodies","secondary_identifiers":["MEDGEN:1843044","Orphanet:624268","UMLS:C5576703","GARD:22504"],"termid":"MONDO:0850109","xrefs":{"Monarch":{"xref_id":"0850109"}}}


id: PR:Q92347
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar protein 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01355","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.02c","secondary_identifiers":["UniProtKB:Q92347"],"synonyms":[{"name":"Spom972h-NOP9","type":"exact"},{"name":"pumilio domain-containing protein nop9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92347"}


id: PBO:0064905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 regulatory subunit B, alpha","termid":"PBO:0064905"}


id: GO:0060695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of cholesterol transporter activity.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cholesterol transporter activity (obsolete GO:0060695)","termid":"GO:0060695"}


id: FYPO:0001487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to heat is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during cellular response to heat","synonyms":[{"name":"normal RNA accumulation during cellular response to heat","type":"related"},{"name":"normal RNA level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to heat during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to high temperature","type":"exact"},{"name":"normal mRNA level during cellular response to heat","type":"narrow"},{"name":"normal transcript level during cellular response to heat","type":"exact"}],"termid":"FYPO:0001487"}


id: PBO:0063776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 3","termid":"PBO:0063776"}


id: GO:0061999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac endothelial to mesenchymal transition.","definition_xrefs":["PMID:26857067","GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cardiac endothelial to mesenchymal transition","termid":"GO:0140074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0061999"}


id: PBO:0004519
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.12","termid":"PBO:0004519"}


id: GO:0007393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell within the dorsal ectoderm becomes capable of differentiating autonomously into a leading edge cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators","GOC:bf","PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading edge cell fate determination","termid":"GO:0035028"},{"relation_name":"part_of","term_name":"dorsal closure, leading edge cell fate commitment","termid":"GO:0035029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, leading edge cell fate determination","termid":"GO:0007393"}


id: PATO:0000570
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A height which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"height","termid":"PATO:0000119"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased height","synonyms":[{"name":"tall","type":"related"}],"termid":"PATO:0000570"}


id: MOD:00860
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that produces an amino acid residue containing an exogenous sulfur atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur containing modified residue","termid":"MOD:00860"}


id: MONDO:0015315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal brainstem dysfunction is a rare neurologic disease characterized by the association of suction-swallowing dysfunction, abnormal laryngeal sensitivity and motility (manifesting with dyspnea or obstructive apnea-hypopnea), gastroesophageal reflux (generally resistant to medication) and cardiac vagal overactivity (e.g. brachycardia, vasovagal episodes) of varying degrees of severity. Impaired social interaction has also been reported.","definition_xrefs":["Orphanet:137929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal brainstem dysfunction","secondary_identifiers":["GARD:19892","MEDGEN:1665998","UMLS:C4749374"],"termid":"MONDO:0015315","xrefs":{"Monarch":{"xref_id":"0015315"}}}


id: PBO:0067878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 180","termid":"PBO:0067878"}


id: FYPO:0000373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of RNA modification is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of RNA modification","synonyms":[{"name":"RNA modification: decreased rate","type":"related"},{"name":"decreased rate of RNA modification during mitotic cell cycle","type":"related"},{"name":"decreased rate of RNA modification during vegetative growth","type":"exact"},{"name":"reduced rate of RNA modification","type":"exact"}],"termid":"FYPO:0000373"}


id: PBO:0052848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-4","termid":"PBO:0052848"}


id: GO:0042337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis and deposition of a chitin-based non-cellular, hardened, or membranous secretion from an epithelial sheet, occurring as part of the molting cycle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:tb","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle development","termid":"GO:0040003"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle development involved in chitin-based cuticle molting cycle","synonyms":[{"name":"chitin-based cuticle development during molting","type":"related"},{"name":"cuticle anabolism during molting","type":"broad"},{"name":"cuticle biosynthetic process during molting","type":"broad"},{"name":"cuticle formation during molting","type":"broad"},{"name":"cuticle synthesis during molting","type":"broad"}],"termid":"GO:0042337"}


id: GO:0042380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the formation of both isopentenyl pyrophosphate and dimethylallyl pyrophosphate from (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate.","definition_xrefs":["PMID:11818558","GOC:js"],"gene_count":0,"genotype_count":0,"name":"obsolete hydroxymethylbutenyl pyrophosphate reductase activity (obsolete GO:0042380)","synonyms":[{"name":"(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)","type":"exact"}],"termid":"GO:0042380"}


id: PBO:0042841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 45","termid":"PBO:0042841"}


id: PBO:0055736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomodin 2","termid":"PBO:0055736"}


id: GO:0015262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete taurine channel activity (obsolete GO:0015262)","synonyms":[{"name":"taurine channel activity","type":"exact"}],"termid":"GO:0015262"}


id: PBO:0048286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase like 6","termid":"PBO:0048286"}


id: PBO:0049814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 6","termid":"PBO:0049814"}


id: MONDO:0006231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic, hamartomatous polyp that arises from the stomach, small intestine, and large intestine. This group includes the juvenile polyps and Peutz-Jeghers polyps.","definition_xrefs":["NCIT:C96475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"},{"relation_name":"is_a","term_name":"gastrointestinal polyp","termid":"MONDO:0024292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastrointestinal hamartoma","secondary_identifiers":["EFO:1000280","MEDGEN:474435","UMLS:C3272802"],"synonyms":[{"name":"gastrointestinal hamartoma","type":"exact"}],"termid":"MONDO:0006231","xrefs":{"Monarch":{"xref_id":"0006231"}}}


id: PBO:0061124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 13","termid":"PBO:0061124"}


id: PBO:0091920
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human nuclear UNG","termid":"PBO:0091920"}


id: MONDO:0011332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dyserythropoiesis, congenital, with ultrastructurally normal erythroblast heterochromatin","secondary_identifiers":["UMLS:C3807235","OMIM:603529","MEDGEN:813565"],"synonyms":[{"name":"Dyserythropoiesis, congenital, with ultrastructurally normal erythroblast heterochromatin","type":"exact"}],"termid":"MONDO:0011332","xrefs":{"Monarch":{"xref_id":"0011332"}}}


id: GO:0047444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoenolpyruvate + N-acyl-D-mannosamine 6-phosphate = phosphate + N-acylneuraminate 9-phosphate.","definition_xrefs":["EC:2.5.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"N-acylneuraminate-9-phosphate synthase activity","secondary_identifiers":["GO:0019007","MetaCyc:RXN-9988","Reactome:R-HSA-4084976","RHEA:13421"],"synonyms":[{"name":"N-acetylneuraminate 9-phosphate lyase activity","type":"related"},{"name":"N-acetylneuraminate 9-phosphate sialic acid 9-phosphate synthase activity","type":"related"},{"name":"N-acetylneuraminate 9-phosphate synthetase activity","type":"related"},{"name":"N-acetylneuraminic acid phosphate synthase activity","type":"exact"},{"name":"N-acylneuraminate-9-phosphate pyruvate-lyase (pyruvate-phosphorylating) activity","type":"related"},{"name":"phosphoenolpyruvate:N-acyl-D-mannosamine-6-phosphate 1-(2-carboxy-2-oxoethyl)transferase activity","type":"related"},{"name":"sialic acid 9-phosphate synthetase activity","type":"related"}],"termid":"GO:0047444"}


id: PBO:0074185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 6","termid":"PBO:0074185"}


id: PBO:0083830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanol acetyltransferase; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion","termid":"PBO:0083830"}


id: GO:0019359
data:
  {"annotated_genes":["SJAG_01500","SJAG_04693","SJAG_01582","SJAG_02889","SJAG_03946","SJAG_02618","SJAG_03298","SJAG_01566"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76535,79445,115077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[72568,81889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[79755,81671,72878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide nucleotides, any nucleotide that contains combined nicotinamide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleotide biosynthetic process","termid":"GO:0019363"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_03946":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nicotinamide nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nicotinamide nucleotide anabolism","type":"exact"},{"name":"nicotinamide nucleotide biosynthesis","type":"exact"},{"name":"nicotinamide nucleotide formation","type":"exact"},{"name":"nicotinamide nucleotide synthesis","type":"exact"}],"termid":"GO:0019359","terms_by_termid":{"GO:0006741":null,"GO:0009435":null,"GO:0034355":null}}


id: MONDO:0005093
data:
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id: GO:0046782
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the transcription of the viral genome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"regulates","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral transcription","termid":"GO:0046782"}


id: PBO:0026902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ribonucleotide_incorporation_on_lagging_strand","termid":"PBO:0026902"}


id: GO:0016864
data:
  {"annotated_genes":["SJAG_04046","SJAG_03414","SJAG_02301","SJAG_00131","SJAG_04904","SJAG_00288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90450,117861,74562,102681,71961,111952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003756"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, one or more sulfur-sulfur bonds in the molecule are rearranged, and no oxidized product appears.","definition_xrefs":["GOC:mah","EC:5.3.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00131":null,"SJAG_00288":null,"SJAG_02301":null,"SJAG_03414":null,"SJAG_04046":null,"SJAG_04904":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, transposing S-S bonds","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"intramolecular isomerase activity, transposing S-S bonds","type":"exact"}],"termid":"GO:0016864","terms_by_termid":{"GO:0003756":null}}


id: MONDO:0019763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 3 is a congenital respiratory tract anomaly characterized by a cleft extending through the cricoid cartilage, sometimes into the cervical trachea, with severe swallowing disorders, lung infections and pulmonary damage.","definition_xrefs":["Orphanet:93940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 3","secondary_identifiers":["MEDGEN:667241","UMLS:C0584825","GARD:16833"],"synonyms":[{"name":"LTEC III","type":"exact"},{"name":"LTEC3","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 3","type":"exact"}],"termid":"MONDO:0019763","xrefs":{"Monarch":{"xref_id":"0019763"}}}


id: PR:Q10106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-associated protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00917","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.06","secondary_identifiers":["UniProtKB:Q10106"],"synonyms":[{"name":"Spom972h-UTP11L","type":"exact"},{"name":"U3 snoRNA-associated protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10106"}


id: MONDO:0009754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant severe congenital neutropenia","termid":"MONDO:0008742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0000426","MONDO:0005570"],"is_obsolete":false,"name":"neutropenia, lethal congenital, with eosinophilia","secondary_identifiers":["MESH:C564943","OMIM:257100","UMLS:C1850381","GARD:6107","MEDGEN:338037"],"synonyms":[{"name":"lethal congenital neutropenia with eosinophilia","type":"related"},{"name":"neutropenia lethal congenital with eosinophilia","type":"related"},{"name":"neutropenia, lethal congenital, with eosinophilia","type":"exact"}],"termid":"MONDO:0009754","xrefs":{"Monarch":{"xref_id":"0009754"}}}


id: GO:0070714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an guanosine-uridine insertion dinucleotide.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA guanosine-uridine insertion","synonyms":[{"name":"RNA GU insertion","type":"exact"}],"termid":"GO:0070714"}


id: GO:0004315
data:
  {"annotated_genes":["SJAG_01946","SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58724,78727],"is_not":false,"summary":null,"term":"GO:0004315"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-[acyl-carrier protein] + malonyl-[acyl-carrier protein] = 3-oxoacyl-[acyl-carrier protein] + CO2 + [acyl-carrier protein].","definition_xrefs":["RHEA:22836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01946":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] synthase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3-OXOACYL-ACP-SYNTH-RXN","GO:0033817","EC:2.3.1.41"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein synthase activity","type":"related"},{"name":"3-oxoacyl-ACP synthase activity","type":"exact"},{"name":"3-oxoacyl-[acyl-carrier protein] synthase activity","type":"exact"},{"name":"3-oxoacyl-acyl carrier protein synthase I activity","type":"narrow"},{"name":"3-oxoacyl-acyl-carrier-protein synthase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:malonyl-acyl-carrier-protein C-acyltransferase (decarboxylating)","type":"related"},{"name":"acyl-malonyl acyl carrier protein-condensing enzyme activity","type":"related"},{"name":"acyl-malonyl(acyl-carrier-protein)-condensing enzyme activity","type":"related"},{"name":"beta-ketoacyl acyl carrier protein synthase activity","type":"related"},{"name":"beta-ketoacyl synthetase activity","type":"related"},{"name":"beta-ketoacyl-ACP synthase I activity","type":"narrow"},{"name":"beta-ketoacyl-ACP synthase II activity","type":"narrow"},{"name":"beta-ketoacyl-ACP synthetase activity","type":"related"},{"name":"beta-ketoacyl-[acyl carrier protein] synthase activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein synthase activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein synthetase activity","type":"related"},{"name":"beta-ketoacyl-acyl-carrier-protein synthase I","type":"narrow"},{"name":"beta-ketoacyl-acyl-carrier-protein synthase II activity","type":"narrow"},{"name":"beta-ketoacylsynthase activity","type":"related"},{"name":"condensing enzyme activity","type":"broad"},{"name":"fatty acid condensing enzyme activity","type":"broad"},{"name":"ketoacyl-ACP synthase activity","type":"exact"}],"termid":"GO:0004315","terms_by_termid":{"GO:0004315":null}}


id: GO:1903752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to hydrogen peroxide.","definition_xrefs":["GO_REF:0000058","PMID:18681888","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901300"},{"relation_name":"is_a","term_name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902177"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:1903750"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"activation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"activation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"activation of intrinsic apoptotic signaling pathway in response to H2O2","type":"narrow"},{"name":"activation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"narrow"},{"name":"positive regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"positive regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"up regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"up regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"up-regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"up-regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"upregulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"upregulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"}],"termid":"GO:1903752"}


id: GO:0042185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of m-xylene, 1,3-dimethylbenzene, a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:go_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"m-xylene metabolic process","termid":"GO:0018949"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-xylene catabolic process","secondary_identifiers":["MetaCyc:PWY-142"],"synonyms":[{"name":"m-xylene breakdown","type":"exact"},{"name":"m-xylene catabolism","type":"exact"},{"name":"m-xylene degradation","type":"exact"},{"name":"meta-xylene catabolic process","type":"exact"},{"name":"meta-xylene catabolism","type":"exact"}],"termid":"GO:0042185"}


id: GO:0071593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one lymphocyte to one or more other lymphocytes via adhesion molecules.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte aggregation","termid":"GO:0070486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"lymphocyte aggregation","termid":"GO:0071593"}


id: MONDO:0008726
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87446],"is_not":false,"summary":null,"term":"MONDO:0008726"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Antley-Bixler syndrome","termid":"MONDO:0008803"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:63269","GARD:16665","MEDGEN:461449","UMLS:C3150099","OMIM:201750","NCIT:C178415"],"synonyms":[{"name":"ABS1","type":"related"},{"name":"Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis","type":"exact"},{"name":"Antley-Bixler syndrome with genital anomaly and disorder of steroidogenesis","type":"exact"}],"termid":"MONDO:0008726","terms_by_termid":{"MONDO:0008726":null},"xrefs":{"Monarch":{"xref_id":"0008726"}}}


id: MONDO:0017219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microform holoprosencephaly is a benign form of holoprosencephaly (HPE) characterized by midline defects without the typical HPE defect in brain cleavage.","definition_xrefs":["Orphanet:280200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"microform holoprosencephaly","secondary_identifiers":["DOID:0111380","MEDGEN:1711978","UMLS:C5393309","GARD:17290","ICD10CM:Q04.2","icd11.foundation:44293173"],"synonyms":[{"name":"HPE, minor form","type":"exact"},{"name":"HPE-L","type":"exact"},{"name":"HoloprosencC)phalie, minor form","type":"exact"},{"name":"Holoprosencéphalie, minor form","type":"exact"},{"name":"Microform HPE","type":"exact"},{"name":"holoprosencephaly-like","type":"exact"}],"termid":"MONDO:0017219","xrefs":{"Monarch":{"xref_id":"0017219"}}}


id: FYPO:0005616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during cellular response to bleomycin","termid":"FYPO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to bleomycin","synonyms":[{"name":"abolished protein phosphorylation during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to bleomycin during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to bleomycin","type":"exact"}],"termid":"FYPO:0005616"}


id: PBO:0000518
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.11.1","termid":"PBO:0000518"}


id: GO:1900044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"regulates","term_name":"protein K63-linked ubiquitination","termid":"GO:0070534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein K63-linked ubiquitination","synonyms":[{"name":"regulation of protein K63-linked polyubiquitination","type":"exact"}],"termid":"GO:1900044"}


id: GO:0030636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of derivatives of acetic acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete acetate derivative biosynthetic process (obsolete GO:0030636)","synonyms":[{"name":"acetate derivative anabolism","type":"exact"},{"name":"acetate derivative biosynthesis","type":"exact"},{"name":"acetate derivative biosynthetic process","type":"exact"},{"name":"acetate derivative formation","type":"exact"},{"name":"acetate derivative synthesis","type":"exact"}],"termid":"GO:0030636"}


id: GO:0005172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor binding","synonyms":[{"name":"VEGF receptor binding","type":"exact"},{"name":"VEGFR binding","type":"exact"},{"name":"vascular endothelial growth factor","type":"narrow"},{"name":"vascular endothelial growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005172"}


id: PBO:0056269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEF2 activating motif and SAP domain containing transcriptional regulator","termid":"PBO:0056269"}


id: GO:0102447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rhamnetin + S-adenosyl-L-methionine = H+ + rhamnacene + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"rhamnetin 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13933"],"termid":"GO:0102447"}


id: FYPO:0009000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic interphase in which cytoplasmic microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule occurs at a lower rate, or speed, than normal.","definition_xrefs":["PMID:36633091","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of microtubule polymerization during vegetative growth","termid":"FYPO:0005703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of cytoplasmic microtubule polymerization during mitotic interphase","synonyms":[{"name":"decreased cytoplasmic microtubule growth rate during mitotic interphase","type":"exact"},{"name":"decreased cytoplasmic microtubule growth speed during mitotic interphase","type":"exact"},{"name":"decreased cytoplasmic microtubule polymerisation speed during mitotic interphase","type":"exact"},{"name":"decreased cytoplasmic microtubule polymerization speed during mitotic interphase","type":"exact"},{"name":"decreased rate of cytoplasmic microtubule polymerisation during mitotic interphase","type":"exact"}],"termid":"FYPO:0009000"}


id: PR:P00332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alcohol dehydrogenase, propanol-preferring that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.01","secondary_identifiers":["UniProtKB:P00332"],"synonyms":[{"name":"Spom972h-adhP","type":"exact"}],"termid":"PR:P00332"}


id: PBO:0108981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 5","termid":"PBO:0108981"}


id: PBO:0028038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_disassembly","termid":"PBO:0028038"}


id: FYPO:0001898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain fewer cytoplasmic mRNA processing bodies (P-bodies) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"P-bodies present in decreased numbers","synonyms":[{"name":"P bodies present in decreased numbers","type":"exact"},{"name":"P-bodies present in reduced numbers","type":"exact"},{"name":"cytoplasmic mRNA processing bodies present in decreased numbers","type":"exact"},{"name":"decreased P-body formation","type":"related"},{"name":"decreased P-body number","type":"exact"},{"name":"decreased number of P-bodies present","type":"exact"},{"name":"fewer P-bodies present","type":"exact"}],"termid":"FYPO:0001898"}


id: MONDO:0018588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, systemic amyloidosis characterized by slowly progressive renal disease presenting with proteinuria, hypertension and decreased glomerular filtration rate leading to progressive renal failure. Histology reveals amyloid deposits of leukocyte chemotactic factor-2 protein in the renal cortical interstitium, tubular basement membranes, glomeruli and the vessel walls. Extra-renal deposits can be seen in the liver, lungs, spleen and adrenal glands.","definition_xrefs":["Orphanet:439224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"ALECT2 amyloidosis","secondary_identifiers":["MEDGEN:1801621","GARD:21827","UMLS:C5680047","icd11.foundation:1363099940"],"synonyms":[{"name":"LECT2 amyloidosis","type":"exact"},{"name":"leukocyte chemotactic factor-2 amyloidosis","type":"exact"}],"termid":"MONDO:0018588","xrefs":{"Monarch":{"xref_id":"0018588"}}}


id: MONDO:0100204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus type 2.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent","PMID:27197630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 2 infectious disease","synonyms":[{"name":"human rubulavirus 2 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 2","type":"exact"},{"name":"infection due to human parainfluenza virus 2","type":"exact"}],"termid":"MONDO:0100204","xrefs":{"Monarch":{"xref_id":"0100204"}}}


id: PBO:0051895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 4","termid":"PBO:0051895"}


id: FYPO:0008018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PMID:7903653","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on glutamine nitrogen source","synonyms":[{"name":"normal cell population growth on glutamine nitrogen source","type":"exact"}],"termid":"FYPO:0008018"}


id: PBO:0064404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase related protein 2 (gene/pseudogene)","termid":"PBO:0064404"}


id: GO:0005953
data:
  {"annotated_genes":["SJAG_04923","SJAG_03029"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73028,75721],"is_not":false,"summary":null,"term":"GO:0005953"}]},"cv_name":"cellular_component","definition":"A heterodimeric enzyme, composed of an alpha and a beta subunit. Participates in the post-translational C-terminal modification of several small GTPases, allowing their targeting to the membrane.","definition_xrefs":["PMID:9781874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03029":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CAAX-protein geranylgeranyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005953","terms_by_termid":{"GO:0005953":null}}


id: GO:0004787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine diphosphate + H2O = thiamine monophosphate + phosphate.","definition_xrefs":["GOC:ai","RHEA:27998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thiamine diphosphate phosphatase activity","synonyms":[{"name":"TPPase activity","type":"exact"},{"name":"thiamin pyrophosphatase activity","type":"exact"},{"name":"thiamin-pyrophosphatase activity","type":"exact"},{"name":"thiamine diphosphatase activity","type":"broad"},{"name":"thiamine pyrophosphatase activity","type":"exact"},{"name":"thiamine-diphosphatase activity","type":"exact"},{"name":"thiaminpyrophosphatase activity","type":"related"}],"termid":"GO:0004787"}


id: PBO:0030439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_methylation","termid":"PBO:0030439"}


id: PBO:0072085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 15","termid":"PBO:0072085"}


id: GO:0030560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of pseudouridylation in a tRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification guide activity","termid":"GO:0030557"},{"relation_name":"is_a","term_name":"RNA pseudouridylation guide activity","termid":"GO:0030558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"tRNA pseudouridylation guide activity","termid":"GO:0030560"}


id: GO:1900528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of cell shape that is involved in G1 to G0 transition.","definition_xrefs":["GOC:TermGenie","PMID:19366728","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape involved in G1 to G0 transition (obsolete GO:1900528)","synonyms":[{"name":"regulation of cell shape involved in G1 to G0 transition","type":"exact"},{"name":"regulation of cell shape involved in G1/G0 transition","type":"exact"},{"name":"regulation of cell shape involved in cell cycle quiescence","type":"related"},{"name":"regulation of cell shape involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of cell shape involved in stationary phase","type":"related"}],"termid":"GO:1900528"}


id: GO:0061596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 2,3-dihydroxypropane-1-sulfonate + NAD+ = 3-sulfolactaldehyde + NADH + H+.","definition_xrefs":["EC:1.1.1.373","GOC:dph","PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-sulfolactaldehyde reductase activity","secondary_identifiers":["RHEA:40511","MetaCyc:RXN-15299"],"termid":"GO:0061596"}


id: PBO:0090965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex large subunit Rpc1","termid":"PBO:0090965"}


id: GO:0002566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor genes are diversified through somatic mutation.","definition_xrefs":["ISBN:0781735149","PMID:16102575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors via somatic mutation","termid":"GO:0002566"}


id: PBO:0074596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 9","termid":"PBO:0074596"}


id: PBO:0077340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 79","termid":"PBO:0077340"}


id: MONDO:0971174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 9b","secondary_identifiers":["MEDGEN:1860851","OMIM:620887","UMLS:C5935635"],"termid":"MONDO:0971174","xrefs":{"Monarch":{"xref_id":"0971174"}}}


id: PR:Q9USZ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpa34 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USZ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.05","synonyms":[{"name":"RNA polymerase I subunit A34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpa34","type":"exact"}],"termid":"PR:Q9USZ4"}


id: MONDO:0006506
data:
  {"annotated_genes":["SJAG_04334","SJAG_01162","SJAG_02297","SJAG_01351","SJAG_04495","SJAG_00839","SJAG_02796","SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[87742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[88046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[88018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[88694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[88300,88301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[87436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"}]},"cv_name":"mondo","definition":"Any one of a group of congenital hemolytic anemias in which there is no abnormal hemoglobin or spherocytosis and in which there is a defect of glycolysis in the erythrocyte. Common causes include deficiencies in glucose-6-phosphate isomerase; pyruvate kinase; and glucose-6-phosphate dehydrogenase.","definition_xrefs":["MESH:D000746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anemia","termid":"MONDO:0000577"},{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00839":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01351":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"congenital nonspherocytic hemolytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2861","ICD9:282.3","OMIMPS:300908","UMLS:C0002882","MEDGEN:284","SCTID:301317008","EFO:1000641"],"synonyms":[{"name":"HNSHA","type":"exact"},{"name":"anemia, congenital, nonspherocytic hemolytic","type":"exact"},{"name":"hereditary nonspherocytic hemolytic anaemia","type":"exact"},{"name":"hereditary nonspherocytic hemolytic anemia","type":"exact"}],"termid":"MONDO:0006506","terms_by_termid":{"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009340":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null,"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0006506"}}}


id: PBO:0004626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Dnt1","termid":"PBO:0004626"}


id: MONDO:0007036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic syndrome featuring connective tissue abnormalities. Clinical signs include brachycephaly, arachnodactyly, receding mandible and joint laxity at the hands and feet.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Achard syndrome","secondary_identifiers":["UMLS:C1332135","MEDGEN:272277","NCIT:C35809","OMIM:100700","DOID:6686","MESH:C536012"],"synonyms":[{"name":"Achard syndrome","type":"exact"},{"name":"arachnodactyly, receding lower jaw and joint laxity of hands/feet","type":"related"}],"termid":"MONDO:0007036","xrefs":{"Monarch":{"xref_id":"0007036"}}}


id: PBO:0067429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 549, pseudogene","termid":"PBO:0067429"}


id: FYPO:0001718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malonic acid into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal malonic acid import","termid":"FYPO:0001717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased malonic acid import","synonyms":[{"name":"decreased malonate import","type":"related"},{"name":"decreased malonic acid import across plasma membrane","type":"exact"},{"name":"decreased malonic acid import during mitotic cell cycle","type":"related"},{"name":"decreased malonic acid import during vegetative growth","type":"exact"},{"name":"decreased malonic acid import into cell","type":"exact"},{"name":"decreased malonic acid uptake","type":"exact"},{"name":"reduced malonic acid import","type":"exact"}],"termid":"FYPO:0001718"}


id: GO:0032206
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomere maintenance","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of telomere maintenance","type":"narrow"},{"name":"stimulation of telomere maintenance","type":"narrow"},{"name":"up regulation of telomere maintenance","type":"exact"},{"name":"up-regulation of telomere maintenance","type":"exact"},{"name":"upregulation of telomere maintenance","type":"exact"}],"termid":"GO:0032206","terms_by_termid":{"GO:0032215":null}}


id: PBO:0005069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex small subunit (predicted)","termid":"PBO:0005069"}


id: PBO:0089378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase e1 component alpha subunit Pda1","termid":"PBO:0089378"}


id: GO:0034426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a etioplast and form the etioplast envelope.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"etioplast envelope","termid":"GO:0034425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"etioplast membrane","termid":"GO:0034426"}


id: MONDO:0011756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Senior-Loken syndrome in which the cause of the disease is a mutation in the NPHP4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Senior-Loken syndrome","termid":"MONDO:0017842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"Senior-Loken syndrome 4","secondary_identifiers":["MEDGEN:337697","GARD:15406","OMIM:606996","MESH:C537581","UMLS:C1846979"],"synonyms":[{"name":"NPHP4 Senior-Loken syndrome","type":"exact"},{"name":"SENIOR-Loken syndrome 4","type":"related"},{"name":"SLSN4","type":"related"},{"name":"Senior-Loken syndrome 4","type":"exact"},{"name":"Senior-Loken syndrome caused by mutation in NPHP4","type":"exact"},{"name":"Senior-Loken syndrome type 4","type":"exact"}],"termid":"MONDO:0011756","xrefs":{"Monarch":{"xref_id":"0011756"}}}


id: MONDO:0011848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"headache associated with sexual activity","secondary_identifiers":["UMLS:C0393754","MEDGEN:95989","OMIM:607504","ICD10CM:G44.82"],"synonyms":[{"name":"HSA","type":"related"},{"name":"benign sexual headache","type":"related"},{"name":"headache associated with sexual activity","type":"exact"}],"termid":"MONDO:0011848","xrefs":{"Monarch":{"xref_id":"0011848"}}}


id: PBO:0069071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 318, pseudogene","termid":"PBO:0069071"}


id: RO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a condition (a phenotype or disease) of a host and a material entity, in which the material entity is not part of the host, and is considered harmless to non-allergic hosts, and the condition results in pathological processes that include an abnormally strong immune response against the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_allergic_trigger","termid":"RO:0001022"}


id: PBO:0038317
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"authors","termid":"PBO:0038317"}


id: PBO:0055674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIPC antisense RNA 1","termid":"PBO:0055674"}


id: PBO:0090775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K9 methyltransferase Clr4","termid":"PBO:0090775"}


id: PBO:0053898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1186","termid":"PBO:0053898"}


id: PBO:0064308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"procollagen-lysine,2-oxoglutarate 5-dioxygenase 3","termid":"PBO:0064308"}


id: PBO:0046731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVX1 antisense RNA","termid":"PBO:0046731"}


id: GO:0031654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of heat dissipation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"heat dissipation","termid":"GO:0031653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heat dissipation","termid":"GO:0031654"}


id: GO:0019807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acyl-L-aspartate + H2O = a fatty acid anion + L-aspartate.","definition_xrefs":["EC:3.5.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"aspartoacylase activity","secondary_identifiers":["MetaCyc:ASPARTOACYLASE-RXN","RHEA:10872","Reactome:R-HSA-5691507"],"synonyms":[{"name":"N-acetylaspartate amidohydrolase activity","type":"related"},{"name":"N-acyl-L-aspartate amidohydrolase activity","type":"related"},{"name":"acetyl-aspartic deaminase activity","type":"related"},{"name":"acylase II","type":"related"},{"name":"aminoacylase II activity","type":"related"}],"termid":"GO:0019807"}


id: GO:0102569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: FR-900098 + 2-oxoglutarate(2-) + O2 = FR-33289 + succinate(2-) + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete FR-33289 synthase activity (obsolete GO:0102569)","termid":"GO:0102569"}


id: PBO:0054486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1886","termid":"PBO:0054486"}


id: GO:1904721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA endonucleolytic cleavage involved in unfolded protein response.","definition_xrefs":["GOC:PARL","PMID:19328063","GOC:TermGenie","GO_REF:0000058","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA endonucleolytic cleavage involved in unfolded protein response (obsolete GO:1904721)","synonyms":[{"name":"down regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"down regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"down regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"down regulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"down regulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"down-regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"down-regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"down-regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"down-regulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"down-regulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"downregulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"downregulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"downregulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"downregulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"downregulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"inhibition of HAC1 mRNA cleavage","type":"narrow"},{"name":"inhibition of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"inhibition of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"inhibition of XBP1 mRNA cleavage","type":"narrow"},{"name":"inhibition of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"narrow"},{"name":"negative regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"negative regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"negative regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"negative regulation of XBP1 mRNA cleavage","type":"narrow"}],"termid":"GO:1904721"}


id: PBO:0031484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_spindle_assembly","termid":"PBO:0031484"}


id: GO:0008718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor.","definition_xrefs":["RHEA:18125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-amino-acid dehydrogenase activity","synonyms":[{"name":"D-amino-acid:(acceptor) oxidoreductase (deaminating)","type":"exact"},{"name":"D-amino-acid:acceptor oxidoreductase (deaminating)","type":"exact"}],"termid":"GO:0008718"}


id: GO:1900908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of olefin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olefin metabolic process","synonyms":[{"name":"regulation of olefin metabolism","type":"exact"}],"termid":"GO:1900908"}


id: SO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a chromoplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chromoplast_sequence","termid":"SO:0000744"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_chromosome","synonyms":[{"name":"chromoplast chromosome","type":"exact"}],"termid":"SO:0000821"}


id: PBO:0109838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase core complex-Piccolo HAT module linker protein Epl1","termid":"PBO:0109838"}


id: PBO:0042571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein N-terminal like","termid":"PBO:0042571"}


id: GO:0034625
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79525,93801],"is_not":false,"summary":null,"term":"GO:0034625"}]},"cv_name":"biological_process","definition":"Elongation of a fatty acid chain into which one C-C double bond has been introduced.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid elongation, unsaturated fatty acid","termid":"GO:0019368"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fatty acid elongation, monounsaturated fatty acid","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034625","terms_by_termid":{"GO:0034625":null}}


id: PBO:0086450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative medium-chain alcohol dehydrogenase with similarity to BDH1; transcription induced by constitutively active PDR1 and PDR3","termid":"PBO:0086450"}


id: PBO:0054231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1613","termid":"PBO:0054231"}


id: PBO:0005458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent glutamate dehydrogenase Gdh2 (predicted)","termid":"PBO:0005458"}


id: GO:0003779
data:
  {"annotated_genes":["SJAG_01993","SJAG_02700","SJAG_02431","SJAG_01943","SJAG_01732","SJAG_03086","SJAG_04001","SJAG_02566","SJAG_03088","SJAG_03229","SJAG_01754","SJAG_00970","SJAG_00938","SJAG_01894","SJAG_00677","SJAG_01598","SJAG_04141","SJAG_00279","SJAG_01268","SJAG_00521","SJAG_01384","SJAG_03455","SJAG_03011","SJAG_02075","SJAG_04498","SJAG_04982","SJAG_04886","SJAG_03119","SJAG_02245","SJAG_04621","SJAG_03380","SJAG_03703","SJAG_01964","SJAG_02396","SJAG_04703","SJAG_00152","SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61984,63305,64367,67297,70967,71004,71523,72045,72918],"is_not":false,"summary":null,"term":"GO:0003779"},{"annotations":[78270,72140,80950,79545,78448,77358,82007,77817,71867,76673,76727,72871,73223,79592,80793,80921,78107,71934,79213,77332,78526,81393,81567,75149,76140,81846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051015"},{"annotations":[79046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003786"},{"annotations":[73771,77327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003785"}]},"cv_name":"molecular_function","definition":"Binding to monomeric or multimeric forms of actin, including actin filaments.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00152":null,"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01598":null,"SJAG_01732":null,"SJAG_01754":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02245":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03229":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04141":null,"SJAG_04498":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04886":null,"SJAG_04982":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0008092","GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"actin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000117":null},"synonyms":[{"name":"membrane associated actin binding","type":"narrow"}],"termid":"GO:0003779","terms_by_termid":{"GO:0003779":null,"GO:0003785":null,"GO:0003786":null,"GO:0051015":null}}


id: PBO:0086763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; S288C contains an in-frame stop codon between ORFs YLR030W and YLR031W; YLR031W has a paralog, YMR124W, that arose from the whole genome duplication","termid":"PBO:0086763"}


id: GO:0031511
data:
  {"annotated_genes":["SJAG_04040","SJAG_01928","SJAG_02664","SJAG_04177","SJAG_00350","SJAG_04255","SJAG_04581","SJAG_03619","SJAG_01278","SJAG_00684","SJAG_04696"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62495,91530,91882,96164,96570,99797,107484,108309,115101,115542,116131],"is_not":false,"summary":null,"term":"GO:0031511"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of the inner kinetochore, which is involved in the loading of the centromeric histone h3 variant CENP-A onto centromeres and in centromere specific heterochromatin formation. The complex contains about 12 proteins, of which two are known as Mis6 and Sim4 in S. pombe and CENP-I and CENP-H in human.","definition_xrefs":["PMID:15897182","GOC:vw","PMID:12719471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"inner kinetochore","termid":"GO:0000939"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00350":null,"SJAG_00684":null,"SJAG_01278":null,"SJAG_01928":null,"SJAG_02664":null,"SJAG_03619":null,"SJAG_04040":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04581":null,"SJAG_04696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575","GO:0000776"],"is_obsolete":false,"name":"Mis6-Sim4 complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"Mcm21","type":"related"},{"name":"Mis6 centromere subcomplex","type":"narrow"},{"name":"Mis6-Mal2-Sim4 centromere complex","type":"exact"},{"name":"Sim4 complex","type":"exact"}],"termid":"GO:0031511","terms_by_termid":{"GO:0031511":null}}


id: PBO:0045211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C5 beta","termid":"PBO:0045211"}


id: MOD:00481
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:106#C","OMSSA:130","URL:http://www.appliedbiosystems.com/products/productdetail.cfm?prod_id=153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Applied Biosystems cleavable ICAT(TM) heavy","synonyms":[{"name":"Applied Biosystems cleavable ICAT(TM) heavy","type":"related"},{"name":"ICAT-C:13C(9)","type":"related"},{"name":"icatheavy","type":"exact"}],"termid":"MOD:00481"}


id: PBO:0072492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 21","termid":"PBO:0072492"}


id: PBO:0034726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dcp2-Dcp1 mRNA-decapping complex subunit Edc1","termid":"PBO:0034726"}


id: MONDO:1011892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal intradural arachnoid cyst, non-human animal","secondary_identifiers":["OMIA:001923"],"termid":"MONDO:1011892","xrefs":{"Monarch":{"xref_id":"1011892"}}}


id: PBO:0077849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1","termid":"PBO:0077849"}


id: PBO:0030971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0030971"}


id: PBO:0063383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 2 like","termid":"PBO:0063383"}


id: PBO:0011114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-tyrosine ligase Pby1 (predicted)","termid":"PBO:0011114"}


id: PBO:0088086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX (ubiquitin regulatory X) domain-containing protein; interacts with Cdc48p; UBX7 has a paralog, UBX6, that arose from the whole genome duplication","termid":"PBO:0088086"}


id: PBO:0069084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 331, pseudogene","termid":"PBO:0069084"}


id: MONDO:0018931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucolipidosis III alpha/beta (MLIII alpha/beta) is a lysosomal disorder characterized by progressive slowing of the growth rate from early childhood, stiffness and pain in joints, gradual coarsening of facial features, moderate developmental delay and mild intellectual disability in most patients.","definition_xrefs":["Orphanet:423461","PMID:6461005"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"familial mucolipidosis","termid":"MONDO:0031422"},{"relation_name":"is_a","term_name":"GNPTAB-mucolipidosis","termid":"MONDO:0100122"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"mucolipidosis type III, alpha/beta","secondary_identifiers":["OMIM:252600","GARD:17704","DOID:0080071","SCTID:65764006","MEDGEN:10988","UMLS:C0033788","Orphanet:577","NORD:1624","NANDO:2200568","NANDO:1200125"],"synonyms":[{"name":"ML 3","type":"broad"},{"name":"ML 3 A","type":"related"},{"name":"ML 3 Alpha/Beta","type":"related"},{"name":"ML 3 alpha/beta","type":"exact"},{"name":"ML III alpha/beta","type":"exact"},{"name":"ML3","type":"broad"},{"name":"MLIII","type":"exact"},{"name":"Pseudo Hurler Polydystrophy","type":"exact"},{"name":"mucolipidosis 3","type":"broad"},{"name":"mucolipidosis 3 Alpha/Beta","type":"related"},{"name":"mucolipidosis 3 Alpha/Beta, atypical","type":"related"},{"name":"mucolipidosis 3A","type":"related"},{"name":"mucolipidosis III","type":"broad"},{"name":"mucolipidosis III ALPHA/BETA","type":"related"},{"name":"mucolipidosis type 3 alpha/beta","type":"exact"},{"name":"mucolipidosis type 3A","type":"related"},{"name":"mucolipidosis type III","type":"exact"},{"name":"mucolipidosis type III alpha/beta","type":"related"},{"name":"pseudo-Hurler polydystrophy","type":"exact"}],"termid":"MONDO:0018931","xrefs":{"Monarch":{"xref_id":"0018931"}}}


