# terms

id: FYPO:0004390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more arginine catabolism RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Arginine catabolism RNAs are transcribed from genes whose products are involved in arginine catabolism.","definition_xrefs":["PomBase:mah","PMID:23695302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of amino acid catabolism gene mRNA during vegetative growth","termid":"FYPO:0004389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased level of arginine catabolism gene mRNA during vegetative growth","synonyms":[{"name":"increased arginine catabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of arginine catabolism gene RNA during vegetative growth","type":"exact"},{"name":"increased level of arginine catabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of arginine catabolism gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0004390"}


id: PATO:0001336
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual whose sex is unknown.","definition_xrefs":["MGED:MGED"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001336 unknown sex (obsolete PATO:0001336)","termid":"PATO:0001336"}


id: PBO:0116684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 14 effector protein","termid":"PBO:0116684"}


id: PBO:0086743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possible role in iron metabolism and/or amino acid and carbohydrate metabolism; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0086743"}


id: MONDO:0021370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the minor salivary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of salivary gland","termid":"MONDO:0021357"},{"relation_name":"is_a","term_name":"mouth mucosa disorder","termid":"MONDO:0044992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of minor salivary gland","secondary_identifiers":["MEDGEN:138022","UMLS:C0345613","SCTID:126798006","NCIT:C4409"],"synonyms":[{"name":"minor salivary gland neoplasm","type":"exact"},{"name":"minor salivary gland neoplasm (disease)","type":"exact"},{"name":"minor salivary gland tumor","type":"exact"},{"name":"minor salivary gland tumour","type":"exact"},{"name":"neoplasm of minor salivary gland","type":"exact"},{"name":"neoplasm of the minor salivary gland","type":"exact"},{"name":"tumor of minor salivary gland","type":"exact"},{"name":"tumor of the minor salivary gland","type":"exact"},{"name":"tumour of minor salivary gland","type":"exact"},{"name":"tumour of the minor salivary gland","type":"exact"}],"termid":"MONDO:0021370","xrefs":{"Monarch":{"xref_id":"0021370"}}}


id: PBO:0083898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of thenuclear pore complex (NPC) permeability barrier; possible karyopherin release factor that accelerates release of karyopherin-cargo complexes after transport across NPC; both NUP1 and NUP60 are homologous to human NUP153","termid":"PBO:0083898"}


id: MONDO:0700225
data:
  {"annotated_genes":["SJAG_03363","SJAG_04277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012672"},{"annotations":[87182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010939"}]},"cv_name":"mondo","definition":"An instance of gallbladder disorder that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03363":null,"SJAG_04277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hereditary gallbladder disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:600803"],"termid":"MONDO:0700225","terms_by_termid":{"MONDO:0010939":null,"MONDO:0012672":null},"xrefs":{"Monarch":{"xref_id":"0700225"}}}


id: PATO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's occurring or existing at the same time or having the same period or phase.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synchronous","termid":"PATO:0000695"}


id: PBO:0062411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 38 pseudogene","termid":"PBO:0062411"}


id: PBO:0054414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1810","termid":"PBO:0054414"}


id: MONDO:0014471
data:
  {"annotated_genes":["SJAG_00133","SJAG_02564","SJAG_07003","SJAG_01503"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020727"},{"annotations":[88703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032869"},{"annotations":[86946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014091"},{"annotations":[87332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011421"},{"annotations":[88384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957254"},{"annotations":[88383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957255"}]},"cv_name":"mondo","definition":"A rare, genetic, mitochondrial oxidative phosphorylation disorder that may present with a wide range of symptoms (including muscular hypotonia, hypertrophic cardiomyopathy, psychomotor delay, encephalopathy, peripheral neuropathy, lactic acidosis, 3-methylglutaconic aciduria) and clinical syndromes (including NARP and MILS).","definition_xrefs":["Orphanet:254913"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete isolated oxidative phosphorylation complex disorder (obsolete MONDO:0016805)","termid":"MONDO:0016805"},{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_01503":null,"SJAG_02564":null,"SJAG_07003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111143","icd11.foundation:902255625","OMIMPS:604273","UMLS:C4757950","MEDGEN:1655626","GARD:18649"],"synonyms":[{"name":"isolated ATP synthase deficiency","type":"narrow"},{"name":"isolated mitochondrial respiratory chain complex V deficiency","type":"narrow"},{"name":"mitochondrial complex V (ATP synthase) deficiency","type":"exact"}],"termid":"MONDO:0014471","terms_by_termid":{"MONDO:0011421":null,"MONDO:0014091":null,"MONDO:0020727":null,"MONDO:0032869":null,"MONDO:0957254":null,"MONDO:0957255":null},"xrefs":{"Monarch":{"xref_id":"0014471"}}}


id: MONDO:0800063
data:
  {"annotated_genes":["SJAG_01071","SJAG_01776","SJAG_04183","SJAG_02237","SJAG_04586","SJAG_01076","SJAG_02246","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032684"},{"annotations":[88207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019407"},{"annotations":[89083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008872"},{"annotations":[87136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014031"},{"annotations":[88838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014991"},{"annotations":[88522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011715"},{"annotations":[88238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014350"},{"annotations":[86940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014686"}]},"cv_name":"mondo","definition":"A skeletal dysplsia characterized by primordial dwarfism, an extreme growth deficiency disorder that has its onset during embryonic development and persists throughout life and slender bone disorder, a heterogeneous group of neonatal dwarfism syndromes, usually of unknown etiology, associated with gracile (thin) bones, multiple fractures, and prenatal or early postnatal death.","definition_xrefs":["PMID:19006220","PMID:25490023","PMID:31633310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01071":null,"SJAG_01076":null,"SJAG_01776":null,"SJAG_02237":null,"SJAG_02246":null,"SJAG_02908":null,"SJAG_04183":null,"SJAG_04586":null},"genotype_count":0,"is_obsolete":false,"name":"primordial dwarfism and slender bone disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800063","terms_by_termid":{"MONDO:0008872":null,"MONDO:0011715":null,"MONDO:0014031":null,"MONDO:0014350":null,"MONDO:0014686":null,"MONDO:0014991":null,"MONDO:0019407":null,"MONDO:0032684":null},"xrefs":{"Monarch":{"xref_id":"0800063"}}}


id: MONDO:1010021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conotruncal heart malformations, non-human animal","termid":"MONDO:1010012"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, non-human animal","secondary_identifiers":["OMIA:000994"],"termid":"MONDO:1010021","xrefs":{"Monarch":{"xref_id":"1010021"}}}


id: GO:0060926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pacemaker cell over time, from its formation to the mature state. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell development","termid":"GO:0055013"},{"relation_name":"part_of","term_name":"cardiac pacemaker cell differentiation","termid":"GO:0060920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac pacemaker cell development","synonyms":[{"name":"pacemaker cell development","type":"broad"}],"termid":"GO:0060926"}


id: PBO:0063300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC-esterase domain containing 1A","termid":"PBO:0063300"}


id: GO:0047738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cellobiose + phosphate = alpha-D-glucose 1-phosphate + D-glucose.","definition_xrefs":["RHEA:19493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cellobiose phosphorylase activity","secondary_identifiers":["EC:2.4.1.20","MetaCyc:CELLOBIOSE-PHOSPHORYLASE-RXN"],"synonyms":[{"name":"cellobiose:phosphate alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0047738"}


id: SO:1000095
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000095 sequence_variant_causing_nonconservative_amino_acid_substitution (obsolete SO:1000095)","synonyms":[{"name":"mutation causing nonconservative amino acid substitution","type":"related"},{"name":"sequence variant causing nonconservative amino acid substitution","type":"exact"}],"termid":"SO:1000095"}


id: MONDO:1012787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuroaxonal dystrophy that occurs in dogs due to a mutation in the PLA2G6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"neuroaxonal dystrophy, dog","termid":"MONDO:1011561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy, PLA2G6-related, dog","secondary_identifiers":["OMIA:002105-9615"],"termid":"MONDO:1012787","xrefs":{"Monarch":{"xref_id":"1012787"}}}


id: PBO:0049013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6A","termid":"PBO:0049013"}


id: PBO:0087147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent ATPase; involved in pre-rRNA processing at sites A0, A1, and A2, and in control of cell cycle progression; contains two upstream open reading frames (uORFs) in 5' untranslated region which regulate translation","termid":"PBO:0087147"}


id: PBO:0068733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 4, pseudogene","termid":"PBO:0068733"}


id: GO:1904073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trophectodermal cell proliferation.","definition_xrefs":["PMID:24508636","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"trophectodermal cell proliferation","termid":"GO:0001834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trophectodermal cell proliferation","synonyms":[{"name":"regulation of trophectoderm cell proliferation","type":"exact"}],"termid":"GO:1904073"}


id: FYPO:0002804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuole organization is abnormal when the cell is subject to nitrogen starvation. Vacuole organization results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["GO:0007033","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole organization","termid":"FYPO:0002803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuole organization during nitrogen starvation","synonyms":[{"name":"abnormal vacuolar organisation during nitrogen starvation","type":"exact"},{"name":"abnormal vacuolar organization during nitrogen starvation","type":"exact"},{"name":"abnormal vacuole organisation during nitrogen starvation","type":"exact"},{"name":"abnormal vacuole organization during nitrogen depletion","type":"exact"},{"name":"abnormal vacuole organization during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002804"}


id: PBO:0108898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 11","termid":"PBO:0108898"}


id: PBO:0081483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 365","termid":"PBO:0081483"}


id: PBO:0017959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGI-48 family Utp18 (predicted)","termid":"PBO:0017959"}


id: GO:0047376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinyl palmitate + H2O = all-trans-retinol + H+ + palmitate.","definition_xrefs":["RHEA:13933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinyl-palmitate esterase activity","termid":"GO:0050253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"all-trans-retinyl-palmitate hydrolase, all-trans-retinol forming activity","secondary_identifiers":["Reactome:R-HSA-2404140","KEGG_REACTION:R02368","Reactome:R-HSA-2429643","MetaCyc:3.1.1.64-RXN"],"synonyms":[{"name":"all-trans-retinyl-palmitate acylhydrolase activity","type":"broad"},{"name":"all-trans-retinyl-palmitate hydrolase activity","type":"broad"},{"name":"retinyl-palmitate palmitohydrolase activity","type":"broad"}],"termid":"GO:0047376"}


id: PBO:0091093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2434 family conserved fungal multispanning membrane protein","termid":"PBO:0091093"}


id: PBO:0013818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein, implicted in mitochondrial ergosterol and phospholipd homeostasis","termid":"PBO:0013818"}


id: PBO:0056406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 4","termid":"PBO:0056406"}


id: PBO:0048592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone 1","termid":"PBO:0048592"}


id: PBO:0048798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha q pseudogene 1","termid":"PBO:0048798"}


id: PBO:0073503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 2","termid":"PBO:0073503"}


id: GO:0031890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"VIP receptor binding","type":"exact"},{"name":"vasoactive intestinal polypeptide receptor ligand","type":"narrow"}],"termid":"GO:0031890"}


id: MONDO:0018375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary avascular necrosis","termid":"MONDO:0018374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traumatic avascular necrosis","secondary_identifiers":["UMLS:C5680037","MEDGEN:1802844","Orphanet:399175","GARD:21660","icd11.foundation:822486319"],"synonyms":[{"name":"traumatic AVN","type":"exact"}],"termid":"MONDO:0018375","xrefs":{"Monarch":{"xref_id":"0018375"}}}


id: GO:1901133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of kanamycin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"kanamycin metabolic process","termid":"GO:1901131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"kanamycin biosynthetic process","synonyms":[{"name":"kanamycin anabolism","type":"exact"},{"name":"kanamycin biosynthesis","type":"exact"},{"name":"kanamycin formation","type":"exact"},{"name":"kanamycin synthesis","type":"exact"}],"termid":"GO:1901133"}


id: GO:0072027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the connecting tubule over time, from its formation to the mature structure. The connecting tubule is a tubular segment of the nephron; it connects the distal convoluted tubule to the collecting duct.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connecting tubule development","synonyms":[{"name":"connecting duct development","type":"exact"}],"termid":"GO:0072027"}


id: MONDO:0007392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coxoauricular syndrome is an extremely rare primary bone defect, described only in a mother and her three daughters to date, characterized by short stature, hip dislocation, minor vertebral and pelvic changes, and microtia with hearing loss. There have been no further descriptions in the literature since 1981.","definition_xrefs":["Orphanet:1508"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coxoauricular syndrome","secondary_identifiers":["MESH:C565148","OMIM:122780","icd11.foundation:649449912","SCTID:732248005","GARD:1558","MEDGEN:343827","UMLS:C1852513"],"synonyms":[{"name":"coxoauricular syndrome","type":"exact"}],"termid":"MONDO:0007392","xrefs":{"Monarch":{"xref_id":"0007392"}}}


id: GO:0046011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oskar mRNA translation. To ensure the localization of Oskar protein at the posterior pole of the oocyte, translation of oskar mRNA is repressed during its transport to the posterior pole and activated upon localization of the mRNA at the posterior cortex.","definition_xrefs":["GOC:go_curators","PMID:12538512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of oskar mRNA translation","termid":"GO:0046011"}


id: GO:0016032
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67049],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0075523"}]},"cv_name":"biological_process","definition":"A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.","definition_xrefs":["GOC:mah","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral process","references_by_uniquename":{"GO_REF:0000043":null},"secondary_identifiers":["GO:0022415","Reactome:R-HSA-162906","Wikipedia:Viral_life_cycle"],"synonyms":[{"name":"viral infection","type":"related"},{"name":"virulence","type":"related"},{"name":"virus process","type":"exact"}],"termid":"GO:0016032","terms_by_termid":{"GO:0075523":null}}


id: PBO:0116584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS16 antisense RNA 1","termid":"PBO:0116584"}


id: FYPO:0001073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of myo-inositol into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal myo-inositol import","synonyms":[{"name":"abnormal myo-inositol import across plasma membrane","type":"exact"},{"name":"abnormal myo-inositol import during mitotic cell cycle","type":"related"},{"name":"abnormal myo-inositol import during vegetative growth","type":"exact"},{"name":"abnormal myo-inositol import into cell","type":"exact"},{"name":"abnormal myo-inositol uptake","type":"exact"}],"termid":"FYPO:0001073"}


id: MOD:01650
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-valine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine removal","termid":"MOD:01650"}


id: GO:0102812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-coumaryl-CoA + cyanidin 3-O-beta-D-glucoside betaine = cyanidin 3-(p-coumaroyl)-glucoside + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-coumaroyl-CoA:cyanidin-3-O-beta-D-glucoside-6''-O-acyltransferase activity (obsolete GO:0102812)","termid":"GO:0102812"}


id: GO:0007348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that modulates the rate or extent of the progression through the syncytial blastoderm mitotic cell cycle.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"regulates","term_name":"syncytial blastoderm mitotic cell cycle","termid":"GO:0035186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of syncytial blastoderm mitotic cell cycle","synonyms":[{"name":"modulation of syncytial blastoderm cell cycle progression","type":"exact"},{"name":"regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"regulation of syncytial blastoderm cell cycle","type":"exact"},{"name":"regulation of syncytial blastoderm cell cycle progression","type":"exact"},{"name":"syncytial blastoderm cell cycle modulation","type":"exact"},{"name":"syncytial blastoderm cell cycle regulation","type":"exact"},{"name":"syncytial blastoderm cell cycle regulator","type":"related"}],"termid":"GO:0007348"}


id: PBO:0058811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7853","termid":"PBO:0058811"}


id: GO:1990341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homotrimeric or homopentameric glycoprotein that functions at the interface of the cell membrane and the extracellular matrix through its interactions with proteins and proteoglycans, such as collagens, integrins and fibronectin, to regulate matrix structure and cellular behaviour.","definition_xrefs":["PMID:18193164","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"thrombospondin complex","termid":"GO:1990341"}


id: PBO:0088764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical anchoring factor, pleckstrin homology domain","termid":"PBO:0088764"}


id: PBO:0003000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urea transporter (predicted)","termid":"PBO:0003000"}


id: GO:0080058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The protein modification process in which a glutathione molecule is removed from a protein amino acid by breaking a disulfide linkage.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglutathionylation","synonyms":[{"name":"protein amino acid deglutathionylation","type":"exact"}],"termid":"GO:0080058"}


id: GO:0033221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + urea(out) = ADP + phosphate + urea(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transmembrane transporter activity","termid":"GO:0015204"},{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled urea transmembrane transporter activity","secondary_identifiers":["RHEA:32803"],"synonyms":[{"name":"ATP-dependent urea transmembrane transporter activity","type":"exact"},{"name":"carbamide-transporting ATPase activity","type":"exact"},{"name":"urea-transporting ATPase activity","type":"exact"}],"termid":"GO:0033221"}


id: GO:0006846
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006847"}]},"cv_name":"biological_process","definition":"The directed movement of acetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"acetate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006846","terms_by_termid":{"GO:0006847":null}}


id: PBO:0017050
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae STE20","termid":"PBO:0017050"}


id: MONDO:0040964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete superimposed infection (obsolete MONDO:0040964)","secondary_identifiers":["SCTID:193198003"],"synonyms":[{"name":"superadded infection","type":"related"},{"name":"superimposed infection","type":"exact"},{"name":"suprainfection","type":"related"}],"termid":"MONDO:0040964","xrefs":{"Monarch":{"xref_id":"0040964"}}}


id: MONDO:0019482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dendritic cell sarcoma not otherwise specified (obsolete MONDO:0019482)","termid":"MONDO:0019482","xrefs":{"Monarch":{"xref_id":"0019482"}}}


id: PBO:0044787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 1","termid":"PBO:0044787"}


id: GO:1903663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-altrarate.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:17649980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"aldaric acid catabolic process","termid":"GO:0019579"},{"relation_name":"is_a","term_name":"L-altrarate metabolic process","termid":"GO:1903662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-altrarate catabolic process","synonyms":[{"name":"L-altrarate(1-) breakdown","type":"exact"},{"name":"L-altrarate(1-) catabolism","type":"exact"},{"name":"L-altrarate(1-) degradation","type":"exact"}],"termid":"GO:1903663"}


id: MONDO:0006896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the esophagus that is caused by the reflux of gastric juice with contents of the stomach and duodenum.","definition_xrefs":["MESH:D004942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagitis","termid":"MONDO:0001409"},{"relation_name":"is_a","term_name":"peptic ulcer disease","termid":"MONDO:0004247"},{"relation_name":"is_a","term_name":"esophageal ulcer","termid":"MONDO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"peptic esophagitis","secondary_identifiers":["ICD9:530.11","MEDGEN:5028","DOID:13976","EFO:1001095","SCTID:57643001","UMLS:C0014869"],"synonyms":[{"name":"peptic esophagitis","type":"exact"},{"name":"peptic reflux disease","type":"exact"},{"name":"reflux esophagitis","type":"exact"},{"name":"reflux oesophagitis","type":"exact"}],"termid":"MONDO:0006896","xrefs":{"Monarch":{"xref_id":"0006896"}}}


id: PBO:0062846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSTM1 antisense RNA 1","termid":"PBO:0062846"}


id: PBO:0045381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP3 pseudogene 2","termid":"PBO:0045381"}


id: PBO:0059709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 17","termid":"PBO:0059709"}


id: PBO:0031191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_thickness_during_vegetative_growth","termid":"PBO:0031191"}


id: PBO:0080482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 2","termid":"PBO:0080482"}


id: PBO:0051021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 1","termid":"PBO:0051021"}


id: PBO:0053615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 654","termid":"PBO:0053615"}


id: PBO:0070457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4","termid":"PBO:0070457"}


id: GO:0016031
data:
  {"annotated_genes":["SJAG_03358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80959],"is_not":false,"summary":null,"term":"GO:0016031"}]},"cv_name":"biological_process","definition":"The process in which a tRNA is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:11121736","GOC:ma","PMID:10988073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA import into mitochondrion","termid":"GO:0035927"},{"relation_name":"is_a","term_name":"tRNA transport","termid":"GO:0051031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"tRNA import into mitochondrion","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"cytoplasmic tRNA import into mitochondria","type":"exact"},{"name":"cytoplasmic tRNA import into mitochondrion","type":"narrow"},{"name":"cytoplasmic tRNA transport into mitochondrion","type":"exact"},{"name":"cytoplasmic tRNA, mitochondrial import","type":"exact"},{"name":"mitochondrial import of cytoplasmic tRNA","type":"narrow"},{"name":"nuclear-encoded tRNA import into mitochondrion","type":"narrow"}],"termid":"GO:0016031","terms_by_termid":{"GO:0016031":null}}


id: MONDO:0022145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Chiari malformation type II (obsolete MONDO:0022145)","termid":"MONDO:0022145","xrefs":{"Monarch":{"xref_id":"0022145"}}}


id: CHEBI:3312
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium dichloride","termid":"CHEBI:3312"}


id: MONDO:0850335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glioblastoma that is characterized by high cellularity, high mitotic activity, necrosis or microvascular proliferation and that lacks mutations in IDH genes.","definition_xrefs":["DOID:0080878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblastoma","termid":"MONDO:0018177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"IDH-wildtype glioblastoma","secondary_identifiers":["NCIT:C39750"],"termid":"MONDO:0850335","xrefs":{"Monarch":{"xref_id":"0850335"}}}


id: GO:0045720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of integrin biosynthetic process","synonyms":[{"name":"down regulation of integrin biosynthetic process","type":"exact"},{"name":"down-regulation of integrin biosynthetic process","type":"exact"},{"name":"downregulation of integrin biosynthetic process","type":"exact"},{"name":"inhibition of integrin biosynthetic process","type":"narrow"},{"name":"negative regulation of integrin anabolism","type":"exact"},{"name":"negative regulation of integrin biosynthesis","type":"exact"},{"name":"negative regulation of integrin formation","type":"exact"},{"name":"negative regulation of integrin synthesis","type":"exact"}],"termid":"GO:0045720"}


id: MONDO:0017174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Machado-Joseph disease type 1 is a rare, usually severe subtype of Machado-Joseph disease (SCA3/MJD) characterized by the presence of marked pyramidal and extrapyramidal signs.","definition_xrefs":["Orphanet:276238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Machado-Joseph disease","termid":"MONDO:0007182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Machado-Joseph disease type 1","secondary_identifiers":["SCTID:91953003","UMLS:C0751668","GARD:21048","MEDGEN:155610","icd11.foundation:1094680019"],"synonyms":[{"name":"SCA3, Joseph type","type":"exact"},{"name":"azorean disease, type i","type":"exact"},{"name":"spinocerebellar ataxia type 3, Joseph type","type":"exact"}],"termid":"MONDO:0017174","xrefs":{"Monarch":{"xref_id":"0017174"}}}


id: GO:0062083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class Ib molecule of the HLA-G subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["DOI:10.1002/9780470015902.a0024246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class Ib receptor activity","termid":"GO:0062080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"HLA-G specific inhibitory MHC class Ib receptor activity","termid":"GO:0062083"}


id: GO:1903525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane tubulation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:pm","PMID:18388313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"regulates","term_name":"plasma membrane tubulation","termid":"GO:0097320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of membrane tubulation","synonyms":[{"name":"regulation of plasma membrane tubulation","type":"exact"},{"name":"regulation of vesicle scission","type":"related"}],"termid":"GO:1903525"}


id: PBO:0062938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 3","termid":"PBO:0062938"}


id: PBO:0053287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 1","termid":"PBO:0053287"}


id: PBO:0063996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 30","termid":"PBO:0063996"}


id: GO:0071295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin","termid":"GO:0071295"}


id: GO:0099186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of synapse","termid":"GO:0098918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of postsynapse","termid":"GO:0099186"}


id: FYPO:0007751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prometaphase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"spindle collapse during meiotic prometaphase I","synonyms":[{"name":"broken meiotic spindle during prometaphase I","type":"related"},{"name":"meiosis I spindle collapse during prometaphase","type":"exact"},{"name":"meiotic spindle breakage during prometaphase I","type":"exact"},{"name":"meiotic spindle collapse during prometaphase I","type":"exact"},{"name":"spindle collapse during prometaphase I","type":"exact"},{"name":"spindle collapse during prometaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007751"}


id: GO:0090673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of an endothelial cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["PMID:19460962","GOC:BHF_miRNA","GOC:bc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"endothelial cell-matrix adhesion","termid":"GO:0090673"}


id: PR:O74348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21D10.08c gene.","definition_xrefs":["UniProtKB:O74348","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21D10.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.08c","synonyms":[{"name":"Spom972h-SPBC21D10.08c","type":"exact"}],"termid":"PR:O74348"}


id: PBO:0062678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily K member 1","termid":"PBO:0062678"}


id: PR:Q9Y7Y5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtt109 gene.","definition_xrefs":["UniProtKB:Q9Y7Y5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase rtt109 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.06c","synonyms":[{"name":"Spom972h-rtt109","type":"exact"}],"termid":"PR:Q9Y7Y5"}


id: GO:0021809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Signaling between members of the neurotrophin family and their receptors that result in the start of cell motility as a component of the process of cerebral cortex glial-mediated radial migration.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","PMID:12626695"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophic factor signaling initiating cell movement, involved in cerebral cortex radial glia guided migration (obsolete GO:0021809)","synonyms":[{"name":"neurotrophic factor signalling initiating cell movement, involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021809"}


id: PBO:0048516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial cell derived neurotrophic factor","termid":"PBO:0048516"}


id: PBO:0090286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein, lipocalin superfamily Svf1","termid":"PBO:0090286"}


id: GO:0070212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of multiple ADP-ribose residues from NAD to a protein amino acid, forming a poly(ADP-ribose) chain.","definition_xrefs":["GOC:rl","PMID:25043379","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein poly-ADP-ribosylation","synonyms":[{"name":"addition of poly-ADP-ribose to protein","type":"exact"},{"name":"poly(ADP-ribose) addition to protein","type":"exact"},{"name":"protein amino acid poly-ADP-ribosylation","type":"exact"},{"name":"protein poly(ADP-ribose) metabolism","type":"related"},{"name":"protein poly(ADP-ribose) synthesis","type":"exact"}],"termid":"GO:0070212"}


id: PBO:0041584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 42","termid":"PBO:0041584"}


id: PBO:0003975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex subunit Sfc6","termid":"PBO:0003975"}


id: PATO:0000565
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000565 volume value (obsolete PATO:0000565)","termid":"PATO:0000565"}


id: PBO:0061058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase 1","termid":"PBO:0061058"}


id: MONDO:0011083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trichodental syndrome is characterized by the association of fine, dry and short hair with dental anomalies. It has been described in less than 10 families. The mode of transmission is autosomal dominant.","definition_xrefs":["Orphanet:3351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichodental syndrome","secondary_identifiers":["icd11.foundation:944650339","OMIM:601453","MEDGEN:96068","SCTID:277810000","UMLS:C0406724","MESH:C536551","GARD:265"],"synonyms":[{"name":"TRICHODENTAL dysplasia","type":"related"},{"name":"Tricho-dental dysplasia","type":"related"},{"name":"Tricho-dental syndrome","type":"related"},{"name":"kersey syndrome","type":"exact"}],"termid":"MONDO:0011083","xrefs":{"Monarch":{"xref_id":"0011083"}}}


id: GO:0030222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specializes features of an eosinophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte differentiation","termid":"GO:0030851"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil differentiation","secondary_identifiers":["GO:0035856"],"synonyms":[{"name":"eosinophil cell development","type":"related"},{"name":"eosinophil cell differentiation","type":"exact"},{"name":"eosinophil development","type":"related"}],"termid":"GO:0030222"}


id: PR:Q09900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3802 gene.","definition_xrefs":["UniProtKB:Q09900","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L38-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.12","synonyms":[{"name":"Spom972h-rpl3802","type":"exact"}],"termid":"PR:Q09900"}


id: PBO:0065654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type E","termid":"PBO:0065654"}


id: PBO:0040495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A and ninein interacting protein","termid":"PBO:0040495"}


id: MONDO:0019076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Circumscribed palmoplantar hypokeratosis is an ectodermal dysplasia characterized by circular, well-circumscribed patches of erythematous depressed skin.","definition_xrefs":["Orphanet:69744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"circumscribed palmoplantar hypokeratosis","secondary_identifiers":["UMLS:C0406762","MEDGEN:590662","GARD:18898"],"termid":"MONDO:0019076","xrefs":{"Monarch":{"xref_id":"0019076"}}}


id: GO:0002658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peripheral tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"regulates","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peripheral tolerance induction","termid":"GO:0002658"}


id: PBO:0073976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 23 member 1","termid":"PBO:0073976"}


id: PBO:0069125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 375, pseudogene","termid":"PBO:0069125"}


id: PBO:0017821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain protein Man1, Sad1 interacting factor","termid":"PBO:0017821"}


id: PR:O13730
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A muskelin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15526:SF5","OMA:SCHPO01545","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei4-dependent protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.10","secondary_identifiers":["UniProtKB:O13730"],"synonyms":[{"name":"Spom972h-MKLN1","type":"exact"}],"termid":"PR:O13730"}


id: PBO:0060428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic acid binding protein 1","termid":"PBO:0060428"}


id: GO:0005217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific intracellular ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"intracellularly ligand-gated monoatomic ion channel activity","synonyms":[{"name":"intracellular ligand-gated ion channel activity","type":"broad"},{"name":"intracellular ligand-gated monoatomic ion channel activity","type":"exact"}],"termid":"GO:0005217"}


id: PBO:0046147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIPR1 intronic transcript 1","termid":"PBO:0046147"}


id: GO:0034562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,2-bis(4-hydroxyphenyl)-1-propanol + NADH + H+ + O2 = 2,3-bis(4-hydroxyphenyl)-1,2-propanediol + NAD+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,2-bis(4-hydroxyphenyl)-1-propanol hydroxylase activity (obsolete GO:0034562)","termid":"GO:0034562"}


id: PBO:0027079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_plasma_membrane","termid":"PBO:0027079"}


id: GO:0062055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A regulation of the phtosynthetic light reaction in which the light harvesting antenna complexes transition between photosystems.","definition_xrefs":["PMID:29967049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthetic state transition","termid":"GO:0062055"}


id: PBO:0091441
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not appear to be the ortholog of S. cerevisiae CYB2, missing the N-term cytochrome B2 domain","termid":"PBO:0091441"}


id: MONDO:1011181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis, non-human animal","termid":"MONDO:1010300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis, cattle","secondary_identifiers":["OMIA:000755-9913"],"termid":"MONDO:1011181","xrefs":{"Monarch":{"xref_id":"1011181"}}}


id: PBO:0061740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 3","termid":"PBO:0061740"}


id: PBO:0054072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1422","termid":"PBO:0054072"}


id: GO:0043408
data:
  {"annotated_genes":["SJAG_04666","SJAG_06622","SJAG_02233","SJAG_02945","SJAG_06621","SJAG_01587","SJAG_00610","SJAG_04522","SJAG_03453","SJAG_03185","SJAG_01787","SJAG_01114","SJAG_00845","SJAG_04825","SJAG_02000","SJAG_03969","SJAG_01978","SJAG_02486","SJAG_03893","SJAG_00318","SJAG_06592","SJAG_00781","SJAG_02183","SJAG_00424","SJAG_05000","SJAG_00975","SJAG_02013","SJAG_01199","SJAG_03828","SJAG_02135","SJAG_02878","SJAG_02392","SJAG_01885","SJAG_03263","SJAG_00027","SJAG_03705","SJAG_03903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76501,82242],"is_not":false,"summary":null,"term":"GO:0043408"},{"annotations":[101337,108993,109563,105724,120346,97732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[90039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[96914,93522,120347,119090,101339,97854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[109087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[69405,89914,92615,94278,119920,91280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[110908,120310,110910,110911,110905,110909,114469,110907,119382,113803,110906,97140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[105625,89976,92696,116624,117592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAP kinase (MAPK) cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_00975":null,"SJAG_01114":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01787":null,"SJAG_01885":null,"SJAG_01978":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_02486":null,"SJAG_02878":null,"SJAG_02945":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03453":null,"SJAG_03705":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_03969":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of MAP kinase cascade","type":"exact"},{"name":"regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"regulation of MAPKKK cascade","type":"exact"},{"name":"regulation of mitogen activated protein kinase cascade","type":"exact"},{"name":"regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"}],"termid":"GO:0043408","terms_by_termid":{"GO:0043408":null,"GO:0043409":null,"GO:0062038":null,"GO:0180040":null,"GO:1900745":null,"GO:1903138":null,"GO:1903139":null,"GO:1903753":null}}


id: PBO:0091981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic spindle pole body protein Dms1","termid":"PBO:0091981"}


id: PBO:0074599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 10B","termid":"PBO:0074599"}


id: MONDO:0011144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition that affects the nervous system. Signs and symptoms of the condition generally develop between ages 18 months and 8 years, although later onset cases have been reported. Affected people may experience loss of muscle coordination (ataxia), seizures that do not respond to medications, muscle twitches (myoclonus), visual impairment, and developmental regression (loss of previously acquired skills). It occurs predominantly in people of Portuguese, Indian, Pakistani, or Czech ancestry. CLN6-NCL is caused by changes (mutations) in the CLN6 gene and is inherited in an autosomal recessive manner. Treatment options are limited to therapies that can help relieve some of the symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"ceroid lipofuscinosis, neuronal, 6B (Kufs type)","termid":"MONDO:0008768"},{"relation_name":"is_a","term_name":"late infantile neuronal ceroid lipofuscinosis","termid":"MONDO:0015674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0002561","MONDO:0005559","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"ceroid lipofuscinosis, neuronal, 6A","secondary_identifiers":["GARD:1224","MESH:C566627","OMIM:601780","Orphanet:228363","MEDGEN:1790423","UMLS:C5551375","DOID:0110729"],"synonyms":[{"name":"CLN6","type":"exact"},{"name":"CLN6 disease","type":"related"},{"name":"CLN6 disease, adult Kufs type A (subtype)","type":"related"},{"name":"CLN6 disease, late infantile (subtype)","type":"related"},{"name":"CLN6 late infantile neuronal ceroid lipofuscinosis","type":"exact"},{"name":"CLN6A","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 6","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, 6, variable age at onset","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, type 6","type":"exact"},{"name":"late infantile neuronal ceroid lipofuscinosis caused by mutation in CLN6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 6 variable age of onset","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, Gypsy/Indian early juvenile variant","type":"related"},{"name":"neuronal ceroid lipofuscinosis, late infantile, variant","type":"exact"},{"name":"vLINCL","type":"exact"}],"termid":"MONDO:0011144","xrefs":{"Monarch":{"xref_id":"0011144"}}}


id: PBO:0029695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubules_absent_from_cell","termid":"PBO:0029695"}


id: PBO:0039007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFF2 intronic transcript 1","termid":"PBO:0039007"}


id: GO:0030458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (mating sensu Fungi) (obsolete GO:0030458)","synonyms":[{"name":"activation of MAPKKK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030458"}


id: GO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac atrium over time, from its formation to the mature structure. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac atrium development","termid":"GO:0003230"}


id: GO:0071676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"negatively_regulates","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mononuclear cell migration","synonyms":[{"name":"down regulation of mononuclear cell migration","type":"exact"},{"name":"down-regulation of mononuclear cell migration","type":"exact"},{"name":"downregulation of mononuclear cell migration","type":"exact"},{"name":"inhibition of mononuclear cell migration","type":"narrow"}],"termid":"GO:0071676"}


id: GO:0141073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts opsonization by the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18068388","PMID:18941224","PMID:2307127","PMID:28860090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host opsonization","synonyms":[{"name":"disruption by symbiont of host opsonization","type":"exact"}],"termid":"GO:0141073"}


id: PBO:0004741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siva family protein (predicted)","termid":"PBO:0004741"}


id: PATO:0001702
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of violet hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"violet","termid":"PATO:0001424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated violet","synonyms":[{"name":"bright violet","type":"related"}],"termid":"PATO:0001702"}


id: FYECO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cobalt chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CoCl2","synonyms":[{"name":"+ cobalt chloride","type":"exact"}],"termid":"FYECO:0000311"}


id: PBO:0079642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 13","termid":"PBO:0079642"}


id: GO:0102039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a hydroperoxide + H+ + NADH = an alcohol + H2O + NAD+.","definition_xrefs":["GOC:pz","PMID:12517450","RHEA:62628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxiredoxin activity","termid":"GO:0051920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0051920"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0051920","GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"NADH-dependent peroxiredoxin activity","secondary_identifiers":["Reactome:R-HSA-1222526","EC:1.11.1.26","MetaCyc:R4-RXN"],"synonyms":[{"name":"alkylhydroperoxide reductase activity","type":"exact"}],"termid":"GO:0102039"}


id: PBO:0072056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 26","termid":"PBO:0072056"}


id: MONDO:0007776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hypersensitivity pneumonitis that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypersensitivity pneumonitis, familial","secondary_identifiers":["MESH:C536846","OMIM:145300","GARD:8240","MEDGEN:326724","UMLS:C1840386"],"synonyms":[{"name":"hereditary hypersensitivity pneumonitis","type":"exact"},{"name":"hypersensitivity pneumonitis, familial","type":"exact"}],"termid":"MONDO:0007776","xrefs":{"Monarch":{"xref_id":"0007776"}}}


id: MONDO:0018833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare idiopathic macular telangiectasia (obsolete MONDO:0018833)","secondary_identifiers":["Orphanet:482092"],"termid":"MONDO:0018833","xrefs":{"Monarch":{"xref_id":"0018833"}}}


id: GO:0044417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a molecule(s) produced by an organism to a location inside its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc","PMID:18406478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"translocation of molecules into host","secondary_identifiers":["GO:0051836"],"synonyms":[{"name":"translocation of molecules into other organism during symbiotic interaction","type":"broad"},{"name":"translocation of molecules into other organism involved in symbiotic interaction","type":"broad"},{"name":"transport of molecules into host","type":"exact"},{"name":"transport of molecules into other organism during symbiotic interaction","type":"broad"}],"termid":"GO:0044417"}


id: PBO:0041172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruton tyrosine kinase","termid":"PBO:0041172"}


id: MONDO:0009848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dissecting cellulitis of the scalp is a rare chronic suppurative dermatosis of the scalp that mainly affects black men and that is characterized by multiple painful inflammatory follicular and perifollicular nodules, pustules, and abscesses that interconnect via sinus tracts and eventually result in scarring alopecia.","definition_xrefs":["Orphanet:345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissecting cellulitis of the scalp","secondary_identifiers":["GARD:1883","MedDRA:10056961","MEDGEN:78097","UMLS:C0263506","MESH:C562486","icd11.foundation:872245808","SCTID:77333008","OMIM:260910","ICD9:704.8"],"synonyms":[{"name":"dissecting cellulitis of the scalp","type":"exact"},{"name":"perifolliculitis capitis ABSCEDENS ET SUFFODIENS, familial","type":"related"}],"termid":"MONDO:0009848","xrefs":{"Monarch":{"xref_id":"0009848"}}}


id: SO:0001823
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe increase in cds length that inserts one or more codons into the coding sequence between existing codons.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_insertion","termid":"SO:0001821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conservative_inframe_insertion","synonyms":[{"name":"conservative increase in CDS length","type":"exact"},{"name":"conservative inframe insertion","type":"exact"}],"termid":"SO:0001823"}


id: PATO:0000615
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally anterior structures.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterioralized","termid":"PATO:0000615"}


id: PBO:0109466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDAH family member 2, ADMA-independent","termid":"PBO:0109466"}


id: GO:0042467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell or organism in response to a stimulus in which the speed or frequency of movement is increased or decreased.","definition_xrefs":["PMID:8207088","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesis","termid":"GO:0042465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"orthokinesis","termid":"GO:0042467"}


id: GO:0015479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete outer membrane exporter porin (obsolete GO:0015479)","synonyms":[{"name":"outer membrane exporter porin","type":"exact"}],"termid":"GO:0015479"}


id: PBO:0067002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 6, pseudogene","termid":"PBO:0067002"}


id: GO:0016814
data:
  {"annotated_genes":["SJAG_04380","SJAG_04156","SJAG_03771","SJAG_00106","SJAG_01673","SJAG_04681","SJAG_04711","SJAG_02400","SJAG_04123","SJAG_03275","SJAG_01997","SJAG_04189","SJAG_01054","SJAG_00376"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003876"},{"annotations":[71572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004126"},{"annotations":[71663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004132"},{"annotations":[119185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008835"},{"annotations":[71639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003934"},{"annotations":[60598,58926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003935"},{"annotations":[80849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008892"},{"annotations":[71676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003937"},{"annotations":[78372,77485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004477"},{"annotations":[60401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004635"},{"annotations":[75587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[73391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2.","definition_xrefs":["EC:3.5.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00376":null,"SJAG_01054":null,"SJAG_01673":null,"SJAG_01997":null,"SJAG_02400":null,"SJAG_03275":null,"SJAG_03771":null,"SJAG_04123":null,"SJAG_04156":null,"SJAG_04189":null,"SJAG_04380":null,"SJAG_04681":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016814","terms_by_termid":{"GO:0003876":null,"GO:0003934":null,"GO:0003935":null,"GO:0003937":null,"GO:0004126":null,"GO:0004132":null,"GO:0004477":null,"GO:0004635":null,"GO:0008835":null,"GO:0008892":null,"GO:0043829":null,"GO:0052717":null}}


id: PBO:0080722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT1 transcription factor","termid":"PBO:0080722"}


id: PBO:0002483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Arp42","termid":"PBO:0002483"}


id: SO:1000065
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, because the number of nucleotides inserted or deleted is not a multiple of three.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000065 frameshift_sequence_variation (obsolete SO:1000065)","secondary_identifiers":["http://en.wikipedia.org/wiki/Frameshift_mutation"],"synonyms":[{"name":"frameshift mutation","type":"exact"},{"name":"frameshift sequence variation","type":"related"},{"name":"out of frame mutation","type":"related"}],"termid":"SO:1000065"}


id: SO:1000134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000134 sequence_variant_causing_polypeptide_fusion (obsolete SO:1000134)","synonyms":[{"name":"mutation causing polypeptide fusion","type":"related"},{"name":"sequence variant causing polypeptide fusion","type":"exact"}],"termid":"SO:1000134"}


id: GO:0048814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendrite morphogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of dendrite development","termid":"GO:0050773"},{"relation_name":"regulates","term_name":"dendrite morphogenesis","termid":"GO:0048813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendrite morphogenesis","termid":"GO:0048814"}


id: PBO:0078878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 1","termid":"PBO:0078878"}


id: GO:0002725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of T cell cytokine production","termid":"GO:0002724"},{"relation_name":"negatively_regulates","term_name":"T cell cytokine production","termid":"GO:0002369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell cytokine production","synonyms":[{"name":"down regulation of T cell cytokine production","type":"exact"},{"name":"down-regulation of T cell cytokine production","type":"exact"},{"name":"downregulation of T cell cytokine production","type":"exact"},{"name":"inhibition of T cell cytokine production","type":"narrow"},{"name":"negative regulation of T lymphocyte cytokine production","type":"exact"},{"name":"negative regulation of T-cell cytokine production","type":"exact"},{"name":"negative regulation of T-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002725"}


id: PBO:0056627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 8","termid":"PBO:0056627"}


id: PBO:0082179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase activating protein (ARF GAP); involved in ER-Golgi transport; shares functional similarity with Gcs1p","termid":"PBO:0082179"}


id: GO:0180001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cyclic di-AMP nucleotide.","definition_xrefs":["PMID:32843560","PMID:36629470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"},{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cyclic-di-AMP binding","synonyms":[{"name":"cyclic dimeric adenosine monophosphate binding","type":"exact"}],"termid":"GO:0180001"}


id: GO:0045888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription of homeotic genes of the Polycomb group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription of homeotic gene (Polycomb group) (obsolete GO:0045888)","synonyms":[{"name":"regulation of transcription of homeotic gene (Polycomb group)","type":"exact"}],"termid":"GO:0045888"}


id: GO:0140236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the presynapse.","definition_xrefs":["PMID:27321671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at synapse","termid":"GO:0140241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translation at presynapse","termid":"GO:0140236"}


id: PBO:0089901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytochrome C oxidase assembly protein Mss51","termid":"PBO:0089901"}


id: MONDO:0013158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive muscular dystrophy caused by mutations in the LARGE gene. It is associated with characteristic brain and eye malformations, profound mental retardation, and death usually in the first years of life.","definition_xrefs":["NCIT:C126743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A6","secondary_identifiers":["DOID:0111242","UMLS:C3150414","MEDGEN:461764","OMIM:613154","GARD:15626"],"synonyms":[{"name":"MDDGA6","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, large-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies) type A, 6","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 6","type":"related"}],"termid":"MONDO:0013158","xrefs":{"Monarch":{"xref_id":"0013158"}}}


id: PBO:0045165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal intermediate chain 7","termid":"PBO:0045165"}


id: PBO:0060860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA-related kinase 4 pseudogene 2","termid":"PBO:0060860"}


id: PBO:0066679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLIG1 pseudogene 1","termid":"PBO:0066679"}


id: GO:0050669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving homocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sulfur amino acid metabolic process","termid":"GO:0031336"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"regulation of homocysteine metabolic process","termid":"GO:0050666"},{"relation_name":"negatively_regulates","term_name":"homocysteine metabolic process","termid":"GO:0050667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of homocysteine metabolic process","synonyms":[{"name":"down regulation of homocysteine metabolic process","type":"exact"},{"name":"down-regulation of homocysteine metabolic process","type":"exact"},{"name":"downregulation of homocysteine metabolic process","type":"exact"},{"name":"inhibition of homocysteine metabolic process","type":"narrow"},{"name":"negative regulation of Hcy metabolic process","type":"exact"},{"name":"negative regulation of Hcy metabolism","type":"exact"},{"name":"negative regulation of homocysteine metabolism","type":"exact"}],"termid":"GO:0050669"}


id: PBO:0084898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation release factor; involved in stop codon recognition and hydrolysis of the peptidyl-tRNA bond during mitochondrial translation; lack of MRF1 causes mitochondrial genome instability","termid":"PBO:0084898"}


id: PBO:0087768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of tRNA-specific adenosine-34 deaminase; forms a heterodimer with Tad2p that converts adenosine to inosine at the wobble position of several tRNAs","termid":"PBO:0087768"}


id: PBO:0058582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715b","termid":"PBO:0058582"}


id: PBO:0029160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sensitivity_to_chemical","termid":"PBO:0029160"}


id: MONDO:0859764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis/schwannomatosis","termid":"MONDO:0859008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic NF2-related schwannomatosis","secondary_identifiers":["Orphanet:634475","MEDGEN:1843426","UMLS:C5816778"],"termid":"MONDO:0859764","xrefs":{"Monarch":{"xref_id":"0859764"}}}


id: MONDO:0009291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogen debranching enzyme (GDE) deficiency, or glycogen storage disease type 3 (GSD 3), is a form of glycogen storage disease characterized by severe muscle weakness and hepatopathy.","definition_xrefs":["Orphanet:366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease III","secondary_identifiers":["MESH:D006010","NANDO:1200826","OMIM:232400","UMLS:C0017922","SCTID:66937008","DOID:2748","MedDRA:10053250","MEDGEN:6641","NANDO:1201019","NANDO:1200844","NANDO:2200539","NCIT:C84736","GARD:9442"],"synonyms":[{"name":"AGL glycogen storage disease","type":"exact"},{"name":"Agl deficiency","type":"related"},{"name":"Cori disease","type":"exact"},{"name":"Cori-Forbes disease","type":"exact"},{"name":"Forbes disease","type":"exact"},{"name":"GDE deficiency","type":"exact"},{"name":"GSD due to glycogen debranching enzyme deficiency","type":"exact"},{"name":"GSD type 3","type":"exact"},{"name":"GSD3","type":"related"},{"name":"GSDIII","type":"exact"},{"name":"Gde deficiency","type":"related"},{"name":"amylo 1,6 glucosidase deficiency","type":"exact"},{"name":"amylo-1,6-glucosidase deficiency","type":"exact"},{"name":"deficiency of debranching enzyme","type":"exact"},{"name":"deficiency of dextrin","type":"exact"},{"name":"glycogen Debrancher deficiency","type":"related"},{"name":"glycogen storage disease 3","type":"related"},{"name":"glycogen storage disease III","type":"exact"},{"name":"glycogen storage disease IIIC","type":"related"},{"name":"glycogen storage disease IIID","type":"related"},{"name":"glycogen storage disease IIIa","type":"related"},{"name":"glycogen storage disease IIIb","type":"related"},{"name":"glycogen storage disease caused by mutation in AGL","type":"exact"},{"name":"glycogen storage disease due to glycogen debranching enzyme deficiency","type":"related"},{"name":"glycogen storage disease type 3","type":"exact"},{"name":"glycogen storage disease type III","type":"exact"},{"name":"glycogen storage disease, type III","type":"exact"},{"name":"glycogenosis due to glycogen debranching enzyme deficiency","type":"exact"},{"name":"glycogenosis type 3","type":"exact"},{"name":"glycogenosis type III","type":"exact"},{"name":"limit dextrinosis","type":"exact"}],"termid":"MONDO:0009291","xrefs":{"Monarch":{"xref_id":"0009291"}}}


id: MONDO:0005382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of bone that initially results in the excessive resorption of bone (by osteoclasts) followed by the replacement of normal bone marrow with vascular and fibrous tissue.","definition_xrefs":["NCIT:C3292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"metabolic bone disorder","termid":"MONDO:0800486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone Paget disease","secondary_identifiers":["MEDGEN:10493","OMIMPS:167250","SCTID:2089002","DOID:5408","Orphanet:280110","UMLS:C0029401","EFO:0004261"],"synonyms":[{"name":"Paget disease of bone","type":"exact"},{"name":"Paget's bone disease","type":"exact"},{"name":"Paget's disease","type":"related"},{"name":"Paget's disease of bone","type":"exact"},{"name":"Paget's disease of the bone","type":"exact"},{"name":"Pagets disease (bone)","type":"exact"},{"name":"bone Paget disease","type":"exact"},{"name":"bone Paget's disease","type":"exact"},{"name":"familial Paget's disease of bone","type":"related"},{"name":"osseous Paget's disease","type":"exact"},{"name":"osteitis deformans","type":"exact"}],"termid":"MONDO:0005382","xrefs":{"Monarch":{"xref_id":"0005382"}}}


id: PBO:0061490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor interacting protein 3","termid":"PBO:0061490"}


id: PBO:0048564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated, gamma adaptin ear containing, ARF binding protein 2","termid":"PBO:0048564"}


id: PBO:0005085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin involved in translation initiation (predicted)","termid":"PBO:0005085"}


id: PBO:0053394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 323","termid":"PBO:0053394"}


id: GO:0034399
data:
  {"annotated_genes":["SJAG_00471","SJAG_04366","SJAG_04539","SJAG_04017","SJAG_04140","SJAG_04284","SJAG_01013","SJAG_03959","SJAG_02495","SJAG_02424","SJAG_00054","SJAG_03449","SJAG_01745","SJAG_02210","SJAG_01374","SJAG_00886","SJAG_03638","SJAG_01358","SJAG_01330","SJAG_02998","SJAG_03662","SJAG_00840","SJAG_01662","SJAG_03103","SJAG_04306","SJAG_00939","SJAG_02214","SJAG_03182","SJAG_00962","SJAG_02248","SJAG_01203","SJAG_04379","SJAG_04411","SJAG_03413","SJAG_04010","SJAG_02164","SJAG_01083","SJAG_04645","SJAG_03689","SJAG_01185","SJAG_04477","SJAG_02186","SJAG_02299","SJAG_02900","SJAG_01777","SJAG_03593","SJAG_04400","SJAG_00968","SJAG_03847","SJAG_02341","SJAG_01909","SJAG_04148","SJAG_03299","SJAG_03321","SJAG_02274"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61946,62131,64007,72010,75750,77857,79658,90843,91257,91603,92266,92794,92930,93575,93784,95027,95259,95293,95847,96854,97638,98284,99685,101732,101733,102634,103801,105297,105522,105863,106275,107317,108076,108101,108262,109214,110074,110427,110655,111827,111932,112302,112397,113125,113172,115021,116456,116741,116890,117514,117829,117981,118040,118461,119430],"is_not":false,"summary":null,"term":"GO:0034399"}]},"cv_name":"cellular_component","definition":"The portion of the nuclear lumen proximal to the inner nuclear membrane.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear lumen","termid":"GO:0031981"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00471":null,"SJAG_00840":null,"SJAG_00886":null,"SJAG_00939":null,"SJAG_00962":null,"SJAG_00968":null,"SJAG_01013":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01203":null,"SJAG_01330":null,"SJAG_01358":null,"SJAG_01374":null,"SJAG_01662":null,"SJAG_01745":null,"SJAG_01777":null,"SJAG_01909":null,"SJAG_02164":null,"SJAG_02186":null,"SJAG_02210":null,"SJAG_02214":null,"SJAG_02248":null,"SJAG_02274":null,"SJAG_02299":null,"SJAG_02341":null,"SJAG_02424":null,"SJAG_02495":null,"SJAG_02900":null,"SJAG_02998":null,"SJAG_03103":null,"SJAG_03182":null,"SJAG_03299":null,"SJAG_03321":null,"SJAG_03413":null,"SJAG_03449":null,"SJAG_03593":null,"SJAG_03638":null,"SJAG_03662":null,"SJAG_03689":null,"SJAG_03847":null,"SJAG_03959":null,"SJAG_04010":null,"SJAG_04017":null,"SJAG_04140":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04306":null,"SJAG_04366":null,"SJAG_04379":null,"SJAG_04400":null,"SJAG_04411":null,"SJAG_04477":null,"SJAG_04539":null,"SJAG_04645":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0034399","terms_by_termid":{"GO:0034399":null}}


id: PBO:0080092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 54","termid":"PBO:0080092"}


id: GO:0004175
data:
  {"annotated_genes":["SJAG_00573","SJAG_00808","SJAG_01004","SJAG_04229","SJAG_00135","SJAG_03672","SJAG_02260","SJAG_03292","SJAG_03393","SJAG_16454","SJAG_01136","SJAG_02432","SJAG_03686","SJAG_03261","SJAG_04583","SJAG_01014","SJAG_01816","SJAG_03648","SJAG_02502","SJAG_04357","SJAG_02214","SJAG_02542","SJAG_04533","SJAG_04969","SJAG_04785","SJAG_02809","SJAG_05316","SJAG_03396","SJAG_03910","SJAG_00254","SJAG_05351","SJAG_01838","SJAG_03420","SJAG_02397","SJAG_00778","SJAG_04928","SJAG_04888","SJAG_05286","SJAG_01283","SJAG_00109","SJAG_04641","SJAG_00406","SJAG_01968","SJAG_04514","SJAG_00784","SJAG_03151","SJAG_00737","SJAG_04541","SJAG_04306","SJAG_03763","SJAG_01285","SJAG_01430","SJAG_00730","SJAG_00984","SJAG_03121","SJAG_03258","SJAG_02562","SJAG_01179","SJAG_00128","SJAG_04398","SJAG_01321"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57317,64267,90349,95213,98118,98359,101655,103805,113139,113379,116643,117578,119850],"is_not":false,"summary":null,"term":"GO:0004175"},{"annotations":[77826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042500"},{"annotations":[73604,70901,74941,77733,60612,71564,81715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004190"},{"annotations":[75938,78806,72506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004197"},{"annotations":[77134,89260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003923"},{"annotations":[76678,110035,79424,77659,99218,79094,71835,78663,71412,111167,68511,60456,71593,79915,100202,79985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004222"},{"annotations":[66524,70888,62482,77251,79184,66909,69335,68472,76577,77873,81082,76179,62738,75903,81405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[76651,108081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"},{"annotations":[57258,61833,62327,76094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004298"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.","direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase 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id: MONDO:0014409
data:
  {"annotated_genes":["SJAG_01536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88121],"is_not":false,"summary":null,"term":"MONDO:0014409"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the METTL23 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 44","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22566","UMLS:C4014745","MEDGEN:863182","DOID:0081208","OMIM:615942"],"synonyms":[{"name":"METTL23 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT44","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in METTL23","type":"exact"},{"name":"intellectual disability, autosomal recessive 44","type":"exact"},{"name":"intellectual disability, autosomal recessive type 44","type":"exact"},{"name":"mental retardation, autosomal recessive 44","type":"related"},{"name":"mental retardation, autosomal recessive type 44","type":"exact"}],"termid":"MONDO:0014409","terms_by_termid":{"MONDO:0014409":null},"xrefs":{"Monarch":{"xref_id":"0014409"}}}


id: MONDO:0060765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polypoid lesion composed of fibrous tissue and epithelium. Representative examples include skin tag, anal fibroepithelial polyp, and gingival fibroepithelial polyp.","definition_xrefs":["NCIT:C3337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroepithelial polyp","secondary_identifiers":["MEDGEN:1849971","UMLS:C5848070"],"synonyms":[{"name":"fibroepithelial polyp","type":"exact"},{"name":"fibropapilloma, benign","type":"exact"}],"termid":"MONDO:0060765","xrefs":{"Monarch":{"xref_id":"0060765"}}}


id: MONDO:0025517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a shrimp food product.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete shrimp allergy (obsolete MONDO:0025517)","secondary_identifiers":["DOID:0040001"],"synonyms":[{"name":"allergy of shrimp food product","type":"exact"},{"name":"shrimp food product allergic disease","type":"exact"}],"termid":"MONDO:0025517","xrefs":{"Monarch":{"xref_id":"0025517"}}}


id: GO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system pattern specification","synonyms":[{"name":"renal system pattern formation","type":"related"}],"termid":"GO:0072048"}


id: GO:2000296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of hydrogen peroxide metabolic process","termid":"GO:0010727"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide catabolic process","termid":"GO:2000295"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide catabolic process","termid":"GO:0042744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide catabolic process","synonyms":[{"name":"negative regulation of H2O2 catabolic process","type":"exact"},{"name":"negative regulation of H2O2 scavenging","type":"related"},{"name":"negative regulation of detoxification of H2O2","type":"related"},{"name":"negative regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"negative regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"negative regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"negative regulation of hydrogen peroxide degradation","type":"exact"},{"name":"negative regulation of hydrogen peroxide removal","type":"related"},{"name":"negative regulation of hydrogen peroxide scavenging","type":"related"}],"termid":"GO:2000296"}


id: GO:0098954
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a presynaptic endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"presynaptic endosome","termid":"GO:0098830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"presynaptic endosome membrane","termid":"GO:0098954"}


id: PBO:0048156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 2","termid":"PBO:0048156"}


id: GO:0050814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of epothilone, a drug obtained from the myxobacteria Sporangium cellulosum that interferes with cell division. Some epothilones are being studied as treatments for cancer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"epothilone metabolic process","termid":"GO:0050813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748","GO:0006790"],"is_obsolete":false,"name":"epothilone biosynthetic process","synonyms":[{"name":"epothilone anabolism","type":"exact"},{"name":"epothilone biosynthesis","type":"exact"},{"name":"epothilone formation","type":"exact"},{"name":"epothilone synthesis","type":"exact"}],"termid":"GO:0050814"}


id: GO:0042353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fucose (6-deoxygalactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose metabolic process","termid":"GO:0006004"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fucose biosynthetic process","synonyms":[{"name":"fucose anabolism","type":"exact"},{"name":"fucose biosynthesis","type":"exact"},{"name":"fucose formation","type":"exact"},{"name":"fucose synthesis","type":"exact"}],"termid":"GO:0042353"}


id: MONDO:1011789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrodysplasia ossificans, non-human animal","secondary_identifiers":["OMIA:000388"],"termid":"MONDO:1011789","xrefs":{"Monarch":{"xref_id":"1011789"}}}


id: PBO:0079733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 10 (pseudogene)","termid":"PBO:0079733"}


id: PBO:0086179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the transport of Gap1p; required for the transport of amino acid permease Gap1p from the Golgi to the cell surface; component of the TOR signaling pathway; associates with both Tor1p and Tor2p; contains a WD-repeat","termid":"PBO:0086179"}


id: PBO:0060549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAXD antisense RNA 1","termid":"PBO:0060549"}


id: GO:0110084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:vw","PMID:29343550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110082"},{"relation_name":"is_a","term_name":"negative regulation of mitotic actomyosin contractile ring assembly","termid":"GO:1903500"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:1903476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0000281","GO:0030036","GO:0007049","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"negative regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110084"}


id: MONDO:0014492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Woolly hair-palmoplantar keratoderma syndrome is a very rare, hereditary epidermal disorder characterized by hypotrichosis/wooly scalp hair, sparse body hair, eyelashes and eyebrows, leukonychia, and striate palmoplantar keratoderma (more severe on the soles than the palms), which progressively worsens with age. Pseudo ainhum of the fifth toes was also reported. Although wooly hair-palmoplantar keratoderma syndrome shares clinical similarities with both Naxos disease and Carvajal syndrome, cardiomyopathy is notably absent.","definition_xrefs":["Orphanet:420686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"wooly hair-palmoplantar keratoderma syndrome","secondary_identifiers":["GARD:17697","SCTID:764108000","DOID:0070554","MEDGEN:863639","OMIM:616099","UMLS:C4015202"],"synonyms":[{"name":"KWWH type IV","type":"exact"},{"name":"PPKWH","type":"related"},{"name":"keratoderma with woolly hair type IV","type":"exact"},{"name":"keratoderma with wooly hair type IV","type":"exact"},{"name":"palmoplantar keratoderma and woolly hair","type":"related"},{"name":"palmoplantar keratoderma and wooly hair","type":"related"},{"name":"woolly hair-palmoplantar hyperkeratosis syndrome","type":"exact"},{"name":"wooly hair-palmoplantar hyperkeratosis syndrome","type":"exact"}],"termid":"MONDO:0014492","xrefs":{"Monarch":{"xref_id":"0014492"}}}


id: PBO:0078188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 4-1","termid":"PBO:0078188"}


id: MONDO:0020702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"epidermolytic ichthyosis","termid":"MONDO:0007239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"autosomal dominant epidermolytic ichthyosis","secondary_identifiers":["NANDO:1200611","GARD:1039","Orphanet:312","NANDO:2200988","NCIT:C62569"],"termid":"MONDO:0020702","xrefs":{"Monarch":{"xref_id":"0020702"}}}


id: PBO:0042277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 8 pseudogene 1","termid":"PBO:0042277"}


id: PATO:0001284
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red hue and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red","termid":"PATO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated red","synonyms":[{"name":"pale red","type":"exact"}],"termid":"PATO:0001284"}


id: GO:0140136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts a nervous system process in another organism via the action of a venom.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of biological process","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of nervous system process","termid":"GO:0140136"}


id: GO:0052006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its host resulting in the breakdown of substances. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of substance in host (obsolete GO:0052006)","synonyms":[{"name":"catabolism by organism of substance in host","type":"exact"}],"termid":"GO:0052006"}


id: PBO:0030691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0030691"}


id: PBO:0085804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; deletion mutant shows strong genetic interaction with cdc28-as1 mutant in the presence of 1-NM-PP1; DCV1 has a paralog, YOL019W, that arose from the whole genome duplication","termid":"PBO:0085804"}


id: MONDO:0013617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete overgrowth-macrocephaly-facial dysmorphism syndrome (obsolete MONDO:0013617)","secondary_identifiers":["OMIM:614192"],"termid":"MONDO:0013617","xrefs":{"Monarch":{"xref_id":"0013617"}}}


id: PBO:0074187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 8","termid":"PBO:0074187"}


id: PBO:0060571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 7, pseudogene","termid":"PBO:0060571"}


id: PBO:0027633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_subtelomere-derived_RNA_level","termid":"PBO:0027633"}


id: GO:1990947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the progression from anaphase/telophase of meiosis II to the creation of end products of meiosis, in which ploidy is reduced by half.","definition_xrefs":["PMID:21389117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"exit from meiosis","synonyms":[{"name":"meiotic exit","type":"exact"}],"termid":"GO:1990947"}


id: MONDO:0971002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 94","secondary_identifiers":["UMLS:C5935627","MEDGEN:1855064","OMIM:620850","DOID:0070593"],"termid":"MONDO:0971002","xrefs":{"Monarch":{"xref_id":"0971002"}}}


id: PBO:0051982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jagged canonical Notch ligand 1","termid":"PBO:0051982"}


id: PBO:0068083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 389","termid":"PBO:0068083"}


id: PBO:0044759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 43","termid":"PBO:0044759"}


id: PBO:0081061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 24","termid":"PBO:0081061"}


id: PBO:0055759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA radiation induced regulator of PLK1 and RAD51","termid":"PBO:0055759"}


id: PBO:0048864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 9","termid":"PBO:0048864"}


id: PBO:0029443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_abnormal_cell_morphology_(obsolete_FYPO:0002272)","termid":"PBO:0029443"}


id: SO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A Y-RNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"Y_RNA_primary_transcript","termid":"SO:0002042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_Y_RNA_primary_transcript","synonyms":[{"name":"miR encoding Y-RNA primary transcript","type":"exact"}],"termid":"SO:0002043"}


id: GO:0090438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: (3S)-2,3-epoxy-2,3-dihydrosqualene = camelliol C.","definition_xrefs":["GOC:tb","PMID:17985917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"camelliol C synthase activity","synonyms":[{"name":"(3S)-2,3-epoxy-2,3-dihydrosqualene mutase (cyclizing, camelliol-C-forming)","type":"exact"}],"termid":"GO:0090438"}


id: MONDO:0005281
data:
  {"annotated_genes":["SJAG_03363","SJAG_04277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012672"},{"annotations":[87182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010939"}]},"cv_name":"mondo","definition":"A disease involving the gall bladder.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hepatobiliary disorder","termid":"MONDO:0002515"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03363":null,"SJAG_04277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:575.8","ICD10CM:K82","MESH:D005705","EFO:0003832","ICD9:575.9","UMLS:C0016977","MEDGEN:8947","NCIT:C34631","SCTID:39621005","DOID:0060262"],"synonyms":[{"name":"Gall bladder disorder","type":"exact"},{"name":"disease of gall bladder","type":"exact"},{"name":"disease or disorder of gall bladder","type":"exact"},{"name":"disorder of gall bladder","type":"exact"},{"name":"gall bladder disease","type":"exact"},{"name":"gall bladder disease or disorder","type":"exact"},{"name":"gallbladder disorder","type":"exact"}],"termid":"MONDO:0005281","terms_by_termid":{"MONDO:0010939":null,"MONDO:0012672":null},"xrefs":{"Monarch":{"xref_id":"0005281"}}}


id: PBO:0077039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 7","termid":"PBO:0077039"}


id: PBO:0064464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 2, accessory subunit","termid":"PBO:0064464"}


id: GO:0016180
data:
  {"annotated_genes":["SJAG_04818","SJAG_01521","SJAG_00854","SJAG_04286","SJAG_04824","SJAG_04153","SJAG_01234","SJAG_00081","SJAG_01958","SJAG_04084","SJAG_02993","SJAG_00566","SJAG_01176","SJAG_04586","SJAG_00319","SJAG_00559","SJAG_02156","SJAG_04321","SJAG_01798","SJAG_03572","SJAG_04754","SJAG_01191","SJAG_03179","SJAG_04527","SJAG_03257","SJAG_00083","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92480,109994,118054],"is_not":false,"summary":null,"term":"GO:0016180"},{"annotations":[97073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120049"},{"annotations":[117451,105748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034472"},{"annotations":[79412,61119,82110,108237,59458,108174,64928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"},{"annotations":[73380,73077,74210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034473"},{"annotations":[104088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034474"},{"annotations":[75325,90214,78028,76851,73078,74978,73381,78479,79473,76097,74211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034475"},{"annotations":[91823,73382,74212,73079,100840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034476"},{"annotations":[81221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034477"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary small nuclear RNA (snRNA) transcript into a mature snRNA molecule. The primary function of snRNAs is processing pre-messenger RNA in the nucleus. They have also been shown to aid in the regulation of transcription factors (7SK RNA) or RNA polymerase II (B2 RNA), and maintaining the telomeres.","definition_xrefs":["PMID:15196465","PMID:31815536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00083":null,"SJAG_00088":null,"SJAG_00319":null,"SJAG_00559":null,"SJAG_00566":null,"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01234":null,"SJAG_01521":null,"SJAG_01798":null,"SJAG_01958":null,"SJAG_02156":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03257":null,"SJAG_03572":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04286":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04586":null,"SJAG_04754":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016073","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"snRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"snRNA maturation","type":"exact"},{"name":"snRNA production","type":"exact"}],"termid":"GO:0016180","terms_by_termid":{"GO:0016180":null,"GO:0031120":null,"GO:0034472":null,"GO:0034473":null,"GO:0034474":null,"GO:0034475":null,"GO:0034476":null,"GO:0034477":null,"GO:0120049":null}}


id: PR:Q10237
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcf11 gene.","definition_xrefs":["UniProtKB:Q10237","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4G9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.04c","synonyms":[{"name":"Spom972h-pcf11","type":"exact"}],"termid":"PR:Q10237"}


id: MOD:00585
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes three (2)H deuterium atoms for three (1)H protium atoms.","definition_xrefs":["Unimod:262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium substituted residue","termid":"MOD:00786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium trisubstituted residue","synonyms":[{"name":"D(H)3Res","type":"exact"},{"name":"Label:2H(3)","type":"related"},{"name":"Trideuteration","type":"related"}],"termid":"MOD:00585"}


id: PBO:0063081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pappalysin 2","termid":"PBO:0063081"}


id: GO:0090171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a chondrocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a chondrocyte.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte morphogenesis","termid":"GO:0090171"}


id: PATO:0001145
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001145 ig m concentration value (obsolete PATO:0001145)","termid":"PATO:0001145"}


id: FYECO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which mannose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ mannose","termid":"FYECO:0000152"}


id: GO:0015494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: aromatic amino acid(out) + H+(out) = aromatic amino acid(in) + H+(in).","definition_xrefs":["TC:2.A.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"aromatic amino acid:proton symporter activity","synonyms":[{"name":"aromatic amino acid:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015494"}


id: MONDO:0009955
data:
  {"annotated_genes":["SJAG_02200","SJAG_04995"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87398,87399],"is_not":false,"summary":null,"term":"MONDO:0009955"}]},"cv_name":"mondo","definition":"RAPADILINO syndrome is a syndrome for which the acronym indicates the principal signs: RA for radial ray defect, PA for both patellae hypoplasia or aplasia and cleft or highly arched palate, DI for diarrhea and dislocated joints, LI for little size and limb malformations, NO for long, slender nose and normal intelligence.","definition_xrefs":["Orphanet:3021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02200":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"rapadilino syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050774","NANDO:1201058","icd11.foundation:1439614760","SCTID:702413000","GARD:4637","MESH:C535288","OMIM:266280","ICD9:759.89","UMLS:C1849453","MEDGEN:336602"],"synonyms":[{"name":"absent thumbs, dislocated joints, long face with narrow palpebral fissures, long slender nose, arched palate","type":"related"},{"name":"radial and patellar aplasia","type":"related"},{"name":"radial and patellar hypoplasia","type":"related"},{"name":"rapadilino syndrome","type":"exact"}],"termid":"MONDO:0009955","terms_by_termid":{"MONDO:0009955":null},"xrefs":{"Monarch":{"xref_id":"0009955"}}}


id: GO:0097251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"leukotriene B4 metabolic process","termid":"GO:0036102"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"leukotriene B4 biosynthetic process","synonyms":[{"name":"LTB4 anabolism","type":"exact"},{"name":"LTB4 biosynthesis","type":"exact"},{"name":"LTB4 formation","type":"exact"},{"name":"LTB4 synthesis","type":"exact"},{"name":"leukotriene B4 anabolism","type":"exact"},{"name":"leukotriene B4 biosynthesis","type":"exact"},{"name":"leukotriene B4 formation","type":"exact"},{"name":"leukotriene B4 synthesis","type":"exact"}],"termid":"GO:0097251"}


id: PBO:0040177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate dehydrogenase domain containing","termid":"PBO:0040177"}


id: PBO:0041992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 38","termid":"PBO:0041992"}


id: GO:0019776
data:
  {"annotated_genes":["SJAG_06309","SJAG_01561","SJAG_03136"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73855,111746,112249],"is_not":false,"summary":null,"term":"GO:0019776"}]},"cv_name":"molecular_function","definition":"Catalysis of the covalent attachment of the ubiquitin-like protein Atg8 family modifier to phosphatidylethanolamine or phosphatidylserine on a membrane.","definition_xrefs":["PMID:12826404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01561":null,"SJAG_03136":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0019787","GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"Atg8-family ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5681981"],"synonyms":[{"name":"APG8 ligase activity","type":"exact"},{"name":"Atg8 ligase activity","type":"narrow"},{"name":"Atg8-like ligase activity","type":"exact"}],"termid":"GO:0019776","terms_by_termid":{"GO:0019776":null}}


id: GO:0071489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to red or far red light","termid":"GO:0071489"}


id: PBO:0004460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp43 (predicted)","termid":"PBO:0004460"}


id: PBO:0003703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Asparagine","termid":"PBO:0003703"}


id: PBO:0048975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 4","termid":"PBO:0048975"}


id: GO:1990187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a protein is transported to, or maintained at mRNA.","definition_xrefs":["GOC:rb","PMID:22890846"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to mRNA (obsolete GO:1990187)","synonyms":[{"name":"protein localization to mRNA","type":"exact"}],"termid":"GO:1990187"}


id: FYPO:0003413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, forms one or more branches near a septum, is elongated, and has more than one septum.","definition_xrefs":["PMID:18256290","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated, multiseptate cell","termid":"FYPO:0000134"},{"relation_name":"is_a","term_name":"inviable elongated multiseptate vegetative cell","termid":"FYPO:0001494"},{"relation_name":"is_a","term_name":"inviable branched, elongated vegetative cell","termid":"FYPO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"inviable branched, elongated, multiseptate vegetative cell","synonyms":[{"name":"inviable branched, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable branched, elongated, multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, long, multiseptate cell","type":"exact"},{"name":"lethal; branched, elongated, multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0003413"}


id: MONDO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital syphilis that is manifested between 0 and 2 years old.","definition_xrefs":["Wikipedia:Congenital_syphilis#Early"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital syphilis","termid":"MONDO:0005714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early congenital syphilis","secondary_identifiers":["SCTID:4359001","icd11.foundation:108348777","MEDGEN:546894","DOID:0050488","UMLS:C0275859","ICD9:090.2"],"synonyms":[{"name":"Early congenital syphilis (less than 2 years)","type":"broad"}],"termid":"MONDO:0000333","xrefs":{"Monarch":{"xref_id":"0000333"}}}


id: GO:0098824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The sulfation of peptidyl-cysteine to form S-sulfo-L-cysteine.","definition_xrefs":["RESID:AA0171"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine sulfation (obsolete GO:0098824)","termid":"GO:0098824"}


id: PBO:0027835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_septum_disassembly","termid":"PBO:0027835"}


id: SO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The restriction enzyme cleavage junction on the 3' strand of the nucleotide sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"single_strand_restriction_enzyme_cleavage_site","termid":"SO:0001694"},{"relation_name":"part_of","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_restriction_enzyme_junction","synonyms":[{"name":"3' restriction enzyme junction","type":"exact"}],"termid":"SO:0001690"}


id: PR:Q9USH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.04 gene.","definition_xrefs":["UniProtKB:Q9USH0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein P31B10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.04","synonyms":[{"name":"Spom972h-SPCP31B10.04","type":"exact"}],"termid":"PR:Q9USH0"}


id: MONDO:0000945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Impaired venous blood flow or venous return (venous stasis), usually caused by inadequate venous valves. Venous insufficiency often occurs in the legs, and is associated with edema and sometimes with venous stasis ulcers at the ankle.","definition_xrefs":["MESH:D014689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"venous insufficiency","secondary_identifiers":["ICD9:459.81","MEDGEN:21841","UMLS:C0042485","SCTID:20696009","DOID:10128","HP:0005293"],"synonyms":[{"name":"peripheral venous insufficiency","type":"narrow"},{"name":"venous insufficiency","type":"exact"},{"name":"venous insufficiency (disease)","type":"exact"}],"termid":"MONDO:0000945","xrefs":{"Monarch":{"xref_id":"0000945"}}}


id: PBO:0110393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEFH pseudogene 1","termid":"PBO:0110393"}


id: PBO:0041442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C9orf78 pseudogene 1","termid":"PBO:0041442"}


id: PBO:0002724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASp homolog","termid":"PBO:0002724"}


id: MONDO:0024565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ectodermal dysplasia-syndactyly syndrome in which the cause of the disease is a mutation in the NECTIN4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia-syndactyly syndrome","termid":"MONDO:0013311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia-syndactyly syndrome 1","secondary_identifiers":["UMLS:C3150807","MEDGEN:462157","OMIM:613573"],"synonyms":[{"name":"EDSS1","type":"related"},{"name":"NECTIN4 ectodermal dysplasia-syndactyly syndrome","type":"exact"},{"name":"ectodermal dysplasia-syndactyly syndrome 1","type":"exact"},{"name":"ectodermal dysplasia-syndactyly syndrome caused by mutation in NECTIN4","type":"exact"}],"termid":"MONDO:0024565","xrefs":{"Monarch":{"xref_id":"0024565"}}}


id: PBO:0111906
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain","termid":"PBO:0111906"}


id: PBO:0083559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene PMT1/YDL095W; YDL096C is not essential","termid":"PBO:0083559"}


id: PBO:0003802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Erf2 (predicted)","termid":"PBO:0003802"}


id: GO:0031714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C5a anaphylatoxin chemotactic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"C5a anaphylatoxin chemotactic receptor binding","synonyms":[{"name":"C5a anaphylatoxin chemotactic receptor ligand","type":"narrow"}],"termid":"GO:0031714"}


id: GO:0004089
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79350],"is_not":false,"summary":null,"term":"GO:0004089"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogencarbonate + H+ = CO2 + H2O.","definition_xrefs":["EC:4.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"carbonate dehydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:10748","Reactome:R-HSA-1237081","Reactome:R-HSA-1237059","Reactome:R-HSA-1237047","Reactome:R-HSA-1475017","Reactome:R-HSA-1475022","Reactome:R-HSA-1475025","Reactome:R-HSA-1237045","Reactome:R-HSA-1475032","MetaCyc:RXN0-5224","Reactome:R-HSA-1475435","Reactome:R-HSA-1475028","Reactome:R-HSA-1475436","Reactome:R-HSA-1475026"],"synonyms":[{"name":"anhydrase activity","type":"related"},{"name":"carbonate anhydrase activity","type":"related"},{"name":"carbonate hydro-lyase (carbon-dioxide-forming)","type":"related"},{"name":"carbonate hydro-lyase activity","type":"related"},{"name":"carbonic acid anhydrase activity","type":"related"},{"name":"carbonic anhydrase A","type":"related"},{"name":"carbonic anhydrase activity","type":"exact"},{"name":"carbonic dehydratase activity","type":"related"},{"name":"carboxyanhydrase activity","type":"related"}],"termid":"GO:0004089","terms_by_termid":{"GO:0004089":null}}


id: GO:0090233
data:
  {"annotated_genes":["SJAG_03126","SJAG_04259","SJAG_03681","SJAG_00883","SJAG_02451","SJAG_03353","SJAG_02336","SJAG_01679","SJAG_02169","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116268,105816,113944,115775,117903,109181,101488,92569,110213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[96064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spindle checkpoint","termid":"GO:0090231"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle checkpoint","termid":"GO:1901977"},{"relation_name":"negatively_regulates","term_name":"spindle checkpoint signaling","termid":"GO:0031577"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"negative regulation of spindle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle checkpoint silencing","type":"narrow"}],"termid":"GO:0090233","terms_by_termid":{"GO:0140499":null,"GO:1902426":null}}


id: PBO:0116327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular 5'-nucleotidase, human NT5E family Efn1","termid":"PBO:0116327"}


id: GO:0034437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a glycoprotein from one side of a membrane to the other.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete glycoprotein transmembrane transporter activity (obsolete GO:0034437)","synonyms":[{"name":"glycoprotein transporter activity","type":"related"}],"termid":"GO:0034437"}


id: PBO:0111069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fbp1 upstream regulatory lncRNA a","termid":"PBO:0111069"}


id: PBO:0057767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2113","termid":"PBO:0057767"}


id: PBO:0040532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-N-acetylgalactosaminyltransferase 2","termid":"PBO:0040532"}


id: GO:0042958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of maltodextrin, any polysaccharide of glucose residues in beta-(1,4) linkage, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","PMID:15034926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dextrin transmembrane transporter activity","termid":"GO:0042957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"maltodextrin transmembrane transporter activity","termid":"GO:0042958"}


id: GO:0015984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of noncoupled solute translocation or facilitated diffusion.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete uniport (obsolete GO:0015984)","synonyms":[{"name":"uniport","type":"exact"}],"termid":"GO:0015984"}


id: PBO:0078155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 33 (pseudogene)","termid":"PBO:0078155"}


id: PBO:0070352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 25","termid":"PBO:0070352"}


id: PBO:0065870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB27A, member RAS oncogene family","termid":"PBO:0065870"}


id: PBO:0059531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Cys (UGU/C)","termid":"PBO:0059531"}


id: PBO:0112609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF5102 family, associated with clathrin coated vesicles","termid":"PBO:0112609"}


id: FYPO:0001178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells in a culture in stationary phase are deprived of nitrogen.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nutrient depletion","termid":"FYPO:0000244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability upon nitrogen starvation","synonyms":[{"name":"decreased viability upon nitrogen starvation","type":"exact"},{"name":"loss of cell population viability upon nitrogen starvation","type":"exact"},{"name":"loss of viability in stationary phase upon nitrogen depletion","type":"related"},{"name":"loss of viability upon nitrogen depletion","type":"exact"},{"name":"loss of viability upon nitrogen deprivation","type":"exact"},{"name":"reduced viability upon nitrogen starvation","type":"exact"}],"termid":"FYPO:0001178"}


id: MONDO:0008800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia with limb anomalies, also known as ophthalmo-acromelic syndrome (OAS), is a rare developmental disorder characterized by bilateral microphthalmia or anophthalmia, synostosis, syndactyly, oligodactyly and/or polydactyly.","definition_xrefs":["Orphanet:1106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"microphthalmia with limb anomalies","secondary_identifiers":["DOID:0060861","ICD9:755.8","GARD:722","MEDGEN:154638","MESH:C537769","OMIM:206920","UMLS:C0599973","SCTID:703403003"],"synonyms":[{"name":"MLA","type":"exact"},{"name":"OAS","type":"exact"},{"name":"Ophthalmoacromelic syndrome","type":"exact"},{"name":"Waardenburg anophthalmia syndrome","type":"exact"},{"name":"anophthalmia Waardenburg syndrome","type":"related"},{"name":"anophthalmia-syndactyly","type":"related"},{"name":"anophthalmia-syndactyly syndrome","type":"exact"},{"name":"anophthalmos with limb anomalies","type":"related"},{"name":"anophthalmos-syndactyly","type":"related"},{"name":"microphthalmia with limb anomalies","type":"exact"},{"name":"ophthalmoacromelic syndrome","type":"exact"}],"termid":"MONDO:0008800","xrefs":{"Monarch":{"xref_id":"0008800"}}}


id: PBO:0002334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoglycolate hydrolase (predicted)","termid":"PBO:0002334"}


id: FYPO:0000113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to staurosporine. Cells stop growing (and may die) at a concentration of staurosporine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to staurosporine","synonyms":[{"name":"hypersensitive to staurosporine","type":"exact"},{"name":"sensitive to staurosporine during mitotic cell cycle","type":"related"},{"name":"sensitive to staurosporine during vegetative growth","type":"exact"}],"termid":"FYPO:0000113"}


id: FYPO:0006679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing chromium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on chromium","synonyms":[{"name":"normal cell population growth in presence of chromium","type":"exact"},{"name":"normal cell population growth on chromium","type":"exact"},{"name":"normal cell population growth on chromium ion","type":"exact"},{"name":"normal cellular response to chromium","type":"related"},{"name":"normal growth on chromium ions","type":"exact"},{"name":"normal vegetative cell population growth on chromium","type":"exact"}],"termid":"FYPO:0006679"}


id: PBO:0076854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tet methylcytosine dioxygenase 1 pseudogene 1","termid":"PBO:0076854"}


id: GO:1904094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of autophagic cell death.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bhm","PMID:25736836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of autophagic cell death","termid":"GO:1904092"},{"relation_name":"positively_regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of autophagic cell death","synonyms":[{"name":"activation of autophagic cell death","type":"narrow"},{"name":"activation of programmed cell death by macroautophagy","type":"narrow"},{"name":"activation of type II programmed cell death","type":"related"},{"name":"positive regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"positive regulation of type II programmed cell death","type":"related"},{"name":"up regulation of autophagic cell death","type":"exact"},{"name":"up regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"up regulation of type II programmed cell death","type":"related"},{"name":"up-regulation of autophagic cell death","type":"exact"},{"name":"up-regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"up-regulation of type II programmed cell death","type":"related"},{"name":"upregulation of autophagic cell death","type":"exact"},{"name":"upregulation of programmed cell death by macroautophagy","type":"exact"},{"name":"upregulation of type II programmed cell death","type":"related"}],"termid":"GO:1904094"}


id: MONDO:0018406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility due to adrenal disorder of genetic origin (obsolete MONDO:0018406)","secondary_identifiers":["Orphanet:399994"],"termid":"MONDO:0018406","xrefs":{"Monarch":{"xref_id":"0018406"}}}


id: MONDO:0958298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A round cell sarcoma with EWSR1-non-ETS fusion that is characterized by EWSR1-non-ETS fusion that occurs during childhood.","definition_xrefs":["DOID:0081407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"round cell sarcoma with EWSR1-non-ETS fusion","termid":"MONDO:0958160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood round cell sarcoma with EWSR1-non-ETS fusion","secondary_identifiers":["MEDGEN:1817086","UMLS:C5708181"],"termid":"MONDO:0958298","xrefs":{"Monarch":{"xref_id":"0958298"}}}


id: PBO:0028334
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_5-fluorouracil","termid":"PBO:0028334"}


id: PBO:0039589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 7","termid":"PBO:0039589"}


id: PBO:0073774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 8","termid":"PBO:0073774"}


id: PBO:0060310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase","termid":"PBO:0060310"}


id: PBO:0082185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol acetyltransferase; may play a role in steroid detoxification; forms volatile esters during fermentation, which is important for brewing and winemaking","termid":"PBO:0082185"}


id: MONDO:0021340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial dermatitis occurring on skin surfaces in contact with each other, such as the axillae, neck creases, intergluteal fold, between the toes, etc. Obesity is a predisposing factor. The condition is caused by moisture and friction and is characterized by erythema, maceration, burning, and exudation.","definition_xrefs":["MESH:D007402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"intertrigo","secondary_identifiers":["ICD9:695.89","MEDGEN:43928","UMLS:C0021807","SCTID:58759008"],"synonyms":[{"name":"Eczema intertrigo","type":"related"},{"name":"Erythema intertrigo","type":"related"},{"name":"Intertrigo","type":"related"}],"termid":"MONDO:0021340","xrefs":{"Monarch":{"xref_id":"0021340"}}}


id: PBO:0085854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)- fusion protein localizes to the mother side of the bud neck and the vacuole; YOL007C is not an essential gene","termid":"PBO:0085854"}


id: RO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"immediately_preceded_by","termid":"RO:0002087"},{"relation_name":"is_a","term_name":"causally_downstream_of","termid":"RO:0002404"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_causally_downstream_of","termid":"RO:0002405"}


id: PBO:0078840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 3-4","termid":"PBO:0078840"}


id: PBO:0061838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid growth factor receptor like 1","termid":"PBO:0061838"}


id: GO:0140041
data:
  {"annotated_genes":["SJAG_02960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106988],"is_not":false,"summary":null,"term":"GO:0140041"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of methylglyoxal. These may include chemical modification or transport of methylglyoxal away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["PMID:15042280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification of aldehyde","termid":"GO:0110095"},{"relation_name":"part_of","term_name":"cellular response to methylglyoxal","termid":"GO:0097238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of methylglyoxal","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140041","terms_by_termid":{"GO:0140041":null}}


id: PBO:0031831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_nucleus","termid":"PBO:0031831"}


id: GO:0046377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving colanic acid, a capsular bacterial polysaccharide composed of glucose, galactose, fucose and glucuronic acid residues.","definition_xrefs":["PMID:35630322","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colanic acid metabolic process","synonyms":[{"name":"colanic acid metabolism","type":"exact"}],"termid":"GO:0046377"}


id: PBO:0036524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase Ura6","termid":"PBO:0036524"}


id: GO:0061065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dauer larval development","termid":"GO:0061065"}


id: GO:0060974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that contribute to the formation of the heart. The initial heart structure is made up of mesoderm-derived heart progenitor cells and neural crest-derived cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"heart formation","termid":"GO:0060914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart formation","termid":"GO:0060974"}


id: FYECO:0000400
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which anidulafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ anidulafungin","termid":"FYECO:0000398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ anidulafungin LD","termid":"FYECO:0000400"}


id: PBO:0017803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic septin Spn1","termid":"PBO:0017803"}


id: PBO:0087105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein of the small (40S) subunit; homologous to mammalian ribosomal protein S3A, no bacterial homolog; RPS1A has a paralog, RPS1B, that arose from the whole genome duplication","termid":"PBO:0087105"}


id: PBO:0003023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similar to fragment of cox1 intron protein","termid":"PBO:0003023"}


id: GO:0030569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the serine endopeptidase chymotrypsin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chymotrypsin inhibitor activity (obsolete GO:0030569)","synonyms":[{"name":"chymotrypsin inhibitor activity","type":"exact"}],"termid":"GO:0030569"}


id: MONDO:0020628
data:
  {"annotated_genes":["SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88251],"is_not":false,"summary":null,"term":"MONDO:0020628"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"microcephaly, growth restriction and increased sister chromatid exchange","termid":"MONDO:0020629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"microcephaly, growth restriction, and increased sister chromatid exchange 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618097","UMLS:C4748176","GARD:18507","MEDGEN:1648384"],"synonyms":[{"name":"MGRISCE2","type":"related"},{"name":"microcephaly, growth restriction, and increased sister chromatid exchange 2","type":"exact"}],"termid":"MONDO:0020628","terms_by_termid":{"MONDO:0020628":null},"xrefs":{"Monarch":{"xref_id":"0020628"}}}


id: MONDO:0850312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant astrocytoma that is characterized by the presence of five or more mitoses per 10 high-power fields.","definition_xrefs":["DOID:0080854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplastic pleomorphic xanthoastrocytoma","secondary_identifiers":["UMLS:C4283858","NCIT:C129327","MEDGEN:924393","GARD:13624"],"termid":"MONDO:0850312","xrefs":{"Monarch":{"xref_id":"0850312"}}}


id: GO:0071298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an L-ascorbic acid (vitamin C) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to L-ascorbic acid","termid":"GO:0033591"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to monosaccharide stimulus","termid":"GO:0071326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-ascorbic acid","synonyms":[{"name":"cellular response to L-ascorbate","type":"exact"},{"name":"cellular response to ascorbic acid","type":"broad"},{"name":"cellular response to vitamin C","type":"exact"}],"termid":"GO:0071298"}


id: GO:1902013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(glycerol phosphate) teichoic acid.","definition_xrefs":["GOC:TermGenie","PMID:11882717","UniPathway:UPA00827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(glycerol phosphate) teichoic acid metabolic process","synonyms":[{"name":"poly(glycerol phosphate) teichoic acid metabolism","type":"exact"}],"termid":"GO:1902013"}


id: FYPO:0006739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30134042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at gene promoter region","termid":"FYPO:0008245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at MCB promoters during vegetative growth","synonyms":[{"name":"normal protein localisation to chromatin at MCB promoters during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at MCB promoters during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at MCB target genes during vegetative growth","type":"related"},{"name":"normal protein localization to chromatin at MCB-containing promoters during vegetative growth","type":"exact"}],"termid":"FYPO:0006739"}


id: PBO:0077806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 4","termid":"PBO:0077806"}


id: GO:0035960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ergosterol biosynthetic process by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:11533229","PMID:16055745","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035960)","synonyms":[{"name":"regulation of ergosterol anabolism by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol anabolism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol biosynthesis by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol biosynthesis by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol biosynthetic process by regulation of transcription from Pol II promoter","type":"related"},{"name":"regulation of ergosterol formation by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol formation by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol synthesis by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol synthesis by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:0035960"}


id: PBO:0111832
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C5HC2 type","termid":"PBO:0111832"}


id: GO:1904021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of G protein-coupled receptor internalization.","definition_xrefs":["GO_REF:0000058","PMID:24732013","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of receptor internalization","termid":"GO:0002091"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor internalization","termid":"GO:1904020"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled receptor internalization","termid":"GO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of G protein-coupled receptor internalization","synonyms":[{"name":"down regulation of G-protein coupled receptor internalization","type":"exact"},{"name":"down-regulation of G-protein coupled receptor internalization","type":"exact"},{"name":"downregulation of G-protein coupled receptor internalization","type":"exact"},{"name":"inhibition of G-protein coupled receptor internalization","type":"narrow"},{"name":"negative regulation of G-protein coupled receptor internalization","type":"exact"}],"termid":"GO:1904021"}


id: PBO:0084227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H subunit of the mitochondrial glycine decarboxylase complex; glycine decarboxylase is required for the catabolism of glycine to 5,10-methylene-THF; also required for all protein lipoylation; expression is regulated by levels of 5,10-methylene-THF","termid":"PBO:0084227"}


id: GO:0071229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of the dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["Wikipedia:Acid","GOC:go_curators","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acid chemical","synonyms":[{"name":"cellular response to acid","type":"broad"},{"name":"cellular response to acid anion","type":"related"},{"name":"cellular response to oxoanion","type":"related"}],"termid":"GO:0071229"}


id: GO:1900281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell costimulation.","definition_xrefs":["GOC:pr","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell costimulation","termid":"GO:1900279"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"},{"relation_name":"is_a","term_name":"positive regulation of T cell costimulation","termid":"GO:2000525"},{"relation_name":"positively_regulates","term_name":"CD4-positive, alpha-beta T cell costimulation","termid":"GO:0035783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4-positive, alpha-beta T cell costimulation","synonyms":[{"name":"activation of CD4-positive, alpha beta T cell costimulation","type":"narrow"},{"name":"positive regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"up regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"up-regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"upregulation of CD4-positive, alpha beta T cell costimulation","type":"exact"}],"termid":"GO:1900281"}


id: PBO:0116743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2","termid":"PBO:0116743"}


id: PBO:0091463
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ell Binding Protein","termid":"PBO:0091463"}


id: PBO:0011979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rad55/Rhp55","termid":"PBO:0011979"}


id: PBO:0064548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 10, pseudogene","termid":"PBO:0064548"}


id: MONDO:0033211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diencephalic-mesencephalic junction dysplasia syndrome (obsolete MONDO:0033211)","termid":"MONDO:0033211","xrefs":{"Monarch":{"xref_id":"0033211"}}}


id: PBO:0076463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator and scaffold protein tamalin","termid":"PBO:0076463"}


id: PBO:0061597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUAK family kinase 1","termid":"PBO:0061597"}


id: MONDO:0015089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of complex hereditary spastic paraplegia.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive complex spastic paraplegia (obsolete MONDO:0015089)","secondary_identifiers":["Orphanet:100981"],"synonyms":[{"name":"autosomal recessive complex HSP","type":"exact"},{"name":"autosomal recessive complex SPG","type":"exact"},{"name":"autosomal recessive complex hereditary spastic paraplegia","type":"exact"},{"name":"autosomal recessive complicated HSP","type":"exact"},{"name":"autosomal recessive complicated SPG","type":"exact"},{"name":"autosomal recessive complicated spastic paraplegia","type":"exact"},{"name":"complex hereditary spastic paraplegia, autosomal recessive","type":"exact"}],"termid":"MONDO:0015089","xrefs":{"Monarch":{"xref_id":"0015089"}}}


id: GO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proliferation of cells in the inner cell mass.","definition_xrefs":["GOC:isa_complete","ISBN:0124020607","GOC:dph","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"blastocyst growth","termid":"GO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner cell mass cell proliferation","termid":"GO:0001833"}


id: PBO:0047101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM151B divergent transcript","termid":"PBO:0047101"}


id: PBO:0055019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2434","termid":"PBO:0055019"}


id: PBO:0013125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Luc7","termid":"PBO:0013125"}


id: FYPO:0002350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal stress granule assembly during vegetative growth","synonyms":[{"name":"normal cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"normal stress granule assembly during mitotic cell cycle","type":"related"},{"name":"normal stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0002350"}


id: GO:0010979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of vitamin D 24-hydroxylase activity. Vitamin D 24-hydroxylase activity catalyzes the hydroxylation of C-24 of any form of vitamin D.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vitamin D 24-hydroxylase activity (obsolete GO:0010979)","termid":"GO:0010979"}


id: PBO:0079233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 8","termid":"PBO:0079233"}


id: PBO:0064175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XB, pseudogene","termid":"PBO:0064175"}


id: GO:0072085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the connecting tubule of the kidney nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"connecting tubule development","termid":"GO:0072027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of connecting tubule identity","termid":"GO:0072085"}


id: MONDO:1012210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"perosomus elumbis, non-human animal","termid":"MONDO:1011668"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perosomus elumbis, cattle","secondary_identifiers":["OMIA:000789-9913"],"termid":"MONDO:1012210","xrefs":{"Monarch":{"xref_id":"1012210"}}}


id: GO:0018362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent linkage of heme to peroxidase via dihydroxyheme-L-aspartyl ester-L-glutamyl ester.","definition_xrefs":["RESID:AA0279"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxidase-heme linkage via dihydroxyheme-L-aspartyl ester-L-glutamyl ester (obsolete GO:0018362)","synonyms":[{"name":"peroxidase-haem linkage via dihydroxyhaem-L-aspartyl ester-L-glutamyl ester","type":"exact"}],"termid":"GO:0018362"}


id: MONDO:0017592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"staphylococcal infection","termid":"MONDO:0024313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal toxemia","secondary_identifiers":["MedDRA:10041932","Orphanet:300579","UMLS:C0854511","GARD:21239","MEDGEN:799765"],"termid":"MONDO:0017592","xrefs":{"Monarch":{"xref_id":"0017592"}}}


id: FYPO:0006190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is longer than normal during anaphase A.","definition_xrefs":["PMID:12426374","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle during anaphase","termid":"FYPO:0004438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000120","FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"long mitotic spindle during anaphase A","synonyms":[{"name":"elongated mitotic spindle during anaphase A","type":"exact"},{"name":"increased mitotic spindle length during anaphase A","type":"exact"},{"name":"long bipolar mitotic spindle during anaphase A","type":"exact"},{"name":"long mitotic spindle during anaphase A during vegetative growth","type":"exact"},{"name":"long mitotic spindles during anaphase A","type":"exact"},{"name":"long spindle during anaphase A of mitosis","type":"exact"},{"name":"long spindle during mitotic anaphase A","type":"exact"}],"termid":"FYPO:0006190"}


id: GO:0050490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a 1,4-lactone = a 4-hydroxyacid.","definition_xrefs":["EC:3.1.1.25","MetaCyc:14-LACTONASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"1,4-lactonase activity","secondary_identifiers":["RHEA:12745"],"synonyms":[{"name":"1,4-lactone hydroxyacylhydrolase activity","type":"related"},{"name":"gamma-lactonase activity","type":"related"}],"termid":"GO:0050490"}


id: PBO:0005639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Cox18","termid":"PBO:0005639"}


id: MONDO:0023007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disorder, characterized by under-development of bone marrow and neurological disorders such as weakness on one side of the body, agenesis of corpus callosum and hydrocephalus.","definition_xrefs":["PMID:2264478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"bone marrow disorder","termid":"MONDO:0003225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Drachtman Weinblatt Sitarz syndrome","secondary_identifiers":["UMLS:C2930947","MESH:C535603","GARD:1913","MEDGEN:419292"],"synonyms":[{"name":"Drachtman Weinblatt Sitarz syndrome","type":"exact"},{"name":"marrow hypoplasia associated with congenital neurologic anomalies","type":"related"}],"termid":"MONDO:0023007","xrefs":{"Monarch":{"xref_id":"0023007"}}}


id: MOD:01844
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue and an L-leucine residue to 2-(3-methylbutanoyl)-5-hydroxyoxazole-4-carbothionic acid.","definition_xrefs":["PubMed:15361623","RESID:AA0550","PubMed:21254756","PubMed:18729522","PubMed:20961038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Cys)","termid":"MOD:01856"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-leucine residue","termid":"MOD:02050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(3-methylbutanoyl)-5-hydroxyoxazole-4-carbothionic acid","synonyms":[{"name":"(4Z)-4-[hydroxy(sulfanyl)methylidene]-2-(3-methylbutanoyl)-1,3-oxazol-5(4H)-one [tautomer]","type":"exact"},{"name":"2-(3-methylbutanoyl)-5-hydroxyoxazole-4-carbothionic acid","type":"exact"},{"name":"5-hydroxy-2-(3-methylbutanoyl)-1,3-oxazole-4-carbothioic O-acid","type":"exact"},{"name":"MOD_RES 2-(3-methylbutanoyl)-5-hydroxyoxazole-4-carbothionic acid (Leu-Cys)","type":"exact"}],"termid":"MOD:01844"}


id: PBO:0029710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_at_high_pH","termid":"PBO:0029710"}


id: PBO:0055634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3073","termid":"PBO:0055634"}


id: GO:2000947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amylopectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of starch catabolic process","termid":"GO:2000883"},{"relation_name":"is_a","term_name":"positive regulation of amylopectin metabolic process","termid":"GO:2000944"},{"relation_name":"is_a","term_name":"regulation of amylopectin catabolic process","termid":"GO:2000945"},{"relation_name":"positively_regulates","term_name":"amylopectin catabolic process","termid":"GO:2000897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of amylopectin catabolic process","synonyms":[{"name":"positive regulation of Amylopectin catabolism","type":"exact"}],"termid":"GO:2000947"}


id: GO:0033366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a secretory granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to secretory granule","synonyms":[{"name":"protein localisation in secretory granule","type":"exact"},{"name":"protein localization in secretory granule","type":"exact"}],"termid":"GO:0033366"}


id: GO:0141064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that contributes to the onset of de novo transcription from the zygotic genome as part of the maternal-to-zygote transition in gene expression. The zygote overcomes the silencing that has been established. The cause of this silencing could be due to several factors: chromatin modifications leading to repression, or lack of adequate transcription machinery.","definition_xrefs":["PMID:20808952","PMID:19204068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"part_of","term_name":"maternal-to-zygotic transition of gene expression","termid":"GO:0160021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"zygotic genome activation","synonyms":[{"name":"ZGA","type":"broad"}],"termid":"GO:0141064"}


id: GO:0061691
data:
  {"annotated_genes":["SJAG_01216","SJAG_01199","SJAG_00141","SJAG_04953","SJAG_04823","SJAG_02515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119379,110801,120320,97078,101904,106985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of hydrogen peroxide. These include transport of hydrogen peroxide away from sensitive areas and to compartments or complexes whose purpose is sequestration.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"},{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"response to hydrogen peroxide","termid":"GO:0042542"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of hydrogen peroxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061691","terms_by_termid":{"GO:0061692":null}}


id: GO:1904719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of AMPA glutamate receptor clustering.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:hjd","PMID:21558424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of postsynaptic membrane organization","termid":"GO:1901628"},{"relation_name":"is_a","term_name":"positive regulation of receptor clustering","termid":"GO:1903911"},{"relation_name":"is_a","term_name":"regulation of AMPA glutamate receptor clustering","termid":"GO:1904717"},{"relation_name":"positively_regulates","term_name":"AMPA glutamate receptor clustering","termid":"GO:0097113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of AMPA glutamate receptor clustering","synonyms":[{"name":"activation of AMPA glutamate receptor clustering","type":"narrow"},{"name":"activation of AMPA receptor clustering","type":"narrow"},{"name":"activation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"narrow"},{"name":"positive regulation of AMPA receptor clustering","type":"exact"},{"name":"positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"up regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"up regulation of AMPA receptor clustering","type":"exact"},{"name":"up regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"up-regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"up-regulation of AMPA receptor clustering","type":"exact"},{"name":"up-regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"upregulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"upregulation of AMPA receptor clustering","type":"exact"},{"name":"upregulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"}],"termid":"GO:1904719"}


id: GO:0044677
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisted of eight polypeptides. This complex catalyzes the formation of methyl-coenzyme M and H4MPT from N5-methyl-H4MPT and CoM during methanogenesis.","definition_xrefs":["GOC:mengo_curators","PMID:8477726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methyl-tetrahydromethanopterin:coenzyme M methyltransferase complex","synonyms":[{"name":"5-methyl-5,6,7,8-tetrahydromethanopterin:2-mercaptoethane sulfonate 2-methyltransferase complex","type":"exact"},{"name":"N5-methyltetrahydromethanopterin-coenzyme M methyltransferase complex","type":"exact"},{"name":"coenzyme M methyltransferase complex","type":"broad"},{"name":"methyl-H4MPT","type":"broad"}],"termid":"GO:0044677"}


id: PBO:0047741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 4","termid":"PBO:0047741"}


id: MONDO:0006688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An occupational lung disorder caused by exposure to cotton dust. It occurs more commonly in workers in the textile industry. Signs and symptoms include chest tightness, cough and wheezing. The symptoms tend to get worse at the beginning of the week and subside by the end of the week.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"byssinosis","secondary_identifiers":["EFO:1000851","MEDGEN:2769","NCIT:C84605","UMLS:C0006542","GARD:5976","MedDRA:10006822","ICD9:504","ICD10CM:J66.0","SCTID:13151001","DOID:10323","MESH:D002095"],"synonyms":[{"name":"Monday morning fever","type":"related"},{"name":"cotton dust pneumoconiosis","type":"exact"},{"name":"cotton mill fever","type":"exact"},{"name":"flax-dressers' disease","type":"exact"},{"name":"pneumoconiosis from cotton dust","type":"exact"},{"name":"stripper's asthma","type":"exact"},{"name":"textile worker's lung","type":"narrow"}],"termid":"MONDO:0006688","xrefs":{"Monarch":{"xref_id":"0006688"}}}


id: GO:0072660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location in the plasma membrane, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in membrane","termid":"GO:0072658"},{"relation_name":"part_of","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in plasma membrane","termid":"GO:0072660"}


id: GO:1901028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"mitochondrial outer membrane permeabilization","termid":"GO:0097345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0007005","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway","synonyms":[{"name":"regulation of MOMP","type":"exact"},{"name":"regulation of mitochondrial outer membrane permeabilization","type":"broad"}],"termid":"GO:1901028"}


id: PBO:0078520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 10","termid":"PBO:0078520"}


id: GO:0034267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"discadenine metabolic process","synonyms":[{"name":"discadenine metabolism","type":"exact"}],"termid":"GO:0034267"}


id: PBO:0068398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF216 intronic transcript 1","termid":"PBO:0068398"}


id: PBO:0087297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single-stranded DNA endonuclease (with Rad1p); cleaves single-stranded DNA during nucleotide excision repair and double-strand break repair; subunit of Nucleotide Excision Repair Factor 1 (NEF1); homolog of human ERCC1 protein","termid":"PBO:0087297"}


id: MONDO:1011738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal metatarsal fistula, non-human animal","secondary_identifiers":["OMIA:000389"],"termid":"MONDO:1011738","xrefs":{"Monarch":{"xref_id":"1011738"}}}


id: PBO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.41","termid":"PBO:0000723"}


id: GO:1903602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thermospermine.","definition_xrefs":["GOC:TermGenie","PMID:24906355","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"thermospermine metabolic process","termid":"GO:1903601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermospermine catabolic process","synonyms":[{"name":"thermospermine breakdown","type":"exact"},{"name":"thermospermine catabolism","type":"exact"},{"name":"thermospermine degradation","type":"exact"}],"termid":"GO:1903602"}


id: GO:0035733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a hepatic stellate cell resulting from exposure to a cytokine, chemokine, hormone, cellular ligand or soluble factor.","definition_xrefs":["GOC:bf","CL:0000632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast activation","termid":"GO:0072537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic stellate cell activation","termid":"GO:0035733"}


id: FYPO:0002864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 5-fluoroorotic acid than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to 5-fluoroorotic acid","synonyms":[{"name":"resistance to 5-FOA","type":"exact"},{"name":"resistance to 5-fluoroorotic acid during mitotic cell cycle","type":"related"},{"name":"resistance to 5-fluoroorotic acid during vegetative growth","type":"exact"},{"name":"resistant to 5-fluoroorotic acid","type":"exact"}],"termid":"FYPO:0002864"}


id: FYPO:0005631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of protein degradation during vegetative growth","synonyms":[{"name":"decreased rate of protein breakdown during vegetative growth","type":"exact"},{"name":"decreased rate of protein catabolic process during vegetative growth","type":"exact"},{"name":"decreased rate of protein catabolism during vegetative growth","type":"exact"},{"name":"decreased rate of protein degradation during mitotic cell cycle","type":"related"},{"name":"reduced rate of protein degradation","type":"exact"}],"termid":"FYPO:0005631"}


id: PBO:0085102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein putative transcription factor; required for growth of superficial pseudohyphae (which do not invade the agar substrate) but not for invasive pseudohyphal growth; may act together with Phd1p; potential Cdc28p substrate","termid":"PBO:0085102"}


id: GO:0075080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075080)","termid":"GO:0075080"}


id: MONDO:1012768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cancer that occurs in crab-eating macaques due to a mutation in the TP53 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, TP53-related, crab-eating macaque","secondary_identifiers":["OMIA:001990-9541"],"termid":"MONDO:1012768","xrefs":{"Monarch":{"xref_id":"1012768"}}}


id: PBO:0057926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3651","termid":"PBO:0057926"}


id: MONDO:1010782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alopecia areata that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia areata, non-human animal","termid":"MONDO:1010140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia areata, cattle","secondary_identifiers":["OMIA:001702-9913"],"termid":"MONDO:1010782","xrefs":{"Monarch":{"xref_id":"1010782"}}}


id: PBO:0081128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFHX4 antisense RNA 1","termid":"PBO:0081128"}


id: PBO:0072340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 26","termid":"PBO:0072340"}


id: MONDO:0009372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encephalopathy due to hydroxykynureninuria is characterized by psychomotor retardation and nonprogressive encephalopathy associated with urinary excretion of large amounts of kynurenine, 3-hydroxykynurenine, and xanthurenic acid. It has been described in less than 30 patients. Other manifestations may include muscular hypertonia, headaches and stereotyped gestures. This disorder is transmitted as an autosomal recessive trait. It is caused by a defect in kynureninase, an enzyme of the tryptophane catabolic pathway.","definition_xrefs":["Orphanet:79155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of tryptophan metabolism","termid":"MONDO:0017350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"encephalopathy due to hydroxykynureninuria","secondary_identifiers":["SCTID:72945002","icd11.foundation:1145853843","MEDGEN:78681","MESH:C536081","UMLS:C0268474","OMIM:236800","ICD9:270.2","DOID:0112257","GARD:10039"],"synonyms":[{"name":"Xanthurenic aciduria","type":"exact"},{"name":"hydroxykynureninuria","type":"related"},{"name":"kynureninase deficiency","type":"exact"},{"name":"kynureninase deficiency, partial","type":"related"}],"termid":"MONDO:0009372","xrefs":{"Monarch":{"xref_id":"0009372"}}}


id: GO:0061006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation that contributes to the shaping of the kidney.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in kidney morphogenesis","termid":"GO:0061006"}


id: GO:0005896
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexameric protein complex consisting of two molecules each of interleukin-6, interleukin-6 receptor alpha chain, and gp-130.","definition_xrefs":["PMID:8083235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"interleukin-6 receptor complex","synonyms":[{"name":"IL-6 receptor complex","type":"exact"}],"termid":"GO:0005896"}


id: PBO:0028227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_alpha,alpha-trehalase_activity","termid":"PBO:0028227"}


id: PBO:0054785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2198","termid":"PBO:0054785"}


id: MOD:01041
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a benzyloxycarbonyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzyloxycarbonyl modified residue","synonyms":[{"name":"Z","type":"exact"}],"termid":"MOD:01041"}


id: PBO:0081375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF213 antisense RNA 1 (head to head)","termid":"PBO:0081375"}


id: PBO:0111935
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family","termid":"PBO:0111935"}


id: GO:0070469
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The protein complexes that form the electron transport system (the respiratory chain), associated with a cell membrane, usually the plasma membrane (in prokaryotes) or the inner mitochondrial membrane (on eukaryotes). The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.","definition_xrefs":["GOC:ecd","GOC:mah","ISBN:0198547684","Wikipedia:Respirasome"],"gene_count":0,"genotype_count":0,"name":"obsolete respirasome (obsolete GO:0070469)","synonyms":[{"name":"membrane electron transport chain","type":"exact"},{"name":"respiratory chain","type":"exact"}],"termid":"GO:0070469"}


id: PBO:0059752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 26","termid":"PBO:0059752"}


id: PBO:0039296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG10 alpha-1,2-glucosyltransferase B","termid":"PBO:0039296"}


id: PBO:0045066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 5","termid":"PBO:0045066"}


id: MONDO:0016680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anaplastic astrocytoma (grade III astrocytic tumor) or glioblastoma (grade IV astrocytic tumor).","definition_xrefs":["NCIT:C102897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"high grade astrocytic tumor","secondary_identifiers":["GARD:20704","Orphanet:251561","MEDGEN:769639","UMLS:C3640999"],"synonyms":[{"name":"high grade astrocytic neoplasm","type":"exact"},{"name":"high grade astrocytic tumor","type":"exact"},{"name":"high-grade astrocytic neoplasm","type":"exact"},{"name":"high-grade astrocytic tumor","type":"exact"},{"name":"high-grade astrocytic tumour","type":"exact"},{"name":"high-grade astrocytoma","type":"related"}],"termid":"MONDO:0016680","xrefs":{"Monarch":{"xref_id":"0016680"}}}


id: GO:0044032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of indole acetic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of indole acetic acid levels in host (obsolete GO:0044032)","synonyms":[{"name":"modulation by symbiont of IAA levels in host","type":"exact"},{"name":"modulation by symbiont of auxin levels in host","type":"broad"}],"termid":"GO:0044032"}


id: PBO:0002357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine phosphoribosyltransferase (APRT) (predicted)","termid":"PBO:0002357"}


id: GO:0048496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of an animal organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of animal organ identity","termid":"GO:0048496"}


id: FYPO:0001821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a greater than normal number of cells in an originally homothallic (h90) population express P-specific information from the mat1 locus.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased number of heterothallic h+ cells","synonyms":[{"name":"increased amount of heterothallic H+ cells","type":"exact"}],"termid":"FYPO:0001821"}


id: PBO:0080078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 40","termid":"PBO:0080078"}


id: GO:0004707
data:
  {"annotated_genes":["SJAG_04551","SJAG_02923","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63775,66611,76479],"is_not":false,"summary":null,"term":"GO:0004707"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein + ATP = protein phosphate + ADP. This reaction is the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli.","definition_xrefs":["GOC:ma","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02923":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0140096","GO:0003674","GO:0004672","GO:0016740"],"is_obsolete":false,"name":"MAP kinase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0016908","Reactome:R-HSA-5654565","GO:0008338","MetaCyc:2.7.11.24-RXN","Reactome:R-HSA-9626832","GO:0008339","Reactome:R-HSA-5654560","Reactome:R-HSA-198733","Reactome:R-HSA-111898","EC:2.7.11.24","Reactome:R-HSA-445079","Reactome:R-HSA-5654562","Reactome:R-HSA-9825759","GO:0016909","Reactome:R-HSA-73722","Reactome:R-HSA-5654566","KEGG_REACTION:R00162"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKK-activated) activity","type":"related"},{"name":"ERK","type":"related"},{"name":"ERK1","type":"exact"},{"name":"ERK2","type":"related"},{"name":"MAP kinase 1 activity","type":"narrow"},{"name":"MAP kinase 2 activity","type":"narrow"},{"name":"MAPK","type":"related"},{"name":"MBP kinase I activity","type":"narrow"},{"name":"MBP kinase II activity","type":"narrow"},{"name":"SAP kinase activity","type":"narrow"},{"name":"SAPK","type":"narrow"},{"name":"extracellular signal-regulated kinase activity","type":"narrow"},{"name":"mitogen activated kinase activity","type":"exact"},{"name":"mitogen-activated protein kinase activity","type":"related"},{"name":"myelin basic protein kinase activity","type":"narrow"},{"name":"stress-activated kinase activity","type":"narrow"},{"name":"stress-activated protein kinase activity","type":"narrow"}],"termid":"GO:0004707","terms_by_termid":{"GO:0004707":null}}


id: PBO:0091239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zn(2)-C6 fungal-type, truncated","termid":"PBO:0091239"}


id: PBO:0055851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 1B","termid":"PBO:0055851"}


id: PBO:0085377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane arginine permease; requires phosphatidyl ethanolamine (PE) for localization, exclusively associated with lipid rafts; mutation confers canavanine resistance; CAN1 has a paralog, ALP1, that arose from the whole genome duplication","termid":"PBO:0085377"}


id: PBO:0041908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalamin binding intrinsic factor","termid":"PBO:0041908"}


id: MONDO:0036781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the structures of the axilla.","definition_xrefs":["NCIT:C35750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"axillary neoplasm","termid":"MONDO:0036779"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign axillary neoplasm","secondary_identifiers":["UMLS:C0684828","MEDGEN:146338"],"synonyms":[{"name":"axillary neoplasm, benign","type":"exact"},{"name":"benign axillary neoplasm","type":"exact"}],"termid":"MONDO:0036781","xrefs":{"Monarch":{"xref_id":"0036781"}}}


id: MONDO:1012428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complement component 4 deficiency, non-human animal","termid":"MONDO:1011730"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4 deficiency, domestic guinea pig","secondary_identifiers":["OMIA:001626-10141"],"synonyms":[{"name":"C4 deficiency, domestic guinea pig","type":"exact"}],"termid":"MONDO:1012428","xrefs":{"Monarch":{"xref_id":"1012428"}}}


id: PBO:0027564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_meiosis_II","termid":"PBO:0027564"}


id: MONDO:0014957
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89017],"is_not":false,"summary":null,"term":"MONDO:0014957"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"is_obsolete":false,"name":"language delay and attention deficit-hyperactivity disorder/cognitive impairment with or without cardiac arrhythmia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310678","OMIM:617182","MEDGEN:934645"],"synonyms":[{"name":"LADCI","type":"exact"},{"name":"language delay and ADHD/cognitive impairment with or without cardiac arrhythmia","type":"exact"},{"name":"language delay and attention Deficit-hyperactivity disorder/cognitive impairment with or without Cardiac arrhythmia","type":"exact"},{"name":"language delay and attention deficit-hyperactivity disorder/cognitive impairment with or without cardiac arrhythmia; LADCI","type":"exact"}],"termid":"MONDO:0014957","terms_by_termid":{"MONDO:0014957":null},"xrefs":{"Monarch":{"xref_id":"0014957"}}}


id: GO:1903025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of RNA polymerase II regulatory region sequence-specific DNA binding.","definition_xrefs":["PMID:20026326","GOC:TermGenie","GOC:krc","GOC:dph","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of RNA polymerase II regulatory region sequence-specific DNA binding","termid":"GO:1903025"}


id: MONDO:0018520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare epithelial tumor of pancreas (obsolete MONDO:0018520)","secondary_identifiers":["Orphanet:424033"],"synonyms":[{"name":"rare pancreatic epithelial tumor","type":"exact"}],"termid":"MONDO:0018520","xrefs":{"Monarch":{"xref_id":"0018520"}}}


id: PBO:0036533
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ3","termid":"PBO:0036533"}


id: PBO:0039736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein E","termid":"PBO:0039736"}


id: GO:0042671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a retinal cone cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate determination","termid":"GO:0043703"},{"relation_name":"part_of","term_name":"retinal cone cell fate commitment","termid":"GO:0046551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell fate determination","termid":"GO:0042671"}


id: PBO:0109022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gfo/Idh/MocA-like oxidoreductase domain containing 2","termid":"PBO:0109022"}


id: PR:A6X977
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.13 gene.","definition_xrefs":["UniProtKB:A6X977","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.13","synonyms":[{"name":"Spom972h-SPAC27E2.13","type":"exact"}],"termid":"PR:A6X977"}


id: PBO:0083567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ERV46/YAL042W; YAL042C-A is a non-essential gene","termid":"PBO:0083567"}


id: PBO:0047102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 153 member A","termid":"PBO:0047102"}


id: GO:0060715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chorionic trophoblast cell acquires specialized features of a syncytiotrophoblast of the labyrinthine layer of the placenta.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"},{"relation_name":"part_of","term_name":"labyrinthine layer development","termid":"GO:0060711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"syncytiotrophoblast cell differentiation involved in labyrinthine layer development","termid":"GO:0060715"}


id: PBO:0057727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-11","termid":"PBO:0057727"}


id: FYPO:0002468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable, have a larger volume and are longer than normal in the vegetative growth phase of the life cycle. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable swollen elongated vegetative cell population (obsolete FYPO:0002468)","synonyms":[{"name":"inviable elongated cell population with increased cell volume","type":"exact"},{"name":"inviable elongated swollen population","type":"exact"},{"name":"inviable enlarged elongated cell population","type":"related"},{"name":"inviable large elongated cell population","type":"related"},{"name":"inviable swollen long vegetative cell population","type":"exact"}],"termid":"FYPO:0002468"}


id: GO:0045591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of differentiation of regulatory T cells.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"regulation of regulatory T cell differentiation","termid":"GO:0045589"},{"relation_name":"positively_regulates","term_name":"regulatory T cell differentiation","termid":"GO:0045066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of regulatory T cell differentiation","synonyms":[{"name":"activation of regulatory T cell differentiation","type":"narrow"},{"name":"positive regulation of regulatory T cell development","type":"related"},{"name":"positive regulation of regulatory T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of regulatory T-cell differentiation","type":"exact"},{"name":"positive regulation of regulatory T-lymphocyte differentiation","type":"exact"},{"name":"positive regulation of suppressor T cell differentiation","type":"exact"},{"name":"positive regulation of suppressor T-cell differentiation","type":"exact"},{"name":"stimulation of regulatory T cell differentiation","type":"narrow"},{"name":"up regulation of regulatory T cell differentiation","type":"exact"},{"name":"up-regulation of regulatory T cell differentiation","type":"exact"},{"name":"upregulation of regulatory T cell differentiation","type":"exact"}],"termid":"GO:0045591"}


id: PBO:0005411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-C (predicted)","termid":"PBO:0005411"}


id: PBO:0069244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 499, pseudogene","termid":"PBO:0069244"}


id: FYPO:0000933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"decreased protein localisation to microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"decreased protein localization to microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to microtubule cytoskeleton during vegetative growth","type":"exact"}],"termid":"FYPO:0000933"}


id: GO:0070145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling asparagine to asparaginyl-tRNA in a mitochondrion, catalyzed by asparaginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparaginyl-tRNA aminoacylation","termid":"GO:0006421"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0140053","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"mitochondrial asparaginyl-tRNA aminoacylation","termid":"GO:0070145"}


id: PBO:0066775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 73","termid":"PBO:0066775"}


id: RO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connecting_branch_of","termid":"RO:0002252"}


id: FYPO:0001774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the eisosome filament is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to eisosome filament","synonyms":[{"name":"abnormal protein localisation to eisosome filament","type":"exact"},{"name":"abnormal protein localization to eisosome filament during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to eisosome filament during vegetative growth","type":"exact"},{"name":"abnormal protein localization to linear eisosome","type":"exact"}],"termid":"FYPO:0001774"}


id: PBO:0003863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc4","termid":"PBO:0003863"}


id: PBO:0044367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, testis, pseudogene","termid":"PBO:0044367"}


id: GO:0015967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diadenosine tetraphosphate, a derivative of the nucleoside adenosine with four phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate catabolic process","termid":"GO:0015961"},{"relation_name":"is_a","term_name":"diadenosine tetraphosphate metabolic process","termid":"GO:0015965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"diadenosine tetraphosphate catabolic process","synonyms":[{"name":"diadenosine tetraphosphate breakdown","type":"exact"},{"name":"diadenosine tetraphosphate catabolism","type":"exact"},{"name":"diadenosine tetraphosphate degradation","type":"exact"}],"termid":"GO:0015967"}


id: PR:Q09845
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase [NAD(+)] 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.04c","synonyms":[{"name":"Spom972h-gpd2","type":"exact"}],"termid":"PR:Q09845"}


id: PBO:0081391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF230 divergent transcript","termid":"PBO:0081391"}


id: MONDO:0958085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare subtype of hemochromatosis characterized by the combination of pathogenic variants in two genes involved in iron metabolism (usually a combination of HFE and non-HFE mutations), where the classical HFE-related hemochromatosis is not enough to fully explain the clinical picture of the patient.","definition_xrefs":["Orphanet:648581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemochromatosis","termid":"MONDO:0006507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"digenic hemochromatosis","secondary_identifiers":["UMLS:C5816744","MEDGEN:1853200"],"termid":"MONDO:0958085","xrefs":{"Monarch":{"xref_id":"0958085"}}}


id: FYPO:0008127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype where a ribosome is mislocalized to the nucleoplasm in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"ribosome mislocalized to nucleoplasm","termid":"FYPO:0008127"}


id: PBO:0080001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase10 pseudogene 2","termid":"PBO:0080001"}


id: GO:2000528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myeloid dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dendritic cell chemotaxis","termid":"GO:2000509"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell chemotaxis","termid":"GO:2000527"},{"relation_name":"negatively_regulates","term_name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid dendritic cell chemotaxis","termid":"GO:2000528"}


id: PBO:0045109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMD antisense RNA 3","termid":"PBO:0045109"}


id: MOD:01203
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-[(pyrid-3-yl)acetyl]lysine.","definition_xrefs":["Unimod:25#K","PubMed:9276974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridylacetylated residue","termid":"MOD:00418"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(pyridylacetyl)lysine","synonyms":[{"name":"Pyridylacetyl","type":"related"},{"name":"pyridylacetyl","type":"related"}],"termid":"MOD:01203"}


id: PBO:0085607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in control of glucose-regulated gene expression; interacts with kinase Snf1p, glucose sensors Snf3p and Rgt2p, TATA-binding Spt15p; regulator of transcription factor Rgt1p; interactions with Pma1p appear to propagate [GAR+]; STD1 has a paralog, MTH1, that arose from the whole genome duplication","termid":"PBO:0085607"}


id: PBO:0081539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 451","termid":"PBO:0081539"}


id: MONDO:0021163
data:
  {"annotated_genes":["SJAG_03677","SJAG_00440","SJAG_01144","SJAG_02231","SJAG_03787"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[87993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[88613,88611,88612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the kidney. Representative examples of benign renal neoplasms include fibroma, lipoma, oncocytoma, and juxtaglomerular cell tumor. Representative examples of malignant renal neoplasms include renal cell carcinoma, renal pelvis carcinoma, Wilms tumor, rhabdoid tumor, sarcoma, and lymphoma.","definition_xrefs":["NCIT:C3150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"urinary system neoplasm","termid":"MONDO:0021066"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_01144":null,"SJAG_02231":null,"SJAG_03677":null,"SJAG_03787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:KIDNEY","MEDGEN:5967","ICD9:239.5","UMLS:C0022665","EFO:0003865","SCTID:126880001"],"synonyms":[{"name":"kidney neoplasm","type":"exact"},{"name":"kidney neoplasm (disease)","type":"exact"},{"name":"kidney tumor","type":"exact"},{"name":"kidney tumour","type":"exact"},{"name":"neoplasm of kidney","type":"exact"},{"name":"neoplasm of the kidney","type":"exact"},{"name":"renal neoplasm","type":"exact"},{"name":"renal tumor","type":"exact"},{"name":"renal tumors","type":"exact"},{"name":"renal tumour","type":"exact"},{"name":"renal tumours","type":"exact"},{"name":"tumor of kidney","type":"exact"},{"name":"tumor of the kidney","type":"exact"},{"name":"tumour of kidney","type":"exact"},{"name":"tumour of the kidney","type":"exact"}],"termid":"MONDO:0021163","terms_by_termid":{"MONDO:0003789":null,"MONDO:0007763":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0021163"}}}


id: MONDO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hiatus hernia","termid":"MONDO:0007721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"displacement of cardia through esophageal hiatus","secondary_identifiers":["DOID:12641","SCTID:47028006","ICD10CM:Q40.1","UMLS:C0158674","MEDGEN:510622","ICD9:750.6"],"synonyms":[{"name":"congenital hiatus hernia","type":"exact"}],"termid":"MONDO:0001562","xrefs":{"Monarch":{"xref_id":"0001562"}}}


id: PBO:0049596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 14","termid":"PBO:0049596"}


id: PBO:0027648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_spheroid_vegetative_cell","termid":"PBO:0027648"}


id: PATO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's exhibiting repetition of placement of its parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatial pattern","secondary_identifiers":["PATO:0000132","PATO:0001565"],"synonyms":[{"name":"distribution","type":"exact"},{"name":"pattern","type":"related"}],"termid":"PATO:0000060"}


id: PBO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M20 protein","termid":"PBO:0004987"}


id: GO:0061215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephron in the mesonephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron development","termid":"GO:0061215"}


id: PBO:0080679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolf-Hirschhorn syndrome candidate 1-like 2, pseudogene","termid":"PBO:0080679"}


id: GO:0000307
data:
  {"annotated_genes":["SJAG_01213","SJAG_00973","SJAG_03618","SJAG_04368","SJAG_01401","SJAG_01149","SJAG_01716","SJAG_00901","SJAG_04140","SJAG_03525","SJAG_03421","SJAG_00100","SJAG_00758","SJAG_05978","SJAG_03206","SJAG_04420","SJAG_01000","SJAG_04614","SJAG_00150","SJAG_03061","SJAG_02057","SJAG_00439","SJAG_03699","SJAG_00512","SJAG_03591","SJAG_01207","SJAG_02404","SJAG_03967","SJAG_03048","SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71948,72305,73270,73317,75846,76755,78513,80080,80207,90046,106250,107632,108204,110314],"is_not":false,"summary":null,"term":"GO:0000307"},{"annotations":[97680,112890,81289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[110841,110998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"},{"annotations":[80526,71896,116827,72122,76163,94031,77951,110946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005675"},{"annotations":[61406,67350,78007],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"Cyclin-dependent protein kinases (CDKs) are enzyme complexes that contain a kinase catalytic subunit associated with a regulatory cyclin partner.","definition_xrefs":["PMID:11602261","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00150":null,"SJAG_00439":null,"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00973":null,"SJAG_00995":null,"SJAG_01000":null,"SJAG_01149":null,"SJAG_01207":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_01716":null,"SJAG_02057":null,"SJAG_02404":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03206":null,"SJAG_03421":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03618":null,"SJAG_03699":null,"SJAG_03967":null,"SJAG_04140":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04614":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin-dependent protein kinase holoenzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"CDK holoenzyme","type":"exact"}],"termid":"GO:0000307","terms_by_termid":{"GO:0000307":null,"GO:0005675":null,"GO:0070691":null,"GO:0070692":null,"GO:0070985":null}}


id: MONDO:0014208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease type 2 in which the cause of the disease is a mutation in the TRIM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2R","secondary_identifiers":["UMLS:C3809655","DOID:0110161","OMIM:615490","Orphanet:397968","GARD:12451","MEDGEN:815985"],"synonyms":[{"name":"CMT2R","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in TRIM2","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2R","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2R","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2R","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2R","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2R","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2R","type":"related"},{"name":"TRIM2 Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2R","type":"exact"}],"termid":"MONDO:0014208","xrefs":{"Monarch":{"xref_id":"0014208"}}}


id: PBO:0043492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 1","termid":"PBO:0043492"}


id: GO:0044327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Distal part of the dendritic spine, that carries the post-synaptic density.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine head","secondary_identifiers":["NIF_Subcellular:sao952643730"],"synonyms":[{"name":"spine head","type":"broad"}],"termid":"GO:0044327"}


id: PBO:0085044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential INO80 chromatin remodeling complex subunit; preferentially binds DNA ends, protecting them from exonucleatic cleavage; deletion affects telomere maintenance via recombination; related to mammalian high mobility group proteins","termid":"PBO:0085044"}


id: PBO:0086263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates telomeric length; protects telomeric ends in a complex with Cdc13p and Stn1p; similar to human Ten1 which is critical for the telomeric function of the CST (Cdc13p-Stn1p-Ten1p) complex","termid":"PBO:0086263"}


id: PBO:0040767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3 pseudogene 2","termid":"PBO:0040767"}


id: PBO:0054994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2409","termid":"PBO:0054994"}


id: MONDO:1011315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorder of orbital region that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315","xrefs":{"Monarch":{"xref_id":"1011315"}}}


id: GO:2001111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lens epithelial cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of lens epithelial cell proliferation","termid":"GO:2001109"},{"relation_name":"positively_regulates","term_name":"lens epithelial cell proliferation","termid":"GO:0097166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lens epithelial cell proliferation","termid":"GO:2001111"}


id: GO:0018084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of N-terminal peptidyl-serine to lactic acid.","definition_xrefs":["RESID:AA0186"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lactic acid biosynthetic process from peptidyl-serine (obsolete GO:0018084)","synonyms":[{"name":"peptidyl-lactic acid anabolism from peptidyl-serine","type":"exact"},{"name":"peptidyl-lactic acid formation from peptidyl-serine","type":"exact"},{"name":"peptidyl-lactic acid synthesis from peptidyl-serine","type":"exact"}],"termid":"GO:0018084"}


id: MONDO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anxiety disorder characterized by an intense, irrational fear of venturing out into open places or situations in which help (or escape) might not be available should excessive anxiety or panic symptoms develop.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phobic disorder","termid":"MONDO:0003699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agoraphobia","secondary_identifiers":["ICD10CM:F40.0","NCIT:C34362","SCTID:70691001","icd11.foundation:530592394","MESH:D000379","UMLS:C0001818","MEDGEN:175","DOID:593","EFO:1001872"],"synonyms":[{"name":"fear of open spaces","type":"exact"},{"name":"fear of open spaces (finding)","type":"exact"}],"termid":"MONDO:0003709","xrefs":{"Monarch":{"xref_id":"0003709"}}}


id: SO:1000009
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into an other pyrimidine nucleotide, or change of a purine nucleotide, A or G, into an other purine nucleotide.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNV","termid":"SO:0001483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transition","termid":"SO:1000009"}


id: PBO:0026989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_membrane_potential","termid":"PBO:0026989"}


id: PBO:0001596
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"destabilized in the absence of Pcf1","termid":"PBO:0001596"}


id: PBO:0060013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 1","termid":"PBO:0060013"}


id: GO:1905907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amyloid fibril formation.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:23106396","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"is_a","term_name":"regulation of amyloid fibril formation","termid":"GO:1905906"},{"relation_name":"negatively_regulates","term_name":"amyloid fibril formation","termid":"GO:1990000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amyloid fibril formation","synonyms":[{"name":"down regulation of amyloid fibril assembly","type":"related"},{"name":"down regulation of amyloid fibril formation","type":"exact"},{"name":"down regulation of amyloid structure assembly","type":"related"},{"name":"down regulation of amyloid structure formation","type":"related"},{"name":"down-regulation of amyloid fibril assembly","type":"related"},{"name":"down-regulation of amyloid fibril formation","type":"exact"},{"name":"down-regulation of amyloid structure assembly","type":"related"},{"name":"down-regulation of amyloid structure formation","type":"related"},{"name":"downregulation of amyloid fibril assembly","type":"related"},{"name":"downregulation of amyloid fibril formation","type":"exact"},{"name":"downregulation of amyloid structure assembly","type":"related"},{"name":"downregulation of amyloid structure formation","type":"related"},{"name":"inhibition of amyloid fibril assembly","type":"related"},{"name":"inhibition of amyloid fibril formation","type":"narrow"},{"name":"inhibition of amyloid structure assembly","type":"related"},{"name":"inhibition of amyloid structure formation","type":"related"},{"name":"negative regulation of amyloid fibril assembly","type":"related"},{"name":"negative regulation of amyloid structure assembly","type":"related"},{"name":"negative regulation of amyloid structure formation","type":"related"}],"termid":"GO:1905907"}


id: GO:0010812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:tb","GOC:pf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"negatively_regulates","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"}


id: MONDO:0009746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary sensory and autonomic neuropathy, type 4 (HSAN4) is an inherited disorder characterized by anhidrosis, insensitivity to pain, self-mutilating behavior and episodes of fever.","definition_xrefs":["Orphanet:642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy type 4","secondary_identifiers":["OMIM:256800","icd11.foundation:1831234152","NANDO:1200553","DOID:0070146","MEDGEN:6915","NCIT:C118633","NANDO:2200854","PMID:8696348","SCTID:62985007","PMID:14272277","GARD:3006","NORD:1236","UMLS:C0020074"],"synonyms":[{"name":"CIP-anhidrosis syndrome","type":"exact"},{"name":"CIPA","type":"related"},{"name":"HSAN 4","type":"related"},{"name":"HSAN IV","type":"related"},{"name":"HSAN4","type":"exact"},{"name":"HSNAN4","type":"related"},{"name":"Hereditary Sensory and Autonomic Neuropathy Type IV","type":"exact"},{"name":"NTRK1 hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"congenital insensitivity to pain with anhidrosis","type":"exact"},{"name":"congenital insensitivity to pain-anhidrosis syndrome","type":"exact"},{"name":"familial dysautonomia, type 2","type":"related"},{"name":"hereditary sensory and autonomic neuropathy 4","type":"related"},{"name":"hereditary sensory and autonomic neuropathy caused by mutation in NTRK1","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type IV","type":"exact"},{"name":"hereditary sensory neuropathy type 4","type":"related"},{"name":"hereditary sensory neuropathy type IV","type":"exact"},{"name":"insensitivity to pain, congenital, with anhidrosis","type":"exact"},{"name":"neuropathy, congenital sensory, with anhidrosis","type":"related"}],"termid":"MONDO:0009746","xrefs":{"Monarch":{"xref_id":"0009746"}}}


id: PBO:0078667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-2","termid":"PBO:0078667"}


id: FYPO:0006429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in subtelomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at subtelomeres during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"normal histone H3K9me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006429"}


id: PBO:0049893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 3","termid":"PBO:0049893"}


id: MONDO:0002898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the zone of skin","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system cancer","termid":"MONDO:0000653"},{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin cancer","secondary_identifiers":["MEDGEN:40101","DOID:4159","SCTID:372130007","ICD10CM:C43-C44","ICD9:173.8","UMLS:C0007114","ICD9:173.9","NCIT:C2920"],"synonyms":[{"name":"CA - skin cancer","type":"exact"},{"name":"cancer of skin","type":"related"},{"name":"cancer of zone of skin","type":"exact"},{"name":"malignant neoplasm of skin","type":"exact"},{"name":"malignant neoplasm of the skin","type":"exact"},{"name":"malignant neoplasm of zone of skin","type":"exact"},{"name":"malignant skin neoplasm","type":"exact"},{"name":"malignant skin tumor","type":"exact"},{"name":"malignant skin tumour","type":"exact"},{"name":"malignant tumor of skin","type":"exact"},{"name":"malignant tumor of the skin","type":"exact"},{"name":"malignant tumour of skin","type":"exact"},{"name":"malignant tumour of the skin","type":"exact"},{"name":"malignant zone of skin neoplasm","type":"exact"},{"name":"melanoma and non-melanoma skin cancer","type":"exact"},{"name":"skin cancer","type":"exact"},{"name":"skin cancer, Including melanoma","type":"exact"},{"name":"skin neoplasm, malignant","type":"exact"},{"name":"zone of skin cancer","type":"exact"}],"termid":"MONDO:0002898","xrefs":{"Monarch":{"xref_id":"0002898"}}}


id: MONDO:0003868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the anterior foramen magnum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foramen magnum meningioma","termid":"MONDO:0003109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior foramen magnum meningioma","secondary_identifiers":["UMLS:C1332302","DOID:6381","MEDGEN:233988","NCIT:C5281"],"synonyms":[{"name":"meningioma of anterior Foramen magnum","type":"exact"},{"name":"meningioma of the anterior Foramen magnum","type":"exact"}],"termid":"MONDO:0003868","xrefs":{"Monarch":{"xref_id":"0003868"}}}


id: PBO:0075971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 13","termid":"PBO:0075971"}


id: MONDO:0012486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preauricular tag, isolated, autosomal dominant, 1","secondary_identifiers":["MEDGEN:369878","OMIM:610420","MESH:C566904","UMLS:C1968893"],"synonyms":[{"name":"preauricular Tag, isolated, autosomal dominant, type 1","type":"exact"},{"name":"preauricular tag, isolated, autosomal dominant, 1","type":"exact"}],"termid":"MONDO:0012486","xrefs":{"Monarch":{"xref_id":"0012486"}}}


id: MONDO:0020379
data:
  {"annotated_genes":["SJAG_04567","SJAG_03815","SJAG_02919"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88749,88747,88748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013411"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset partial cataract","termid":"MONDO:0020377"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset zonular cataract","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842642","MESH:C535342","Orphanet:98995","GARD:1898","UMLS:C5681642"],"termid":"MONDO:0020379","terms_by_termid":{"MONDO:0013411":null},"xrefs":{"Monarch":{"xref_id":"0020379"}}}


id: GO:0072730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a papulacandin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to papulacandin B","termid":"GO:0072730"}


id: MONDO:0010262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotonia, congenital nystagmus, ataxia, and abnormal auditory brainstem responses","secondary_identifiers":["OMIM:300184","UMLS:C1970936","MESH:C537159","MEDGEN:373521"],"synonyms":[{"name":"hypotonia, congenital nystagmus, ataxia and abnormal auditory brainstem response","type":"related"},{"name":"hypotonia, congenital nystagmus, ataxia, and abnormal auditory brainstem responses","type":"exact"}],"termid":"MONDO:0010262","xrefs":{"Monarch":{"xref_id":"0010262"}}}


id: MONDO:0957821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 88","secondary_identifiers":["MEDGEN:1845113","DOID:0070587","OMIM:620547","UMLS:C5882706"],"termid":"MONDO:0957821","xrefs":{"Monarch":{"xref_id":"0957821"}}}


id: MONDO:0024545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Miyoshi myopathy in which the cause of the disease is a mutation in the DYSF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Miyoshi myopathy","termid":"MONDO:0009685"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of dysferlin","termid":"MONDO:0016145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Miyoshi muscular dystrophy 1","secondary_identifiers":["DOID:0070199","UMLS:C4551973","MEDGEN:1640757","OMIM:254130"],"synonyms":[{"name":"DYSF Miyoshi myopathy","type":"exact"},{"name":"MIYOSHI muscular dystrophy 1","type":"related"},{"name":"MMD1","type":"related"},{"name":"Miyoshi myopathy","type":"related"},{"name":"Miyoshi myopathy caused by mutation in DYSF","type":"exact"},{"name":"muscular dystrophy, distal, late-onset, autosomal recessive","type":"related"}],"termid":"MONDO:0024545","xrefs":{"Monarch":{"xref_id":"0024545"}}}


id: GO:0015759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Beta-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in a beta configuration.","definition_xrefs":["PMID:3034860","PMID:6756954","GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transport","termid":"GO:0042946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"beta-glucoside transport","termid":"GO:0015759"}


id: PBO:0079269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39B","termid":"PBO:0079269"}


id: GO:1905203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of connective tissue replacement.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25590961","GOC:BHF_miRNA","GOC:BHF","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"connective tissue replacement","termid":"GO:0097709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of connective tissue replacement","termid":"GO:1905203"}


id: PBO:0072957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sciellin","termid":"PBO:0072957"}


id: PBO:0070117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 31 pseudogene","termid":"PBO:0070117"}


id: PBO:0030086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_glutathione","termid":"PBO:0030086"}


id: PBO:0074561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 15","termid":"PBO:0074561"}


id: PBO:0071198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 39","termid":"PBO:0071198"}


id: PBO:0071948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS4Y1 pseudogene 1","termid":"PBO:0071948"}


id: GO:0008201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to heparin, a member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heparin binding","synonyms":[{"name":"heparan sulfate binding","type":"related"}],"termid":"GO:0008201"}


id: MONDO:0003660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"adult lymphoma","secondary_identifiers":["DOID:5825","NANDO:2100004","NCIT:C7587","UMLS:C1332206","MEDGEN:233965"],"synonyms":[{"name":"adult lymphoma","type":"exact"},{"name":"lymphoma","type":"broad"},{"name":"lymphoma of adults","type":"exact"}],"termid":"MONDO:0003660","xrefs":{"Monarch":{"xref_id":"0003660"}}}


id: FYPO:0000416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation begins before anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000337","FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"premature mitotic sister chromatid separation","synonyms":[{"name":"advanced mitotic sister chromatid separation","type":"exact"},{"name":"chromosome segregation: premature","type":"broad"},{"name":"premature chromosome separation during vegetative growth","type":"exact"},{"name":"premature mitotic chromosome separation","type":"exact"},{"name":"premature sister chromatid separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000416"}


id: GO:1903380
data:
  {"annotated_genes":["SJAG_03048","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104297,118682],"is_not":false,"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic chromosome condensation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:9490640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of mitotic chromosome condensation","termid":"GO:1903379"},{"relation_name":"is_a","term_name":"positive regulation of chromosome condensation","termid":"GO:1905821"},{"relation_name":"positively_regulates","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic chromosome condensation","type":"narrow"},{"name":"up regulation of mitotic chromosome condensation","type":"exact"},{"name":"up-regulation of mitotic chromosome condensation","type":"exact"},{"name":"upregulation of mitotic chromosome condensation","type":"exact"}],"termid":"GO:1903380","terms_by_termid":{"GO:1903380":null}}


id: PBO:0051351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-1 (pseudogene)","termid":"PBO:0051351"}


id: PBO:0063125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 10","termid":"PBO:0063125"}


id: PBO:0044914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DGAT2 divergent transcript","termid":"PBO:0044914"}


id: MONDO:0000731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peeling skin syndrome (obsolete MONDO:0000731)","termid":"MONDO:0000731","xrefs":{"Monarch":{"xref_id":"0000731"}}}


id: GO:1905800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intraciliary retrograde transport.","definition_xrefs":["GO_REF:0000058","PMID:27930654","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of intraciliary retrograde transport","termid":"GO:1905799"},{"relation_name":"negatively_regulates","term_name":"intraciliary retrograde transport","termid":"GO:0035721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intraciliary retrograde transport","synonyms":[{"name":"down regulation of intraciliary retrograde transport","type":"exact"},{"name":"down regulation of intraflagellar retrograde transport","type":"exact"},{"name":"down-regulation of intraciliary retrograde transport","type":"exact"},{"name":"down-regulation of intraflagellar retrograde transport","type":"exact"},{"name":"downregulation of intraciliary retrograde transport","type":"exact"},{"name":"downregulation of intraflagellar retrograde transport","type":"exact"},{"name":"inhibition of intraciliary retrograde transport","type":"narrow"},{"name":"inhibition of intraflagellar retrograde transport","type":"narrow"},{"name":"negative regulation of intraflagellar retrograde transport","type":"exact"}],"termid":"GO:1905800"}


id: GO:0098946
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endocytic zone membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic endocytic zone membrane (obsolete GO:0098946)","synonyms":[{"name":"intrinsic to presynaptic active zone membrane","type":"narrow"}],"termid":"GO:0098946"}


id: MONDO:0010105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pineal region teratoma","termid":"MONDO:0004015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratoma, pineal","secondary_identifiers":["UMLS:C1848902","MEDGEN:336449","MESH:C537401","OMIM:273120"],"synonyms":[{"name":"teratoma, pineal","type":"exact"}],"termid":"MONDO:0010105","xrefs":{"Monarch":{"xref_id":"0010105"}}}


id: GO:0006438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. The valyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a valine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"valyl-tRNA aminoacylation","termid":"GO:0006438"}


id: MONDO:0007719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diaphragmatic hernia","termid":"MONDO:0005711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic hernia 1","secondary_identifiers":["UMLS:C1840643","MEDGEN:327154","OMIM:142340"],"synonyms":[{"name":"DIH1","type":"related"},{"name":"diaphragm, complete agenesis of","type":"related"},{"name":"diaphragm, unilateral agenesis of","type":"related"},{"name":"diaphragmatic defect, congenital","type":"related"},{"name":"diaphragmatic hernia, congenital","type":"related"},{"name":"diaphragmatic hernia, congenital 1","type":"exact"},{"name":"hemidiaphragm, agenesis of","type":"related"},{"name":"hernia, congenital diaphragmatic","type":"related"},{"name":"hernia, congenital diaphragmatic 1","type":"exact"}],"termid":"MONDO:0007719","xrefs":{"Monarch":{"xref_id":"0007719"}}}


id: PBO:0078109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator of GLUT4 (SLC2A4) 1","termid":"PBO:0078109"}


id: PR:Q9US52
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere bouquet protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.06c","synonyms":[{"name":"Spom972h-bqt2","type":"exact"},{"name":"meiotic chromosome segregation protein bqt2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 18 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US52"}


id: PBO:0057960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3681 host gene","termid":"PBO:0057960"}


id: PBO:0078650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 3-1","termid":"PBO:0078650"}


id: PBO:0070262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U12 small nuclear","termid":"PBO:0070262"}


id: PBO:0089241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human coilin ortholog Mug174","termid":"PBO:0089241"}


id: PBO:0018130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain endoplasmic reticulum membrane organization protein (predicted)","termid":"PBO:0018130"}


id: MONDO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of uterine corpus leiomyoma. Macroscopically, it is characterized by large, fungating, and multinodular neoplasm masses arising from the uterine corpus, and extending into the broad ligament or the peritoneal cavity. Microscopically, it shows neoplastic smooth muscle cells infiltrating the myometrium. The neoplastic cells are arranged in a micronodular pattern. Hydropic changes and increased vascularity are also present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus dissecting leiomyoma","secondary_identifiers":["DOID:13953","MEDGEN:275552","NCIT:C40172","UMLS:C1519847"],"synonyms":[{"name":"Cotyledonoid dissecting leiomyoma","type":"exact"},{"name":"Sternberg tumor","type":"exact"},{"name":"Sternberg tumour","type":"exact"}],"termid":"MONDO:0001842","xrefs":{"Monarch":{"xref_id":"0001842"}}}


id: MONDO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the inner ear. The cause is often not clear. It may be due to a virus, but it can also arise from bacterial infection, head injury, extreme stress, an allergy, or as a reaction to medication.","definition_xrefs":["NCIT:C128369","Wikipedia:Labyrinthitis"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infectious otitis interna","termid":"MONDO:0002812"},{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labyrinthitis","secondary_identifiers":["MESH:D007762","ICD10CM:H83.0","EFO:0009604","DOID:1468","DOID:3930","SCTID:23919004","MEDGEN:5991","icd11.foundation:901550793","ICD9:386.3","ICD9:386.30","UMLS:C0022893"],"synonyms":[{"name":"inflammation of internal ear","type":"exact"},{"name":"inner ear infection","type":"related"},{"name":"internal ear inflammation","type":"exact"},{"name":"otitis interna","type":"exact"}],"termid":"MONDO:0002008","xrefs":{"Monarch":{"xref_id":"0002008"}}}


id: GO:0018753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanurate + H2O = 1-carboxybiuret + H+.","definition_xrefs":["EC:3.5.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"cyanuric acid amidohydrolase activity","secondary_identifiers":["RHEA:70363","UM-BBD_reactionID:r0116","MetaCyc:RXN-20062"],"termid":"GO:0018753"}


id: PBO:0048101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTO intronic transcript 1","termid":"PBO:0048101"}


id: PBO:0043124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding family member 2","termid":"PBO:0043124"}


id: GO:0060085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of smooth muscle contraction is reduced in the bladder outlet that contributes to the expulsion of urine from the body.","definition_xrefs":["PMID:15827347","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of smooth muscle","termid":"GO:0044557"},{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"part_of","term_name":"micturition","termid":"GO:0060073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle relaxation of the bladder outlet","synonyms":[{"name":"synaptic transmission involved in urination","type":"exact"}],"termid":"GO:0060085"}


id: PBO:0001706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity factor Rax2","termid":"PBO:0001706"}


id: PBO:0035967
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_checkpoint_complex_level","termid":"PBO:0035967"}


id: PR:Q10170
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26A3.17c gene.","definition_xrefs":["UniProtKB:Q10170","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine N-methyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.17c","synonyms":[{"name":"Spom972h-SPAC26A3.17c","type":"exact"},{"name":"protein-arginine N5-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type IV PRMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type IV protein arginine N-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10170"}


id: PBO:0091672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific Smp foci lncRNA Sme2, short isoform","termid":"PBO:0091672"}


id: MONDO:0008847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrichia with papular lesions is a rare inherited form of alopecia characterized by irreversible hair loss during the neonatal period on all hear-bearing areas of the body, later associated with the development of papular lesions all over the body and preferentially on the face and extensor surfaces of the extremities.","definition_xrefs":["Orphanet:86819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrichia with papular lesions","secondary_identifiers":["SCTID:715963002","UMLS:C1859592","MEDGEN:395299","DOID:0060689","GARD:16762","MESH:C565924","OMIM:209500"],"synonyms":[{"name":"APL","type":"related"},{"name":"atrichia with papular lesions","type":"exact"},{"name":"papular atrichia","type":"exact"}],"termid":"MONDO:0008847","xrefs":{"Monarch":{"xref_id":"0008847"}}}


id: GO:0071543
data:
  {"annotated_genes":["SJAG_04870","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81075,107135],"is_not":false,"summary":null,"term":"GO:0071543"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a diphosphoinositol polyphosphate, 1,2,3,4,5,6-cyclohexanehexol with one or more diphosphate groups and multiple monophosphate groups attached.","definition_xrefs":["GOC:mah","PMID:12387729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diphosphoinositol polyphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"diphosphoinositol polyphosphate metabolism","type":"exact"}],"termid":"GO:0071543","terms_by_termid":{"GO:0071543":null}}


id: PBO:0046304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENAH actin regulator","termid":"PBO:0046304"}


id: PBO:0029202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_micafungin","termid":"PBO:0029202"}


id: FYPO:0000374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of RNA modification is increased. All RNA modification may be increased, or one or more specific RNA modifications may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA modification","synonyms":[{"name":"RNA modification: increased","type":"related"},{"name":"increased RNA modification during mitotic cell cycle","type":"related"},{"name":"increased RNA modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000374"}


id: PBO:0088710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2457 family conserved fungal protein","termid":"PBO:0088710"}


id: GO:0052515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of the symbiont organism; the innate immune response is the symbiont's first line of defense against infection. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont innate immunity (obsolete GO:0052515)","synonyms":[{"name":"positive regulation by organism of symbiont innate immunity","type":"exact"},{"name":"positive regulation of symbiont innate immune response","type":"exact"}],"termid":"GO:0052515"}


id: MONDO:0044279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bone mineral density quantitative trait locus 15 (obsolete MONDO:0044279)","secondary_identifiers":["OMIM:613418"],"synonyms":[{"name":"BMND15","type":"related"},{"name":"bone mineral density QTL 15","type":"exact"},{"name":"bone mineral density quantitative trait locus 15","type":"related"},{"name":"compression fracture, susceptibility to","type":"related"},{"name":"metaphyseal fracture, susceptibility to","type":"related"},{"name":"osteoporosis, susceptibility to","type":"related"}],"termid":"MONDO:0044279","xrefs":{"Monarch":{"xref_id":"0044279"}}}


id: MONDO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"marginal corneal ulcer","secondary_identifiers":["DOID:10441","UMLS:C0155067","MEDGEN:509765","icd11.foundation:2035123281","SCTID:47398006","ICD9:370.01"],"termid":"MONDO:0001034","xrefs":{"Monarch":{"xref_id":"0001034"}}}


id: PBO:0004153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma1 (predicted)","termid":"PBO:0004153"}


id: PBO:0091139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein","termid":"PBO:0091139"}


id: PR:Q9URZ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein-L-isoaspartate(D-aspartate) O-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02279","PANTHER:PTHR11579:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate O-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.08","secondary_identifiers":["UniProtKB:Q9URZ1"],"synonyms":[{"name":"L-isoaspartyl protein carboxyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCMT1","type":"exact"},{"name":"protein L-isoaspartyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein-beta-aspartate methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URZ1"}


id: PBO:0075993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP1B antisense RNA 1","termid":"PBO:0075993"}


id: PBO:0056197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A7, pseudogene","termid":"PBO:0056197"}


id: MONDO:0019806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary progressive aphasia (PPA) is a neurodegenerative disorder, characterized by a primary dissolution of language, with relative sparing of other mental faculties for at least the first 2 years of illness. PPA is recognized as the language variant in the frontotemporal dementia (FTD) spectrum of disorders. PPA can be classified into 3 subtypes based on specific speech and language features: semantic dementia (SD), progressive non-fluent aphasia (PNFA) and logopenic progressive aphasia (lv-PPA).","definition_xrefs":["Orphanet:95432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"primary progressive aphasia","secondary_identifiers":["MEDGEN:79466","EFO:0009053","UMLS:C0282513","DOID:0081388","MESH:D018888","NCIT:C85024","GARD:8541"],"synonyms":[{"name":"Mesulam syndrome","type":"exact"},{"name":"PPA","type":"exact"},{"name":"primary progressive aphasia syndrome","type":"related"}],"termid":"MONDO:0019806","xrefs":{"Monarch":{"xref_id":"0019806"}}}


id: PBO:0067235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 306, pseudogene","termid":"PBO:0067235"}


id: PBO:0068306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 10 pseudogene 1","termid":"PBO:0068306"}


id: PBO:0034409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_modification_(obsolete_requires_modification)","termid":"PBO:0034409"}


id: PBO:0071359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 18","termid":"PBO:0071359"}


id: GO:0043891
data:
  {"annotated_genes":["SJAG_06622","SJAG_06621","SJAG_02135","SJAG_03903","SJAG_03828","SJAG_00027","SJAG_02945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111370,111372,111373,76469,111367,74310,82225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004365"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD(P)+ = 3-phospho-D-glyceroyl phosphate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_02135":null,"SJAG_02945":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (phosphorylating) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GAPDHSYNEC-RXN"],"synonyms":[{"name":"D-glyceraldehyde 3-phosphate:NAD(P)+ oxidoreductase (phosphorylating)","type":"exact"},{"name":"NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase activity","type":"related"},{"name":"glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) (phosphorylating)","type":"exact"},{"name":"triosephosphate dehydrogenase (NAD(P))","type":"exact"},{"name":"triosephosphate dehydrogenase (NAD(P)+)","type":"related"}],"termid":"GO:0043891","terms_by_termid":{"GO:0004365":null}}


id: PBO:0058680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6808","termid":"PBO:0058680"}


id: FYPO:0002621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of malate dehydrogenase (decarboxylating) (NAD+) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"abnormal 'malic' enzyme activity","type":"related"},{"name":"abnormal (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"abnormal NAD-linked malic enzyme activity","type":"related"},{"name":"abnormal NAD-malic enzyme activity","type":"broad"},{"name":"abnormal NAD-specific malic enzyme activity","type":"related"},{"name":"abnormal malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"FYPO:0002621"}


id: MONDO:0100065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tyrosine hydroxylase deficiency with onset typically between age three and 12 months. Motor milestones are overtly delayed in this severe form. Affected infants demonstrate truncal hypotonia and parkinsonian symptoms and signs (hypokinesia, rigidity of extremities, and/or tremor).","definition_xrefs":["PMID:20301610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine hydroxylase deficiency","termid":"MONDO:0100064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"TH-deficient infantile parkinsonism and motor delay","synonyms":[{"name":"tyrosine hydroxylase infantile parkinsonism and motor delay","type":"exact"}],"termid":"MONDO:0100065","xrefs":{"Monarch":{"xref_id":"0100065"}}}


id: GO:0009329
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two alpha subunits and two beta subunits. Part of the acetyl-CoA carboxylase complex. Catalyzes the transfer of a carboxyl group to form malonyl-CoA.","definition_xrefs":["GOC:jl","PMID:2719476","PMID:8423010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"acetyl-CoA carboxylase complex","termid":"GO:0009317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"acetate CoA-transferase complex","termid":"GO:0009329"}


id: PBO:0075088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 138","termid":"PBO:0075088"}


id: PBO:0044846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131A","termid":"PBO:0044846"}


id: PBO:0074871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 54","termid":"PBO:0074871"}


id: GO:0031053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule.","definition_xrefs":["PMID:15211354","GOC:sl","PMID:25799998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"primary miRNA processing","secondary_identifiers":["GO:1990729","GO:1990744"],"synonyms":[{"name":"pri-miRNA processing","type":"exact"},{"name":"primary miRNA methylation","type":"narrow"},{"name":"primary miRNA modification","type":"exact"},{"name":"primary microRNA processing","type":"exact"}],"termid":"GO:0031053"}


id: MONDO:0958077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"collagen 6-related congenital muscular dystrophy","secondary_identifiers":["MEDGEN:1864182","UMLS:C5816703","Orphanet:646098"],"termid":"MONDO:0958077","xrefs":{"Monarch":{"xref_id":"0958077"}}}


id: PBO:0043898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 2","termid":"PBO:0043898"}


id: PBO:0048262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosamine (N-acetyl)-6-sulfatase","termid":"PBO:0048262"}


id: GO:0021922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of a cell in the dorsal spinal cord that affects the rate of its division.","definition_xrefs":["GOC:dph","GO_REF:0000021","PMID:12593981","GOC:dgh","GOC:cls","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in regulation of cell proliferation in dorsal spinal cord (obsolete GO:0021922)","synonyms":[{"name":"Wnt receptor signaling pathway involved in regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"Wnt receptor signalling pathway involved in regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"Wnt-activated signaling pathway involved in regulation of cell proliferation in dorsal spinal cord","type":"exact"}],"termid":"GO:0021922"}


id: FYPO:0000650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal. The septation index is the proportion of the population undergoing septation at any given time, and is usually around 10% (varying between 7-15%) for wild type.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased septation index","synonyms":[{"name":"increased number of septated cells","type":"exact"},{"name":"increased septation","type":"related"},{"name":"septated","type":"related"}],"termid":"FYPO:0000650"}


id: PBO:0072215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 14","termid":"PBO:0072215"}


id: MONDO:0016032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital short femur is a rare malformation of variable severity ranging from mild hypoplasia to complete absence of the femur.","definition_xrefs":["Orphanet:1987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"femoral agenesis/hypoplasia","secondary_identifiers":["MEDGEN:87499","GARD:1503","ICD9:755.34","icd11.foundation:662157487","SCTID:93255008","UMLS:C0345375"],"synonyms":[{"name":"congenital short femur","type":"exact"},{"name":"femoral intercalary meromelia","type":"exact"}],"termid":"MONDO:0016032","xrefs":{"Monarch":{"xref_id":"0016032"}}}


id: PBO:0089079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lys48-specific deubiquitinase Mindy family, Miy1","termid":"PBO:0089079"}


id: PBO:0027507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_acetone","termid":"PBO:0027507"}


id: PR:O13817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec73 gene.","definition_xrefs":["UniProtKB:O13817","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec73 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.01c","synonyms":[{"name":"Spom972h-sec73","type":"exact"}],"termid":"PR:O13817"}


id: PBO:0057553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 668","termid":"PBO:0057553"}


id: SO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mating type region motif, one of two segments of homology found at all three mating loci (HML, MAT, and HMR).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Z1_region","synonyms":[{"name":"Z1-region","type":"exact"}],"termid":"SO:0002002"}


id: GO:1900624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte aggregation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monocyte aggregation","termid":"GO:1900623"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"negatively_regulates","term_name":"monocyte aggregation","termid":"GO:0070487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte aggregation","synonyms":[{"name":"down regulation of monocyte aggregation","type":"exact"},{"name":"down regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"down-regulation of monocyte aggregation","type":"exact"},{"name":"down-regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"downregulation of monocyte aggregation","type":"exact"},{"name":"downregulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"inhibition of monocyte aggregation","type":"narrow"},{"name":"inhibition of mononuclear phagocyte aggregation","type":"exact"},{"name":"negative regulation of mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:1900624"}


id: PBO:0060238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding protein C1","termid":"PBO:0060238"}


id: MONDO:0024478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenchymal hamartoma","secondary_identifiers":["UMLS:C0334090","MEDGEN:83108","NCIT:C40427"],"synonyms":[{"name":"mesenchymal hamartoma","type":"exact"}],"termid":"MONDO:0024478","xrefs":{"Monarch":{"xref_id":"0024478"}}}


id: PR:C6Y4B3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pga1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4B3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 2 subunit C167.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.09","synonyms":[{"name":"Spom972h-pga1","type":"exact"}],"termid":"PR:C6Y4B3"}


id: PBO:0058145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4441","termid":"PBO:0058145"}


id: PBO:0041316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 2","termid":"PBO:0041316"}


id: PBO:0091434
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli alkA/tag double mutant","termid":"PBO:0091434"}


id: PBO:0056590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MyoD family inhibitor domain containing","termid":"PBO:0056590"}


id: PBO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap130 (predicted)","termid":"PBO:0002329"}


id: GO:0043493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of a large and small subunit which catalyze the packaging of DNA into viral heads. Note that not all viral terminases have this structure, some exist as single polypeptides.","definition_xrefs":["GOC:mlg","GOC:jl","PMID:18687036","GOC:bm","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral terminase complex","synonyms":[{"name":"phage terminase complex","type":"narrow"},{"name":"virus terminase complex","type":"exact"}],"termid":"GO:0043493"}


id: PBO:0002251
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Pole Component","termid":"PBO:0002251"}


id: GO:0042410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + pimelate = AMP + diphosphate + H+ + pimelyl-CoA.","definition_xrefs":["EC:6.2.1.14","RHEA:14781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"6-carboxyhexanoate-CoA ligase activity","secondary_identifiers":["MetaCyc:6-CARBOXYHEXANOATE--COA-LIGASE-RXN","KEGG_REACTION:R03209"],"synonyms":[{"name":"6-carboxyhexanoate:CoA ligase (AMP-forming)","type":"related"},{"name":"6-carboxyhexanoyl-CoA synthetase activity","type":"related"},{"name":"pimeloyl-CoA synthetase activity","type":"related"},{"name":"pimelyl-CoA synthetase activity","type":"related"}],"termid":"GO:0042410"}


id: GO:1903472
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105619],"is_not":false,"summary":null,"term":"GO:1903472"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic actomyosin contractile ring contraction.","definition_xrefs":["PMID:1234","GO_REF:0000058","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cytokinetic process","termid":"GO:1903437"},{"relation_name":"is_a","term_name":"regulation of mitotic actomyosin contractile ring contraction","termid":"GO:1903471"},{"relation_name":"negatively_regulates","term_name":"mitotic actomyosin contractile ring contraction","termid":"GO:1902404"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000281"],"is_obsolete":false,"name":"negative regulation of mitotic actomyosin contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"down-regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"downregulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"inhibition of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of mitotic actomyosin contractile ring contraction","type":"narrow"},{"name":"negative regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of mitotic actomyosin contractile ring constriction","type":"exact"}],"termid":"GO:1903472","terms_by_termid":{"GO:1903472":null}}


id: MONDO:0010526
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88437],"is_not":false,"summary":null,"term":"MONDO:0010526"}]},"cv_name":"mondo","definition":"Fabry disease (FD) is a progressive, inherited, multisystemic lysosomal storage disease characterized by specific neurological, cutaneous, renal, cardiovascular, cochleo-vestibular and cerebrovascular manifestations.","definition_xrefs":["Orphanet:324"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"},{"relation_name":"excluded_subClassOf","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic lymphedema (obsolete MONDO:0019520)","termid":"MONDO:0019520"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"excluded_subClassOf","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"Fabry disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:8083","icd11.foundation:66996647","UMLS:C0002986","NANDO:1200157","MESH:D000795","SCTID:16652001","NANDO:2200563","NORD:1115","DOID:14499","OMIM:301500","GARD:6400","MedDRA:10016016","NCIT:C84701"],"synonyms":[{"name":"Alpha-galactosidase A deficiency","type":"exact"},{"name":"Anderson-Fabry disease","type":"exact"},{"name":"FD","type":"exact"},{"name":"Fabry disease","type":"exact"},{"name":"Fabry disease, Cardiac variant","type":"related"},{"name":"Fabry's disease","type":"exact"},{"name":"Fd","type":"exact"},{"name":"Gla deficiency","type":"related"},{"name":"alpha galactosidase deficiency","type":"exact"},{"name":"angiokeratoma corporis diffusum","type":"exact"},{"name":"angiokeratoma, diffuse","type":"related"},{"name":"ceramide trihexosidase deficiency","type":"related"},{"name":"deficiency of melibiase","type":"exact"},{"name":"diffuse angiokeratoma","type":"exact"},{"name":"hereditary dystopic lipidosis","type":"related"}],"termid":"MONDO:0010526","terms_by_termid":{"MONDO:0010526":null},"xrefs":{"Monarch":{"xref_id":"0010526"}}}


id: GO:1900614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of F-9775B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"F-9775B metabolic process","termid":"GO:1900612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"F-9775B biosynthetic process","synonyms":[{"name":"F-9775B anabolism","type":"exact"},{"name":"F-9775B biosynthesis","type":"exact"},{"name":"F-9775B formation","type":"exact"},{"name":"F-9775B synthesis","type":"exact"}],"termid":"GO:1900614"}


id: PBO:0070530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 29","termid":"PBO:0070530"}


id: PBO:0077122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMP metallopeptidase inhibitor 1","termid":"PBO:0077122"}


id: PBO:0082813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved E2-like conjugating enzyme; mediates formation of the Atg12p-Atg5p conjugate, which is a critical step in autophagy","termid":"PBO:0082813"}


id: PBO:0047056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 117 member B","termid":"PBO:0047056"}


id: GO:0001781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a neutrophil, any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes.","definition_xrefs":["PMID:12752675","GOC:add","GOC:mtg_apoptosis","CL:0000775","PMID:12960266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory cell apoptotic process","termid":"GO:0006925"},{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"},{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"},{"relation_name":"part_of","term_name":"neutrophil homeostasis","termid":"GO:0001780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil apoptotic process","synonyms":[{"name":"apoptosis of neutrophils","type":"exact"},{"name":"neutrophil apoptosis","type":"narrow"},{"name":"neutrophil programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of neutrophils by apoptosis","type":"exact"},{"name":"programmed cell death, neutrophils","type":"exact"}],"termid":"GO:0001781"}


id: PBO:0004929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A binding protein (predicted)","termid":"PBO:0004929"}


id: GO:0000344
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid-encoded DNA-directed RNA polymerase complex that resembles eubacterial multisubunit RNA polymerases with a core composed of alpha, beta, and beta-prime subunits. An additional subunit, a sigma factor, is required for promoter recognition. PEP-B is distinguished from PEP-A by its sensitivity to the antibiotic rifampicin. PEP-B is found in both etioplasts and chloroplasts, but is the predominate form in etioplasts. It forms the core of the PEP-A form; the conversion from PEP-B to PEP-A occurs during chloroplast maturation.","definition_xrefs":["PMID:10946105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid-encoded plastid RNA polymerase complex","termid":"GO:0000427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"plastid-encoded plastid RNA polymerase complex B","synonyms":[{"name":"PEP-B","type":"exact"}],"termid":"GO:0000344"}


id: MONDO:0012079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"Asperger syndrome","termid":"MONDO:0005259"},{"relation_name":"is_a","term_name":"Asperger syndrome, susceptibility to","termid":"MONDO:0100440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asperger syndrome, susceptibility to, 2","secondary_identifiers":["OMIM:608631","MEDGEN:332517","UMLS:C1837697"],"synonyms":[{"name":"ASPERGER syndrome, susceptibility to, 2","type":"related"},{"name":"ASPG2","type":"exact"},{"name":"Asperger syndrome susceptibility 2, Isolated cases","type":"exact"}],"termid":"MONDO:0012079","xrefs":{"Monarch":{"xref_id":"0012079"}}}


id: FYPO:0004226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nucleosome binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abolished chromatin binding","termid":"FYPO:0001093"},{"relation_name":"is_a","term_name":"abnormal nucleosome binding","termid":"FYPO:0004225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished nucleosome binding","synonyms":[{"name":"nucleosome binding abolished","type":"exact"}],"termid":"FYPO:0004226"}


id: MONDO:0000529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000529 (obsolete MONDO:0000529)","termid":"MONDO:0000529","xrefs":{"Monarch":{"xref_id":"0000529"}}}


id: GO:0032487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rap protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rap protein signal transduction","termid":"GO:0032486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Rap protein signal transduction","termid":"GO:0032487"}


id: GO:0042997
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89919],"is_not":false,"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Golgi to plasma membrane protein transport","termid":"GO:0042996"},{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to plasma membrane","termid":"GO:1903077"},{"relation_name":"negatively_regulates","term_name":"Golgi to plasma membrane protein transport","termid":"GO:0043001"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Golgi to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"down-regulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"downregulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"inhibition of Golgi to plasma membrane protein transport","type":"narrow"}],"termid":"GO:0042997","terms_by_termid":{"GO:0042997":null}}


id: GO:0019361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA, a derivative of coenzyme A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA metabolic process","termid":"GO:0046432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process","secondary_identifiers":["MetaCyc:P2-PWY"],"synonyms":[{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA anabolism","type":"exact"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthesis","type":"exact"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA formation","type":"exact"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA synthesis","type":"exact"}],"termid":"GO:0019361"}


id: PBO:0003319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp31","termid":"PBO:0003319"}


id: PBO:0042155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 16","termid":"PBO:0042155"}


id: PBO:0067943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 245","termid":"PBO:0067943"}


id: PBO:0005618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf16","termid":"PBO:0005618"}


id: GO:1904625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycine secretion, neurotransmission.","definition_xrefs":["PMID:22988142","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission, glycinergic","termid":"GO:0060093"},{"relation_name":"is_a","term_name":"regulation of glycine secretion, neurotransmission","termid":"GO:1904624"},{"relation_name":"negatively_regulates","term_name":"glycine secretion, neurotransmission","termid":"GO:0061537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glycine secretion, neurotransmission","synonyms":[{"name":"down regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"down-regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"downregulation of glycine secretion, neurotransmission","type":"exact"},{"name":"inhibition of glycine secretion, neurotransmission","type":"narrow"}],"termid":"GO:1904625"}


id: PBO:0050958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 1","termid":"PBO:0050958"}


id: PBO:0051232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-30-21 (pseudogene)","termid":"PBO:0051232"}


id: PBO:0005379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase protein x component, Pdx1 (predicted)","termid":"PBO:0005379"}


id: PBO:0070156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 70 pseudogene","termid":"PBO:0070156"}


id: GO:0102612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9beta-pimara-7,15-diene + NADPH + O2 + H+ = 6beta-hydroxy-syn-pimaradiene + NADP + H2O.","definition_xrefs":["GOC:pz","PMID:22215681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"syn-pimaradiene 6beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-15452"],"termid":"GO:0102612"}


id: MOD:00957
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of, or a change resulting in an alteration of the measured molecular mass of, a peptide or protein amino acid residue with a secondary loss of a neutral carbon dioxide molecular fragment.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified residue with neutral loss of carbon dioxide","synonyms":[{"name":"dCO2ModRes","type":"exact"}],"termid":"MOD:00957"}


id: PBO:0072789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma antigen 4, pseudogene","termid":"PBO:0072789"}


id: PBO:0039119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIDA pseudogene 2","termid":"PBO:0039119"}


id: GO:0072410
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"}]},"cv_name":"biological_process","definition":"A process that acts directly to delay or stop progression through the cell cycle in response to signals generated as a result of meiotic cell cycle checkpoint signaling; contributes to a meiotic cell cycle checkpoint.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to meiotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic cell cycle checkpoint effector process","type":"exact"},{"name":"response to signal involved in meiotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0072410","terms_by_termid":{"GO:0072441":null}}


id: MONDO:0016979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MRCS syndrome is a rare, genetic retinal dystrophy disorder characterized by bilateral microcornea, rod-cone dystrophy, cataracts and posterior staphyloma, in the absence of other systemic features. Night blindness is typically the presenting manifestation and nystagmus, strabismus, astigmatism and angle closure glaucoma may be associated findings. Progressive visual acuity deterioration, due to pulverulent-like cataracts, results in poor vision ranging from no light perception to 20/400.","definition_xrefs":["Orphanet:263347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"MRCS syndrome","secondary_identifiers":["GARD:17255","icd11.foundation:392681472","UMLS:C4749856","MEDGEN:1666962"],"synonyms":[{"name":"microcornea-rod-cone dystrophy-cataract-posterior staphyloma syndrome","type":"exact"}],"termid":"MONDO:0016979","xrefs":{"Monarch":{"xref_id":"0016979"}}}


id: MONDO:0700185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes that occurs in a cat.","definition_xrefs":["NCIT:C156362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma, non-human animal","termid":"MONDO:0700132"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline melanoma","termid":"MONDO:0700185","xrefs":{"Monarch":{"xref_id":"0700185"}}}


id: MONDO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant thymoma that extends beyond the capsule and infiltrates the surrounding tissues.","definition_xrefs":["NCIT:C7904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"},{"relation_name":"is_a","term_name":"thymoma","termid":"MONDO:0006456"},{"relation_name":"is_a","term_name":"invasive carcinoma","termid":"MONDO:0040677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"invasive malignant thymoma","secondary_identifiers":["MEDGEN:78892","DOID:3283","UMLS:C0278846"],"synonyms":[{"name":"infiltrating thymoma","type":"exact"},{"name":"invasive malignant thymoma","type":"exact"},{"name":"malignant thymoma, invasive","type":"exact"},{"name":"thymoma malignant invasive","type":"exact"}],"termid":"MONDO:0002592","xrefs":{"Monarch":{"xref_id":"0002592"}}}


id: PR:Q9USW1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A basic salivary proline-rich protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02949","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21B10.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.03c","secondary_identifiers":["UniProtKB:Q9USW1"],"synonyms":[{"name":"Spom972h-PRB1","type":"exact"}],"termid":"PR:Q9USW1"}


id: GO:1990174
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93561],"is_not":false,"summary":null,"term":"GO:1990174"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of the cap from an unmethylated 5'-end capped RNA resulting in the release of the entire cap structure (GpppN) and a 5' monophosphorylated RNA.","definition_xrefs":["GOC:dgf","PMID:20802481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphodiesterase decapping endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9935300","Reactome:R-HSA-9935319"],"synonyms":[{"name":"G(5')pppN pyrophosphatase activity","type":"related"}],"termid":"GO:1990174","terms_by_termid":{"GO:1990174":null}}


id: PBO:0066248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMS3 antisense RNA 1","termid":"PBO:0066248"}


id: GO:0000736
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76711],"is_not":false,"summary":null,"term":"GO:0000736"}]},"cv_name":"biological_process","definition":"During DSBR via single-strand annealing, the removal of nonhomologous sequences at the broken 3' single-strand DNA end before DNA repair synthesis can occur.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"removal of nonhomologous ends","termid":"GO:0000735"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"double-strand break repair via single-strand annealing, removal of nonhomologous ends","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000736","terms_by_termid":{"GO:0000736":null}}


id: GO:0017024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class I myosin; myosin I heavy chains are single-headed, possess tails of various lengths, and do not self-associate into bipolar filaments.","definition_xrefs":["GOC:bf","PMID:18344022","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"myosin I binding","termid":"GO:0017024"}


id: MONDO:0019672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibular hemimelia is a congenital longitudinal limb deficiency characterized by complete or partial absence of the fibula bone.","definition_xrefs":["Orphanet:93323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemimelia","termid":"MONDO:0016240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibular hemimelia","secondary_identifiers":["UMLS:C0265634","GARD:8659","MEDGEN:539380","icd11.foundation:915482054"],"synonyms":[{"name":"congenital longitudinal deficiency of the fibula","type":"exact"},{"name":"fibular longitudinal meromelia","type":"exact"}],"termid":"MONDO:0019672","xrefs":{"Monarch":{"xref_id":"0019672"}}}


id: MONDO:0040797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An outdated term to describe certain types of headache which were thought to be related to blood vessel swelling and hyperemia as cause of pain. it is no longer a recognized term and not mentioned in the Headache classification of the International Headache society (IHS).","definition_xrefs":["Wikipedia:Vascular_headache","PMID:3048700"],"gene_count":0,"genotype_count":0,"name":"obsolete vascular headache (obsolete MONDO:0040797)","secondary_identifiers":["MESH:D014653","SCTID:128187005"],"synonyms":[{"name":"vascular headache","type":"exact"}],"termid":"MONDO:0040797","xrefs":{"Monarch":{"xref_id":"0040797"}}}


id: PBO:0089172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein repair carboxyl methyl esterase","termid":"PBO:0089172"}


id: PBO:0087359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing protein; required for splicing of two mitochondrial group I introns (BI3 in COB and AI5beta in COX1); forms a splicing complex, containing four subunits of Mrs1p and two subunits of the BI3-encoded maturase, that binds to the BI3 RNA; MRS1 has a paralog, CCE1, that arose from the whole genome duplication","termid":"PBO:0087359"}


id: PBO:0078477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 1-1","termid":"PBO:0078477"}


id: PBO:0040078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin domain containing 5","termid":"PBO:0040078"}


id: GO:0015484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any substance that causes the lysis of red blood cells.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete hemolysin activity (obsolete GO:0015484)","synonyms":[{"name":"hemolysin activity","type":"exact"}],"termid":"GO:0015484"}


id: PR:O94489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.08","synonyms":[{"name":"EF-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef3","type":"exact"}],"termid":"PR:O94489"}


id: GO:0034773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of three methyl groups to lysine at position 20 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 trimethylation (obsolete GO:0034773)","synonyms":[{"name":"histone H4 K20 trimethylation","type":"exact"},{"name":"histone lysine H4 K20 trimethylation","type":"exact"}],"termid":"GO:0034773"}


id: GO:0006618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the signal peptide from a nascent protein during cotranslational membrane targeting.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal peptide processing","termid":"GO:0006465"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0006605","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, signal sequence processing","synonyms":[{"name":"SRP-dependent cotranslational membrane targeting, signal sequence processing","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, signal sequence processing","type":"exact"},{"name":"signal sequence processing during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006618"}


id: GO:0051712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the killing by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell killing","termid":"GO:0031343"},{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of killing of cells of another organism","termid":"GO:0051709"},{"relation_name":"positively_regulates","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of killing of cells of another organism","secondary_identifiers":["GO:0052501","GO:0052330","GO:0052518","GO:0052529","GO:0052388"],"synonyms":[{"name":"activation by organism of apoptotic programmed cell death in other organism during symbiotic interaction","type":"related"},{"name":"activation of killing of cells of another organism","type":"narrow"},{"name":"enhancement of other organism programmed cell death by organism","type":"related"},{"name":"positive regulation of killing of cells of other organism","type":"exact"},{"name":"stimulation of killing of cells of another organism","type":"narrow"},{"name":"up regulation of killing of cells of another organism","type":"exact"},{"name":"up-regulation of killing of cells of another organism","type":"exact"},{"name":"upregulation of killing of cells of another organism","type":"exact"}],"termid":"GO:0051712"}


id: _global:spatially_disjoint_from
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A is spatially_disjoint_from B if and only if they have no parts in common","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"_global:mereotopologically_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatially_disjoint_from","secondary_identifiers":["RO:0002163"],"termid":"_global:spatially_disjoint_from"}


id: MONDO:1010907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central core myopathy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central core myopathy, non-human animal","termid":"MONDO:1010192"},{"relation_name":"is_a","term_name":"myofibrillar myopathy, horse","termid":"MONDO:1010936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central core myopathy, horse","secondary_identifiers":["OMIA:000172-9796"],"termid":"MONDO:1010907","xrefs":{"Monarch":{"xref_id":"1010907"}}}


id: GO:0038189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a neuropilin protein on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","PMID:12852851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neuropilin signaling pathway","synonyms":[{"name":"Npn signaling","type":"exact"}],"termid":"GO:0038189"}


id: GO:0150077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuroinflammatory response.","definition_xrefs":["PMID:10981966","GOC:bc","PMID:11099416","PMID:18164423","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"regulates","term_name":"neuroinflammatory response","termid":"GO:0150076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuroinflammatory response","termid":"GO:0150077"}


id: GO:0140203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of spermidine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine import across plasma membrane","termid":"GO:0140202"},{"relation_name":"is_a","term_name":"spermidine transmembrane transport","termid":"GO:1903711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"spermidine import across plasma membrane","termid":"GO:0140203"}


id: MONDO:0008031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any facioscapulohumeral muscular dystrophy in which the cause of the disease is a mutation in the SMCHD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facioscapulohumeral muscular dystrophy","termid":"MONDO:0001347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"facioscapulohumeral muscular dystrophy 2","secondary_identifiers":["GARD:15088","DOID:0111193","MEDGEN:320405","MESH:C563557","NCIT:C172705","OMIM:158901","UMLS:C1834671"],"synonyms":[{"name":"FSHD2","type":"related"},{"name":"Fshd2, digenic","type":"related"},{"name":"SMCHD1 facioscapulohumeral muscular dystrophy","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy 2","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy 2, digenic","type":"related"},{"name":"facioscapulohumeral muscular dystrophy caused by mutation in SMCHD1","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy type 2","type":"exact"},{"name":"fascioscapulohumeral muscular dystrophy 2, digenic, digenic dominant","type":"exact"},{"name":"muscular dystrophy, facioscapulohumeral, type 1B","type":"related"},{"name":"muscular dystrophy, facioscapulohumeral, type 2","type":"related"}],"termid":"MONDO:0008031","xrefs":{"Monarch":{"xref_id":"0008031"}}}


