# terms

id: PBO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 like","termid":"PBO:0070744"}


id: MOD:02052
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-methionine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-methionine residue","synonyms":[{"name":"XlnkMet","type":"exact"}],"termid":"MOD:02052"}


id: GO:0035291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the intercalary segment of the anterior head, following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["PMID:10477305","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, head","termid":"GO:0007380"},{"relation_name":"part_of","term_name":"anterior head segmentation","termid":"GO:0035288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, intercalary segment","termid":"GO:0035291"}


id: PBO:0024860
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex binds a 3' single-stranded DNA overhang and translocates along an DNA/RNA duplex in the 3' to 5' direction","termid":"PBO:0024860"}


id: PBO:0057547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 663a","termid":"PBO:0057547"}


id: GO:1901318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of flagellated sperm motility.","definition_xrefs":["GOC:cilia","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cilium movement","termid":"GO:0003354"},{"relation_name":"is_a","term_name":"regulation of flagellated sperm motility","termid":"GO:1901317"},{"relation_name":"is_a","term_name":"negative regulation of cilium-dependent cell motility","termid":"GO:1902020"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"flagellated sperm motility","termid":"GO:0030317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of flagellated sperm motility","synonyms":[{"name":"down regulation of sperm motility","type":"broad"},{"name":"down regulation of sperm movement","type":"broad"},{"name":"down-regulation of sperm motility","type":"broad"},{"name":"down-regulation of sperm movement","type":"broad"},{"name":"downregulation of sperm motility","type":"broad"},{"name":"downregulation of sperm movement","type":"broad"},{"name":"inhibition of sperm motility","type":"narrow"},{"name":"inhibition of sperm movement","type":"broad"},{"name":"negative regulation of sperm motility","type":"broad"},{"name":"negative regulation of sperm movement","type":"broad"}],"termid":"GO:1901318"}


id: GO:0046281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cinnamic acid, 3-phenyl-2-propenoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cinnamic acid metabolic process","termid":"GO:0009803"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cinnamic acid catabolic process","synonyms":[{"name":"cinnamic acid breakdown","type":"exact"},{"name":"cinnamic acid catabolism","type":"exact"},{"name":"cinnamic acid degradation","type":"exact"},{"name":"cinnamylic acid catabolic process","type":"exact"},{"name":"cinnamylic acid catabolism","type":"exact"},{"name":"phenylacrylic acid catabolic process","type":"exact"},{"name":"phenylacrylic acid catabolism","type":"exact"}],"termid":"GO:0046281"}


id: PBO:0066803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 102","termid":"PBO:0066803"}


id: RO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of ribosomal translation of","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomally_translates_to","termid":"RO:0002513"}


id: PBO:0017505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stretch-activated calcium ion channel Yam8","termid":"PBO:0017505"}


id: PBO:0031156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_cell_cycle_phase","termid":"PBO:0031156"}


id: FYPO:0001383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal DNA content","termid":"FYPO:0001383"}


id: PBO:0088870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome base subcomplex ATPase subunit Rpt6","termid":"PBO:0088870"}


id: PBO:0049366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 1 pseudogene 1","termid":"PBO:0049366"}


id: PBO:0003345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3 alpha subunit (p135) (predicted)","termid":"PBO:0003345"}


id: MONDO:0957228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 71, with behavioral abnormalities","secondary_identifiers":["UMLS:C5830437","MEDGEN:1841073","OMIM:620330"],"termid":"MONDO:0957228","xrefs":{"Monarch":{"xref_id":"0957228"}}}


id: GO:0019539
data:
  {"annotated_genes":["SJAG_04032","SJAG_00792","SJAG_00469","SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107335,59555,95976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[95922],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a siderophore from other compounds, including hydroxamic acid. Hydroxamate is one of the three major chemical groups incorporated into siderophore structures with catechol and a-hydroxycarboxylate, each having a high selectivity for iron(3+).","definition_xrefs":["PMID:20376388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"hydroxymate-containing siderophore biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0031198","GO:0031197"],"termid":"GO:0019539","terms_by_termid":{"GO:0031169":null,"GO:1905569":null}}


id: GO:1900344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from dimethyl sulfide","termid":"GO:1900342"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from dimethyl sulfide","synonyms":[{"name":"activation of methane biosynthetic process from dimethyl sulfide","type":"narrow"},{"name":"up regulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"up-regulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"upregulation of methane biosynthetic process from dimethyl sulfide","type":"exact"}],"termid":"GO:1900344"}


id: PBO:0053222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat LGI family member 2","termid":"PBO:0053222"}


id: GO:0045606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"positive regulation of epidermis development","termid":"GO:0045684"},{"relation_name":"positively_regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermal cell differentiation","synonyms":[{"name":"activation of epidermal cell differentiation","type":"narrow"},{"name":"positive regulation of hypodermal cell differentiation","type":"related"},{"name":"stimulation of epidermal cell differentiation","type":"narrow"},{"name":"up regulation of epidermal cell differentiation","type":"exact"},{"name":"up-regulation of epidermal cell differentiation","type":"exact"},{"name":"upregulation of epidermal cell differentiation","type":"exact"}],"termid":"GO:0045606"}


id: PBO:0067428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 547, pseudogene","termid":"PBO:0067428"}


id: PBO:0068947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 191, pseudogene","termid":"PBO:0068947"}


id: MONDO:1010987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in puma.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, puma","secondary_identifiers":["OMIA:000487-9696"],"termid":"MONDO:1010987","xrefs":{"Monarch":{"xref_id":"1010987"}}}


id: PBO:0113024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium/H+ antiporter localized to endoplasmic reticulum membrane; member of calcium exchanger (CAX) family; targeted to vacuole via AP-3 pathway","termid":"PBO:0113024"}


id: GO:1901419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to alcohol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to alcohol","termid":"GO:1901419"}


id: MONDO:0023650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Littoral cell angioma is a rare primary vascular neoplasm of the spleen, composed of littoral cells that line the splenic sinuses of the red pulp. It was thought to be a benign, incidental lesion. However, many recent reports have described it to be a malignant lesion with congenital and immunological associations. The definitive diagnosis can only be made after histology and immunohistochemistry studies.","direct_ancestors":[{"relation_name":"is_a","term_name":"splenic hemangioma","termid":"MONDO:0002343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"littoral cell angioma of the spleen","secondary_identifiers":["SCTID:418040002","GARD:9714","MESH:C537031","UMLS:C1627365","MEDGEN:351507","NCIT:C200524"],"synonyms":[{"name":"littoral cell angioma","type":"related"}],"termid":"MONDO:0023650","xrefs":{"Monarch":{"xref_id":"0023650"}}}


id: GO:0052167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host innate immune response","secondary_identifiers":["GO:0052306"],"synonyms":[{"name":"modulation by organism of innate immune response in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host innate immunity","type":"exact"},{"name":"modulation of host innate immune response","type":"exact"},{"name":"perturbation of host innate immune response","type":"exact"}],"termid":"GO:0052167"}


id: PR:G2TRN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new9 gene.","definition_xrefs":["UniProtKB:G2TRN2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.10","synonyms":[{"name":"Spom972h-new9","type":"exact"}],"termid":"PR:G2TRN2"}


id: PBO:0046066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K pseudogene 1","termid":"PBO:0046066"}


id: FYPO:0006181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased, and some of the protein is present in the nucleus instead, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus","termid":"FYPO:0006100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic interphase","synonyms":[{"name":"decreased protein localisation to cytoplasm, with protein mislocalised to nucleus, during mitotic interphase","type":"exact"},{"name":"decreased protein localization in cytoplasm, with protein mislocalized to nucleus, during mitotic interphase","type":"exact"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic interphase, during vegetative growth","type":"exact"},{"name":"reduced protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic interphase","type":"exact"}],"termid":"FYPO:0006181"}


id: MONDO:0012612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 12","secondary_identifiers":["MESH:C567019","MEDGEN:370850","GARD:22540","UMLS:C1970200","OMIM:611090","DOID:0081180"],"synonyms":[{"name":"MRT12","type":"related"},{"name":"intellectual developmental disorder, autosomal recessive 12","type":"exact"},{"name":"intellectual disability, autosomal recessive 12","type":"exact"},{"name":"intellectual disability, autosomal recessive type 12","type":"exact"},{"name":"mental retardation, autosomal recessive 12","type":"related"},{"name":"mental retardation, autosomal recessive type 12","type":"exact"}],"termid":"MONDO:0012612","xrefs":{"Monarch":{"xref_id":"0012612"}}}


id: GO:0061927
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein transport macromolecular complex of the chloroplast membrane that interacts with the precursor proteins and contains components of both the outer membrane and inner membrane complexes containing at least Toc75, Toc159, Toc34 and Tic110.","definition_xrefs":["PMID:28745032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"TOC-TIC supercomplex I","termid":"GO:0061927"}


id: GO:0061802
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region that lies just beneath the plasma membrane in the part of a cell that is closest to the anterior as defined by the developing, or existing, anterior/posterior axis.","definition_xrefs":["GOC:15666355","GOC:17981131","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"anterior cell cortex","termid":"GO:0061802"}


id: GO:0019709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a nickel-iron-sulfur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide, found in carbon monoxide dehydrogenase.","definition_xrefs":["RESID:AA0310"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide (obsolete GO:0019709)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulphide","type":"exact"}],"termid":"GO:0019709"}


id: MONDO:0009588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langer mesomelic dysplasia (LMD) is characterized by severe disproportionate short stature with mesomelic and rhizomelic shortening of the upper and lower limbs.","definition_xrefs":["Orphanet:2632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesomelic dysplasia","termid":"MONDO:0023599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Langer mesomelic dysplasia","secondary_identifiers":["ICD9:756.59","MESH:C537267","OMIM:249700","MEDGEN:96585","SCTID:38494008","UMLS:C0432230","NCIT:C126876","GARD:3553"],"synonyms":[{"name":"LMD","type":"related"},{"name":"Langer mesomelic dysplasia","type":"exact"},{"name":"Langer syndrome","type":"exact"},{"name":"Langer type mesomelic dysplasia","type":"exact"},{"name":"dyschondrosteosis, homozygous","type":"related"},{"name":"langer mesomelic dysplasia, pseudoautosomal recessive","type":"exact"},{"name":"mesomelic dwarfism of the hypoplastic ulna, fibula and mandible type","type":"related"},{"name":"mesomelic dwarfism of the hypoplastic ulna, fibula, and mandible type","type":"related"},{"name":"mesomelic dwarfism, Langer type","type":"exact"}],"termid":"MONDO:0009588","xrefs":{"Monarch":{"xref_id":"0009588"}}}


id: GO:0005678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin assembly complex (obsolete GO:0005678)","synonyms":[{"name":"chromatin assembly complex","type":"exact"},{"name":"nucleosome assembly complex","type":"narrow"}],"termid":"GO:0005678"}


id: PBO:0113463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of  tail-anchored proteins proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for meiotic nuclear division; Get1p and Get2p form an aqueous channel for protein translocation and insertion into the membrane","termid":"PBO:0113463"}


id: GO:0033730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arogenate + NADP+ = L-tyrosine + NADPH + CO2.","definition_xrefs":["EC:1.3.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arogenate dehydrogenase [NAD(P)+] activity","termid":"GO:0033731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arogenate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN-5682","RHEA:15417"],"synonyms":[{"name":"L-arogenate:NADP+ oxidoreductase (decarboxylating) activity","type":"related"},{"name":"TyrAAT1","type":"related"},{"name":"TyrAAT2","type":"related"},{"name":"TyrAa","type":"related"},{"name":"arogenic dehydrogenase activity","type":"broad"},{"name":"pretyrosine dehydrogenase activity","type":"broad"}],"termid":"GO:0033730"}


id: PBO:0029252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actomyosin_contractile_ring_assembly,_clumped_medial_cortical_nodes","termid":"PBO:0029252"}


id: PBO:0043258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 16","termid":"PBO:0043258"}


id: PBO:0052749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 41","termid":"PBO:0052749"}


id: MOD:00259
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and the 5'-end of DNA through a phosphodiester bond to form O4'-(phospho-5'-DNA)-L-tyrosine.","definition_xrefs":["PubMed:3684578","RESID:AA0254","PubMed:2940511","PubMed:1861973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-DNA)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-deoxyribonucleic acid phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"ACT_SITE O-(5'-phospho-DNA)-tyrosine intermediate","type":"exact"},{"name":"MOD_RES O-(5'-phospho-DNA)-tyrosine","type":"exact"},{"name":"O4'-(phospho-5'-DNA)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-DNA phosphodiester","type":"exact"}],"termid":"MOD:00259"}


id: PBO:0071411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 17","termid":"PBO:0071411"}


id: _global:has_pathogen
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"host_of","termid":"_global:host_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_pathogen","secondary_identifiers":["RO:0002557"],"termid":"_global:has_pathogen"}


id: PBO:0075121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 170","termid":"PBO:0075121"}


id: PBO:0077494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 213","termid":"PBO:0077494"}


id: PBO:0072791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 1 pseudogene 1","termid":"PBO:0072791"}


id: PBO:0056002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 1","termid":"PBO:0056002"}


id: MONDO:0022399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal ciliopathy due to mutation in the RPGR gene (obsolete MONDO:0022399)","secondary_identifiers":["Orphanet:156171"],"termid":"MONDO:0022399","xrefs":{"Monarch":{"xref_id":"0022399"}}}


id: PBO:0061304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPEPPS pseudogene 1","termid":"PBO:0061304"}


id: PBO:0086223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with Thp3p; may have a role in transcription elongation and/or mRNA splicing; identified as a COP9 signalosome component but phenotype and interactions suggest it may not be involved with the signalosome","termid":"PBO:0086223"}


id: MONDO:0013651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the MED23 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 18","secondary_identifiers":["UMLS:C3280265","OMIM:614249","DOID:0081190","MEDGEN:481895","GARD:22552"],"synonyms":[{"name":"MED23","type":"related"},{"name":"MED23 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT18","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in MED23","type":"exact"},{"name":"autosomal recessive nonsyndromic intellectual disability-18","type":"related"},{"name":"autosomal recessive nonsyndromic mental retardation-18","type":"related"},{"name":"intellectual developmental disorder, autosomal recessive 18, with or without epilepsy","type":"exact"},{"name":"intellectual disability, autosomal recessive 18","type":"exact"},{"name":"intellectual disability, autosomal recessive type 18","type":"exact"},{"name":"mental retardation, autosomal recessive 18","type":"related"},{"name":"mental retardation, autosomal recessive type 18","type":"exact"}],"termid":"MONDO:0013651","xrefs":{"Monarch":{"xref_id":"0013651"}}}


id: GO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class Ib molecule. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen via MHC class Ib","termid":"GO:0002477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent","synonyms":[{"name":"TAP-dependent antigen processing and presentation of exogenous peptide antigen via MHC class Ib","type":"exact"},{"name":"TAP-dependent exogenous peptide antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"exogenous peptide antigen processing and presentation via MHC class Ib, TAP-dependent","type":"exact"}],"termid":"GO:0002481"}


id: GO:1903022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:rb","PMID:12192046"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands (obsolete GO:1903022)","synonyms":[{"name":"activation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"narrow"},{"name":"up regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"},{"name":"up-regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"},{"name":"upregulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"}],"termid":"GO:1903022"}


id: GO:0030066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome b6 (obsolete GO:0030066)","synonyms":[{"name":"cytochrome b-563","type":"related"},{"name":"cytochrome b6","type":"exact"}],"termid":"GO:0030066"}


id: PBO:0113279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; involved in the excretion of excess amino acids; member of the 12-spanner drug:H(+) antiporter DHA1 family; confers resistance to short-chain monocarboxylic acids and quinidine; relocalizes from plasma membrane to cytoplasm upon DNA replication stress; AQR1 has a paralog, QDR1, that arose from the whole genome duplication","termid":"PBO:0113279"}


id: FYPO:0000297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the organization of the microtubule cytoskeleton. Microtubule cytoskeleton organization results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and associated proteins.","definition_xrefs":["GO:0000226","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization phenotype","termid":"FYPO:0000295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"microtubule cytoskeleton organization phenotype","synonyms":[{"name":"fission yeast microtubule cytoskeleton organization phenotype","type":"exact"},{"name":"microtubule cytoskeleton organisation phenotype","type":"exact"}],"termid":"FYPO:0000297"}


id: GO:0048825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cotyledon over time, from its formation to the mature structure. The cotyledon is the modified leaf (seed leaf), found as part of the embryo in plant seeds. It is involved in either storage or absorption of food reserves. Dicotyledonous seeds contain two cotyledons, while monocotyledonous seeds contain only one. The cotyledons may appear above ground and show photosynthetic activity in the seedling.","definition_xrefs":["GOC:devbiol","GOC:tb","PO:0020030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development ending in seed dormancy","termid":"GO:0009793"},{"relation_name":"is_a","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cotyledon development","termid":"GO:0048825"}


id: GO:1990019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a protein storage vacuole, a storage vacuole that contains a lytic vacuole.","definition_xrefs":["GOC:tb","PMID:21670741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein storage vacuole organization","termid":"GO:1990019"}


id: PBO:0001890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylceramide biosynthesis protein (predicted)","termid":"PBO:0001890"}


id: MONDO:0019250
data:
  {"annotated_genes":["SJAG_01881","SJAG_04203","SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[88371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044330"},{"annotations":[87334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01881":null,"SJAG_04203":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of biogenic amine metabolism and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79214","GARD:18976","MEDGEN:1842301","UMLS:C5681274"],"synonyms":[{"name":"disorder of biogenic amine metabolism and transport","type":"related"}],"termid":"MONDO:0019250","terms_by_termid":{"MONDO:0012407":null,"MONDO:0015005":null,"MONDO:0044330":null},"xrefs":{"Monarch":{"xref_id":"0019250"}}}


id: PR:O74878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04195","PANTHER:PTHR12526:SF23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.08","secondary_identifiers":["UniProtKB:O74878"],"synonyms":[{"name":"Spom972h-ALG11","type":"exact"},{"name":"alpha-1,2-mannosyltransferase alg11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"asparagine-linked glycosylation protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"galactomannan deficiency protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycolipid 2-alpha-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74878"}


id: GO:0014897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of an organ due to an increase in size of muscle cells without cell division. In the case of striated muscle, this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle hypertrophy","termid":"GO:0014897"}


id: MONDO:0010731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Simpson-Golabi-Behmel syndrome is a rare X-linked multiple congenital anomalies syndrome, characterized by pre- and postnatal overgrowth, distinctive craniofacial features, variable congenital malformations, organomegaly and an increased tumor risk.","definition_xrefs":["Orphanet:373"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic diaphragmatic or abdominal wall malformation (obsolete MONDO:0015216)","termid":"MONDO:0015216"},{"relation_name":"excluded_subClassOf","term_name":"macroglossia","termid":"MONDO:0015496"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic diaphragmatic or thoracic malformation (obsolete MONDO:0015880)","termid":"MONDO:0015880"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic renal or urinary tract malformation (obsolete MONDO:0019721)","termid":"MONDO:0019721"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Simpson-Golabi-Behmel syndrome","secondary_identifiers":["ICD9:759.89","NORD:1717","MESH:C537340","GARD:7649","NANDO:2200978","UMLS:C4317043","SCTID:439143004","NCIT:C131002","MEDGEN:1387611","icd11.foundation:181316558"],"synonyms":[{"name":"DGSX","type":"exact"},{"name":"Golabi-Rosen syndrome","type":"exact"},{"name":"SDYS","type":"exact"},{"name":"SGB syndrome","type":"exact"},{"name":"SGBS","type":"exact"},{"name":"Sara Angers syndrome","type":"exact"},{"name":"Sgbs","type":"related"},{"name":"Simpson-Golabi-Behmel syndrome","type":"exact"},{"name":"X-linked dysplasia gigantism syndrome","type":"exact"},{"name":"dysplasia gigantism syndrome, X-linked","type":"related"}],"termid":"MONDO:0010731","xrefs":{"Monarch":{"xref_id":"0010731"}}}


id: MONDO:1010848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in sheep due to a mutation in the GLB1 gene. There is a buildup of GM1 gangliosides in tissues due to a lack of the enzyme beta-galactosidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000402-9940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, non-human animal","termid":"MONDO:1010167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM1 gangliosidosis GLB1-related, sheep","synonyms":[{"name":"gangliosidosis GM1, sheep","type":"related"}],"termid":"MONDO:1010848","xrefs":{"Monarch":{"xref_id":"1010848"}}}


id: MONDO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of gonococcal cystitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute cystitis","termid":"MONDO:0001650"},{"relation_name":"is_a","term_name":"gonococcal cystitis","termid":"MONDO:0021160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute gonococcal cystitis","secondary_identifiers":["MEDGEN:509193","DOID:13690","SCTID:24868007","ICD9:098.11","UMLS:C0153191"],"synonyms":[{"name":"acute gonorrhea of bladder","type":"exact"},{"name":"acute gonorrhoea of bladder","type":"exact"},{"name":"gonococcal cystitis (acute)","type":"exact"},{"name":"gonococcal cystitis, acute","type":"exact"}],"termid":"MONDO:0001777","xrefs":{"Monarch":{"xref_id":"0001777"}}}


id: SO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TCS element is a (yeast) transcription factor binding site, bound by the TEA DNA binding domain (DBD) of transcription factors. The consensus site is CATTCC or CATTCT.","definition_xrefs":["PMID:20118212","SO:ke","PMID:1489142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCS_element","synonyms":[{"name":"TCS element","type":"exact"},{"name":"TEA Consensus Sequence ","type":"exact"}],"termid":"SO:0002044"}


id: PBO:0051728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 1","termid":"PBO:0051728"}


id: PBO:0074519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A11","termid":"PBO:0074519"}


id: PBO:0058287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4662b","termid":"PBO:0058287"}


id: PBO:0083560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene RNP1","termid":"PBO:0083560"}


id: GO:2000927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"regulates","term_name":"cellodextrin catabolic process","termid":"GO:2000890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cellodextrin catabolic process","synonyms":[{"name":"regulation of cellodextrin catabolism","type":"exact"}],"termid":"GO:2000927"}


id: GO:0043417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle regeneration.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue regeneration","termid":"GO:0043416"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of wound healing","termid":"GO:0061045"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle tissue regeneration","synonyms":[{"name":"down regulation of skeletal muscle regeneration","type":"exact"},{"name":"down-regulation of skeletal muscle regeneration","type":"exact"},{"name":"downregulation of skeletal muscle regeneration","type":"exact"},{"name":"inhibition of skeletal muscle regeneration","type":"narrow"}],"termid":"GO:0043417"}


id: PBO:0071857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 52","termid":"PBO:0071857"}


id: MONDO:0033969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease-recurrent sinopulmonary infections syndrome","secondary_identifiers":["MEDGEN:1799955","Orphanet:529980","GARD:22205","UMLS:C5568532"],"termid":"MONDO:0033969","xrefs":{"Monarch":{"xref_id":"0033969"}}}


id: PBO:0029219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_punctate_nuclear_protein_localization","termid":"PBO:0029219"}


id: PBO:0113013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aurora kinase of the chromosomal passenger complex; mediates release of mono-oriented kinetochores from microtubules in MI, and kinetochore release from SPB clusters during meiotic exit; maintains meiotic spindle checkpoint delay in a mek1 null; maintains condensed chromosomes in anaphase; required for SPB cohesion and preventing multipolar spindle formation; promotes telomerase release at G2/M; Iocalizes to nuclear foci that diffuse upon DNA replication stress; inhibits Pse1p upon SAC arrest","termid":"PBO:0113013"}


id: PR:O60054
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC56F2.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein arp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.03","synonyms":[{"name":"Spom972h-SPBC56F2.03","type":"exact"}],"termid":"PR:O60054"}


id: PBO:0055179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2603","termid":"PBO:0055179"}


id: GO:0032508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating a region of unpaired single strands.","definition_xrefs":["GOC:mah","GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA duplex unwinding (obsolete GO:0032508)","synonyms":[{"name":"DNA unwinding","type":"exact"},{"name":"duplex DNA melting","type":"exact"}],"termid":"GO:0032508"}


id: GO:1900216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in metanephric collecting duct development.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:TermGenie","PMID:17314325","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in metanephric collecting duct development","termid":"GO:1900214"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in metanephric collecting duct development","termid":"GO:1900204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"activation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"activation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"activation of apoptotic process involved in metanephric collecting duct development","type":"narrow"},{"name":"activation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"activation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"activation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"activation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"activation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"activation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"positive regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"positive regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"positive regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"positive regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"up regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"up regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"up regulation of apoptotic process involved in metanephric collecting duct development","type":"exact"},{"name":"up regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"up regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"up regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"up regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"up regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"up regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"up-regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"up-regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of apoptotic process involved in metanephric collecting duct development","type":"exact"},{"name":"up-regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"up-regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"up-regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"upregulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"upregulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"upregulation of apoptotic process involved in metanephric collecting duct development","type":"exact"},{"name":"upregulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"upregulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"upregulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"upregulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"upregulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"upregulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900216"}


id: PBO:0016088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase like PAN complex subunit Ppk26","termid":"PBO:0016088"}


id: PBO:0058180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4474","termid":"PBO:0058180"}


id: PBO:0065724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader-Willi region non-protein coding RNA 1","termid":"PBO:0065724"}


id: PBO:0081721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF649 antisense RNA 1","termid":"PBO:0081721"}


id: GO:0030662
data:
  {"annotated_genes":["SJAG_04070","SJAG_04474","SJAG_02453","SJAG_04391","SJAG_03907","SJAG_05344","SJAG_00072","SJAG_00557","SJAG_04569","SJAG_01633","SJAG_02160","SJAG_03558","SJAG_04513","SJAG_00800","SJAG_00284","SJAG_01809","SJAG_02234","SJAG_01167","SJAG_05345","SJAG_02482","SJAG_03153","SJAG_04023","SJAG_02349","SJAG_04565","SJAG_04609","SJAG_04517","SJAG_01025","SJAG_02539","SJAG_00906","SJAG_00104","SJAG_02177","SJAG_04644","SJAG_01939","SJAG_02282","SJAG_00108","SJAG_04002","SJAG_01508","SJAG_02805","SJAG_00379","SJAG_00192"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79419,114772,62748,114984],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58571,80063,110292,76236],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[66590,58983],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[81589,75603],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[68434,96049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030665"},{"annotations":[75413,81706,95089,65275,79816,80132,72626,100344,109072],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[58152,64261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030663"},{"annotations":[80262,77424,76976,76618,78890,74782,73107,78314,73229,97392],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[75670,102989,72206,68769,77899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00557":null,"SJAG_00800":null,"SJAG_00906":null,"SJAG_01025":null,"SJAG_01167":null,"SJAG_01508":null,"SJAG_01633":null,"SJAG_01809":null,"SJAG_01939":null,"SJAG_02160":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02805":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"coated vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0030662","terms_by_termid":{"GO:0012507":null,"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030663":null,"GO:0030665":null}}


id: PBO:0048754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerate kinase","termid":"PBO:0048754"}


id: GO:0047971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-guanidinobutanoate + H2O = 4-aminobutanoate + urea.","definition_xrefs":["RHEA:19501","EC:3.5.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"guanidinobutyrase activity","secondary_identifiers":["MetaCyc:GUANIDINOBUTYRASE-RXN","KEGG_REACTION:R01990"],"synonyms":[{"name":"4-guanidinobutanoate amidinohydrolase activity","type":"related"},{"name":"4-guanidinobutyrate amidinobutyrase activity","type":"related"},{"name":"G-base activity","type":"related"},{"name":"GBH","type":"related"},{"name":"gamma-guanidinobutyrate amidinohydrolase activity","type":"related"},{"name":"gamma-guanidobutyrase activity","type":"related"},{"name":"guanidinobutyrate ureahydrolase activity","type":"related"}],"termid":"GO:0047971"}


id: PBO:0068107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 414","termid":"PBO:0068107"}


id: MONDO:0022732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chorea minor (obsolete MONDO:0022732)","termid":"MONDO:0022732","xrefs":{"Monarch":{"xref_id":"0022732"}}}


id: PBO:0091024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromo/chromo shadow domain family","termid":"PBO:0091024"}


id: GO:0018107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["RESID:AA0038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}


id: MONDO:0016176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"axonal polyneuropathy associated with IgG/IgM/IgA monoclonal gammopathy","secondary_identifiers":["MEDGEN:1842867","Orphanet:209004","UMLS:C5680822","GARD:20415"],"termid":"MONDO:0016176","xrefs":{"Monarch":{"xref_id":"0016176"}}}


id: GO:0002935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine37 in tRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine37 in tRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:22891362","RHEA:43332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016740","GO:0140101","GO:0016741","GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"tRNA (adenine(37)-C2)-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-7007"],"synonyms":[{"name":"tRNA (adenine(37)-C(2))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenosine(37)-C2-)-methyltransferase activity","type":"exact"}],"termid":"GO:0002935"}


id: MONDO:0005543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune hepatitis characterized by the presence of antinuclear antibody (ANA) and antismooth-muscle antibody (ASMA).","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hepatitis","termid":"MONDO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"autoimmune hepatitis type 1","secondary_identifiers":["ICD9:571.49","Orphanet:563576","SCTID:197284004","GARD:22251","icd11.foundation:260422751","MEDGEN:928833","SCTID:721711009","UMLS:C4303164"],"synonyms":[{"name":"autoimmune hepatitis type 1","type":"exact"},{"name":"type 1 AIH","type":"exact"}],"termid":"MONDO:0005543","xrefs":{"Monarch":{"xref_id":"0005543"}}}


id: GO:0035948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of gluconeogenesis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17875938","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035948)","synonyms":[{"name":"regulation of gluconeogenesis by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthetic process by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of glucose biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of glucose biosynthetic process by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthetic process by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthetic process by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035948"}


id: FYPO:0002203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells in which the cell diameter is larger than normal and the cell length is shorter than normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, stubby cells (obsolete FYPO:0002203)","synonyms":[{"name":"inviable microcolony, stubby vegetative cells","type":"exact"}],"termid":"FYPO:0002203"}


id: MONDO:0021515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the ethmoid sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"ethmoidal sinus neoplasm","termid":"MONDO:0001764"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of ethmoidal sinus","secondary_identifiers":["NCIT:C4417","MEDGEN:91050","UMLS:C0345670","ICD9:212.0","SCTID:92093000"],"synonyms":[{"name":"benign ethmoid sinus neoplasm","type":"exact"},{"name":"benign ethmoid sinus tumor","type":"exact"},{"name":"benign ethmoid sinus tumour","type":"exact"},{"name":"benign ethmoidal sinus neoplasm","type":"exact"},{"name":"benign ethmoidal sinus tumor","type":"exact"},{"name":"benign ethmoidal sinus tumour","type":"exact"},{"name":"benign neoplasm of ethmoid sinus","type":"exact"},{"name":"benign neoplasm of the ethmoid sinus","type":"exact"},{"name":"benign neoplasm of the ethmoidal sinus","type":"exact"},{"name":"benign tumor of ethmoid sinus","type":"exact"},{"name":"benign tumor of ethmoidal sinus","type":"exact"},{"name":"benign tumor of the ethmoid sinus","type":"exact"},{"name":"benign tumor of the ethmoidal sinus","type":"exact"},{"name":"benign tumour of ethmoid sinus","type":"exact"},{"name":"benign tumour of ethmoidal sinus","type":"exact"},{"name":"benign tumour of the ethmoid sinus","type":"exact"},{"name":"benign tumour of the ethmoidal sinus","type":"exact"},{"name":"ethmoid sinus benign neoplasm","type":"exact"}],"termid":"MONDO:0021515","xrefs":{"Monarch":{"xref_id":"0021515"}}}


id: PBO:0045844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 34","termid":"PBO:0045844"}


id: PATO:0001481
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having an oblique or slanted direction.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sloped","termid":"PATO:0001481"}


id: PBO:0059182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoregulin","termid":"PBO:0059182"}


id: PBO:0041202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD31 homolog pseudogene 2","termid":"PBO:0041202"}


id: PBO:0044466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily Z member 1","termid":"PBO:0044466"}


id: PR:Q09696
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmc2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.04","synonyms":[{"name":"RNA polymerase II Mediator complex protein pmc2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pmc2","type":"exact"},{"name":"mediator complex subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09696"}


id: FYPO:0000339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in an abnormal location. The normal location is at the midpoint of the long axis of the cell. The site of septum assembly is normally determined by the location of the actomyosin contractile ring.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"},{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"},{"relation_name":"output_of","term_name":"abnormal actomyosin contractile ring localization","termid":"FYPO:0000033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000631","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"mislocalized septum during vegetative growth","secondary_identifiers":["FYPO:0002154"],"synonyms":[{"name":"abnormal contractile ring localization resulting in abnormal septum site selection","type":"related"},{"name":"abnormal contractile ring localization resulting in mislocalized septum","type":"related"},{"name":"abnormal division septum site selection","type":"related"},{"name":"abnormal septum localization during vegetative growth","type":"related"},{"name":"abnormal septum location during vegetative growth","type":"exact"},{"name":"abnormal septum position during vegetative growth","type":"exact"},{"name":"abnormal septum positioning during vegetative growth","type":"related"},{"name":"abnormal septum postitioning","type":"exact"},{"name":"abnormal septum site selection","type":"related"},{"name":"abnormal septum site selection during mitotic cell cycle","type":"related"},{"name":"abnormal septum site selection during vegetative growth","type":"related"},{"name":"asymmetric septum during vegetative growth","type":"exact"},{"name":"asymmetrically located septum during vegetative growth","type":"exact"},{"name":"mislocalised septum during vegetative growth","type":"exact"},{"name":"mislocalized septum during mitotic cell cycle","type":"related"},{"name":"misplaced septum during vegetative growth","type":"exact"},{"name":"septum site selection defects","type":"related"}],"termid":"FYPO:0000339"}


id: PBO:0042493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH13 antisense RNA 1","termid":"PBO:0042493"}


id: FYPO:0003364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell has a nucleus in an abnormal location during mating. The normal location of a single nucleus is at the midpoint of the long axis of the cell during vegetative growth, and during mating, the nucleus migrates towards the mating projection.","definition_xrefs":["PMID:7791776","PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"mislocalized nucleus during mating","synonyms":[{"name":"abnormal nucleus location during mating","type":"exact"},{"name":"abnormal nucleus position during mating","type":"exact"},{"name":"displaced nucleus during mating","type":"exact"},{"name":"mislocalised nucleus during mating","type":"exact"},{"name":"mislocalized nucleus during conjugation with cellular fusion","type":"exact"},{"name":"misplaced nuclei during mating","type":"exact"},{"name":"misplaced nucleus during mating","type":"exact"},{"name":"nuclear displacement during mating","type":"exact"}],"termid":"FYPO:0003364"}


id: GO:1900788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pseurotin A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pseurotin A metabolic process","synonyms":[{"name":"Pseurotin metabolic process","type":"related"},{"name":"Pseurotin metabolism","type":"related"},{"name":"pseurotin A metabolism","type":"exact"}],"termid":"GO:1900788"}


id: PBO:0077094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1A interacting lncRNA, retroperitoneal liposarcoma associated","termid":"PBO:0077094"}


id: GO:0018226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-S-farnesyl-L-cysteine; formation of S-farnesycysteine may be coupled with subsequent cleavage of a carboxy-terminal tripeptide for the CXXX motif and methyl esterification of the farnesylated cysteine; the residue may be found at the first position in the sequence motif C-X-X-(SAQCMT)* where the second and third positions are usually aliphatic.","definition_xrefs":["RESID:AA0102"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-S-farnesyl-L-cysteine biosynthetic process from peptidyl-cysteine (obsolete GO:0018226)","synonyms":[{"name":"peptidyl-S-farnesyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-farnesyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-farnesyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018226"}


id: PR:O60168
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lcl3 gene.","definition_xrefs":["UniProtKB:O60168","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease C19F8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.04c","synonyms":[{"name":"Spom972h-lcl3","type":"exact"}],"termid":"PR:O60168"}


id: PBO:0085025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitric oxide oxidoreductase; flavohemoglobin that plays role in oxidative and nitrosative stress responses; protects against nitration of cellular targets and against cell growth inhibition under aerobic or anaerobic conditions; yeast flavohemoglobin Yhb1p and human homolog neuroglobin NGB protect cells against alpha-synuclein cytotoxicity and aggregate formation; protein increases in abundance, relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0085025"}


id: PBO:0036299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom6 (predicted)","termid":"PBO:0036299"}


id: PBO:0064126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKHD1 ciliary IPT domain containing fibrocystin/polyductin","termid":"PBO:0064126"}


id: PBO:0070737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 7","termid":"PBO:0070737"}


id: PBO:0066005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator","termid":"PBO:0066005"}


id: FYPO:0009042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sorbitol than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to sorbitol","synonyms":[{"name":"resistance to sorbitol during mitotic cell cycle","type":"related"},{"name":"resistance to sorbitol during vegetative growth","type":"exact"},{"name":"resistant to sorbitol","type":"exact"}],"termid":"FYPO:0009042"}


id: MONDO:0023679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hematohidrosis is a rare condition characterized by blood oozing from intact skin and mucosa. Signs and symptoms include sweating blood, crying bloody tears, bleeding from the nose, bleeding from the ears, or oozing bloodfrom other skin surfaces. The episodes are usually self-limiting.","definition_xrefs":["GARD:0013131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hematohidrosis","secondary_identifiers":["UMLS:C0473554","SCTID:238757003","GARD:13131","MEDGEN:633305","ICD9:705.89"],"synonyms":[{"name":"Hematidrosis","type":"related"},{"name":"Hematohidrosis","type":"related"}],"termid":"MONDO:0023679","xrefs":{"Monarch":{"xref_id":"0023679"}}}


id: PBO:0074077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 1","termid":"PBO:0074077"}


id: PATO:0001654
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning with respect to an additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alignment","termid":"PATO:0001652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misaligned with","synonyms":[{"name":"misaligned ","type":"exact"},{"name":"unaligned with","type":"exact"}],"termid":"PATO:0001654"}


id: PBO:0084435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; transcription factor; part of the complex locus MAL6, plays a positive role in the regulation of maltose fermentation","termid":"PBO:0084435"}


id: GO:0030580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a methyl group from S-adenosylmethionine during the synthesis of quinone cofactors such as ubiquinone (coenzyme Q), menaquinone (vitamin K2), plastoquinone and phylloquinone (vitamin K1).","definition_xrefs":["GOC:mb"],"gene_count":0,"genotype_count":0,"name":"obsolete quinone cofactor methyltransferase activity (obsolete GO:0030580)","termid":"GO:0030580"}


id: PBO:0040940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 11","termid":"PBO:0040940"}


id: MONDO:0015782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysmorphism-cleft palate-loose skin syndrome is a rare, genetic developmental defect during embryogenesis characterized by severe psychomotor delay, intellectual disability, congential, symmetrical circumferential skin creases of arms and legs, cleft palate, and facial dysmorphism (incl. elongated face, high forehead, blepharophimosis, short palpebral fissures, microphthalmia, microcornea, epicanthic folds, telecanthus, microtia, posteriorly angulated ears, broad nasal bridge, microstomia and micrognathia). Additional features reported include short stature, microcephaly, hypotonia, pectus excavatum, severe scoliosis, hypoplastic scrotum, and mixed hearing loss.","definition_xrefs":["Orphanet:1779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysmorphism-cleft palate-loose skin syndrome","secondary_identifiers":["MEDGEN:1642311","GARD:2009","UMLS:C4706366"],"termid":"MONDO:0015782","xrefs":{"Monarch":{"xref_id":"0015782"}}}


id: FYPO:0008402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which septum assembly happens during the first division of the meiotic cell cycle.","definition_xrefs":["PMID:16787941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"septum assembly during meiosis I","termid":"FYPO:0008402"}


id: PBO:0056576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microspherule protein 1","termid":"PBO:0056576"}


id: GO:0009221
data:
  {"annotated_genes":["SJAG_02874","SJAG_04487","SJAG_03771","SJAG_04665","SJAG_04657","SJAG_00885","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109206,97370,94298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[72799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[71666,81280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[72800,70221,94299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[72798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[81303,71665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyrimidine deoxyribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide biosynthetic process","termid":"GO:0009265"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY0-166"],"synonyms":[{"name":"pyrimidine deoxyribonucleotide anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleotide biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleotide formation","type":"exact"},{"name":"pyrimidine deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009221","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null}}


id: MONDO:0013749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ventricular septal defect in which the cause of the disease is a mutation in the NKX2-5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect","termid":"MONDO:0002070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"ventricular septal defect 3","secondary_identifiers":["MEDGEN:482415","OMIM:614432","UMLS:C3280785"],"synonyms":[{"name":"NKX2-5 ventricular septal defect (disease)","type":"exact"},{"name":"VSD3","type":"related"},{"name":"ventricular septal defect (disease) caused by mutation in NKX2-5","type":"exact"},{"name":"ventricular septal defect 3","type":"exact"},{"name":"ventricular septal defect type 3","type":"exact"}],"termid":"MONDO:0013749","xrefs":{"Monarch":{"xref_id":"0013749"}}}


id: FYPO:0005041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a greater extent than normal.","definition_xrefs":["GO:0071619","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","synonyms":[{"name":"increased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"increased phosphorylation of RNA polymerase II CTD serine 2 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0005041"}


id: GO:0036092
data:
  {"annotated_genes":["SJAG_04545","SJAG_00114","SJAG_02289","SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62273,62407,64018,73328],"is_not":false,"summary":null,"term":"GO:0036092"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol-3-phosphate, a phosphatidylinositol monophosphate carrying the phosphate group at the 3-position.","definition_xrefs":["GOC:vw","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate biosynthetic process","termid":"GO:0046854"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_00114":null,"SJAG_02289":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol-3-phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000108":null},"synonyms":[{"name":"PI(3)P biosynthesis","type":"exact"},{"name":"PtdIns3P biosynthesis","type":"exact"},{"name":"phosphatidylinositol-3-phosphate anabolism","type":"exact"},{"name":"phosphatidylinositol-3-phosphate biosynthesis","type":"exact"},{"name":"phosphatidylinositol-3-phosphate formation","type":"exact"},{"name":"phosphatidylinositol-3-phosphate synthesis","type":"exact"}],"termid":"GO:0036092","terms_by_termid":{"GO:0036092":null}}


id: MONDO:0968974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-cell lymphoma that is characterized by large lymphoid cells of the B-cell lineage that by definition form sheets or clusters.","definition_xrefs":["DOID:0081452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell neoplasm","termid":"MONDO:0004095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"large B-cell lymphoma","secondary_identifiers":["MEDGEN:1853176","UMLS:C5212315"],"termid":"MONDO:0968974","xrefs":{"Monarch":{"xref_id":"0968974"}}}


id: PBO:0086719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene identified in a screen for mutants affected in mannosylphophorylation of cell wall components","termid":"PBO:0086719"}


id: PBO:0063418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 3A","termid":"PBO:0063418"}


id: PBO:0044933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase zeta","termid":"PBO:0044933"}


id: PBO:0116860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome-releasing factor 2, mitochondrial Gfm2/Mef2","termid":"PBO:0116860"}


id: MONDO:0023557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process affecting the vagina. Symptoms include pain and purulent discharge.","definition_xrefs":["NCIT:C84353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginitis","termid":"MONDO:0002234"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infective vaginitis","secondary_identifiers":["MEDGEN:140795","SCTID:237091009","UMLS:C0404521","icd11.foundation:1436361154"],"synonyms":[{"name":"Infective vaginitis","type":"related"},{"name":"PV - Vaginal infection","type":"related"},{"name":"Vaginal Infection","type":"related"},{"name":"Vaginal infection","type":"related"},{"name":"vaginal infection","type":"exact"}],"termid":"MONDO:0023557","xrefs":{"Monarch":{"xref_id":"0023557"}}}


id: PBO:0064670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 5","termid":"PBO:0064670"}


id: PBO:0035889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_processing_during_vegetative_growth","termid":"PBO:0035889"}


id: PBO:0057119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 203b","termid":"PBO:0057119"}


id: PBO:0056449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3 pseudogene 1","termid":"PBO:0056449"}


id: PBO:0034811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRP-like ion calcium channel Trp1322","termid":"PBO:0034811"}


id: PBO:0088888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic methionine-tRNA ligase Mrs1","termid":"PBO:0088888"}


id: PBO:0047842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase","termid":"PBO:0047842"}


id: PBO:0049619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 22","termid":"PBO:0049619"}


id: GO:0005779
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the peroxisomal membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of peroxisomal membrane (obsolete GO:0005779)","synonyms":[{"name":"integral to peroxisomal membrane","type":"narrow"}],"termid":"GO:0005779"}


id: PBO:0069384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 644, pseudogene","termid":"PBO:0069384"}


id: null:NCBI Taxonomy id
data:
  {"annotation_feature_type":"gene","cv_name":"organism property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxon_id","termid":"null:NCBI Taxonomy id"}


id: MONDO:0017736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"disorder of sialic acid metabolism","secondary_identifiers":["ICD9:277.89","Orphanet:309319","GARD:21332","SCTID:238050009","icd11.foundation:1709765980","UMLS:C0342851","MEDGEN:575253"],"termid":"MONDO:0017736","xrefs":{"Monarch":{"xref_id":"0017736"}}}


id: PBO:0067997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 299","termid":"PBO:0067997"}


id: PBO:0071689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 21","termid":"PBO:0071689"}


id: GO:1903171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of carbon dioxide within an organism or cell.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000072","PMID:16571594"],"gene_count":0,"genotype_count":0,"name":"obsolete carbon dioxide homeostasis (obsolete GO:1903171)","termid":"GO:1903171"}


id: GO:1990937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of one or more acetyl groups to a xylan molecule.","definition_xrefs":["PMID:26745802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"},{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"xylan acetylation","termid":"GO:1990937"}


id: GO:1900294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heptasaccharide transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of heptasaccharide transport","termid":"GO:1900294"}


id: MONDO:0017858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia characterized by a predominant immature erythroid population. There are two subtypes recognized: erythroleukemia and pure erythroid leukemia. (WHO, 2001)","definition_xrefs":["NCIT:C8923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"},{"relation_name":"is_a","term_name":"erythroid neoplasm","termid":"MONDO:0020703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute erythroid leukemia","secondary_identifiers":["icd11.foundation:538743484","ICDO:9840/3","MEDGEN:7316","EFO:0000218","NANDO:2200010","SCTID:93451002","Orphanet:318","UMLS:C0023440","ICD9:205.80","MESH:D004915","DOID:0080780","icd11.foundation:631263622","GARD:9620","ICD9:207.00"],"synonyms":[{"name":"AEL","type":"exact"},{"name":"AML M6","type":"exact"},{"name":"AML-M6","type":"related"},{"name":"Di Guglielmo syndrome","type":"related"},{"name":"Di Guglielmo's syndrome","type":"related"},{"name":"Erythroleukemia","type":"related"},{"name":"FAB M6","type":"exact"},{"name":"M6 acute myeloid leukaemia","type":"exact"},{"name":"M6 acute myeloid leukemia","type":"exact"},{"name":"acute erythroblastic leukaemia","type":"exact"},{"name":"acute erythroblastic leukemia","type":"exact"},{"name":"acute erythroid leukemia","type":"exact"},{"name":"acute erythroleukemia","type":"related"},{"name":"acute erythroleukemia M6a subtype","type":"related"},{"name":"acute erythroleukemia M6b subtype","type":"related"},{"name":"acute myeloid leukaemia FAB-M6","type":"related"},{"name":"acute myeloid leukaemia M6","type":"exact"},{"name":"acute myeloid leukemia FAB-M6","type":"related"},{"name":"acute myeloid leukemia M6","type":"exact"},{"name":"erythroblastic leukaemia","type":"exact"},{"name":"erythroblastic leukemia","type":"exact"},{"name":"leukemia, erythroid, malignant","type":"exact"}],"termid":"MONDO:0017858","xrefs":{"Monarch":{"xref_id":"0017858"}}}


id: MONDO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the vestibulocochlear nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant cranial nerve neoplasm","termid":"MONDO:0002433"},{"relation_name":"is_a","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"vestibulocochlear nerve neoplasm","termid":"MONDO:0021221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant neoplasm of acoustic nerve","secondary_identifiers":["DOID:2814","SCTID:254980001","UMLS:C0346331","NCIT:C4539","MEDGEN:83418"],"synonyms":[{"name":"cancer of the vestibulocochlear nerve","type":"exact"},{"name":"cancer of vestibulocochlear nerve","type":"exact"},{"name":"malignant acoustic nerve neoplasm","type":"exact"},{"name":"malignant acoustic nerve tumor","type":"exact"},{"name":"malignant acoustic nerve tumour","type":"exact"},{"name":"malignant eighth cranial nerve neoplasm","type":"exact"},{"name":"malignant eighth cranial nerve tumor","type":"exact"},{"name":"malignant eighth cranial nerve tumour","type":"exact"},{"name":"malignant neoplasm of eighth cranial nerve","type":"exact"},{"name":"malignant neoplasm of the acoustic nerve","type":"exact"},{"name":"malignant neoplasm of the eighth cranial nerve","type":"exact"},{"name":"malignant neoplasm of the vestibulocochlear nerve","type":"exact"},{"name":"malignant neoplasm of vestibulocochlear nerve","type":"exact"},{"name":"malignant tumor of acoustic nerve","type":"exact"},{"name":"malignant tumor of acoustic vestibular nerve","type":"exact"},{"name":"malignant tumor of eighth cranial nerve","type":"exact"},{"name":"malignant tumor of the acoustic nerve","type":"exact"},{"name":"malignant tumor of the eighth cranial nerve","type":"exact"},{"name":"malignant tumor of the vestibulocochlear nerve","type":"exact"},{"name":"malignant tumor of vestibulocochlear nerve","type":"exact"},{"name":"malignant tumour of acoustic nerve","type":"exact"},{"name":"malignant tumour of acoustic vestibular nerve","type":"exact"},{"name":"malignant tumour of eighth cranial nerve","type":"exact"},{"name":"malignant tumour of the acoustic nerve","type":"exact"},{"name":"malignant tumour of the eighth cranial nerve","type":"exact"},{"name":"malignant tumour of the vestibulocochlear nerve","type":"exact"},{"name":"malignant tumour of vestibulocochlear nerve","type":"exact"},{"name":"malignant vestibulocochlear nerve neoplasm","type":"exact"},{"name":"malignant vestibulocochlear nerve tumor","type":"exact"},{"name":"malignant vestibulocochlear nerve tumour","type":"exact"},{"name":"vestibulocochlear nerve cancer","type":"exact"}],"termid":"MONDO:0002432","xrefs":{"Monarch":{"xref_id":"0002432"}}}


id: MONDO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant epithelial tumor of the female reproductive system characterized by the presence of glands and/or cysts lined by neoplastic cells that resemble endometrial cells.","definition_xrefs":["NCIT:C7113"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrioid tumor","secondary_identifiers":["DOID:3001","MEDGEN:105374","UMLS:C0474809"],"synonyms":[{"name":"endometrioid neoplasm","type":"exact"},{"name":"endometrioid neoplasm of female reproductive system","type":"exact"},{"name":"endometrioid neoplasm of the female reproductive system","type":"exact"},{"name":"endometrioid tumor","type":"exact"},{"name":"endometrioid tumor (morphologic abnormality)","type":"exact"},{"name":"endometrioid tumor of female reproductive system","type":"exact"},{"name":"endometrioid tumor of the female reproductive system","type":"exact"},{"name":"endometrioid tumour (morphologic abnormality)","type":"exact"},{"name":"endometrioid tumour of female reproductive system","type":"exact"},{"name":"endometrioid tumour of the female reproductive system","type":"exact"},{"name":"female reproductive endometrioid cancer","type":"related"},{"name":"female reproductive endometrioid neoplasm","type":"exact"},{"name":"female reproductive endometrioid tumor","type":"exact"},{"name":"female reproductive endometrioid tumour","type":"exact"}],"termid":"MONDO:0002480","xrefs":{"Monarch":{"xref_id":"0002480"}}}


id: PBO:0061259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like B","termid":"PBO:0061259"}


id: MONDO:0005160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ruptured aneurysm located in the wall of the proximal portion of the descending aorta proceeding from the arch of the aorta.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm","secondary_identifiers":["EFO:0001666","ICD9:441.5","MESH:D001014","NANDO:2200294","SCTID:73067008","UMLS:C0003486","DOID:3627","ICD9:441.1","ICD9:441.6","HP:0004942","NANDO:2100101","MEDGEN:362","ICD9:441.3"],"synonyms":[{"name":"abdominal aortic aneurysm, ruptured","type":"exact"},{"name":"aortic aneurysm","type":"exact"},{"name":"aortic aneurysm (disease)","type":"exact"},{"name":"aortic aneurysm of unspecified site, ruptured","type":"exact"},{"name":"ruptured abdominal aortic aneurysm","type":"exact"},{"name":"ruptured aortic aneurysm","type":"exact"},{"name":"ruptured thoracic aneurysm","type":"exact"},{"name":"ruptured thoracic aortic aneurysm","type":"exact"},{"name":"ruptured thoracoabdominal aortic aneurysm","type":"exact"},{"name":"thoracic aortic aneurysm which HAS ruptured","type":"exact"},{"name":"thoracic aortic aneurysm, ruptured","type":"exact"},{"name":"thoracoabdominal aortic aneurysm, ruptured","type":"exact"}],"termid":"MONDO:0005160","xrefs":{"Monarch":{"xref_id":"0005160"}}}


id: MONDO:0009255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Galactokinase deficiency is a rare mild form of galactosemia characterized by early onset of cataract and an absence of the usual signs of classic galactosemia, i.e. feeding difficulties, poor weight gain and growth, lethargy, and jaundice.","definition_xrefs":["Orphanet:79237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosemia","termid":"MONDO:0018116"},{"relation_name":"is_a","term_name":"disorder of galactose and fructose metabolism","termid":"MONDO:0800152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0005328"],"is_obsolete":false,"name":"galactokinase deficiency","secondary_identifiers":["MEDGEN:120614","NANDO:2200533","SCTID:124302001","NCIT:C114767","UMLS:C0268155","GARD:2422","DOID:14695","icd11.foundation:1173858031","OMIM:230200"],"synonyms":[{"name":"GALK deficiency","type":"exact"},{"name":"GALK-D","type":"exact"},{"name":"Galk deficiency","type":"related"},{"name":"galactokinase deficiency","type":"exact"},{"name":"galactokinase deficiency galactosemia","type":"exact"},{"name":"galactokinase deficiency with cataracts","type":"exact"},{"name":"galactosemia 2","type":"related"},{"name":"galactosemia II","type":"exact"},{"name":"galactosemia type 2","type":"exact"},{"name":"hereditary galactokinase deficiency","type":"related"}],"termid":"MONDO:0009255","xrefs":{"Monarch":{"xref_id":"0009255"}}}


id: PBO:0064280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M1 pseudogene 1","termid":"PBO:0064280"}


id: FYPO:0007215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more lncRNA genes is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to chromatin at lncRNA gene","synonyms":[{"name":"abolished protein localisation to chromatin at lncRNA gene during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at lncRNA gene during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at long non-coding RNA gene","type":"exact"},{"name":"protein localization to chromatin at lncRNA gene abolished","type":"exact"}],"termid":"FYPO:0007215"}


id: FYPO:0002723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular pigment accumulation is increased during a cellular response to cadmium ion.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular pigment accumulation","termid":"FYPO:0000741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular pigment accumulation during cellular response to cadmium ion","synonyms":[{"name":"abnormal cellular pigment accumulation during cellular response to cadmium ion","type":"exact"},{"name":"altered colony color during cellular response to cadmium ion","type":"related"},{"name":"altered colony colour during cellular response to cadmium ion","type":"related"},{"name":"increased cellular pigment accumulation during cellular response to cadmium","type":"exact"},{"name":"increased cellular pigment accumulation during cellular response to cadmium ion during mitotic cell cycle","type":"related"},{"name":"increased cellular pigment accumulation during cellular response to cadmium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0002723"}


id: MONDO:0800428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dengue shock syndrome, susceptibility to","secondary_identifiers":["MEDGEN:482215","UMLS:C3280585"],"termid":"MONDO:0800428","xrefs":{"Monarch":{"xref_id":"0800428"}}}


id: PBO:0042698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 3B","termid":"PBO:0042698"}


id: GO:0006769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide, pyridine-3-carboxamide, the amide of nicotinic acid. It is a member of the B complex of vitamins and occurs widely in living organisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"nicotinamide metabolic process","secondary_identifiers":["MetaCyc:PWY-5083"],"synonyms":[{"name":"niacin metabolic process","type":"related"},{"name":"niacin metabolism","type":"related"},{"name":"nicotinamide metabolism","type":"exact"},{"name":"vitamin B3 metabolic process","type":"broad"},{"name":"vitamin B3 metabolism","type":"broad"}],"termid":"GO:0006769"}


id: MONDO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Prunus persica.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete peach allergy (obsolete MONDO:0000785)","secondary_identifiers":["DOID:0060510"],"synonyms":[{"name":"Prunus persica allergic disease","type":"exact"},{"name":"Prunus persica caused allergic disease","type":"exact"},{"name":"Prunus persica fruit allergy","type":"exact"},{"name":"allergy of Prunus persica","type":"exact"}],"termid":"MONDO:0000785","xrefs":{"Monarch":{"xref_id":"0000785"}}}


id: PBO:0002856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4","termid":"PBO:0002856"}


id: PBO:0059022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 11","termid":"PBO:0059022"}


id: PBO:0058871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9903","termid":"PBO:0058871"}


id: GO:0042676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cone cells of the compound eye, the lens-secreting cells in the ommatidia, adopt pathways of differentiation that lead to the establishment of their distinct cell type.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"compound eye cone cell differentiation","termid":"GO:0042675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye cone cell fate commitment","secondary_identifiers":["GO:0007466"],"termid":"GO:0042676"}


id: MONDO:0014081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency due to CARD11 deficiency is a rare combined T and B cell immunodeficiency characterized by normal numbers of T and B lymphocytes, increased numbers of transitional B cells and hypo- to agammaglobulinemia, decreased numbers of regulatory T cells and defects in T-cell functions. It presents with severe susceptibility to infections, including opportunistic infections.","definition_xrefs":["Orphanet:357237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T+ B+ severe combined immunodeficiency","termid":"MONDO:0044201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency due to CARD11 deficiency","secondary_identifiers":["DOID:0111957","OMIM:615206","GARD:17549","MEDGEN:767600","UMLS:C3554686"],"synonyms":[{"name":"CARD11 immunodeficiency","type":"related"},{"name":"IMD11","type":"related"},{"name":"IMD11A","type":"related"},{"name":"SCID due to CARD11 deficiency","type":"exact"},{"name":"immunodeficiency 11","type":"related"},{"name":"immunodeficiency 11A","type":"exact"},{"name":"immunodeficiency type 11","type":"exact"}],"termid":"MONDO:0014081","xrefs":{"Monarch":{"xref_id":"0014081"}}}


id: PBO:0051083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant gamma 1 (G1m marker)","termid":"PBO:0051083"}


id: MONDO:0014578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the LRP4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 17","secondary_identifiers":["UMLS:C4225377","GARD:16080","DOID:0110674","MEDGEN:895078","OMIM:616304"],"synonyms":[{"name":"CMS17","type":"exact"},{"name":"LRP4 congenital myasthenic syndrome","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in LRP4","type":"exact"},{"name":"congenital myasthenic syndrome type 17","type":"exact"},{"name":"myasthenic syndrome, congenital, 17","type":"related"},{"name":"myasthenic syndrome, congenital, type 17","type":"exact"}],"termid":"MONDO:0014578","xrefs":{"Monarch":{"xref_id":"0014578"}}}


id: GO:0004994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with somatostatin to initiate a change in cell activity. Somatostatin is a peptide hormone that regulates the endocrine system by signaling via G protein-coupled somatostatin receptors. Somatostatin has two active forms produced by proteolytic cleavage: a 14 amino acid peptide (SST-14) and a 28 amino acid peptide (SST-28).","definition_xrefs":["Wikipedia:Somatostatin","GOC:ai","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"somatostatin receptor activity","synonyms":[{"name":"GHIH receptor activity","type":"exact"},{"name":"SRIF receptor activity","type":"exact"},{"name":"SST receptor activity","type":"exact"},{"name":"growth hormone-inhibiting hormone receptor activity","type":"exact"},{"name":"somatotrophin release inhibiting factor receptor activity","type":"exact"}],"termid":"GO:0004994"}


id: FYPO:0002420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce cell that has an abnormal shape and undergoes a single round of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, abnormal cell shape","synonyms":[{"name":"inviable following spore germination, single cell division, abnormal cell shape","type":"exact"},{"name":"inviable germinated spore, single cell division, abnormal cell shape","type":"exact"},{"name":"lethal after spore germination, single cell division, abnormal cell shape","type":"exact"}],"termid":"FYPO:0002420"}


id: PATO:0000840
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000840 absolute auditory acuity value (obsolete PATO:0000840)","termid":"PATO:0000840"}


id: MONDO:0006956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of infectious diseases that is caused by Rickettsia.","definition_xrefs":["NCIT:C34991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rickettsiosis","secondary_identifiers":["EFO:1001162","MESH:D012282","Orphanet:102021","ICD9:083.9","MedDRA:10061495","MEDGEN:20584","SCTID:37246009","UMLS:C0035585","GARD:19827","ICD10CM:A75-A79"],"synonyms":[{"name":"Rickettsia caused disease or disorder","type":"exact"},{"name":"Rickettsia disease or disorder","type":"exact"},{"name":"Rickettsia infection","type":"exact"},{"name":"Rickettsia infectious disease","type":"exact"},{"name":"Rickettsiae disease","type":"exact"},{"name":"Rickettsial disease","type":"exact"},{"name":"Rickettsial infectious disease","type":"exact"},{"name":"Rickettsial infectious disorder","type":"exact"},{"name":"Rickettsiosis","type":"exact"},{"name":"infection, Rickettsia","type":"exact"},{"name":"infections, Rickettsia","type":"exact"}],"termid":"MONDO:0006956","xrefs":{"Monarch":{"xref_id":"0006956"}}}


id: PBO:0005637
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.8","termid":"PBO:0005637"}


id: GO:0045923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of fatty acid metabolic process","synonyms":[{"name":"activation of fatty acid metabolic process","type":"narrow"},{"name":"positive regulation of fatty acid metabolism","type":"exact"},{"name":"stimulation of fatty acid metabolic process","type":"narrow"},{"name":"up regulation of fatty acid metabolic process","type":"exact"},{"name":"up-regulation of fatty acid metabolic process","type":"exact"},{"name":"upregulation of fatty acid metabolic process","type":"exact"}],"termid":"GO:0045923"}


id: GO:0036390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the bacterial pre-replicative complex, a protein-DNA complex that forms at the bacterial oriC during the initial step of DNA replication and allows the origin to become competent, or 'licensed', for replication.","definition_xrefs":["PMID:21035377","GOC:bhm","PMID:19833870","GOC:jh2","PMID:21895796","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex assembly involved in cell cycle DNA replication","termid":"GO:1902299"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0065003","GO:0006259","GO:0008150","GO:0007049","GO:0044085","GO:0006260"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in bacterial-type DNA replication","synonyms":[{"name":"bacterial pre-RC assembly","type":"exact"},{"name":"bacterial pre-replicative complex assembly","type":"exact"}],"termid":"GO:0036390"}


id: GO:0140979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nucleotides within a cell.","definition_xrefs":["PMID:23416111","PMID:34880500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nucleotide homeostasis","termid":"GO:0140979"}


id: PBO:0069297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 553, pseudogene","termid":"PBO:0069297"}


id: PBO:0001906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor Sak1","termid":"PBO:0001906"}


id: PR:O94693
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CD2 cytoplasmic tail-binding protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02904","PANTHER:PTHR13138:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIN1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.09c","secondary_identifiers":["UniProtKB:O94693"],"synonyms":[{"name":"Spom972h-CD2BP2","type":"exact"}],"termid":"PR:O94693"}


id: GO:0034244
data:
  {"annotated_genes":["SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119948],"is_not":false,"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription, elongation","termid":"GO:0032785"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase II","termid":"GO:0034243"},{"relation_name":"negatively_regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090041"],"synonyms":[{"name":"negative regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0034244","terms_by_termid":{"GO:0034244":null}}


id: PBO:0039399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 4","termid":"PBO:0039399"}


id: PBO:0040330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 5","termid":"PBO:0040330"}


id: PBO:0003708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 2 (predicted)","termid":"PBO:0003708"}


id: PBO:0042891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor B","termid":"PBO:0042891"}


id: PBO:0004156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, SYF2 family (predicted)","termid":"PBO:0004156"}


id: MONDO:0002309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conjunctivitis that is characterized by the formation of papillae on the palpebral conjunctiva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctivitis","termid":"MONDO:0003799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"papillary conjunctivitis","secondary_identifiers":["MEDGEN:167698","NCIT:C35616","DOID:2458","ICD9:372.39","SCTID:416878008","UMLS:C0854165","icd11.foundation:392841027"],"termid":"MONDO:0002309","xrefs":{"Monarch":{"xref_id":"0002309"}}}


id: GO:0006175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009216"},{"relation_name":"is_a","term_name":"dATP metabolic process","termid":"GO:0046060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dATP biosynthetic process","synonyms":[{"name":"dATP anabolism","type":"exact"},{"name":"dATP biosynthesis","type":"exact"},{"name":"dATP formation","type":"exact"},{"name":"dATP synthesis","type":"exact"}],"termid":"GO:0006175"}


id: PBO:0108707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp3","termid":"PBO:0108707"}


id: PBO:0073229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 2","termid":"PBO:0073229"}


id: FYPO:0004325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 5-fluorouracil. Cells stop growing (and may die) at a concentration of 5-fluorouracil that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to 5-fluorouracil","synonyms":[{"name":"hypersensitive to 5-fluorouracil","type":"exact"},{"name":"sensitive to 5-FU","type":"exact"},{"name":"sensitive to 5-fluorouracil during mitotic cell cycle","type":"related"},{"name":"sensitive to 5-fluorouracil during vegetative growth","type":"exact"}],"termid":"FYPO:0004325"}


id: PBO:0083617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex; catalyzes the direct oxidative decarboxylation of pyruvate to acetyl-CoA; phosphorylated; regulated by glucose; PDH complex is concentrated in spots within the mitochondrial matrix, often near the ERMES complex and near peroxisomes","termid":"PBO:0083617"}


id: MONDO:0042490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant severe congenital neutropenia","termid":"MONDO:0008742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0000426"],"is_obsolete":false,"name":"neutropenia, severe congenital, 1, autosomal dominant","secondary_identifiers":["OMIM:202700","MEDGEN:348506","UMLS:C1859966","MESH:C565969","DOID:0080625"],"synonyms":[{"name":"SCN1","type":"related"},{"name":"neutropenia, severe congenital 1, autosomal dominant","type":"exact"},{"name":"neutropenia, severe congenital, 1, autosomal dominant","type":"exact"}],"termid":"MONDO:0042490","xrefs":{"Monarch":{"xref_id":"0042490"}}}


id: PBO:0067014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 23, pseudogene","termid":"PBO:0067014"}


id: PBO:0041287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 12","termid":"PBO:0041287"}


id: PBO:0027719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_lysine_methylation","termid":"PBO:0027719"}


id: PBO:0048632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 1","termid":"PBO:0048632"}


id: PBO:0038316
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_added_date","termid":"PBO:0038316"}


id: MONDO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the blood vessels.","definition_xrefs":["NCIT:C8538"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"cardiovascular cancer","termid":"MONDO:0002100"},{"relation_name":"is_a","term_name":"blood vessel neoplasm","termid":"MONDO:0021080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vascular cancer","secondary_identifiers":["Orphanet:673466","MEDGEN:264315","UMLS:C1458139","DOID:175","MESH:D009383"],"synonyms":[{"name":"Haemangiomatous tumor","type":"broad"},{"name":"Haemangiomatous tumour","type":"broad"},{"name":"blood vessel neoplasm","type":"broad"},{"name":"blood vessel tumor","type":"broad"},{"name":"blood vessel tumor (morphologic abnormality)","type":"broad"},{"name":"blood vessel tumor disorder","type":"broad"},{"name":"blood vessel tumors","type":"broad"},{"name":"blood vessel tumors (morphologic abnormality)","type":"broad"},{"name":"blood vessel tumour","type":"broad"},{"name":"blood vessel tumour (morphologic abnormality)","type":"broad"},{"name":"blood vessel tumour disorder","type":"broad"},{"name":"blood vessel tumours","type":"broad"},{"name":"blood vessel tumours (morphologic abnormality)","type":"broad"},{"name":"cancer of vasculature","type":"exact"},{"name":"leiomyosarcoma of the renal vein","type":"narrow"},{"name":"malignant blood vessel neoplasm","type":"exact"},{"name":"malignant blood vessel tumor","type":"exact"},{"name":"malignant blood vessel tumour","type":"exact"},{"name":"malignant great vessel tumour","type":"related"},{"name":"malignant neoplasm of vasculature","type":"exact"},{"name":"malignant tumor of pulmonary artery","type":"narrow"},{"name":"malignant tumor of pulmonary vein","type":"narrow"},{"name":"malignant tumour of pulmonary artery","type":"narrow"},{"name":"malignant tumour of pulmonary vein","type":"narrow"},{"name":"malignant vascular neoplasm","type":"exact"},{"name":"malignant vascular tumor","type":"exact"},{"name":"malignant vascular tumour","type":"exact"},{"name":"malignant vasculature neoplasm","type":"exact"},{"name":"neoplasm of great vessel","type":"broad"},{"name":"pulmonary artery cancer","type":"exact"},{"name":"pulmonary artery malignant neoplasm","type":"exact"},{"name":"pulmonary vein malignant neoplasm","type":"exact"},{"name":"renal vein leiomyosarcoma","type":"related"},{"name":"vascular tissue neoplasm","type":"related"},{"name":"vascular tumors","type":"broad"},{"name":"vascular tumours","type":"broad"},{"name":"vasculature cancer","type":"exact"}],"termid":"MONDO:0002095","xrefs":{"Monarch":{"xref_id":"0002095"}}}


id: PBO:0043867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cereblon","termid":"PBO:0043867"}


id: PBO:0083234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion gives MMS sensitivity, growth defect under alkaline conditions, less than optimal growth upon citric acid stress","termid":"PBO:0083234"}


id: GO:0001705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of ectoderm during gastrulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of primary germ layer","termid":"GO:0001704"},{"relation_name":"part_of","term_name":"ectoderm development","termid":"GO:0007398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectoderm formation","termid":"GO:0001705"}


id: GO:1990977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of firing from a late origin of replication involved in mitotic DNA replication.","definition_xrefs":["PMID:26436827"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitotic DNA replication initiation from late origin (obsolete GO:1990977)","termid":"GO:1990977"}


id: MONDO:0021375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the duodenum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenal disorder","termid":"MONDO:0002866"},{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"tumor of duodenum","secondary_identifiers":["MEDGEN:8503","NCIT:C2995","SCTID:126833009","UMLS:C0013291"],"synonyms":[{"name":"duodenal neoplasm","type":"exact"},{"name":"duodenal tumor","type":"exact"},{"name":"duodenal tumour","type":"exact"},{"name":"duodenum neoplasm","type":"exact"},{"name":"duodenum neoplasm (disease)","type":"exact"},{"name":"duodenum tumor","type":"exact"},{"name":"duodenum tumour","type":"exact"},{"name":"neoplasm of duodenum","type":"exact"},{"name":"neoplasm of the duodenum","type":"exact"},{"name":"tumor of duodenum","type":"exact"},{"name":"tumor of the duodenum","type":"exact"},{"name":"tumour of the duodenum","type":"exact"}],"termid":"MONDO:0021375","xrefs":{"Monarch":{"xref_id":"0021375"}}}


id: GO:0016679
data:
  {"annotated_genes":["SJAG_07006","SJAG_MIT03","SJAG_01490","SJAG_02646","SJAG_00755","SJAG_00601","SJAG_03490"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120186,119699,64963,106002,121090,109920,115393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_00755":null,"SJAG_01490":null,"SJAG_02646":null,"SJAG_03490":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.10.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors","type":"narrow"}],"termid":"GO:0016679","terms_by_termid":{"GO:0008121":null}}


id: FYPO:0003334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the septin ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to septin ring","synonyms":[{"name":"normal protein localisation to septin ring","type":"exact"},{"name":"normal protein localization to septin ring during mitotic cell cycle","type":"related"},{"name":"normal protein localization to septin ring during vegetative growth","type":"exact"}],"termid":"FYPO:0003334"}


id: PBO:0064539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin C","termid":"PBO:0064539"}


id: GO:0038152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a the C-C chemokine type 2 receptor (CCR4) on the surface of a cell binding to one of it's physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"C-C chemokine receptor CCR4 signaling pathway","synonyms":[{"name":"C-C chemokine receptor type 4 signaling pathway","type":"exact"},{"name":"chemokine receptor CCR4 signaling pathway","type":"exact"}],"termid":"GO:0038152"}


id: MONDO:1010232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydranencephaly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydranencephaly, non-human animal","secondary_identifiers":["OMIA:000486"],"termid":"MONDO:1010232","xrefs":{"Monarch":{"xref_id":"1010232"}}}


id: GO:0051015
data:
  {"annotated_genes":["SJAG_00677","SJAG_01894","SJAG_02431","SJAG_01993","SJAG_02700","SJAG_02566","SJAG_00938","SJAG_03380","SJAG_01268","SJAG_02245","SJAG_03011","SJAG_00279","SJAG_01384","SJAG_04621","SJAG_00152","SJAG_00970","SJAG_03088","SJAG_01943","SJAG_04001","SJAG_02075","SJAG_03025","SJAG_03086","SJAG_01964","SJAG_02396","SJAG_04703","SJAG_03703","SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71867,71934,72140,72871,73223,75149,76140,76673,76727,77332,77358,77817,78107,78270,78448,78526,79213,79545,79592,80793,80921,80950,81393,81567,81846,82007],"is_not":false,"summary":null,"term":"GO:0051015"},{"annotations":[79046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003786"}]},"cv_name":"molecular_function","definition":"Binding to an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin binding","termid":"GO:0003779"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00152":null,"SJAG_00279":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02245":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03380":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04498":null,"SJAG_04621":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003779"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0003779","GO:0005488","GO:0008092"],"is_obsolete":false,"name":"actin filament binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"F-actin binding","type":"exact"},{"name":"actin cross-linking activity","type":"related"}],"termid":"GO:0051015","terms_by_termid":{"GO:0003786":null,"GO:0051015":null}}


id: MONDO:0013907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bilateral generalized polymicrogyria is a rare neurological disorder that affects the cerebral cortex (the outer surface of the brain). This is the most widespread form of polymicrogyria and typically affects the entire surface of the brain. Signs and symptoms include severe intellectual disability, problems with movement, and seizures that are difficult or impossible to treat. While the exact cause of bilateral generalized polymicrogyria is not fully understood, it is thought to be due to improper brain development during embryonic growth. Most cases appear to follow an autosomal recessive pattern of inheritance. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral polymicrogyria","termid":"MONDO:0017091"},{"relation_name":"is_a","term_name":"microcephalic primordial dwarfism due to RTTN deficiency","termid":"MONDO:0018764"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral generalized polymicrogyria","secondary_identifiers":["MEDGEN:1684616","DOID:0080920","UMLS:C5139324","GARD:10786","Orphanet:208447"],"synonyms":[{"name":"MSSP","type":"related"},{"name":"PMGYS","type":"related"},{"name":"bilateral generalized polymicrogyria","type":"exact"},{"name":"microcephaly, short stature, and polymicrogyria with or without seizures","type":"related"},{"name":"microcephaly, short stature, and polymicrogyria with seizures","type":"exact"},{"name":"polymicrogyria with seizures","type":"related"}],"termid":"MONDO:0013907","xrefs":{"Monarch":{"xref_id":"0013907"}}}


id: FYPO:0004857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan endo-1,6-beta-glucosidase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal endo-1,6-beta-glucosidase activity","termid":"FYPO:0004856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased endo-1,6-beta-glucosidase activity","synonyms":[{"name":"increased glucan endo-1,6-beta-glucosidase activity","type":"exact"}],"termid":"FYPO:0004857"}


id: PBO:0113495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor 3; contains two ABC cassettes; binds and hydrolyzes ATP; interacts with mRNA independently of translation; involved in frameshifting at stalled ribosomes; YEF3 has a paralog, HEF3, that arose from the whole genome duplication","termid":"PBO:0113495"}


id: FYPO:0003928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the repair of double-strand breaks in DNA that are continually made (for example, by constitutive expression of a nuclease) results in repair junctions that differ from wild type.","definition_xrefs":["PomBase:mah","PMID:22093869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000298","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered double-strand break repair junction in presence of persistent double-strand breaks","synonyms":[{"name":"abnormal double-strand break repair resulting in formation of altered repair junction","type":"exact"},{"name":"altered pattern of repair junctions in HO survivors","type":"narrow"}],"termid":"FYPO:0003928"}


id: MONDO:0003248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pineal parenchymal cell neoplasm (pineocytoma or pineoblastoma) occurring in adults.","definition_xrefs":["NCIT:C8273"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pineal gland cancer","termid":"MONDO:0003249"},{"relation_name":"is_a","term_name":"pineal parenchymal cell neoplasm","termid":"MONDO:0024890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult pineal parenchymal tumor","secondary_identifiers":["MEDGEN:83710","UMLS:C0280794","DOID:5031"],"synonyms":[{"name":"adult pineal gland neoplasm","type":"exact"},{"name":"adult pineal gland tumor","type":"exact"},{"name":"adult pineal gland tumour","type":"exact"},{"name":"adult pineal parenchymal cell neoplasm","type":"exact"},{"name":"adult pineal parenchymal cell tumor","type":"exact"},{"name":"adult pineal parenchymal cell tumour","type":"exact"},{"name":"adult pineal parenchymal neoplasm","type":"exact"},{"name":"adult pineal parenchymal tumor","type":"exact"},{"name":"parenchymal neoplasm of adult pineal gland","type":"exact"},{"name":"parenchymal neoplasm of the adult pineal gland","type":"exact"},{"name":"parenchymal tumor of adult pineal gland","type":"exact"},{"name":"parenchymal tumor of the adult pineal gland","type":"exact"},{"name":"parenchymal tumour of adult pineal gland","type":"exact"},{"name":"parenchymal tumour of the adult pineal gland","type":"exact"},{"name":"pineal parenchymal cell neoplasm of adults","type":"exact"},{"name":"pineal parenchymal cell tumor","type":"broad"},{"name":"pineal parenchymal cell tumour","type":"broad"}],"termid":"MONDO:0003248","xrefs":{"Monarch":{"xref_id":"0003248"}}}


id: PBO:0071846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 41","termid":"PBO:0071846"}


id: PBO:0093832
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genotype_locus","termid":"PBO:0093832"}


id: MONDO:0010005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Saccharopinuria is a disorder of lysine metabolism associated with hyperlysinaemia and lysinuria.","definition_xrefs":["Orphanet:3124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysine and hydroxylysine metabolism","termid":"MONDO:0017351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"saccharopinuria","secondary_identifiers":["MESH:C537218","SCTID:111397004","MEDGEN:75693","UMLS:C0268556","GARD:314","OMIM:268700","ICD9:270.7"],"synonyms":[{"name":"Alpha-aminoadipic semialdehyde synthase deficiency","type":"related"},{"name":"hyperlysinemia type II","type":"exact"},{"name":"hyperlysinemia, type 2","type":"related"},{"name":"saccharopine dehydrogenase deficiency","type":"exact"},{"name":"saccharopinuria","type":"exact"}],"termid":"MONDO:0010005","xrefs":{"Monarch":{"xref_id":"0010005"}}}


id: PBO:0040209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL transcriptional regulator 2","termid":"PBO:0040209"}


id: GO:0090604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms grow at the surface of a liquid-air interface and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:di","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"surface biofilm formation","termid":"GO:0090604"}


id: GO:0015964
data:
  {"annotated_genes":["SJAG_04939","SJAG_04169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113431,119100],"is_not":false,"summary":null,"term":"GO:0015964"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diadenosine triphosphate, a derivative of the nucleoside adenosine with three phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate catabolic process","termid":"GO:0015961"},{"relation_name":"is_a","term_name":"diadenosine triphosphate metabolic process","termid":"GO:0015962"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04169":null,"SJAG_04939":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"diadenosine triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine triphosphate breakdown","type":"exact"},{"name":"diadenosine triphosphate catabolism","type":"exact"},{"name":"diadenosine triphosphate degradation","type":"exact"}],"termid":"GO:0015964","terms_by_termid":{"GO:0015964":null}}


id: FYPO:0002976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:24006488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at MCB promoters during vegetative growth","termid":"FYPO:0005314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein localisation to chromatin at MCB promoters during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein localization to chromatin at MCB promoters during cellular response to HU","type":"exact"},{"name":"decreased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at MCB target genes during cellular response to hydroxyurea","type":"related"},{"name":"decreased protein localization to chromatin at MCB-containing promoters during cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein localization to chromatin at MCB promoters during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002976"}


id: PBO:0062851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTOA pseudogene 1","termid":"PBO:0062851"}


id: GO:0060353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion molecule production","termid":"GO:0060353"}


id: PBO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by MBF complex","termid":"PBO:0001302"}


id: PBO:0005749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAX inhibitor family protein Bxi1","termid":"PBO:0005749"}


id: GO:0009318
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes exonucleolytic cleavage in either 5' to 3' or 3' to 5' direction to yield nucleoside 5'-phosphates; it prefers single-stranded DNA.","definition_xrefs":["PMID:6284744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exodeoxyribonuclease VII complex","termid":"GO:0009318"}


id: PBO:0055877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 3C","termid":"PBO:0055877"}


id: PBO:0040713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 antisense RNA 1","termid":"PBO:0040713"}


id: PBO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication checkpoint protein Drc1","termid":"PBO:0001547"}


id: PBO:0079475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinkle mtDNA helicase","termid":"PBO:0079475"}


id: PBO:0091258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR family","termid":"PBO:0091258"}


id: PBO:0062808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 8","termid":"PBO:0062808"}


id: PBO:0060818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal EF-hand calcium binding protein 3","termid":"PBO:0060818"}


id: GO:0050926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis","termid":"GO:0050926"}


id: PR:Q9UUE6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03162","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.03c","secondary_identifiers":["UniProtKB:Q9UUE6"],"synonyms":[{"name":"LysRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-KARS","type":"exact"},{"name":"lysyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE6"}


id: GO:0001576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a glycosphingolipid with a core structure of GalNAc-beta-(1->3)-Gal-alpha-(1->4)-Glc(I).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"globoside metabolic process","termid":"GO:0001575"},{"relation_name":"is_a","term_name":"glycosphingolipid biosynthetic process","termid":"GO:0006688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"globoside biosynthetic process","synonyms":[{"name":"globoside anabolism","type":"exact"},{"name":"globoside biosynthesis","type":"exact"},{"name":"globoside formation","type":"exact"},{"name":"globoside synthesis","type":"exact"}],"termid":"GO:0001576"}


id: MONDO:0006846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe hypertension that is characterized by rapid onset of extremely high blood pressure and hypertension-mediated organ damage.","definition_xrefs":["PMID:38658108","NCIT:P378","PMID:30165516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertensive disorder","termid":"MONDO:0005044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hypertension","secondary_identifiers":["MESH:D006974","EFO:1001031","MedDRA:10025600","SCTID:70272006","UMLS:C0020540","DOID:10824","MEDGEN:9374"],"synonyms":[{"name":"MHT","type":"broad"},{"name":"accelerated-malignant hypertension","type":"exact"},{"name":"hypertensive emergency","type":"exact"},{"name":"malignant phase hypertension","type":"exact"}],"termid":"MONDO:0006846","xrefs":{"Monarch":{"xref_id":"0006846"}}}


id: PBO:0054674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2080","termid":"PBO:0054674"}


id: PBO:0082477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP (cyclase-associated protein); N-terminus binds adenylate cyclase and facilitates activation by RAS; N-terminus forms novel hexameric star-shaped shuriken structures that directly catalyze cofilin-mediated severing of actin filaments; C-terminus binds and recycles cofilin bound, ADP-actin monomers, facilitating regulation of actin dynamics and cell morphogenesis; N- and C-termini can function as physically separate proteins; mCAP1 is the mouse homolog","termid":"PBO:0082477"}


id: GO:0010737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with the activation of protein kinase A (PKA), and ends with the regulation of a downstream cellular process, e.g. transcription. The PKA catalytic subunit (PKA-C) is normally present in a complex with its regulatory subunit, PKA-R. The inhibitory action of PKA-R is released upon cAMP binding, which results in the activation of PKA-C.","definition_xrefs":["PMID:35252178","PMID:36431013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"protein kinase A signaling","secondary_identifiers":["Reactome:R-HSA-163358"],"synonyms":[{"name":"PKA signaling cascade","type":"related"},{"name":"protein kinase A signal transduction","type":"exact"},{"name":"protein kinase A signaling cascade","type":"related"},{"name":"protein kinase A signalling cascade","type":"related"}],"termid":"GO:0010737"}


id: PBO:0081383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 223","termid":"PBO:0081383"}


id: MONDO:0001181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal edema","termid":"MONDO:0006712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"secondary corneal edema","secondary_identifiers":["SCTID:27536004","MEDGEN:509795","ICD9:371.22","UMLS:C0155110","DOID:11032"],"termid":"MONDO:0001181","xrefs":{"Monarch":{"xref_id":"0001181"}}}


id: PBO:0046183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 2 pseudogene 4","termid":"PBO:0046183"}


id: MONDO:0016464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type B insulin-resistance syndrome belongs to the group of extreme insulin-resistance syndromes (which includes leprechaunism, the lipodystrophies, Rabson-Mendenhall syndrome, and type A insulin resistance syndrome) and occurs in the context of immune dysfunction.","definition_xrefs":["Orphanet:2298"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"insulin-resistance syndrome type B","secondary_identifiers":["icd11.foundation:408487090","MEDGEN:574967","UMLS:C0342337","GARD:3009"],"synonyms":[{"name":"insulin-resistance type B","type":"related"}],"termid":"MONDO:0016464","xrefs":{"Monarch":{"xref_id":"0016464"}}}


id: MONDO:0019571
data:
  {"annotated_genes":["SJAG_03457","SJAG_00660"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87832,87831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"}]},"cv_name":"mondo","definition":"Autosomal dominant cutis laxa (ADCL) is a connective tissue disorder characterized by wrinkled, redundant and sagging inelastic skin associated in some cases with internal organ involvement.","definition_xrefs":["Orphanet:90348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant cutis laxa","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:720393698","GARD:1639","MEDGEN:120630","DOID:0070142","UMLS:C0268350","SCTID:111388003","MESH:C562627"],"synonyms":[{"name":"ADCL","type":"exact"},{"name":"cutis laxa, autosomal dominant","type":"exact"}],"termid":"MONDO:0019571","terms_by_termid":{"MONDO:0014706":null},"xrefs":{"Monarch":{"xref_id":"0019571"}}}


id: FYPO:0004071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion during vegetative growth","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion during vegetative growth","type":"related"},{"name":"decreased RNA level during cellular response to copper during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion during mitotic cell cycle","type":"related"},{"name":"decreased transcript level during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion during vegetative growth","type":"exact"}],"termid":"FYPO:0004071"}


id: GO:1901275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tartrate.","definition_xrefs":["UniPathway:UPA00839","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tartrate metabolic process","synonyms":[{"name":"tartrate metabolism","type":"exact"}],"termid":"GO:1901275"}


id: GO:0021986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the habenula over time from its initial formation until its mature state. The habenula is the group of nuclei that makes up the stalk of the pineal gland.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021","ISBN:9780721601465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"epithalamus development","termid":"GO:0021538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"habenula development","termid":"GO:0021986"}


id: PBO:0030654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_methylamine","termid":"PBO:0030654"}


id: GO:1904553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemotaxis to arachidonic acid.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16382163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of chemotaxis to arachidonate","termid":"GO:1904552"},{"relation_name":"negatively_regulates","term_name":"chemotaxis to arachidonate","termid":"GO:0034670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemotaxis to arachidonate","synonyms":[{"name":"down regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"down-regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"downregulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"inhibition of chemotaxis to arachidonic acid","type":"narrow"},{"name":"negative regulation of chemotaxis to arachidonic acid","type":"exact"}],"termid":"GO:1904553"}


id: PBO:0000430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase Lys3","termid":"PBO:0000430"}


id: MONDO:0003603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hormone producing or non-producing pituitary gland adenoma or carcinoma, not associated with a hormonal syndrome.","definition_xrefs":["NCIT:C4009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"non-functioning endocrine neoplasm","termid":"MONDO:0021119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-functioning pituitary gland neoplasm","secondary_identifiers":["MEDGEN:756062","SCTID:448563005","UMLS:C3163649"],"synonyms":[{"name":"Nonfunctioning pituitary tumor","type":"exact"},{"name":"Nonfunctioning pituitary tumour","type":"exact"},{"name":"non-functioning endocrine neoplasm of pituitary gland","type":"exact"},{"name":"non-functioning neoplasm of pituitary","type":"exact"},{"name":"non-functioning neoplasm of pituitary gland","type":"exact"},{"name":"non-functioning neoplasm of the pituitary","type":"exact"},{"name":"non-functioning neoplasm of the pituitary gland","type":"exact"},{"name":"non-functioning pituitary gland neoplasm","type":"exact"},{"name":"non-functioning pituitary gland tumor","type":"exact"},{"name":"non-functioning pituitary gland tumour","type":"exact"},{"name":"non-functioning pituitary neoplasm","type":"exact"},{"name":"non-functioning pituitary tumor","type":"exact"},{"name":"non-functioning pituitary tumour","type":"exact"},{"name":"non-functioning tumor of pituitary","type":"exact"},{"name":"non-functioning tumor of pituitary gland","type":"exact"},{"name":"non-functioning tumor of the pituitary","type":"exact"},{"name":"non-functioning tumor of the pituitary gland","type":"exact"},{"name":"non-functioning tumour of pituitary","type":"exact"},{"name":"non-functioning tumour of pituitary gland","type":"exact"},{"name":"non-functioning tumour of the pituitary","type":"exact"},{"name":"non-functioning tumour of the pituitary gland","type":"exact"},{"name":"nonfunctional pituitary gland neoplasm","type":"exact"},{"name":"pituitary gland non-functioning endocrine neoplasm","type":"exact"}],"termid":"MONDO:0003603","xrefs":{"Monarch":{"xref_id":"0003603"}}}


id: GO:0140293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (ADP-D-ribosyl)-L-glutamyl-[protein] + H2O = L-glutamyl-[protein] + ADP-ribose.","definition_xrefs":["PMID:23481255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"ADP-ribosylglutamate hydrolase activity","termid":"GO:0140293"}


id: PBO:0034042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_hemiplasy_relationship_with","termid":"PBO:0034042"}


id: MONDO:1012485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia with craniofacial deformity and disproportionate dwarfism, non-human animal","termid":"MONDO:1011966"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia with craniofacial deformity and disproportionate dwarfism, sheep","secondary_identifiers":["OMIA:001903-9940"],"termid":"MONDO:1012485","xrefs":{"Monarch":{"xref_id":"1012485"}}}


id: MONDO:0007733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any holoprosencephaly in which the cause of the disease is a mutation in the SHH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 3","secondary_identifiers":["MEDGEN:327125","DOID:0110875","MESH:C564181","OMIM:142945","UMLS:C1840529"],"synonyms":[{"name":"HLP3","type":"exact"},{"name":"HPE3","type":"exact"},{"name":"Hlp3","type":"related"},{"name":"SHH holoprosencephaly","type":"exact"},{"name":"Shh holoprosencephaly","type":"exact"},{"name":"holoprosencephaly 3","type":"exact"},{"name":"holoprosencephaly caused by mutation in SHH","type":"exact"},{"name":"holoprosencephaly caused by mutation in Shh","type":"exact"},{"name":"holoprosencephaly type 3","type":"exact"}],"termid":"MONDO:0007733","xrefs":{"Monarch":{"xref_id":"0007733"}}}


id: PBO:0044624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin domain containing 2B","termid":"PBO:0044624"}


id: PR:Q8TFH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB17E12.12c gene.","definition_xrefs":["UniProtKB:Q8TFH2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier PB17E12.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.12c","synonyms":[{"name":"Spom972h-SPAPB17E12.12c","type":"exact"}],"termid":"PR:Q8TFH2"}


id: FYPO:0006927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the ratio of the nuclear volume to the total cell volume is lower than normal (the ration observed in wild type is approximately 0.076-0.089).","definition_xrefs":["PomBase:mah","PMID:31015410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased nucleus:cytoplasm ratio","synonyms":[{"name":"decreased nuclear:cytoplasmic ratio","type":"exact"},{"name":"decreased nuclear:cytoplasmic volume ratio","type":"exact"},{"name":"decreased nucleus:cell volume ratio","type":"exact"},{"name":"decreased nucleus:cytoplasm ratio during mitotic cell cycle","type":"related"},{"name":"decreased nucleus:cytoplasm ratio during vegetative growth","type":"exact"},{"name":"decreased nucleus:cytoplasm volume ratio","type":"exact"},{"name":"reduced nucleus:cytoplasm ratio","type":"exact"}],"termid":"FYPO:0006927"}


id: PR:P87130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim17-A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.16c","secondary_identifiers":["UniProtKB:P87130"],"synonyms":[{"name":"SPAC3A12.16c","type":"related"},{"name":"Spom972h-TIMM17A","type":"exact"},{"name":"mitochondrial protein import protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87130"}


id: GO:1990806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by activation of a ligand-gated ion channel on the surface of a cell. The pathway begins with binding of an extracellular ligand to a ligand-gated ion channel and ends with a molecular function that directly regulates a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bhm","PMID:25869137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ligand-gated ion channel signaling pathway","synonyms":[{"name":"ligand-gated ion channel signalling pathway","type":"exact"}],"termid":"GO:1990806"}


id: PBO:0081783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 710","termid":"PBO:0081783"}


id: PBO:0078618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 67","termid":"PBO:0078618"}


id: FYPO:0003359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to myriocin. Cells stop growing (and may die) at a concentration of myriocin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to myriocin during vegetative growth","synonyms":[{"name":"hypersensitive to myriocin during vegetative growth","type":"exact"},{"name":"sensitive to myriocin during mitotic cell cycle","type":"related"},{"name":"sensitivity to chemicals interfering with lipids during vegetative growth","type":"broad"}],"termid":"FYPO:0003359"}


id: MONDO:0017054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thiamine-responsive maple syrup urine disease (thiamine-responsive MSUD) is a less severe variant of MSUD that manifests with a phenotype similar to intermediate MSUD but that responds positively to treatment with thiamine.","definition_xrefs":["Orphanet:268184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maple syrup urine disease","termid":"MONDO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"thiamine-responsive maple syrup urine disease","secondary_identifiers":["UMLS:C0751285","MEDGEN:199627","NANDO:2201081","GARD:17266"],"synonyms":[{"name":"thiamine-responsive BCKD deficiency","type":"exact"},{"name":"thiamine-responsive MSUD","type":"exact"},{"name":"thiamine-responsive branched-chain 2-ketoacid dehydrogenase deficiency","type":"exact"},{"name":"thiamine-responsive branched-chain alpha-ketoacid dehydrogenase deficiency","type":"exact"},{"name":"thiamine-responsive maple syrup urine disease","type":"exact"}],"termid":"MONDO:0017054","xrefs":{"Monarch":{"xref_id":"0017054"}}}


id: PBO:0001989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannosyltransferase Ogm2","termid":"PBO:0001989"}


id: PBO:0048038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrous sheath interacting protein 1","termid":"PBO:0048038"}


id: PBO:0029959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ubiquinol-cytochrome-c_reductase_activity","termid":"PBO:0029959"}


id: PBO:0091282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase, human DHRS7 family","termid":"PBO:0091282"}


id: PBO:0011140
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CAN1","termid":"PBO:0011140"}


id: PBO:0080109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"utrophin","termid":"PBO:0080109"}


id: PBO:0042874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 126","termid":"PBO:0042874"}


id: MONDO:0004129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anal carcinoma arising from the transitional zone of the anal canal.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"anal squamous cell carcinoma","termid":"MONDO:0006082"},{"relation_name":"is_a","term_name":"anal canal carcinoma","termid":"MONDO:0007108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"cloacogenic carcinoma","secondary_identifiers":["DOID:7173","ICDO:8124/3","MEDGEN:90755","NCIT:C8255","MESH:C563020","UMLS:C0334273","icd11.foundation:1771267581"],"synonyms":[{"name":"anal canal cloacogenic cancer","type":"exact"},{"name":"anal canal cloacogenic carcinoma","type":"exact"},{"name":"anal cloacogenic carcinoma","type":"exact"},{"name":"cloacogenic anal carcinoma","type":"exact"},{"name":"cloacogenic carcinoma","type":"exact"},{"name":"cloacogenic carcinoma (morphologic abnormality)","type":"exact"},{"name":"cloacogenic carcinoma of anus","type":"exact"},{"name":"cloacogenic carcinoma of the anus","type":"exact"}],"termid":"MONDO:0004129","xrefs":{"Monarch":{"xref_id":"0004129"}}}


id: GO:0015308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + amiloride(in) = H+(in) + amiloride(out).","definition_xrefs":["TC:2.A.1.2.1"],"gene_count":0,"genotype_count":0,"name":"obsolete amiloride:proton antiporter activity (obsolete GO:0015308)","synonyms":[{"name":"amiloride:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015308"}


id: PBO:0052045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 1 pseudogene 1","termid":"PBO:0052045"}


id: PBO:0040529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-2-microglobulin regulator","termid":"PBO:0040529"}


id: GO:0032237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that initiates the activity of an inactive store-operated calcium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of store-operated calcium channel activity","termid":"GO:1901341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"activation of store-operated calcium channel activity","termid":"GO:0032237"}


id: GO:1990470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs).","definition_xrefs":["PMID:24906153","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"piRNA cluster binding","termid":"GO:1990470"}


id: GO:0032539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of any behavior associated with finding a host organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of host-seeking behavior","termid":"GO:0032538"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"negatively_regulates","term_name":"host-seeking behavior","termid":"GO:0032537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of host-seeking behavior","synonyms":[{"name":"down regulation of host-seeking behavior","type":"exact"},{"name":"down-regulation of host-seeking behavior","type":"exact"},{"name":"downregulation of host-seeking behavior","type":"exact"},{"name":"inhibition of host-seeking behavior","type":"narrow"},{"name":"negative regulation of host-seeking behaviour","type":"exact"}],"termid":"GO:0032539"}


id: PR:P0CT74
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S11-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.11","synonyms":[{"name":"Spom972h-rps1102","type":"exact"}],"termid":"PR:P0CT74"}


id: PBO:0067061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 83, pseudogene","termid":"PBO:0067061"}


id: GO:0060105
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid-containing layer of cuticle that lies between the cortical layer and the surface coat. An example of this component is found in Caenorhabditis elegans.","definition_xrefs":["GOC:dph","ISSN:15518507","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cuticular extracellular matrix","termid":"GO:0060102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"epicuticle of collagen and cuticulin-based cuticle extracellular matrix","synonyms":[{"name":"epicuticle of collagen and cuticulin-based exoskeleton extracellular matrix","type":"related"}],"termid":"GO:0060105"}


id: PBO:0077406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 140","termid":"PBO:0077406"}


id: MONDO:0003555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the Bartholin gland and is characterized by the presence of malignant glandular epithelial cells and malignant squamous epithelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bartholin gland squamous cell carcinoma","termid":"MONDO:0004053"},{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Bartholin gland adenosquamous carcinoma","secondary_identifiers":["MEDGEN:267339","DOID:5630","NCIT:C40296","UMLS:C1511050"],"synonyms":[{"name":"Bartholin gland adenosquamous carcinoma","type":"exact"},{"name":"Bartholin's gland adenosquamous carcinoma","type":"exact"},{"name":"major vestibular gland adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0003555","xrefs":{"Monarch":{"xref_id":"0003555"}}}


id: MONDO:0018799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare hypercholesterolemia.","gene_count":0,"genotype_count":0,"name":"obsolete rare hypercholesterolemia (obsolete MONDO:0018799)","secondary_identifiers":["Orphanet:477811"],"synonyms":[{"name":"rare hypercholesterolemia","type":"exact"}],"termid":"MONDO:0018799","xrefs":{"Monarch":{"xref_id":"0018799"}}}


id: GO:0017149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein biosynthetic process inhibitor activity (obsolete GO:0017149)","synonyms":[{"name":"protein anabolism inhibitor activity","type":"exact"},{"name":"protein biosynthetic process inhibitor activity","type":"exact"},{"name":"protein formation inhibitor activity","type":"exact"},{"name":"protein synthesis inhibitor activity","type":"exact"}],"termid":"GO:0017149"}


id: MONDO:1010790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any painful thickening of the footpads with severe keratinous proliferations and fissures that occurs in dogs due to a mutation in the KRT16 gene.","definition_xrefs":["PMID:25521457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal nonepidermolytic palmoplantar keratoderma, KRT16-related, dog","secondary_identifiers":["OMIA:002088-9615"],"synonyms":[{"name":"palmoplantar keratoderma, nonepidermolytic, focal 1, dog","type":"related"}],"termid":"MONDO:1010790","xrefs":{"Monarch":{"xref_id":"1010790"}}}


id: FYPO:0005685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to cadmium ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to cadmium ion","synonyms":[{"name":"decreased RNA accumulation during cellular response to cadmium ion","type":"related"},{"name":"decreased RNA level during cellular response to cadmium","type":"exact"},{"name":"decreased RNA level during cellular response to cadmium ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to cadmium ion during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to cadmium ion","type":"exact"},{"name":"reduced RNA level during cellular response to cadmium ion","type":"exact"}],"termid":"FYPO:0005685"}


id: PBO:0053758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1000","termid":"PBO:0053758"}


id: PBO:0064018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 52","termid":"PBO:0064018"}


id: PBO:0070531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 30","termid":"PBO:0070531"}


id: GO:0110071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The base of the cellularization invagination or cleavage furrow most distal to the original multi-nucleate cell or syncytium plasma membrane.","definition_xrefs":["GOC:ha","PMID:27226317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cellularization cleavage furrow","termid":"GO:0110070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cellularization cleavage furrow invagination front","termid":"GO:0110071"}


id: MONDO:0010641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare renal disease characterized by the association of X-linked Alport syndrome (glomerular nephropathy, sensorineural deafness and ocular anomalies) and benign proliferation of visceral smooth muscle cells along the gastrointestinal, respiratory, and female genital tracts and clinically manifests with dysphagia, dyspnea, cough, stridor, postprandial vomiting, retrosternal or epigastric pain, recurrent pneumonia, and clitoral hypertrophy in females.","definition_xrefs":["Orphanet:1018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome X","termid":"MONDO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"X-linked diffuse leiomyomatosis-Alport syndrome","secondary_identifiers":["UMLS:C1839884","OMIM:308940","MESH:C537113","GARD:2432","MEDGEN:333429"],"synonyms":[{"name":"ATS-DL","type":"related"},{"name":"Alport syndrome and diffuse leiomyomatosis","type":"related"},{"name":"Alport syndrome with diffuse leiomyomatosis","type":"related"},{"name":"DL-ATS","type":"related"},{"name":"Xq22.3 microdeletion syndrome","type":"exact"},{"name":"chromosome Xq22.3 centromeric deletion syndrome","type":"related"},{"name":"diffuse leiomyomatosis in Alport syndrome","type":"related"},{"name":"leiomyomatosis, diffuse, with Alport syndrome","type":"related"},{"name":"leiomyomatosis, esophageal and vulval, with nephropathy","type":"related"}],"termid":"MONDO:0010641","xrefs":{"Monarch":{"xref_id":"0010641"}}}


id: PBO:0063667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins GalNAc transferase 4","termid":"PBO:0063667"}


id: PBO:0028858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mRNA_splicing,_via_spliceosome","termid":"PBO:0028858"}


id: GO:0008542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism in which a change in behavior of an individual occurs in response to repeated exposure to a visual cue.","definition_xrefs":["ISBN:0582227089","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual behavior","termid":"GO:0007632"},{"relation_name":"is_a","term_name":"associative learning","termid":"GO:0008306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visual learning","synonyms":[{"name":"spatial learning","type":"related"}],"termid":"GO:0008542"}


id: PATO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000852 relative auditory threshold (obsolete PATO:0000852)","termid":"PATO:0000852"}


id: PBO:0073169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEH1 like nucleoporin","termid":"PBO:0073169"}


id: PBO:0004603
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP-Like Protein","termid":"PBO:0004603"}


id: MONDO:0011398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dystrophic epidermolysis bullosa pruriginosa is a rare subtype of dystrophic epidermolysis bullosa (DEB) characterized by generalized or localized skin lesions associated with severe, if not intractable, pruritus.","definition_xrefs":["Orphanet:89843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dystrophic epidermolysis bullosa pruriginosa","secondary_identifiers":["OMIM:604129","SCTID:403810008","GARD:16779","ICD9:757.39","MEDGEN:266151","MESH:C563192","UMLS:C1275114"],"synonyms":[{"name":"DEB, pruriginosa","type":"exact"},{"name":"DEB-Pr","type":"exact"},{"name":"Deb, pruriginosa","type":"related"},{"name":"dystrophic epidermolysis bullosa pruriginosa","type":"exact"},{"name":"epidermolysis bullosa pruriginosa","type":"related"},{"name":"pruriginous dystrophic epidermolysis bullosa","type":"exact"}],"termid":"MONDO:0011398","xrefs":{"Monarch":{"xref_id":"0011398"}}}


id: PR:Q06182
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q06182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type switching protein swi10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.15c","synonyms":[{"name":"Spom972h-swi10","type":"exact"}],"termid":"PR:Q06182"}


id: GO:0045262
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The catalytic sector of the plasma membrane hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the plasma membrane when the entire ATP synthase is assembled. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) (obsolete GO:0045262)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, catalytic core F(1)","type":"broad"}],"termid":"GO:0045262"}


id: PBO:0085176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-methyltransferase; catalyzes two different O-methylation steps in ubiquinone (Coenzyme Q) biosynthesis; component of a mitochondrial ubiquinone-synthesizing complex; phosphoprotein","termid":"PBO:0085176"}


id: GO:0019270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aerobactin (C22H36N4O13), a hydroxamate iron transport compound. It is a conjugate of 6-(N-acetyl-N-hydroxylamine)-2-aminohexanoic acid and citric acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"aerobactin metabolic process","termid":"GO:0046442"},{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aerobactin biosynthetic process","secondary_identifiers":["MetaCyc:AEROBACTINSYN-PWY"],"synonyms":[{"name":"aerobactin anabolism","type":"exact"},{"name":"aerobactin biosynthesis","type":"exact"},{"name":"aerobactin formation","type":"exact"},{"name":"aerobactin synthesis","type":"exact"}],"termid":"GO:0019270"}


id: GO:0035278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference pathway in which microRNAs (miRNAs) block the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA will typically mediate repression of translation if the miRNA imperfectly base-pairs with the 3' untranslated regions of target mRNAs.","definition_xrefs":["PMID:15196554","PMID:14744438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"miRNA-mediated gene silencing by inhibition of translation","synonyms":[{"name":"down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"miRNA mediated inhibition of translation","type":"exact"},{"name":"miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:0035278"}


id: MONDO:0010971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infundibulopelvic stenosis-multicystic kidney syndrome is a rare, genetic renal malformation syndrome characterized by variable degrees of malformation in the pelvicalyceal system (including unilateral or bilateral calyceal dilatation, infundibular stenosis, hypoplasia or stenosis of the renal pelvis) which lead to multicystic kidney. Clinically it exhibits abdominal, lumbar or flank pain, recurrent urinary tract infections, hypertension, proteinuria and often progresses to renal insufficiency. Calyceal dilatation and hydronephrosis are frequently seen on imaging.","definition_xrefs":["Orphanet:1849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infundibulopelvic stenosis-multicystic kidney syndrome","secondary_identifiers":["MESH:C535528","SCTID:725905005","UMLS:C1832949","OMIM:600989","MEDGEN:318751"],"synonyms":[{"name":"infundibulopelvic dysgenesis","type":"related"}],"termid":"MONDO:0010971","xrefs":{"Monarch":{"xref_id":"0010971"}}}


id: FYPO:0007488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is decreased, and the protein is present in the vacuole instead.","definition_xrefs":["PMID:32918581","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to Golgi apparatus","termid":"FYPO:0004786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to vacuole","synonyms":[{"name":"decreased protein localisation to Golgi apparatus, with protein mislocalised to vacuole","type":"exact"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to vacuole during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to vacuole during vegetative growth","type":"exact"},{"name":"reduced protein localization to Golgi apparatus, with protein mislocalized to vacuole","type":"exact"}],"termid":"FYPO:0007488"}


id: MONDO:1012721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any centronuclear myopathy that occurs in dogs due to a mutation in the BIN1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, dog","termid":"MONDO:1010918"},{"relation_name":"is_a","term_name":"centronuclear myopathy, non-human animal","termid":"MONDO:1012963"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centronuclear myopathy 2, BIN1-related, dog","secondary_identifiers":["OMIA:001660-9615"],"synonyms":[{"name":"inherited myopathy of Great Danes","type":"narrow"}],"termid":"MONDO:1012721","xrefs":{"Monarch":{"xref_id":"1012721"}}}


id: PBO:0045474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally regulated GTP binding protein 2","termid":"PBO:0045474"}


id: PBO:0036494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate lyase superfamily, bacterial 3-carboxy-cis,cis-muconate cycloisomerase related","termid":"PBO:0036494"}


id: PBO:0089354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine phosphatase superfamily protein","termid":"PBO:0089354"}


id: PBO:0060729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit AB1 pseudogene 1","termid":"PBO:0060729"}


id: PR:Q10491
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec74 gene.","definition_xrefs":["UniProtKB:Q10491","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf guanine nucleotide exchange factor sec74 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.01","synonyms":[{"name":"Spom972h-sec74","type":"exact"}],"termid":"PR:Q10491"}


id: PBO:0046182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 2 pseudogene 3","termid":"PBO:0046182"}


id: GO:0062090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of taurine biosynthesis.","definition_xrefs":["GOC:BHF","PMID:24911144","PMID:18648510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of taurine biosynthetic process","termid":"GO:0062089"},{"relation_name":"positively_regulates","term_name":"taurine biosynthetic process","termid":"GO:0042412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"positive regulation of taurine biosynthetic process","termid":"GO:0062090"}


id: GO:0051521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops the active process of bipolar cell growth, polarized growth from one end of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monopolar cell growth","termid":"GO:0051514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"termination of monopolar cell growth","termid":"GO:0051521"}


id: PBO:0046639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 20","termid":"PBO:0046639"}


id: MONDO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hantavirus hemorrhagic fever with renal syndrome","termid":"MONDO:0005784"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Hantavirus hemorrhagic fever with renal syndrome, Puumala virus type","secondary_identifiers":["UMLS:C0242993","DOID:0050201","MEDGEN:69308"],"synonyms":[{"name":"nephropathia epidemica","type":"related"},{"name":"nephropathis epidemica","type":"exact"}],"termid":"MONDO:0000284","xrefs":{"Monarch":{"xref_id":"0000284"}}}


id: MONDO:0009952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radioulnar synostosis-developmental delay-hypotonia syndrome, also known as Der Kaloustian-McIntosh-Silver syndrome, is an extremely rare syndrome with synostosis described in about 4 patients to date with clinical manifestations including congenital unilateral radioulnar synostosis, generalized hypotonia, developmental delay, and dysmorphic facial features (long face, prominent nose and ears).","definition_xrefs":["Orphanet:3270"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"developmental disability","termid":"MONDO:0005287"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"congenital radioulnar synostosis","termid":"MONDO:0017985"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0002320"],"is_obsolete":false,"name":"radioulnar synostosis-developmental delay-hypotonia syndrome","secondary_identifiers":["OMIM:266255","UMLS:C1849470","SCTID:721883006","GARD:1810","MEDGEN:341460","MESH:C538217","MESH:C564856"],"synonyms":[{"name":"Der Kaloustian-McIntosh-Silver syndrome","type":"exact"},{"name":"der Kaloustian mcintosh silver syndrome","type":"related"},{"name":"radioulnar synostosis with developmental delay and hypotonia syndrome","type":"exact"},{"name":"radioulnar synostosis, unilateral, with developintellectual disability and hypotonia","type":"related"},{"name":"radioulnar synostosis, unilateral, with developmental retardation and hypotonia","type":"related"},{"name":"unilateral radio-ulnar synostosis, generalised hypotonia, developintellectual disability, and a characteristic facial appearance","type":"related"},{"name":"unilateral radio-ulnar synostosis, generalised hypotonia, developmental retardation, and a characteristic facial appearance","type":"related"},{"name":"unilateral radio-ulnar synostosis, generalized hypotonia, developintellectual disability, and a characteristic facial appearance","type":"related"},{"name":"unilateral radio-ulnar synostosis, generalized hypotonia, developmental retardation, and a characteristic facial appearance","type":"related"}],"termid":"MONDO:0009952","xrefs":{"Monarch":{"xref_id":"0009952"}}}


id: MOD:01937
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-palmitoyl-L-methionine.","definition_xrefs":["PubMed:20942504","RESID:AA0591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"alpha-amino palmitoylated residue","termid":"MOD:01685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-palmitoyl-L-methionine","synonyms":[{"name":"(2S)-2-(hexadecanoylamino)-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-(hexadecanamido)-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"LIPID N-palmitoyl methionine","type":"exact"},{"name":"N-(1-oxohexadecyl)methionine","type":"exact"},{"name":"N-palmitoyl-L-methionine","type":"exact"}],"termid":"MOD:01937"}


id: PATO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased occurrence","synonyms":[{"name":"decreased incidence","type":"exact"}],"termid":"PATO:0002052"}


id: PBO:0057297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513a-2","termid":"PBO:0057297"}


id: PBO:0067084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 120, pseudogene","termid":"PBO:0067084"}


id: GO:1903166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polycyclic arene stimulus.","definition_xrefs":["PMID:10998501","GOC:TermGenie","GO_REF:0000071","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to polycyclic arene","termid":"GO:1903165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to polycyclic arene","termid":"GO:1903166"}


id: FYPO:0004830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle elongation ends earlier than normal during anaphase B. Elongation stops before the spindle reaches its normal maximum length.","definition_xrefs":["PMID:16824200","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000054","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000337"],"is_obsolete":false,"name":"arrested mitotic spindle elongation during anaphase B","synonyms":[{"name":"arrested mitotic spindle elongation during anaphase B during vegetative growth","type":"exact"},{"name":"arrested mitotic spindle extension during anaphase B","type":"exact"},{"name":"arrested spindle elongation during anaphase B during mitotic cell cycle","type":"exact"},{"name":"mitotic spindle elongation arrested during anaphase B","type":"exact"}],"termid":"FYPO:0004830"}


id: SO:0001367
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carbamoylmethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carbamoylmethyluridine","secondary_identifiers":["RNAMOD:075"],"synonyms":[{"name":"5-carbamoylmethyluridine","type":"exact"},{"name":"five carbamoylmethyluridine","type":"exact"},{"name":"ncm5U","type":"exact"}],"termid":"SO:0001367"}


id: PBO:0061732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 5","termid":"PBO:0061732"}


id: PBO:0068963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 207, pseudogene","termid":"PBO:0068963"}


id: GO:0030019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Xaa, Lys-Xaa, but with more restricted specificity than trypsin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptase activity (obsolete GO:0030019)","synonyms":[{"name":"lung tryptase activity","type":"narrow"},{"name":"mast cell neutral proteinase activity","type":"related"},{"name":"mast cell protease II activity","type":"narrow"},{"name":"mast cell proteinase II","type":"related"},{"name":"mast cell serine proteinase II","type":"related"},{"name":"mast cell serine proteinase tryptase activity","type":"related"},{"name":"mast cell tryptase activity","type":"narrow"},{"name":"pituitary tryptase activity","type":"narrow"},{"name":"rat mast cell protease II","type":"related"},{"name":"skin tryptase activity","type":"narrow"},{"name":"tryptase M","type":"related"},{"name":"tryptase activity","type":"exact"}],"termid":"GO:0030019"}


id: GO:0046797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The refolding and structural rearrangements of individual capsid subunits to transition from the intermediate procapsid, to the more stable capsid structure.","definition_xrefs":["PMID:19204733","GOC:bf","PMID:10627558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"viral capsid assembly","termid":"GO:0019069"},{"relation_name":"part_of","term_name":"virus maturation","termid":"GO:0019075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"viral procapsid maturation","secondary_identifiers":["UniProtKB-KW:KW-1273"],"synonyms":[{"name":"capsid maturation","type":"exact"},{"name":"viral capsid maturation","type":"exact"},{"name":"virion maturation","type":"broad"}],"termid":"GO:0046797"}


id: GO:0019842
data:
  {"annotated_genes":["SJAG_00582","SJAG_03985","SJAG_00097","SJAG_03914","SJAG_04149","SJAG_02791","SJAG_03362","SJAG_04031","SJAG_03961","SJAG_00432","SJAG_05230","SJAG_00186","SJAG_03055","SJAG_02305","SJAG_00673","SJAG_00869","SJAG_04145","SJAG_03306","SJAG_04842","SJAG_00830","SJAG_01019","SJAG_03434","SJAG_04178","SJAG_04678","SJAG_03861","SJAG_03743","SJAG_02205","SJAG_00706","SJAG_00495","SJAG_02464","SJAG_02972","SJAG_01766","SJAG_00714","SJAG_03312","SJAG_03671","SJAG_03102","SJAG_04988","SJAG_00937","SJAG_02734"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65967,59553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031177"},{"annotations":[75111,80202,65654,58413,69458,67736,70213,74234,112414,67466,66330,69410,57220,66747,68917,81397,67695,62339,60600,70419,72286,76200,66802,71643,73850,64414,81110,66562,58062,75954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030170"},{"annotations":[68505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030975"},{"annotations":[58837,62444,57592,59284,75014,65528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030976"}]},"cv_name":"molecular_function","definition":"Binding to a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00186":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00582":null,"SJAG_00673":null,"SJAG_00706":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00869":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02305":null,"SJAG_02464":null,"SJAG_02734":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03102":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03362":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_03743":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_03961":null,"SJAG_03985":null,"SJAG_04031":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04178":null,"SJAG_04678":null,"SJAG_04842":null,"SJAG_04988":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"vitamin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019842","terms_by_termid":{"GO:0030170":null,"GO:0030975":null,"GO:0030976":null,"GO:0031177":null}}


id: GO:0042044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances that are in liquid form in normal living conditions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"fluid transport","termid":"GO:0042044"}


id: GO:0072155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to nephron tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"},{"relation_name":"is_a","term_name":"cell migration involved in kidney development","termid":"GO:0035787"},{"relation_name":"part_of","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in nephron tubule morphogenesis","termid":"GO:0072155"}


id: PR:O42944
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh2 gene.","definition_xrefs":["UniProtKB:O42944","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.09c","synonyms":[{"name":"Spom972h-omh2","type":"exact"}],"termid":"PR:O42944"}


id: PBO:0085743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in vacuole morphogenesis; acts at an early step of homotypic vacuole fusion that is required for vacuole tethering","termid":"PBO:0085743"}


id: GO:0045230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"capsule organization","synonyms":[{"name":"capsule organisation","type":"exact"},{"name":"capsule organization and biogenesis","type":"related"}],"termid":"GO:0045230"}


id: GO:0080043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to the 3-hydroxy group of a quercetin molecule.","definition_xrefs":["PMID:15352060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"quercetin 3-O-glucosyltransferase activity","termid":"GO:0080043"}


id: GO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external part of the host cell wall and/or host plasma membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell surface","termid":"GO:0044228"}


id: PBO:0077721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenascin R","termid":"PBO:0077721"}


id: MONDO:1012468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pentalogy of Fallot, non-human animal","termid":"MONDO:1011650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentalogy of Fallot, Amur tiger","secondary_identifiers":["OMIA:001857-74533"],"termid":"MONDO:1012468","xrefs":{"Monarch":{"xref_id":"1012468"}}}


id: PBO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm3","termid":"PBO:0000848"}


id: PBO:0058485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5680","termid":"PBO:0058485"}


id: PBO:0084694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA polymerase gamma; single subunit of mitochondrial DNA polymerase in yeast, in contrast to metazoan complex of catalytic and accessory subunits; polymorphic in yeast, petites occur more frequently in some lab strains; human ortholog POLG complements yeast mip1 mutant; mutations in human POLG associated with Alpers-Huttenlocher syndrome (AHS), progressive external ophthalmoplegia (PEO), parkinsonism, other mitochondrial diseases","termid":"PBO:0084694"}


id: PBO:0052383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 24","termid":"PBO:0052383"}


id: GO:1900622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Calcium-mediated signaling that results in positive regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:9407036","GOC:dgf","GOC:bf","PMID:9407035"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling (obsolete GO:1900622)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"calcineurin-dependent transcription activation","type":"narrow"},{"name":"calcineurin-dependent transcriptional induction","type":"narrow"},{"name":"calcineurin-mediated activation of transcription","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter by calcium-mediated signaling","type":"related"},{"name":"positive regulation of transcription from Pol II promoter by calcium-mediated signaling","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global by calcium-mediated signaling","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"}],"termid":"GO:1900622"}


id: PATO:0000027
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000027 electrolyte composition (obsolete PATO:0000027)","termid":"PATO:0000027"}


id: GO:0016841
data:
  {"annotated_genes":["SJAG_04827","SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008721"},{"annotations":[79276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004794"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of ammonia by the cleavage of a carbon-nitrogen bond or the reverse reaction with ammonia as a substrate.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00830":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ammonia-lyase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:4.3.1.-"],"termid":"GO:0016841","terms_by_termid":{"GO:0004794":null,"GO:0008721":null}}


id: MONDO:0700249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolytic ichthyosis","termid":"MONDO:0007239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolytic hyperkeratosis 1","secondary_identifiers":["OMIM:113800","DOID:0081358","UMLS:C5781874","MEDGEN:1826137"],"termid":"MONDO:0700249","xrefs":{"Monarch":{"xref_id":"0700249"}}}


id: GO:0036010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an endosome.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to endosome","synonyms":[{"name":"protein localisation in endosome","type":"exact"},{"name":"protein localization in endosome","type":"exact"}],"termid":"GO:0036010"}


id: PBO:0042100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 171","termid":"PBO:0042100"}


id: MONDO:0024404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete meningitis caused by anaerobic bacteria (obsolete MONDO:0024404)","termid":"MONDO:0024404","xrefs":{"Monarch":{"xref_id":"0024404"}}}


id: GO:0039690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication process where the template genome is positive stranded, single stranded RNA ((+)ssRNA). Replication of the positive strand leads to dsRNA formation, which in turn is transcribed into positive single stranded RNA.","definition_xrefs":["GOC:bf","GOC:jl","VZ:1116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive stranded viral RNA replication","synonyms":[{"name":"ss(+) viral RNA replication","type":"related"}],"termid":"GO:0039690"}


id: PBO:0034091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_positively_regulating","termid":"PBO:0034091"}


id: PBO:0051843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRS4 antisense RNA 1","termid":"PBO:0051843"}


id: MONDO:0003688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized or multifocal mesothelioma arising from the peritoneum and less often the pleura. Cases arising from the peritoneum predominantly occur in women. It is characterized by the formation of papillae, covered by a single layer of blunt mesothelial cells. Mitotic figures are not present. There is no evidence of severe cytologic atypia. It has a relatively favorable clinical outcome, compared to malignant mesothelioma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesothelioma","termid":"MONDO:0005065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"well differentiated papillary mesothelioma","secondary_identifiers":["MEDGEN:234487","ICDO:9052/1","UMLS:C1337012","DOID:5884","NCIT:C7635"],"synonyms":[{"name":"WDPM","type":"exact"},{"name":"benign intermediate mesothelioma","type":"related"},{"name":"benign/Intermediate mesothelioma","type":"exact"},{"name":"well differentiated papillary mesothelioma","type":"exact"},{"name":"well-differentiated mesothelial papillary neoplasm","type":"exact"},{"name":"well-differentiated mesothelial papillary tumor","type":"exact"},{"name":"well-differentiated mesothelial papillary tumour","type":"exact"},{"name":"well-differentiated papillary neoplasm of mesothelium","type":"exact"},{"name":"well-differentiated papillary neoplasm of the mesothelium","type":"exact"},{"name":"well-differentiated papillary tumor of mesothelium","type":"exact"},{"name":"well-differentiated papillary tumor of the mesothelium","type":"exact"},{"name":"well-differentiated papillary tumour of mesothelium","type":"exact"},{"name":"well-differentiated papillary tumour of the mesothelium","type":"exact"}],"termid":"MONDO:0003688","xrefs":{"Monarch":{"xref_id":"0003688"}}}


id: GO:0006996
data:
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id: PBO:0067183
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id: PBO:0055352
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id: GO:1900032
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id: MONDO:0013311
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id: GO:0048321
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id: GO:0042791
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id: FYPO:0006535
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id: PBO:0031393
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id: PBO:0043156
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id: MONDO:0003782
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id: GO:1902663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-L-cysteine S-palmitoylation.","definition_xrefs":["GOC:TermGenie","PMID:23444136","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-L-cysteine S-palmitoylation","termid":"GO:1902662"},{"relation_name":"is_a","term_name":"negative regulation of protein lipidation","termid":"GO:1903060"},{"relation_name":"negatively_regulates","term_name":"peptidyl-L-cysteine S-palmitoylation","termid":"GO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"down regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"down-regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"downregulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"inhibition of peptidyl-L-cysteine S-palmitoylation","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-cysteine S-palmitoylation","type":"narrow"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:1902663"}


id: PBO:0090221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/snRNA/rRNA pseudouridine synthase Pus7","termid":"PBO:0090221"}


id: MONDO:0007431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dens in dente and palatal invaginations","secondary_identifiers":["MEDGEN:377628","OMIM:125300","MESH:C538211","UMLS:C1852250"],"synonyms":[{"name":"dens in dente and palatal INVAGINATIONS","type":"related"}],"termid":"MONDO:0007431","xrefs":{"Monarch":{"xref_id":"0007431"}}}


id: PBO:0054654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2059","termid":"PBO:0054654"}


id: PBO:0065346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin like 2B","termid":"PBO:0065346"}


id: PBO:0091002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome-associated signalling scaffold, receptor of activated C kinase (RACK1) ortholog Cpc2","termid":"PBO:0091002"}


id: PATO:0001646
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering into a bearer by virtue of the bearer's extending out above or beyond its surface or boundary and outwards in relation to the physical space occupied by another entity.","definition_xrefs":["PATOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protruding out of","synonyms":[{"name":"exits through","type":"related"},{"name":"exposed","type":"related"},{"name":"extruding from","type":"exact"}],"termid":"PATO:0001646"}


id: MONDO:0008237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phocomelia-ectrodactyly-deafness-sinus arrhythmia syndrome is characterized by phocomelia (involving arms more severely), ectrodactyly, ear anomalies (bilateral anomalies of the pinnae), conductive deafness, dysmorphism (long and prominent philtrum, mild maxillary hypoplasia) and sinus arrhythmia. It has been described in four patients (a father and his son and a mother and her daughter) from two unrelated families.","definition_xrefs":["Orphanet:2878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"phocomelia-ectrodactyly-deafness-sinus arrhythmia syndrome","secondary_identifiers":["MEDGEN:356961","OMIM:171480","GARD:4323","UMLS:C1868390","MESH:C537498"],"synonyms":[{"name":"Stoll-LC)vy-Francfort syndrome","type":"exact"},{"name":"Stoll-Lévy-Francfort syndrome","type":"exact"},{"name":"Stoll-levy-Francfort syndrome","type":"related"},{"name":"facioauriculoradial dysplasia","type":"related"},{"name":"phocomelia ectrodactyly deafness sinus arrhythmia","type":"related"},{"name":"phocomelia-ectrodactyly, EAR malformation, deafness, and sinus arrhythmia","type":"related"}],"termid":"MONDO:0008237","xrefs":{"Monarch":{"xref_id":"0008237"}}}


id: SO:0000964
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded, linear RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"double_stranded_RNA_chromosome","termid":"SO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_double_stranded_RNA_chromosome","synonyms":[{"name":"linear double stranded RNA chromosome","type":"exact"}],"termid":"SO:0000964"}


id: GO:0032665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-21 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-21 production","termid":"GO:0032625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-21 production","secondary_identifiers":["GO:0045390"],"synonyms":[{"name":"regulation of IL-21 production","type":"exact"},{"name":"regulation of interleukin-21 biosynthetic process","type":"narrow"}],"termid":"GO:0032665"}


id: GO:0141066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host extracellular matrix.","definition_xrefs":["PMID:2404867","PMID:25865874","PMID:11982763","PMID:21115719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host extracellular matrix","synonyms":[{"name":"disruption of host extracellular matrix","type":"broad"}],"termid":"GO:0141066"}


id: PR:Q9UT59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC513.07 gene.","definition_xrefs":["UniProtKB:Q9UT59","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C513.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.07","synonyms":[{"name":"Spom972h-SPAC513.07","type":"exact"}],"termid":"PR:Q9UT59"}


id: MONDO:0026419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete isolated corpus callosum agenesis (obsolete MONDO:0026419)","secondary_identifiers":["ICD10CM:Q04.0"],"termid":"MONDO:0026419","xrefs":{"Monarch":{"xref_id":"0026419"}}}


id: MONDO:0015540
data:
  {"annotated_genes":["SJAG_02453","SJAG_02572","SJAG_01697","SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[87511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[88457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[87815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"}]},"cv_name":"mondo","definition":"Hemophagocytic syndrome (HPS) is a rare immune disease and a potentially life-threatening disorder characterized by cytokine storm and overwhelming inflammation causing fever, hepatosplenomegaly, cytopenia, hypertriglyceridemia, hyperferritinemia, and hemophagocytosis in bone marrow, liver, spleen or lymph nodes. It can be either primary due to a genetic defect (primary hemophagocytic lymphohistiocytosis), or secondary to malignancies, to infections, most commonly with viruses such as Epstein-Barr virus or cytomegalovirus, human immunodeficiency virus, or to autoimmune disorders such as systemic lupus erythematosus or adult-onset Still disease (secondary hemophagocytic lymphohistiocytosis).","definition_xrefs":["Orphanet:158032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01697":null,"SJAG_02453":null,"SJAG_02572":null,"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hemophagocytic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:288.8","SCTID:234437005","DOID:0050120","NCIT:C35439","UMLS:C3887558","MedDRA:10058125","MEDGEN:854411","NORD:1938","NANDO:2200032","GARD:20024","NCIT:C34792"],"synonyms":[{"name":"FHL","type":"related"},{"name":"HLH","type":"exact"},{"name":"Hemophagocytic Lymphohistiocytosis","type":"exact"},{"name":"familial erythrophagocytic lymphohistiocytosis","type":"related"},{"name":"familial hemophagocytic lymphohistiocytosis","type":"related"},{"name":"familial histiocytic reticulosis","type":"related"},{"name":"haemophagocytic syndrome","type":"related"},{"name":"hemophagocytic disorder","type":"related"},{"name":"hemophagocytic lymphohistiocytosis","type":"exact"},{"name":"hemophagocytic syndrome","type":"exact"}],"termid":"MONDO:0015540","terms_by_termid":{"MONDO:0011336":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0013135":null},"xrefs":{"Monarch":{"xref_id":"0015540"}}}


id: GO:0090641
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The middle layer in a microsporidian spore wall that lies under the exospore and outside the plasma membrane, containing chitin and proteins.","definition_xrefs":["PMID:19457051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"microsporidian-type endospore","termid":"GO:0090641"}


id: PBO:0067512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 653, pseudogene","termid":"PBO:0067512"}


id: MOD:02006
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with a stearoylsulfanyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"stearoylated residue","termid":"MOD:02001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"S-stearoylated residue","termid":"MOD:02006"}


id: PR:O13453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase pmp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.01","synonyms":[{"name":"Spom972h-pmp1","type":"exact"}],"termid":"PR:O13453"}


id: GO:0047570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxoadipate enol-lactone + H2O = 3-oxoadipate.","definition_xrefs":["EC:3.1.1.24","MetaCyc:3-OXOADIPATE-ENOL-LACTONASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-oxoadipate enol-lactonase activity","secondary_identifiers":["RHEA:10184"],"synonyms":[{"name":"3-ketoadipate enol-lactonase activity","type":"related"},{"name":"3-oxoadipic enol-lactone hydrolase activity","type":"related"},{"name":"4-carboxymethylbut-3-en-4-olide enol-lactonohydrolase activity","type":"related"},{"name":"beta-ketoadipate enol-lactone hydrolase activity","type":"related"},{"name":"beta-ketoadipic enol-lactone hydrolase activity","type":"related"},{"name":"carboxymethylbutenolide lactonase activity","type":"related"}],"termid":"GO:0047570"}


id: MONDO:0019245
data:
  {"annotated_genes":["SJAG_00158","SJAG_04790","SJAG_02518","SJAG_04323","SJAG_01407","SJAG_00570","SJAG_02056","SJAG_02949","SJAG_03052","SJAG_02068","SJAG_02716"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88268,88267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"},{"annotations":[87171,87170,87169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019149"},{"annotations":[86846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010155"},{"annotations":[88437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010526"},{"annotations":[87668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009744"},{"annotations":[87678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"},{"annotations":[88752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[88036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[88029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[87427,87426,87428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019148"}]},"cv_name":"mondo","definition":"An inherited metabolic disorder in which harmful amounts of lipids accumulate in cells and tissues. Because of a functionally impaired hydrolase or auxiliary protein, their lipid substrates cannot be degraded, accumulate in the lysosome, and slowly spread to other intracellular membranes.","definition_xrefs":["Wikipedia:Lipid_storage_disorder","PMID:21502308"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00570":null,"SJAG_01407":null,"SJAG_02056":null,"SJAG_02068":null,"SJAG_02518":null,"SJAG_02716":null,"SJAG_02949":null,"SJAG_03052":null,"SJAG_04323":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"lysosomal lipid storage disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:9780","GARD:12511","SCTID:10741005","UMLS:C0023794","MESH:D008064","ICD9:272.8","Orphanet:79204","DOID:9455","ICD9:272.7"],"synonyms":[{"name":"inborn error of lipid storage","type":"exact"},{"name":"inborn lipid storage disorder","type":"exact"},{"name":"lipid storage disease","type":"exact"},{"name":"lipidoses","type":"related"},{"name":"lipidosis","type":"related"},{"name":"lipoid storage diseas","type":"exact"},{"name":"lipoid storage disease","type":"exact"},{"name":"lipoid storage disorder","type":"exact"},{"name":"lipoidoses","type":"related"},{"name":"lipoidosis","type":"related"},{"name":"rare inborn error of lipid storage","type":"exact"}],"termid":"MONDO:0019245","terms_by_termid":{"MONDO:0008083":null,"MONDO:0008767":null,"MONDO:0009744":null,"MONDO:0009756":null,"MONDO:0010155":null,"MONDO:0010526":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0019148":null,"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0019245"}}}


id: GO:0042650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane of prothylakoids, underdeveloped thylakoids found in etioplasts, lacking competent photosynthetic membranes.","definition_xrefs":["GOC:jl","PMID:11532175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid membrane","termid":"GO:0055035"},{"relation_name":"part_of","term_name":"prothylakoid","termid":"GO:0042649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"prothylakoid membrane","termid":"GO:0042650"}


id: PBO:0038370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_positively_regulated_by","termid":"PBO:0038370"}


id: GO:1990361
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of pyruvate kinase activity. PKM2 only exists as homotetramer when bound to beta-d-fructofuranose 1,6-bisphosphate (CHEBI:28013).","definition_xrefs":["GOC:bhm","PMID:24606918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate kinase complex","termid":"GO:1902912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PKM2 pyruvate kinase complex","synonyms":[{"name":"PKM2 homotetramer","type":"exact"}],"termid":"GO:1990361"}


id: PBO:0016102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase Zwf2 (predicted)","termid":"PBO:0016102"}


id: PBO:0113426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Selective autophagy receptor involved in aggrephagy and proteaphagy; ubiquitin (Ub)-binding protein that functions as a Ub-Atg8p adaptor in Ub-dependent autophagy; serves as a proteaphagy receptor for inactivate 26S proteasomes; contains a CUE domain that binds K48-and K63-linked Ub chains and monoubiquitin, facilitating intramolecular monoubiquitination; human TOLLIP is a functional CUE-domain homolog, that complements a null mutant, rescuing the hypersensitivity of the null mutant to Htt-96Q","termid":"PBO:0113426"}


id: GO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive CD4-positive, alpha-beta T cell acquires the specialized features of a CD4-positive, CD25-positive, alpha-beta regulatory T cell as part of an immune response.","definition_xrefs":["GOC:add","PMID:12093005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation involved in immune response","termid":"GO:0002294"},{"relation_name":"is_a","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","synonyms":[{"name":"CD4-positive, CD25-positive, alpha-beta T cell development involved in immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002298"}


id: GO:0033642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to gravitational stimulus (obsolete GO:0033642)","synonyms":[{"name":"response to gravitational stimulus","type":"broad"}],"termid":"GO:0033642"}


id: GO:0030235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of nitric oxide synthase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"nitric-oxide synthase regulator activity","secondary_identifiers":["Reactome:R-HSA-202144","Reactome:R-HSA-202129"],"synonyms":[{"name":"nitric oxide synthase regulator activity","type":"exact"}],"termid":"GO:0030235"}


id: PBO:0061298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPC intracellular cholesterol transporter 1","termid":"PBO:0061298"}


id: PBO:0064178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XE, pseudogene","termid":"PBO:0064178"}


id: PBO:0082490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I); phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity; required for H3K36 trimethylation but not dimethylation by Set2p; suggested stimulatory role in 80S formation during translation initiation; similar to the Drosophila dCDK12 and human CDK12 and probably CDK13","termid":"PBO:0082490"}


id: GO:1903326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tRNA metabolic process.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"tRNA metabolic process","termid":"GO:0006399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"regulation of tRNA metabolic process","synonyms":[{"name":"regulation of tRNA metabolism","type":"exact"}],"termid":"GO:1903326"}


id: PBO:0070437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabphilin 3A like (without C2 domains)","termid":"PBO:0070437"}


id: PBO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell end marker Tea3","termid":"PBO:0001937"}


id: PBO:0071558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 23","termid":"PBO:0071558"}


id: MONDO:0010146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory and suppurating type of tinea capitis, a skin infection caused by Trichophyton or Microsporum fungi, that predominantly affects the scalp and that is characterized by the development of painful crusty lesions covered with follicular pustules and surrounded by erythematous alopecic areas, that can later evolve into abscesses and leave permanent cicatricial alopecia. Lesions can be associated with regional lymphadenopathy.","definition_xrefs":["Orphanet:499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Kerion celsi","secondary_identifiers":["icd11.foundation:1449494917","MEDGEN:124446","OMIM:275240","SCTID:19087001","GARD:3109","UMLS:C0276742"],"synonyms":[{"name":"TINEA imbricata, susceptibility to","type":"related"},{"name":"Tinea capitis profunda","type":"related"},{"name":"Trichophyton infection","type":"related"},{"name":"susceptibility to Tinea imbricata","type":"related"},{"name":"trichophytia profunda barbae","type":"related"},{"name":"trichophytia profunda capitis","type":"related"}],"termid":"MONDO:0010146","xrefs":{"Monarch":{"xref_id":"0010146"}}}


id: GO:0099547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission by regulating translation occurring at the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"regulation of translation at synapse","termid":"GO:0140243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation at synapse, modulating synaptic transmission","termid":"GO:0099547"}


id: GO:1900699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of o-orsellinic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of o-orsellinic acid biosynthetic process","termid":"GO:1900698"},{"relation_name":"negatively_regulates","term_name":"o-orsellinic acid biosynthetic process","termid":"GO:1900584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of o-orsellinic acid biosynthetic process","synonyms":[{"name":"down regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"down regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"down regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"down regulation of o-orsellinic acid formation","type":"exact"},{"name":"down regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"down-regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"down-regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"down-regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"down-regulation of o-orsellinic acid formation","type":"exact"},{"name":"down-regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"downregulation of o-orsellinic acid anabolism","type":"exact"},{"name":"downregulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"downregulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"downregulation of o-orsellinic acid formation","type":"exact"},{"name":"downregulation of o-orsellinic acid synthesis","type":"exact"},{"name":"inhibition of o-orsellinic acid anabolism","type":"exact"},{"name":"inhibition of o-orsellinic acid biosynthesis","type":"exact"},{"name":"inhibition of o-orsellinic acid biosynthetic process","type":"narrow"},{"name":"inhibition of o-orsellinic acid formation","type":"exact"},{"name":"inhibition of o-orsellinic acid synthesis","type":"exact"},{"name":"negative regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"negative regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"negative regulation of o-orsellinic acid formation","type":"exact"},{"name":"negative regulation of o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900699"}


id: GO:0046164
data:
  {"annotated_genes":["SJAG_04192","SJAG_04954","SJAG_00237","SJAG_04048","SJAG_00244","SJAG_04870","SJAG_04320"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[80449,73804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[90442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[117047,90549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[62348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[74394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"alcohol catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"alcohol breakdown","type":"exact"},{"name":"alcohol catabolism","type":"exact"},{"name":"alcohol degradation","type":"exact"}],"termid":"GO:0046164","terms_by_termid":{"GO:0006062":null,"GO:0016095":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null,"GO:0071545":null}}


id: PATO:0000847
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000847 absolute auditory acuity (obsolete PATO:0000847)","termid":"PATO:0000847"}


id: MONDO:0004762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taylor syndrome","secondary_identifiers":["SCTID:39402007","MEDGEN:508874","UMLS:C0152078","ICD9:625.5","DOID:9346"],"synonyms":[{"name":"Taylor's syndrome","type":"exact"},{"name":"congestion-fibrosis syndrome","type":"exact"},{"name":"pelvic congestion syndrome","type":"exact"}],"termid":"MONDO:0004762","xrefs":{"Monarch":{"xref_id":"0004762"}}}


id: GO:0072277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a metanephric glomerular capillary. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular capillary formation","termid":"GO:0072104"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature morphogenesis","termid":"GO:0072276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular capillary formation","termid":"GO:0072277"}


id: SO:0000370
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA less than 200 nucleotides long, usually with a specific secondary structure, that acts to regulate gene expression. These include short ncRNAs such as piRNA, miRNA and siRNAs (among others).","definition_xrefs":["SO:ma","PMID:28541282","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small_regulatory_ncRNA","synonyms":[{"name":"small regulatory ncRNA","type":"exact"}],"termid":"SO:0000370"}


id: MONDO:0044213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of idiopathic urticaria.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"idiopathic urticaria","termid":"MONDO:0044211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acute idiopathic urticaria","secondary_identifiers":["SCTID:302161006","UMLS:C0578869","MEDGEN:662266"],"synonyms":[{"name":"acute idiopathic urticaria","type":"exact"},{"name":"idiopathic urticaria, acute","type":"exact"}],"termid":"MONDO:0044213","xrefs":{"Monarch":{"xref_id":"0044213"}}}


id: FYPO:0008303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during prophase of the first division of the meiotic cell cycle in which the number of sites at which the protein Rad51 accumulates is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal number of Rad51 foci during meiotic prophase I","termid":"FYPO:0008303"}


id: PBO:0073604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHROOM3 antisense RNA 1","termid":"PBO:0073604"}


id: PBO:0029154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cumene_hydroperoxide","termid":"PBO:0029154"}


id: PR:O74465
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrr1 gene.","definition_xrefs":["UniProtKB:O74465","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase required for RNAi-mediated heterochromatin assembly 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.03","synonyms":[{"name":"Spom972h-hrr1","type":"exact"}],"termid":"PR:O74465"}


id: MONDO:0013452
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88740],"is_not":false,"summary":null,"term":"MONDO:0013452"}]},"cv_name":"mondo","definition":"Multisystemic smooth muscle dysfunction syndrome is a disease in which the activity of smooth muscle throughout the body is impaired. This leads to widespread problems including blood vessel abnormalities, a decreased response of the pupils to light, a weak bladder, and weakened contractions of the muscles used for the digestion of food (hypo peristalsis). A certain mutation in the ACTA2 gene has been shown to cause this condition insome individuals.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"multisystemic smooth muscle dysfunction syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:404463","GARD:12811","MEDGEN:462551","OMIM:613834","UMLS:C3151201"],"synonyms":[{"name":"congenital mydriasis, patent ductus arteriosus, thoracic aortic aneurysm, and vasculopathy","type":"related"},{"name":"multisystemic smooth muscle dysfunction syndrome","type":"exact"},{"name":"mydriasis, congenital, with patent ductus arteriosus, thoracic aortic aneurysm, and vasculopathy","type":"related"}],"termid":"MONDO:0013452","terms_by_termid":{"MONDO:0013452":null},"xrefs":{"Monarch":{"xref_id":"0013452"}}}


id: PBO:0077754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 6","termid":"PBO:0077754"}


id: GO:0120164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological and developmental changes that occur in a conidium or asexual spore following release from dormancy up to the earliest signs of development such as swelling of conidia, adhesion and nuclear decondensation followed by hyphal growth several hours later. In many genera of plant pathogenic fungi (e.g. Magnaporthe, Colletotrichum, Ustilago), swelling of the hyphal tips to form appressorium, metabolic activities including respiration, RNA and protein synthesis and trehalose breakdown and changes in cell wall composition can be detected in conidium germination.","definition_xrefs":["PMID:18944978","PMID:25063657","PMID:27355215","PMID:17950638","DOI:10.1128/9781555815523.ch10","PMID:9529886","PMID:11377860","PMID:10835388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conidium germination","termid":"GO:0120164"}


id: GO:0075183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organized mass of hyphae is formed and numerous infective hyphae develop from the hyphae mass.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"infection cushion formation","synonyms":[{"name":"infection cushion formation on or near host","type":"exact"}],"termid":"GO:0075183"}


id: PBO:0091094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic spindle pole body protein, gamma tubulin complex linker-related Spo15","termid":"PBO:0091094"}


id: PBO:0072417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 22","termid":"PBO:0072417"}


id: PBO:0016921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug116","termid":"PBO:0016921"}


id: GO:0060672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a trophoblast cell elongates to contribute to the branching of the placenta.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph","PMID:16916377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"branching involved in labyrinthine layer morphogenesis","termid":"GO:0060670"},{"relation_name":"part_of","term_name":"epithelial cell differentiation involved in embryonic placenta development","termid":"GO:0060671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell morphogenesis involved in placental branching","termid":"GO:0060672"}


id: FYPO:0004455
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to nucleus","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01050"],"single_locus_genotype_uniquenames":["nur1delta"],"synonyms":[{"name":"decreased protein localisation to nucleus","type":"exact"},{"name":"reduced protein localization to nucleus","type":"exact"}],"termid":"FYPO:0004455","terms_by_termid":{"FYECO:0000137":null,"FYPO:0007073":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PATO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Easily reduced to powder or easily fragmentable or crumbly.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"friability","termid":"PATO:0002405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"friable","termid":"PATO:0002406"}


id: PBO:0005268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xap-5-like protein","termid":"PBO:0005268"}


id: PBO:0028384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere_inner_repeat","termid":"PBO:0028384"}


id: PBO:0034139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homoplasy_relationship_with","termid":"PBO:0034139"}


id: PBO:0049831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase like hydrolase domain containing 2","termid":"PBO:0049831"}


id: PBO:0027938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glucose_consumption","termid":"PBO:0027938"}


id: PBO:0059361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 7","termid":"PBO:0059361"}


id: GO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of C-type lectin to its receptor on the surface of a target cell, and resulting in cellular activation.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response activating cell surface receptor signaling pathway","termid":"GO:0002220"},{"relation_name":"is_a","term_name":"cellular response to lectin","termid":"GO:1990858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"stimulatory C-type lectin receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-5621481"],"synonyms":[{"name":"stimulatory C-type lectin receptor signalling pathway","type":"exact"},{"name":"stimulatory Ly49 family receptor signaling pathway","type":"narrow"}],"termid":"GO:0002223"}


id: PR:Q9Y7R5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An insulin-induced gene 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSIG family protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.05c","secondary_identifiers":["UniProtKB:Q9Y7R5"],"synonyms":[{"name":"SPCC306.05c","type":"related"},{"name":"Spom972h-INSIG1","type":"exact"}],"termid":"PR:Q9Y7R5"}


id: GO:0016645
data:
  {"annotated_genes":["SJAG_01668","SJAG_01903","SJAG_00106","SJAG_02388","SJAG_01466","SJAG_01126","SJAG_01061","SJAG_03712","SJAG_04156","SJAG_00120","SJAG_01198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004146"},{"annotations":[89540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036382"},{"annotations":[72193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004487"},{"annotations":[57825,77486,78373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004488"},{"annotations":[100301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106312"},{"annotations":[100302,98536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106313"},{"annotations":[72015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004657"},{"annotations":[79665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004735"},{"annotations":[57498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004754"},{"annotations":[111670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004755"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00120":null,"SJAG_01061":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01466":null,"SJAG_01668":null,"SJAG_01903":null,"SJAG_02388":null,"SJAG_03712":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016645","terms_by_termid":{"GO:0004146":null,"GO:0004487":null,"GO:0004488":null,"GO:0004657":null,"GO:0004735":null,"GO:0004754":null,"GO:0004755":null,"GO:0036382":null,"GO:0106312":null,"GO:0106313":null}}


id: PBO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tryptophan","termid":"PBO:0002116"}


id: PBO:0038708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 2","termid":"PBO:0038708"}


id: GO:0097664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Grr1 in S. cerevisiae (Pof2 in S. pombe).","definition_xrefs":["GOC:jd","GOC:vw","PMID:10213692","PMID:15147268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Grr1/Pof2 ubiquitin ligase complex","termid":"GO:0097664"}


id: PATO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000378 absolute frequency value (obsolete PATO:0000378)","termid":"PATO:0000378"}


id: PBO:0083016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dehydrogenase involved in ubiquinone and sphingolipid metabolism; converts 4-hydroxybenzaldehyde into 4-hydroxybenzoate for ubiquinone anabolism, hexadecenal to hexadecenoic acid in sphingosine 1-phosphate catabolism; human homolog ALDH3A2, mutated in Sjogren-Larsson syndrome, can rescue yeast hfd1 mutant; human ALDH3A1, but not ALDH3A2, rescues pABA- respiratory growth phenotype of hfd1 null; data suggest that dual functions of Hfd1p have diverged in human ALDH3A1, ALDH3A2","termid":"PBO:0083016"}


id: PR:Q09894
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.07c gene.","definition_xrefs":["UniProtKB:Q09894","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.07c","synonyms":[{"name":"Spom972h-SPAC24B11.07c","type":"exact"}],"termid":"PR:Q09894"}


id: GO:0043633
data:
  {"annotated_genes":["SJAG_03984","SJAG_16455","SJAG_01431","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102949],"is_not":false,"summary":null,"term":"GO:0043633"},{"annotations":[115257,78099,101513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043634"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an RNA molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3'-end of the target RNA.","definition_xrefs":["GOC:dgf","GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"modification-dependent macromolecule catabolic process","termid":"GO:0043632"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01431":null,"SJAG_03984":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyadenylation-dependent RNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043633","terms_by_termid":{"GO:0043633":null,"GO:0043634":null}}


