# terms

id: MONDO:0002900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastoma arising from the cerebral hemispheres.","definition_xrefs":["NCIT:C4826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"intracranial primitive neuroectodermal tumor","termid":"MONDO:0003142"},{"relation_name":"is_a","term_name":"neuroblastoma","termid":"MONDO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cerebral neuroblastoma","secondary_identifiers":["SCTID:281560004","DOID:4164","MEDGEN:107851","UMLS:C0559458","DOID:0080905"],"synonyms":[{"name":"central nervous system neuroblastoma","type":"exact"},{"name":"cerebral hemispheric neuroblastoma","type":"exact"},{"name":"cerebral neuroblastoma","type":"exact"},{"name":"cerebral neuroblastoma, PNET","type":"exact"},{"name":"neuroblastoma of brain","type":"exact"},{"name":"neuroblastoma of cerebral hemispheres","type":"exact"},{"name":"neuroblastoma of cerebrum","type":"exact"},{"name":"neuroblastoma of telencephalon","type":"exact"},{"name":"neuroblastoma of the cerebral hemisphere","type":"exact"},{"name":"neuroblastoma of the cerebral hemispheres","type":"exact"},{"name":"neuroblastoma of the cerebrum","type":"exact"},{"name":"telencephalon neuroblastoma","type":"exact"}],"termid":"MONDO:0002900","xrefs":{"Monarch":{"xref_id":"0002900"}}}


id: PBO:0026708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_stalled_replication_fork","termid":"PBO:0026708"}


id: GO:0001757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individual somites establish identity during embryogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segment specification","termid":"GO:0007379"},{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somite specification","termid":"GO:0001757"}


id: FYPO:0007023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form 1-methylguanosine occurs to a greater extent than normal.","definition_xrefs":["PMID:25404562","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"},{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased tRNA guanosine 1-methylation","synonyms":[{"name":"increased 1-methylguanosine level in tRNA","type":"related"},{"name":"increased guanosine N1-methylation","type":"exact"},{"name":"increased tRNA 1-methylguanosine formation","type":"exact"},{"name":"increased tRNA guanosine 1-methylation during mitotic cell cycle","type":"related"},{"name":"increased tRNA guanosine 1-methylation during vegetative growth","type":"exact"},{"name":"increased tRNA m1G formation","type":"exact"}],"termid":"FYPO:0007023"}


id: GO:0015109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of chromate from one side of a membrane to the other. Chromate is the anion of chromic acid, H2CrO4 (aq) or CrO3.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chromate transmembrane transporter activity","termid":"GO:0015109"}


id: MONDO:0001440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconjunctivitis","termid":"MONDO:0004768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neurotrophic keratoconjunctivitis","secondary_identifiers":["SCTID:77080005","DOID:12125","MEDGEN:509777","UMLS:C0155084","ICD9:370.35"],"termid":"MONDO:0001440","xrefs":{"Monarch":{"xref_id":"0001440"}}}


id: PBO:0081285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 70","termid":"PBO:0081285"}


id: PBO:0038734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 7A","termid":"PBO:0038734"}


id: GO:0002607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"regulates","term_name":"myeloid dendritic cell antigen processing and presentation","termid":"GO:0002469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell antigen processing and presentation","termid":"GO:0002607"}


id: PBO:0057881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3185","termid":"PBO:0057881"}


id: GO:0071759
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgX isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgX immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgX immunoglobulin complex","termid":"GO:0071759"}


id: PBO:0005849
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.11","termid":"PBO:0005849"}


id: GO:0030653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a beta-lactam antibiotic, any member of a class of natural or semisynthetic antibiotics whose characteristic feature is a strained, four-membered beta-lactam ring. They include the penicillins and many of the cephalosporins.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"beta-lactam antibiotic metabolic process","synonyms":[{"name":"beta-lactam antibiotic metabolism","type":"exact"}],"termid":"GO:0030653"}


id: PBO:0078455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 7 (pseudogene)","termid":"PBO:0078455"}


id: PBO:0034249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causes_or_contributes_to_condition","termid":"PBO:0034249"}


id: GO:0031432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to titin, any of a family of giant proteins found in striated and smooth muscle. In striated muscle, single titin molecules span half the sarcomere, with their N- and C-termini in the Z-disc and M-line, respectively.","definition_xrefs":["GOC:mah","PMID:10481174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"titin binding","termid":"GO:0031432"}


id: FYPO:0002579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mature transfer RNA (tRNA) measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total tRNA or a specific tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"},{"relation_name":"is_a","term_name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered mature tRNA level during vegetative growth","synonyms":[{"name":"abnormal tRNA level during vegetative growth","type":"broad"},{"name":"altered cellular mature tRNA level during vegetative growth","type":"exact"},{"name":"altered mature cellular transfer RNA level during vegetative growth","type":"exact"},{"name":"altered mature tRNA level during mitotic cell cycle","type":"related"},{"name":"altered mature tRNA transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0002579"}


id: GO:1905052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of base-excision repair.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:ah","PMID:18973764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of base-excision repair","termid":"GO:1905051"},{"relation_name":"negatively_regulates","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"negative regulation of base-excision repair","synonyms":[{"name":"down regulation of BER","type":"exact"},{"name":"down regulation of base-excision repair","type":"exact"},{"name":"down-regulation of BER","type":"exact"},{"name":"down-regulation of base-excision repair","type":"exact"},{"name":"downregulation of BER","type":"exact"},{"name":"downregulation of base-excision repair","type":"exact"},{"name":"inhibition of BER","type":"narrow"},{"name":"inhibition of base-excision repair","type":"narrow"},{"name":"negative regulation of BER","type":"exact"}],"termid":"GO:1905052"}


id: GO:1901577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alkane biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"alkane biosynthetic process","termid":"GO:0043447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alkane biosynthetic process","synonyms":[{"name":"regulation of alkane anabolism","type":"exact"},{"name":"regulation of alkane biosynthesis","type":"exact"},{"name":"regulation of alkane formation","type":"exact"},{"name":"regulation of alkane synthesis","type":"exact"}],"termid":"GO:1901577"}


id: GO:0061826
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The ring structure surrounding the podosome core, containing proteins such as vinculin and talin.","definition_xrefs":["PMID:23158496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"podosome","termid":"GO:0002102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"podosome ring","termid":"GO:0061826"}


id: PBO:0083209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF RPC19/YNL113W, an RNA polymerase subunit","termid":"PBO:0083209"}


id: MONDO:0011845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 3","secondary_identifiers":["UMLS:C1843782","OMIM:607498","MEDGEN:375283"],"synonyms":[{"name":"MGR3","type":"related"},{"name":"migraine with or without aura, susceptibility to, 3","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0011845","xrefs":{"Monarch":{"xref_id":"0011845"}}}


id: PBO:0062598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 8 pseudogene","termid":"PBO:0062598"}


id: MONDO:0044983
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A benign mesenchymal neoplasm composed of adipose (fatty) tissue. The most common representative of this category is the lipoma.","definition_xrefs":["NCIT:C4502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"tumor of adipose tissue","termid":"MONDO:0021354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"benign lipomatous neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0346118","MEDGEN:91084","icd11.foundation:226447034"],"synonyms":[{"name":"adipose tissue benign connective and soft tissue neoplasm","type":"exact"},{"name":"benign adipose tissue neoplasm","type":"exact"},{"name":"benign adipose tissue tumor","type":"exact"},{"name":"benign adipose tissue tumour","type":"exact"},{"name":"benign connective and soft tissue neoplasm of adipose tissue","type":"exact"},{"name":"benign lipomatous neoplasm","type":"exact"},{"name":"benign lipomatous tumor","type":"exact"},{"name":"benign lipomatous tumour","type":"exact"},{"name":"benign neoplasm of adipose tissue","type":"exact"},{"name":"benign neoplasm of the adipose tissue","type":"exact"},{"name":"benign tumor of adipose tissue","type":"related"},{"name":"benign tumor of the adipose tissue","type":"exact"},{"name":"benign tumour of adipose tissue","type":"related"},{"name":"benign tumour of the adipose tissue","type":"exact"}],"termid":"MONDO:0044983","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0044983"}}}


id: GO:1903673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cleavage furrow formation that is involved in mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleavage furrow formation","termid":"GO:0036089"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"mitotic cleavage furrow formation","synonyms":[{"name":"cleavage furrow positioning involved in mitotic cell cycle","type":"narrow"}],"termid":"GO:1903673"}


id: PBO:0080136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0080136"}


id: FYPO:0001819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which phosphoribosylformylglycinamidine cyclo-ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphoribosylformylglycinamidine cyclo-ligase activity","termid":"FYPO:0001818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished phosphoribosylformylglycinamidine cyclo-ligase activity","synonyms":[{"name":"abolished AIR synthase activity","type":"exact"},{"name":"abolished AIR synthetase activity","type":"exact"},{"name":"phosphoribosylformylglycinamidine cyclo-ligase activity abolished","type":"exact"}],"termid":"FYPO:0001819"}


id: GO:0006741
data:
  {"annotated_genes":["SJAG_01582","SJAG_01566","SJAG_03946"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72878,79755,81671],"is_not":false,"summary":null,"term":"GO:0006741"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide phosphate (NADP+), a coenzyme that interconverts with its reduced form, NADPH, in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"NADP+ metabolic process","termid":"GO:0006739"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01566":null,"SJAG_01582":null,"SJAG_03946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"NADP+ biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"NADP (oxidized) biosynthesis","type":"exact"},{"name":"NADP (oxidized) biosynthetic process","type":"exact"},{"name":"NADP (reduced) biosynthesis","type":"exact"},{"name":"NADP (reduced) biosynthetic process","type":"exact"},{"name":"NADP anabolism","type":"exact"},{"name":"NADP biosynthesis","type":"exact"},{"name":"NADP biosynthetic process","type":"exact"},{"name":"NADP formation","type":"exact"},{"name":"NADP synthesis","type":"exact"},{"name":"NADPH biosynthesis","type":"exact"},{"name":"NADPH biosynthetic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate biosynthesis","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate biosynthetic process","type":"exact"},{"name":"oxidized NADP biosynthesis","type":"exact"},{"name":"oxidized NADP biosynthetic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate biosynthesis","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate biosynthetic process","type":"exact"},{"name":"reduced NADP biosynthesis","type":"exact"},{"name":"reduced NADP biosynthetic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate biosynthesis","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate biosynthetic process","type":"exact"}],"termid":"GO:0006741","terms_by_termid":{"GO:0006741":null}}


id: PBO:0017773
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha Amylase Homolog","termid":"PBO:0017773"}


id: GO:0015615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-allose(out) = ADP + phosphate + D-allose(in).","definition_xrefs":["RHEA:29799","PMID:9401019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"},{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type D-allose transporter activity","secondary_identifiers":["EC:7.5.2.8"],"synonyms":[{"name":"D-allose porter activity","type":"broad"},{"name":"D-allose-importing ATPase activity","type":"related"}],"termid":"GO:0015615"}


id: PBO:0039040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 2","termid":"PBO:0039040"}


id: PBO:0027749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_DNA_replication_gene_mRNA_during_nitrogen_starvation","termid":"PBO:0027749"}


id: PBO:0047648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 1","termid":"PBO:0047648"}


id: PBO:0066098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASAL2 antisense RNA 1","termid":"PBO:0066098"}


id: GO:0015057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor activity that is activated by cleavage by thrombin, which exposes a tethered ligand corresponding to the new N-terminus, which binds to the receptor and activates it.","definition_xrefs":["GOC:ai","GOC:pg","PMID:20423334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase-activated receptor activity","termid":"GO:0001648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thrombin-activated receptor activity","secondary_identifiers":["GO:0010655"],"synonyms":[{"name":"thrombin receptor activity","type":"exact"},{"name":"thrombin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0015057"}


id: GO:1905410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic cohesin unloading.","definition_xrefs":["PMID:26687354","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic cohesin unloading (obsolete GO:1905410)","termid":"GO:1905410"}


id: GO:0039715
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A viral factory located in the nucleus of a host cell.","definition_xrefs":["VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral factory","termid":"GO:0039713"},{"relation_name":"part_of","term_name":"host cell nucleus","termid":"GO:0042025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nuclear viral factory","termid":"GO:0039715"}


id: MOD:00836
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two (2)H deuterium atoms for two (1)H protium atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium substituted residue","termid":"MOD:00786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium disubstituted residue","synonyms":[{"name":"D(H)2Res","type":"exact"}],"termid":"MOD:00836"}


id: MONDO:0032877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with nonspecific brain abnormalities and with or without seizures","secondary_identifiers":["UMLS:C5231470","MEDGEN:1684757","OMIM:618709"],"synonyms":[{"name":"NEDBAS","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH NONSPECIFIC BRAIN ABNORMALITIES AND WITH OR WITHOUT SEIZURES","type":"related"},{"name":"neurodevelopmental disorder with nonspecific brain abnormalities and with or without seizures","type":"exact"}],"termid":"MONDO:0032877","xrefs":{"Monarch":{"xref_id":"0032877"}}}


id: GO:0010367
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages. Isoamylases in animals are localized in the extracellular space.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoamylase complex","termid":"GO:0043033"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"extracellular isoamylase complex","termid":"GO:0010367"}


id: PR:O42973
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC20F10.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20F10.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.03","synonyms":[{"name":"Spom972h-SPBC20F10.03","type":"exact"}],"termid":"PR:O42973"}


id: MONDO:0000808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatoid adenocarcinoma (obsolete MONDO:0000808)","termid":"MONDO:0000808","xrefs":{"Monarch":{"xref_id":"0000808"}}}


id: PBO:0067898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 200","termid":"PBO:0067898"}


id: PBO:0064872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26 pseudogene 5","termid":"PBO:0064872"}


id: PBO:0031250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_crossover","termid":"PBO:0031250"}


id: PBO:0049701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"highly accelerated region 1A","termid":"PBO:0049701"}


id: PBO:0030344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_cellular_response_to_hypoxia","termid":"PBO:0030344"}


id: PBO:0045280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 31","termid":"PBO:0045280"}


id: GO:0102296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1(10),2-dien-4-oate + H2O = 9,17-dioxo-1,2,3,4,10,19-hexanorandrostan-5-oate + (2Z,4Z)-2-hydroxyhexa-2,4-dienoate + H+.","definition_xrefs":["GOC:pz","RHEA:32035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4,5-9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase activity","secondary_identifiers":["EC:3.7.1.17","MetaCyc:RXN-12718"],"termid":"GO:0102296"}


id: GO:0031005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a filamin, any member of a family of high molecular mass cytoskeletal proteins that crosslink actin filaments to form networks and stress fibers. Filamins contain an amino-terminal alpha-actinin-like actin binding domain, which is followed by a rod-domain composed of 4 to 24 100-residue repetitive segments including a carboxy-terminal dimerization domain.","definition_xrefs":["PMID:11336782","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"filamin binding","secondary_identifiers":["GO:0031008","GO:0031007","GO:0031006"],"synonyms":[{"name":"ABP-278/276 binding","type":"narrow"},{"name":"ABP-280 binding","type":"narrow"},{"name":"ABPL binding","type":"narrow"},{"name":"alpha-filamin binding","type":"narrow"},{"name":"beta-filamin binding","type":"narrow"},{"name":"filamin A binding","type":"narrow"},{"name":"filamin B binding","type":"narrow"},{"name":"filamin C binding","type":"exact"},{"name":"filamin-1 binding","type":"narrow"},{"name":"filamin-2 binding","type":"narrow"},{"name":"filamin-3 binding","type":"narrow"},{"name":"filamin-A binding","type":"narrow"},{"name":"filamin-B binding","type":"exact"},{"name":"filamin-C binding","type":"narrow"},{"name":"gamma-filamin binding","type":"narrow"}],"termid":"GO:0031005"}


id: MONDO:0009610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3-methylglutaconic aciduria (3-MGA) type I is an inborn error of leucine metabolism with a variable clinical phenotype ranging from mildly delayed speech to psychomotor retardation, coma, failure to thrive, metabolic acidosis and dystonia.","definition_xrefs":["Orphanet:67046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 1","secondary_identifiers":["GARD:10321","NANDO:1200990","SCTID:237951008","UMLS:C0342727","DOID:0110002","icd11.foundation:899935975","MEDGEN:90994","NCIT:C98683","OMIM:250950","MESH:C562801"],"synonyms":[{"name":"3 alpha methylglutaconic aciduria type I","type":"related"},{"name":"3 methylglutaconic aciduria type 1","type":"related"},{"name":"3 methylglutaconyl CoA hydratase deficiency","type":"related"},{"name":"3-METHYLGLUTACONIC aciduria, type I","type":"related"},{"name":"3-MGCA type I (3-MGCA-1)","type":"related"},{"name":"3-Methylglutaconic aciduria, type 1","type":"related"},{"name":"3-Mg-Coa-hydratase deficiency","type":"related"},{"name":"3-methylglutaconic aciduria caused by mutation in AUH","type":"exact"},{"name":"3-methylglutaconic aciduria caused by mutation in auh","type":"exact"},{"name":"3-methylglutaconic aciduria type 1","type":"exact"},{"name":"3-methylglutaconic aciduria type I","type":"exact"},{"name":"3-methylglutaconyl-CoA hydratase deficiency","type":"exact"},{"name":"3-methylglutaconyl-CoA hydratase deficiency (auh defect)","type":"related"},{"name":"3-methylglutaconyl-Coa hydratase deficiency","type":"related"},{"name":"3MG CoA hydratase deficiency","type":"related"},{"name":"3MG-CoA hydratase deficiency","type":"exact"},{"name":"AUH 3-methylglutaconic aciduria","type":"exact"},{"name":"MGA type I","type":"exact"},{"name":"MGA1","type":"exact"},{"name":"MGCA1","type":"related"},{"name":"Mga, type 1","type":"related"},{"name":"auh 3-methylglutaconic aciduria","type":"exact"}],"termid":"MONDO:0009610","xrefs":{"Monarch":{"xref_id":"0009610"}}}


id: MONDO:0012653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent hyperplastic primary vitreous","termid":"MONDO:0019631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"persistent hyperplastic primary vitreous, autosomal dominant","secondary_identifiers":["MEDGEN:370101","GARD:18168","OMIM:611308","UMLS:C1969784"],"synonyms":[{"name":"PHPVAD","type":"exact"},{"name":"persistent hyperplastic primary vitreous, autosomal dominant","type":"exact"}],"termid":"MONDO:0012653","xrefs":{"Monarch":{"xref_id":"0012653"}}}


id: PBO:0087604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CCR4-NOT transcriptional regulatory complex; CCR4-NOT complex is evolutionarily-conserved and involved in controlling mRNA initiation, elongation, and degradation","termid":"PBO:0087604"}


id: PBO:0071642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 6","termid":"PBO:0071642"}


id: PBO:0074727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 84","termid":"PBO:0074727"}


id: MONDO:0018409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic disorder with obstructive azoospermia (obsolete MONDO:0018409)","secondary_identifiers":["Orphanet:400003"],"synonyms":[{"name":"rare genetic disorder due to impaired sperm transport","type":"exact"}],"termid":"MONDO:0018409","xrefs":{"Monarch":{"xref_id":"0018409"}}}


id: PBO:0042135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholecystokinin A receptor","termid":"PBO:0042135"}


id: PBO:0005399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent FMN reductase (predicted)","termid":"PBO:0005399"}


id: PBO:0053657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 710","termid":"PBO:0053657"}


id: MONDO:0007117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete angioedema, hereditary, type 1/2 (obsolete MONDO:0007117)","termid":"MONDO:0007117","xrefs":{"Monarch":{"xref_id":"0007117"}}}


id: MONDO:0035452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare bone disease characterized by spontaneous adult-onset tarsal navicular osteonecrosis. Patients present with chronic mid- and hindfoot pain, swelling and tenderness over the dorsomedial aspect of the midfoot, flattening of the medial longitudinal arch, and pes planovarus. Radiographic findings include comma-shaped deformity due to collapse of the lateral part of the navicular bone and medial or dorsal protrusion of a portion or the entire bone. The condition may be bilateral or asymmetric and associated with pathological fractures.","definition_xrefs":["Orphanet:566943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mueller-weiss syndrome","secondary_identifiers":["UMLS:C4761149","GARD:22283","MEDGEN:1708314"],"synonyms":[{"name":"Brailsford disease","type":"exact"},{"name":"Mueller-Weiss osteonecrosis of the tarsal bone","type":"exact"}],"termid":"MONDO:0035452","xrefs":{"Monarch":{"xref_id":"0035452"}}}


id: GO:0051035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of DNA, deoxyribonucleic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid transmembrane transporter activity","termid":"GO:0051032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"DNA transmembrane transporter activity","termid":"GO:0051035"}


id: GO:0061776
data:
  {"annotated_genes":["SJAG_03926","SJAG_00871","SJAG_00768","SJAG_03698","SJAG_02545","SJAG_03832","SJAG_01067","SJAG_03161","SJAG_01332","SJAG_03682","SJAG_01831","SJAG_03436","SJAG_05019","SJAG_03418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89646,90896,92774,105101,108251,109695,109780,114036,115378,117917,118533,118877,119076,119604],"is_not":false,"summary":null,"term":"GO:0061776"}]},"cv_name":"molecular_function","definition":"A DNA binding activity in which a protein complex interacts with at least one DNA duplex to encircle the DNA molecules with a loose fitting ring.","definition_xrefs":["PMID:26687354","GOC:dph","GOC:vw","PMID:16179255","PMID:29358048","PMID:37820734","PMID:27797071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00768":null,"SJAG_00871":null,"SJAG_01067":null,"SJAG_01332":null,"SJAG_01831":null,"SJAG_02545":null,"SJAG_03161":null,"SJAG_03418":null,"SJAG_03436":null,"SJAG_03682":null,"SJAG_03698":null,"SJAG_03832":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"ATP-dependent topological DNA co-entrapment activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent ring closure activity","type":"exact"},{"name":"topological DNA entrapment activity","type":"related"}],"termid":"GO:0061776","terms_by_termid":{"GO:0061776":null}}


id: PBO:0075817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slingshot protein phosphatase 1","termid":"PBO:0075817"}


id: MONDO:0800341
data:
  {"annotated_genes":["SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87173],"is_not":false,"summary":null,"term":"MONDO:0800341"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cap myopathy","termid":"MONDO:0015753"},{"relation_name":"is_a","term_name":"TPM3-related myopathy","termid":"MONDO:0100108"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital myopathy 4A, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:255310"],"synonyms":[{"name":"CAPM1","type":"exact"},{"name":"CFTD","type":"exact"},{"name":"CFTDM","type":"exact"},{"name":"NEM1","type":"exact"},{"name":"cap myopathy 1","type":"exact"},{"name":"fiber-type disproportion myopathy, congenital","type":"exact"},{"name":"myopathy, congenital, with fiber-type disproportion","type":"exact"},{"name":"nemaline myopathy 1","type":"exact"}],"termid":"MONDO:0800341","terms_by_termid":{"MONDO:0800341":null},"xrefs":{"Monarch":{"xref_id":"0800341"}}}


id: PBO:0061143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 6","termid":"PBO:0061143"}


id: GO:0009210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate catabolic process","termid":"GO:0009149"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate catabolic process","termid":"GO:0009203"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleoside triphosphate catabolic process","synonyms":[{"name":"pyrimidine ribonucleoside triphosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009210"}


id: GO:0015052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta3-adrenergic receptors.","definition_xrefs":["IUPHAR_GPCR:1274","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-adrenergic receptor activity","termid":"GO:0004939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"beta3-adrenergic receptor activity","synonyms":[{"name":"beta3 adrenoceptor","type":"exact"}],"termid":"GO:0015052"}


id: PBO:0028553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_during_mitotic_interphase,_with_protein_mislocalized_to_cytoplasmic_foci","termid":"PBO:0028553"}


id: PBO:0025446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-P ortholog Fta2","termid":"PBO:0025446"}


id: PR:000027604
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3, initiator methionine removed methylated form that is recognized by the HP1-like protein Swi6 in Schizosaccharomyces pombe. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00663.","definition_xrefs":["PomBase:MAH","PRO:DAN","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me(K9)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K9me","type":"exact"},{"name":"hht3/InitMet-/Me:(K10)","type":"exact"},{"name":"hht3/Me(K9)","type":"exact"}],"termid":"PR:000027604"}


id: MONDO:0957495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemolytic uremic syndrome","termid":"MONDO:0957097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemolytic uremic syndrome, atypical, 8, with rhizomelic short stature","secondary_identifiers":["OMIM:301110","MEDGEN:1840221","UMLS:C5829585"],"termid":"MONDO:0957495","xrefs":{"Monarch":{"xref_id":"0957495"}}}


id: PBO:0026689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tamoxifen","termid":"PBO:0026689"}


id: SO:1000002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence alteration where the length of the change in the variant is the same as that of the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substitution","secondary_identifiers":["loinc:LA6690-7"],"termid":"SO:1000002"}


id: PBO:0027333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_menadione","termid":"PBO:0027333"}


id: GO:0044874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a lipoprotein is transported to, or maintained in, a specific location in an outer membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein localization to membrane","termid":"GO:0044873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lipoprotein localization to outer membrane","termid":"GO:0044874"}


id: GO:1902596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication origin binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:11850415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA replication origin binding","synonyms":[{"name":"down regulation of ARS binding","type":"narrow"},{"name":"down regulation of DNA replication origin binding","type":"exact"},{"name":"down-regulation of ARS binding","type":"narrow"},{"name":"down-regulation of DNA replication origin binding","type":"exact"},{"name":"downregulation of ARS binding","type":"narrow"},{"name":"downregulation of DNA replication origin binding","type":"exact"},{"name":"inhibition of ARS binding","type":"narrow"},{"name":"inhibition of DNA replication origin binding","type":"narrow"},{"name":"negative regulation of ARS binding","type":"narrow"}],"termid":"GO:1902596"}


id: PBO:0078016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 6","termid":"PBO:0078016"}


id: PBO:0057255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 466","termid":"PBO:0057255"}


id: PBO:0056827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltase-glucoamylase","termid":"PBO:0056827"}


id: MONDO:0008207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial chondromalacia patellae is an inherited bone disorder described in 5 families in 1963 and is characterized by localized patellar pain and male-to-male transmission.","definition_xrefs":["Orphanet:1428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondromalacia","termid":"MONDO:0002342"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondromalacia patellae","secondary_identifiers":["OMIM:168900","ICD10CM:M22.4","SCTID:36071006","UMLS:C0008475","icd11.foundation:1589625540","MESH:D046789","DOID:13357","MEDGEN:939","ICD9:717.7"],"synonyms":[{"name":"chondromalacia of patella","type":"exact"},{"name":"chondromalacia patellae","type":"exact"},{"name":"familial chondromalacia patellae","type":"related"},{"name":"patella chondromalacia","type":"exact"},{"name":"patella, chondromalacia OF","type":"related"},{"name":"softening of articular cartilage of patella","type":"exact"}],"termid":"MONDO:0008207","xrefs":{"Monarch":{"xref_id":"0008207"}}}


id: PBO:0054893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2307","termid":"PBO:0054893"}


id: MONDO:0005099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intracranial hemorrhage into the subarachnoid space.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subarachnoid hemorrhage","secondary_identifiers":["HP:0002138","MEDGEN:11625","MESH:D013345","UMLS:C0038525","ICD9:430","SCTID:21454007","EFO:0000713"],"synonyms":[{"name":"subarachnoid haemorrhage (disease)","type":"exact"},{"name":"subarachnoid hemorrhage","type":"exact"},{"name":"subarachnoid hemorrhage (disease)","type":"exact"}],"termid":"MONDO:0005099","xrefs":{"Monarch":{"xref_id":"0005099"}}}


id: MONDO:0859154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"popliteal pterygium syndrome","termid":"MONDO:0017435"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bartsocas-Papas syndrome 2","secondary_identifiers":["UMLS:C5543445","OMIM:619339","GARD:16444","MEDGEN:1778443"],"termid":"MONDO:0859154","xrefs":{"Monarch":{"xref_id":"0859154"}}}


id: GO:0034856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,4E)-2-hydroxyhexa-2,4-dienoate + H2O = 4-hydroxy-2-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r1281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyhexa-2,4-dienoate hydratase activity","secondary_identifiers":["RHEA:32535","EC:4.2.1.132"],"termid":"GO:0034856"}


id: PR:O14156
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein phosphatase 1K, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01064","PRO:DNx","PANTHER:PTHR13832:SF93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.03c","secondary_identifiers":["UniProtKB:O14156"],"synonyms":[{"name":"PP2C-4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPM1K","type":"exact"}],"termid":"PR:O14156"}


id: PBO:0044668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylarginine dimethylaminohydrolase 1","termid":"PBO:0044668"}


id: PBO:0087306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and WD-repeat protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; also required for meiotic double-strand break recombination; null mutants have superkiller phenotype","termid":"PBO:0087306"}


id: MONDO:0014512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PURA-related severe neonatal hypotonia-seizures-encephalopathy syndrome due to a point mutation is a rare, genetic neurological disease, with a highly variable phenotype, typically characterized by neonatal hypotonia, respiratory and feeding difficulties, global development delay (often with nonverbal and frequently non-ambulatory progression) and myopathic facies. Other frequently present features include seizures (or seizure-like episodes), visual impairment and encephalopathy.","definition_xrefs":["Orphanet:438216"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"PURA-related severe neonatal hypotonia-seizures-encephalopathy syndrome due to a point mutation","secondary_identifiers":["DOID:0070061","OMIM:616158","GARD:17740"],"synonyms":[{"name":"MRD31","type":"exact"},{"name":"PURA-related severe neonatal hypotonia-seizures-encephalopathy syndrome due to a point mutation","type":"exact"},{"name":"autosomal dominant intellectual disability 31","type":"exact"},{"name":"autosomal dominant mental retardation 31","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 31","type":"related"},{"name":"intellectual disability, autosomal dominant 31","type":"related"},{"name":"intellectual disability, autosomal dominant type 31","type":"exact"},{"name":"mental retardation, autosomal dominant 31","type":"related"},{"name":"mental retardation, autosomal dominant type 31","type":"exact"},{"name":"neurodevelopmental disorder with neonatal respiratory insufficiency, hypotonia, and feeding difficulties","type":"exact"}],"termid":"MONDO:0014512","xrefs":{"Monarch":{"xref_id":"0014512"}}}


id: MOD:01802
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serinium (protonated L-serine) residue to an N,N,N-trimethyl-L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-serine (L-serinium) residue","termid":"MOD:01801"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated residue","termid":"MOD:01687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-serine (from L-serinium)","synonyms":[{"name":"N2Me3Ala","type":"exact"}],"termid":"MOD:01802"}


id: GO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The reduction of the ascorbate free radical to a stable form.","definition_xrefs":["GOC:ai","GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete ascorbate stabilization (obsolete GO:0000044)","synonyms":[{"name":"ascorbate stabilization","type":"exact"},{"name":"vitamin C stabilization","type":"exact"}],"termid":"GO:0000044"}


id: GO:1902866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["PMID:16872597","GOC:mr","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retina development in camera-type eye","synonyms":[{"name":"regulation of retina development in camera-style eye","type":"exact"},{"name":"regulation of retinal development","type":"related"}],"termid":"GO:1902866"}


id: PBO:0040728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCLAF1 and THRAP3 family member 3","termid":"PBO:0040728"}


id: GO:0007258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into a JUN protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"part_of","term_name":"JNK cascade","termid":"GO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"JUN phosphorylation","termid":"GO:0007258"}


id: MONDO:0016375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired peripheral movement disorder (obsolete MONDO:0016375)","secondary_identifiers":["Orphanet:221114"],"termid":"MONDO:0016375","xrefs":{"Monarch":{"xref_id":"0016375"}}}


id: MONDO:0011377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the SCN5A gene, encoding sodium channel protein type 5 subunit alpha. It is characterized by a prolonged QT interval that may result in torsade de pointes, ventricular fibrillation and/or sudden cardiac death.","definition_xrefs":["NCIT:C137959"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 3","secondary_identifiers":["MEDGEN:349087","UMLS:C1859062","GARD:3286","MESH:C565840","OMIM:603830","DOID:0110646"],"synonyms":[{"name":"LQT3","type":"exact"},{"name":"SCN5A long QT syndrome","type":"exact"},{"name":"long QT syndrome 2/3, digenic","type":"related"},{"name":"long QT syndrome 3","type":"exact"},{"name":"long QT syndrome 3, acquired, susceptibility to","type":"related"},{"name":"long QT syndrome 3/6, digenic","type":"related"},{"name":"long QT syndrome caused by mutation in SCN5A","type":"exact"},{"name":"long QT syndrome type 3","type":"exact"}],"termid":"MONDO:0011377","xrefs":{"Monarch":{"xref_id":"0011377"}}}


id: PBO:0065453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 1","termid":"PBO:0065453"}


id: PBO:0046733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ewing sarcoma associated transcript 1","termid":"PBO:0046733"}


id: GO:0007447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in defined areas of the imaginal disc that will undergo specific cell differentaiton. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form.","definition_xrefs":["GOC:jid","GOC:isa_complete","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc pattern formation","termid":"GO:0007447"}


id: PBO:0046533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERRFI1 divergent transcript","termid":"PBO:0046533"}


id: MONDO:0002038
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A carcinoma that arises from the head and neck region. Representative examples include oral cavity squamous cell carcinoma, laryngeal squamous cell carcinoma, and salivary gland carcinoma.","definition_xrefs":["NCIT:C35850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"head and neck carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:1542","UMLS:C3887461","MEDGEN:854345"],"synonyms":[{"name":"carcinoma of craniocervical region","type":"exact"},{"name":"carcinoma of head and neck","type":"exact"},{"name":"carcinoma of neck","type":"exact"},{"name":"carcinoma of the head and neck","type":"exact"},{"name":"carcinoma of the neck","type":"narrow"},{"name":"craniocervical region carcinoma","type":"exact"},{"name":"head and neck cancer","type":"related"},{"name":"head and neck carcinoma","type":"exact"},{"name":"neck carcinoma","type":"exact"}],"termid":"MONDO:0002038","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002038"}}}


id: PBO:0071186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 27","termid":"PBO:0071186"}


id: FYPO:0003946
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121403],"is_not":false,"summary":null,"term":"FYPO:0003946"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_03596":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_01143"],"name":"delayed onset of protein localization to cell division site","references_by_uniquename":{"PMID:25866389":null},"synonyms":[{"name":"delayed onset of protein localisation to cell division site","type":"exact"},{"name":"delayed onset of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"delayed onset of protein recruitment to cell division site","type":"related"},{"name":"delayed protein localization to cell division site","type":"exact"}],"termid":"FYPO:0003946","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0003946":null}}


id: PBO:0074538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNCA antisense RNA 1","termid":"PBO:0074538"}


id: MONDO:0006298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extragonadal malignant germ cell tumor that arises from the mediastinum. This category includes seminoma, embryonal carcinoma, yolk sac tumor, choriocarcinoma, mixed germ cell tumors, and immature malignant teratoma.","definition_xrefs":["NCIT:C6446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"},{"relation_name":"is_a","term_name":"mediastinal cancer","termid":"MONDO:0005843"},{"relation_name":"is_a","term_name":"mediastinal germ cell tumor","termid":"MONDO:0021067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinal malignant germ cell tumor","secondary_identifiers":["SCTID:713293002","UMLS:C1334597","EFO:1000366","MEDGEN:277334"],"synonyms":[{"name":"malignant germ cell neoplasm of mediastinum","type":"related"},{"name":"malignant germ cell neoplasm of the mediastinum","type":"related"},{"name":"malignant germ cell tumor of mediastinum","type":"related"},{"name":"malignant germ cell tumor of the mediastinum","type":"related"},{"name":"malignant germ cell tumour of mediastinum","type":"related"},{"name":"malignant germ cell tumour of the mediastinum","type":"related"},{"name":"malignant mediastinal germ cell neoplasm","type":"related"},{"name":"malignant mediastinal germ cell tumor","type":"exact"},{"name":"malignant mediastinal germ cell tumour","type":"exact"},{"name":"mediastinal germ cell tumor, malignant","type":"exact"},{"name":"mediastinal malignant germ cell tumor","type":"exact"},{"name":"thymic malignant germ cell tumor","type":"exact"},{"name":"thymic malignant germ cell tumour","type":"exact"}],"termid":"MONDO:0006298","xrefs":{"Monarch":{"xref_id":"0006298"}}}


id: GO:0043438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetoacetic acid, 3-oxobutanoic acid; the empirical formula is C4H6O3 or CH3COCH2COOH.","definition_xrefs":["Wikipedia:Acetoacetic_acid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"},{"relation_name":"is_a","term_name":"ketone body metabolic process","termid":"GO:1902224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"acetoacetic acid metabolic process","synonyms":[{"name":"3-oxobutanoate metabolic process","type":"exact"},{"name":"3-oxobutanoate metabolism","type":"exact"},{"name":"3-oxobutanoic acid metabolic process","type":"exact"},{"name":"3-oxobutanoic acid metabolism","type":"exact"},{"name":"acetoacetate metabolic process","type":"exact"},{"name":"acetoacetate metabolism","type":"exact"},{"name":"acetoacetic acid metabolism","type":"exact"},{"name":"beta ketobutyric acid metabolic process","type":"exact"},{"name":"beta ketobutyric acid metabolism","type":"exact"},{"name":"beta-ketobutyric acid metabolic process","type":"exact"},{"name":"beta-ketobutyric acid metabolism","type":"exact"},{"name":"diacetic acid metabolic process","type":"exact"},{"name":"diacetic acid metabolism","type":"exact"}],"termid":"GO:0043438"}


id: PBO:0013745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3 (predicted)","termid":"PBO:0013745"}


id: PBO:0073709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Skint1 like (pseudogene)","termid":"PBO:0073709"}


id: PBO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress activated MAP kinase interacting protein Sin1","termid":"PBO:0002666"}


id: GO:2000371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA topoisomerase (ATP-hydrolyzing) activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA topoisomerase (ATP-hydrolyzing) activity (obsolete GO:2000371)","synonyms":[{"name":"regulation of DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"regulation of DNA topoisomerase II","type":"related"},{"name":"regulation of DNA topoisomerase IV activity","type":"exact"},{"name":"regulation of DNA topoisomerase type II activity","type":"exact"},{"name":"regulation of deoxyribonucleate topoisomerase","type":"related"},{"name":"regulation of deoxyribonucleic topoisomerase activity","type":"exact"},{"name":"regulation of topoisomerase","type":"related"},{"name":"regulation of topoisomerase II","type":"exact"},{"name":"regulation of type II DNA topoisomerase activity","type":"exact"}],"termid":"GO:2000371"}


id: PBO:0067535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 679, pseudogene","termid":"PBO:0067535"}


id: GO:0036172
data:
  {"annotated_genes":["SJAG_03362","SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101426,112421,112422],"is_not":false,"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"A process that generates thiamine (vitamin B1) from derivatives of it without de novo synthesis.","definition_xrefs":["PMID:15150256","PMID:16952958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"},{"relation_name":"is_a","term_name":"thiamine biosynthetic process","termid":"GO:0009228"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03362":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"thiamine salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036172","terms_by_termid":{"GO:0036172":null}}


id: PBO:0055070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2487","termid":"PBO:0055070"}


id: MONDO:0013021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoinflammatory disease caused by mutations in the IL1RN gene, which encodes the IL1 receptor antagonist. It presents in infancy, and is characterized by systemic inflammation, pustular rash, bone pain, sterile osteitis, and periostitis.","definition_xrefs":["NCIT:C119056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic recurrent multifocal osteomyelitis","termid":"MONDO:0009813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"sterile multifocal osteomyelitis with periostitis and pustulosis","secondary_identifiers":["NANDO:2200439","UMLS:C2748507","MEDGEN:411230","Orphanet:210115","GARD:10516","OMIM:612852","MESH:C557815"],"synonyms":[{"name":"DIRA","type":"exact"},{"name":"Interleukin 1 receptor antagonist deficiency","type":"related"},{"name":"Interleukin-1 receptor antagonist deficiency","type":"exact"},{"name":"OMPP","type":"exact"},{"name":"autoinflammatory disease due to interleukin-1 receptor antagonist deficiency","type":"exact"},{"name":"deficiency of interleukin-1 receptor antagonist","type":"related"},{"name":"deficiency of the Interleukin-1 receptor antagonist","type":"exact"},{"name":"osteomyelitis, STERILE multifocal, with periostitis and pustulosis","type":"related"}],"termid":"MONDO:0013021","xrefs":{"Monarch":{"xref_id":"0013021"}}}


id: PBO:0084445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltose permease; part of the complex locus MAL4","termid":"PBO:0084445"}


id: GO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitters into neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.","definition_xrefs":["ISBN:0123668387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transport","termid":"GO:0006836"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter uptake","secondary_identifiers":["Reactome:R-HSA-112313"],"synonyms":[{"name":"neurotransmitter import","type":"exact"},{"name":"neurotransmitter import into glial cell","type":"narrow"},{"name":"neurotransmitter import into neuron","type":"narrow"},{"name":"neurotransmitter recycling","type":"broad"}],"termid":"GO:0001504"}


id: PBO:0003659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SURF-family protein Shy1 (predicted)","termid":"PBO:0003659"}


id: GO:0042845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycol, a diol in which the two hydroxy groups are on different carbon atoms, usually but not necessarily adjacent.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycol biosynthetic process","synonyms":[{"name":"dihydric alcohol biosynthesis","type":"broad"},{"name":"dihydric alcohol biosynthetic process","type":"broad"},{"name":"glycol anabolism","type":"exact"},{"name":"glycol biosynthesis","type":"exact"},{"name":"glycol formation","type":"exact"},{"name":"glycol synthesis","type":"exact"}],"termid":"GO:0042845"}


id: GO:0060366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the lambdoid suture is generated and organized.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial suture morphogenesis","termid":"GO:0060363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lambdoid suture morphogenesis","termid":"GO:0060366"}


id: PBO:0028364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell","termid":"PBO:0028364"}


id: PBO:0047642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1B","termid":"PBO:0047642"}


id: PBO:0042549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 13","termid":"PBO:0042549"}


id: PBO:0004543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc4","termid":"PBO:0004543"}


id: FYPO:0001288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phospholipid measured in a cell is higher than normal. A phospholipid is any lipid containing phosphoric acid as a mono- or di-ester.","definition_xrefs":["CHEBI:16247","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered phospholipid level","termid":"FYPO:0001287"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased phospholipid level","synonyms":[{"name":"increased cellular phospholipid level","type":"exact"},{"name":"increased phospholipid accumulation","type":"related"},{"name":"increased phospholipid level during mitotic cell cycle","type":"related"},{"name":"increased phospholipid level during vegetative growth","type":"exact"}],"termid":"FYPO:0001288"}


id: PBO:0077717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 1 pseudogene 3","termid":"PBO:0077717"}


id: PBO:0057278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 500a","termid":"PBO:0057278"}


id: PBO:0053858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1128","termid":"PBO:0053858"}


id: PBO:0067947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 249","termid":"PBO:0067947"}


id: PBO:0026842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_swollen,_elongated_pear-shaped_cell","termid":"PBO:0026842"}


id: PBO:0005609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-fructofuranosidase","termid":"PBO:0005609"}


id: PBO:0073065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 3","termid":"PBO:0073065"}


id: PBO:0028868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snoRNA_level","termid":"PBO:0028868"}


id: PBO:0110258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex/Las1 complex polynucleotide 5'-hydroxyl-kinase Grc3","termid":"PBO:0110258"}


id: GO:0061155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tube are generated and organized from the pulmonary artery endothelium. An pulmonary artery endothelium is an epithelium that lines the pulmonary artery.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"},{"relation_name":"part_of","term_name":"pulmonary artery morphogenesis","termid":"GO:0061156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary artery endothelial tube morphogenesis","termid":"GO:0061155"}


id: PBO:0041557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 47","termid":"PBO:0041557"}


id: GO:0019518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) to form to form 2-amino-3-oxobutanoate, which is subsequently converted to glycine.","definition_xrefs":["GOC:mah","MetaCyc:THREONINE-DEG2-PWY","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"L-threonine catabolic process","termid":"GO:0006567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-threonine catabolic process to glycine","secondary_identifiers":["Reactome:R-HSA-8849175"],"synonyms":[{"name":"L-threonine breakdown to glycine","type":"exact"},{"name":"L-threonine catabolic process to pyruvate","type":"related"},{"name":"L-threonine catabolism to glycine","type":"exact"},{"name":"L-threonine degradation to glycine","type":"exact"},{"name":"threonine catabolic process to glycine","type":"broad"}],"termid":"GO:0019518"}


id: FYPO:0004047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains two nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"fragmented septum","termid":"FYPO:0004042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000032","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"binucleate vegetative cell with fragmented septum","synonyms":[{"name":"binucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"binucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004047"}


id: MONDO:0015548
data:
  {"annotated_genes":["SJAG_01317","SJAG_01229","SJAG_16459","SJAG_00421"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87294,87295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008695"},{"annotations":[87596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[89098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease and related disorders","termid":"MONDO:0000167"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_01229":null,"SJAG_01317":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Huntington disease-like syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:158266","SCTID:702376003","GARD:20029","MEDGEN:777988","UMLS:C3711380","ICD9:333.99","MESH:C580174"],"synonyms":[{"name":"Huntington disease phenocopy syndrome","type":"exact"}],"termid":"MONDO:0015548","terms_by_termid":{"MONDO:0008458":null,"MONDO:0008695":null,"MONDO:0011781":null},"xrefs":{"Monarch":{"xref_id":"0015548"}}}


id: PBO:0044293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC finger protein 1 pseudogene 1","termid":"PBO:0044293"}


id: PBO:0087619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Cop9 signalosome; Cop9 signalosome is required for deneddylation, or removal of the ubiquitin-like protein Rub1p from Cdc53p (cullin); involved in adaptation to pheromone signaling","termid":"PBO:0087619"}


id: MONDO:0007462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple sclerosis, susceptibility to","secondary_identifiers":["OMIMPS:126200","UMLS:C1868685","MEDGEN:358269"],"synonyms":[{"name":"MS","type":"related"},{"name":"disseminated sclerosis","type":"related"}],"termid":"MONDO:0007462","xrefs":{"Monarch":{"xref_id":"0007462"}}}


id: MONDO:0005434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The response of human skin to sun exposure.","definition_xrefs":["EFO:0004795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitivity disease","termid":"MONDO:0006597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin sensitivity to sun","secondary_identifiers":["UMLS:C0349506","MEDGEN:87601"],"termid":"MONDO:0005434","xrefs":{"Monarch":{"xref_id":"0005434"}}}


id: GO:0015133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of uronic acid from one side of a membrane to the other. Uronic acids are any monocarboxylic acid formally derived by oxidizing to a carboxyl group the terminal hydroxymethylene group of either an aldose with four or more carbon atoms in the molecule, or of any glycoside derived from such an aldose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"uronic acid transmembrane transporter activity","termid":"GO:0015133"}


id: PBO:0051702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase B","termid":"PBO:0051702"}


id: PBO:0078993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 1-3","termid":"PBO:0078993"}


id: PBO:0053016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 4","termid":"PBO:0053016"}


id: PBO:0030457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nickel_import","termid":"PBO:0030457"}


id: MOD:00222
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 2'-alpha-mannosyl-L-tryptophan.","definition_xrefs":["Unimod:41#W","PubMed:7947762","PubMed:15279557","PubMed:7547911","RESID:AA0217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-glycosylated residue","termid":"MOD:00421"},{"relation_name":"is_a","term_name":"mannosylated residue","termid":"MOD:00595"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"2'-alpha-mannosyl-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(2-beta-D-mannopyranosyl-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2'-mannosyl-L-tryptophan","type":"exact"},{"name":"2'-tryptophan C-mannoside","type":"exact"},{"name":"C2'ManTrp","type":"exact"},{"name":"CARBOHYD C-linked (Man) tryptophan","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"}],"termid":"MOD:00222"}


id: PBO:0083185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the Ty2 LTR YBLWdelta2; YBL107W-A has a paralog, YER138W-A, that arose from a single-locus duplication","termid":"PBO:0083185"}


id: PBO:0005301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy and CVT pathway serine/threonine protein kinase Atg1","termid":"PBO:0005301"}


id: PBO:0089490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer epsilon subunit","termid":"PBO:0089490"}


id: GO:0015032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of hemolymph proteins by cells of the fat body of holometabolous insects, during the final larval stage. Uptake of these proteins prepares the insect for pupation and metamorphosis, since insect pupae do not feed and therefore depend on material that has been accumulated during larval life.","definition_xrefs":["GOC:bf","PMID:10231363"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein import into fat body (obsolete GO:0015032)","synonyms":[{"name":"fat body metabolic process","type":"broad"},{"name":"fat body metabolism","type":"broad"},{"name":"fat body storage protein uptake","type":"exact"},{"name":"import of storage protein into fat body","type":"exact"},{"name":"storage protein import by fat body cells","type":"exact"},{"name":"storage protein import into fat body cells","type":"exact"},{"name":"storage protein transport into fat body cells","type":"exact"},{"name":"storage protein uptake into fat body cells","type":"exact"}],"termid":"GO:0015032"}


id: GO:0004731
data:
  {"annotated_genes":["SJAG_01359","SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80923],"is_not":false,"summary":null,"term":"GO:0004731"},{"annotations":[79601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017061"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01359":null,"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"purine-nucleoside phosphorylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9755044","Reactome:R-HSA-9735775","RHEA:19805","Reactome:R-HSA-112033","Reactome:R-HSA-9735789","Reactome:R-HSA-74249","MetaCyc:PNP-RXN","Reactome:R-HSA-74242","Reactome:R-HSA-112034"],"synonyms":[{"name":"PNPase activity","type":"related"},{"name":"PUNPI","type":"related"},{"name":"PUNPII","type":"related"},{"name":"inosine phosphorylase activity","type":"narrow"},{"name":"inosine-guanosine phosphorylase activity","type":"related"},{"name":"purine deoxynucleoside phosphorylase activity","type":"related"},{"name":"purine deoxyribonucleoside phosphorylase activity","type":"related"},{"name":"purine nucleoside phosphorylase activity","type":"related"},{"name":"purine ribonucleoside phosphorylase activity","type":"related"},{"name":"purine-nucleoside:phosphate ribosyltransferase activity","type":"related"}],"termid":"GO:0004731","terms_by_termid":{"GO:0004731":null,"GO:0017061":null}}


id: PBO:0000262
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.4.1","termid":"PBO:0000262"}


id: PBO:0070873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 4","termid":"PBO:0070873"}


id: FYPO:0004514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype in which a cell has no septum, is elongated, and is viable.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable elongated aseptate vegetative cell (obsolete FYPO:0004514)","synonyms":[{"name":"viable elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"viable elongated aseptate cell during vegetative growth","type":"exact"},{"name":"viable long aseptate cell","type":"exact"}],"termid":"FYPO:0004514"}


id: PBO:0064893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B''beta","termid":"PBO:0064893"}


id: GO:0071202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP10 associated with the channel via interaction with the Kv alpha subunit 4.3.","definition_xrefs":["PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Kv4.3-DPP10 channel complex","secondary_identifiers":["CORUM:598"],"synonyms":[{"name":"Kv4.3-DPPY channel complex","type":"exact"}],"termid":"GO:0071202"}


id: PBO:0089963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator Ncb2","termid":"PBO:0089963"}


id: PBO:0028484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity","termid":"PBO:0028484"}


id: PBO:0046214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 7","termid":"PBO:0046214"}


id: PBO:0041183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 3","termid":"PBO:0041183"}


id: MONDO:1010424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autism spectrum disorder that occurs in zebra finch.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"autism spectrum disorder, non-human animal","termid":"MONDO:1010005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism spectrum disorder, zebra finch","secondary_identifiers":["OMIA:001815-59729"],"termid":"MONDO:1010424","xrefs":{"Monarch":{"xref_id":"1010424"}}}


id: GO:1904575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of selenocysteine insertion sequence binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:19716792"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of selenocysteine insertion sequence binding (obsolete GO:1904575)","synonyms":[{"name":"activation of SECIS binding","type":"narrow"},{"name":"activation of selenocysteine insertion sequence binding","type":"narrow"},{"name":"positive regulation of SECIS binding","type":"exact"},{"name":"up regulation of SECIS binding","type":"exact"},{"name":"up regulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"up-regulation of SECIS binding","type":"exact"},{"name":"up-regulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"upregulation of SECIS binding","type":"exact"},{"name":"upregulation of selenocysteine insertion sequence binding","type":"exact"}],"termid":"GO:1904575"}


id: MONDO:0015472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cryptococcosis (obsolete MONDO:0015472)","termid":"MONDO:0015472","xrefs":{"Monarch":{"xref_id":"0015472"}}}


id: PBO:0077360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 100","termid":"PBO:0077360"}


id: FYPO:0009060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of wortmannin than normal.","definition_xrefs":["PMID:26891792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to wortmannin","synonyms":[{"name":"resistance to wortmannin during vegetative growth","type":"exact"},{"name":"resistant to wortmannin","type":"exact"}],"termid":"FYPO:0009060"}


id: GO:0032599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein out of a membrane raft. Membrane rafts are small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport within lipid bilayer","termid":"GO:0032594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein transport out of membrane raft","synonyms":[{"name":"protein translocation out of membrane raft","type":"exact"},{"name":"protein transport out of lipid raft","type":"exact"},{"name":"receptor translocation out of membrane raft","type":"narrow"},{"name":"receptor transport out of membrane raft","type":"narrow"}],"termid":"GO:0032599"}


id: PBO:0086995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reticulon protein; involved in nuclear pore assembly and maintenance of tubular ER morphology; promotes membrane curvature; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; interacts with Sec6p, Yip3p, and Sbh1p; less abundant than RTN1; member of RTNLA (reticulon-like A) subfamily; protein increases in abundance and relocalizes to plasma membrane upon DNA replication stress","termid":"PBO:0086995"}


id: PBO:0091875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally silent transcript from pho1 locus","termid":"PBO:0091875"}


id: GO:0070217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a transcription factor TFIIIB complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"transcription factor TFIIIB complex assembly","synonyms":[{"name":"TFIIIB assembly","type":"exact"}],"termid":"GO:0070217"}


id: PBO:0031110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_stress","termid":"PBO:0031110"}


id: MONDO:0008427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid exchange, frequency of","secondary_identifiers":["OMIM:182220","UMLS:C1866942","MEDGEN:357877"],"synonyms":[{"name":"SCE, frequency of","type":"related"},{"name":"sister chromatid exchange, frequency of","type":"exact"}],"termid":"MONDO:0008427","xrefs":{"Monarch":{"xref_id":"0008427"}}}


id: PR:P31411
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P31411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.05c","synonyms":[{"name":"Spom972h-vma2","type":"exact"},{"name":"V-ATPase 57 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P31411"}


id: PBO:0071874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 12","termid":"PBO:0071874"}


id: PBO:0002080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal protein binding protein Sla1 family, Shd1 (predicted)","termid":"PBO:0002080"}


id: MONDO:0800154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of amino acid metabolism that has its basis in the disruption of the metabolism of sulfur-containing amino acids and/or hydrogen sulfide.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"inborn disorder of the metabolism of sulfur-containing amino acids and hydrogen sulfide","termid":"MONDO:0800154","xrefs":{"Monarch":{"xref_id":"0800154"}}}


id: MONDO:0002819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Loeffler endocarditis (obsolete MONDO:0002819)","termid":"MONDO:0002819","xrefs":{"Monarch":{"xref_id":"0002819"}}}


id: GO:0051770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric oxide synthase enzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nitric-oxide synthase biosynthetic process (obsolete GO:0051770)","synonyms":[{"name":"activation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"activation of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"positive regulation of NO synthase biosynthesis","type":"exact"},{"name":"positive regulation of NO synthase biosynthetic process","type":"exact"},{"name":"positive regulation of NOS biosynthesis","type":"exact"},{"name":"positive regulation of NOS biosynthetic process","type":"exact"},{"name":"positive regulation of NOS2 synthase biosynthesis","type":"narrow"},{"name":"positive regulation of NOS2 synthase biosynthetic process","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"stimulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"stimulation of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"up regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"up regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"up-regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"up-regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"upregulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"upregulation of nitric-oxide synthase biosynthetic process","type":"exact"}],"termid":"GO:0051770"}


id: PR:O60103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase MARCH6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04016","PANTHER:PTHR13145:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD-associated E3 ubiquitin-protein ligase doa10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.07","secondary_identifiers":["UniProtKB:O60103"],"synonyms":[{"name":"Spom972h-MARCH6","type":"exact"}],"termid":"PR:O60103"}


id: MONDO:0011958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bile and pancreatic ducts, complete absence of","secondary_identifiers":["MESH:C564298","MEDGEN:374974","OMIM:608063","UMLS:C1842614"],"synonyms":[{"name":"bile and pancreatic ducts, complete absence of","type":"exact"}],"termid":"MONDO:0011958","xrefs":{"Monarch":{"xref_id":"0011958"}}}


id: GO:0047540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoate + NAD+ = 2-butenoate + NADH + H+.","definition_xrefs":["EC:1.3.1.31","MetaCyc:2-ENOATE-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-enoate reductase activity","secondary_identifiers":["RHEA:10200"],"synonyms":[{"name":"butanoate:NAD+ delta2-oxidoreductase activity","type":"related"},{"name":"enoate reductase activity","type":"related"}],"termid":"GO:0047540"}


id: PBO:0068538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 141, pseudogene","termid":"PBO:0068538"}


id: PBO:0042069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC137 pseudogene 2","termid":"PBO:0042069"}


id: MONDO:0011770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 2","secondary_identifiers":["OMIM:607087","UMLS:C1846837","MESH:C564627","MEDGEN:335538","GARD:15409"],"synonyms":[{"name":"AAT2","type":"related"},{"name":"FAA2","type":"related"},{"name":"aortic aneurysm, familial thoracic 2","type":"exact"}],"termid":"MONDO:0011770","xrefs":{"Monarch":{"xref_id":"0011770"}}}


id: GO:0031402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sodium ion (Na+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkali metal ion binding","termid":"GO:0031420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"sodium ion binding","synonyms":[{"name":"Na+ ion binding","type":"exact"}],"termid":"GO:0031402"}


id: GO:0098822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-L-cysteine persulfide.","definition_xrefs":["PMID:11592406"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine modification to L-cysteine persulfide (obsolete GO:0098822)","termid":"GO:0098822"}


id: GO:0033537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ajugose, the hexasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside, by a pathway in which galactinol:raffinose galactosyltransferase catalyzes chain elongation by transferring the alpha-galactosyl residue of galactinol to the oligosaccharide.","definition_xrefs":["MetaCyc:PWY-5342","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ajugose biosynthetic process","termid":"GO:0033536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"ajugose biosynthetic process using galactinol:raffinose galactosyltransferase","synonyms":[{"name":"ajugose anabolism using galactinol:raffinose galactosyltransferase","type":"exact"},{"name":"ajugose biosynthesis using galactinol:raffinose galactosyltransferase","type":"exact"},{"name":"ajugose formation using galactinol:raffinose galactosyltransferase","type":"exact"},{"name":"ajugose synthesis using galactinol:raffinose galactosyltransferase","type":"exact"}],"termid":"GO:0033537"}


id: PBO:0052237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9 pseudogene 5","termid":"PBO:0052237"}


id: GO:0097036
data:
  {"annotated_genes":["SJAG_00870","SJAG_00261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73718,103114],"is_not":false,"summary":null,"term":"GO:0097036"}]},"cv_name":"biological_process","definition":"Any process that modulates the proportions or spatial arrangement of sterols in the plasma membrane.","definition_xrefs":["PMID:20823909","GOC:mah","PMID:18441123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"regulation of membrane lipid distribution","termid":"GO:0097035"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of plasma membrane sterol distribution","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0097036","terms_by_termid":{"GO:0097036":null}}


id: PBO:0075090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 140","termid":"PBO:0075090"}


id: PBO:0041020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 3","termid":"PBO:0041020"}


id: PBO:0001252
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion solves arginine-conversion problem","termid":"PBO:0001252"}


id: PR:P33277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gap1 gene.","definition_xrefs":["UniProtKB:P33277","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.12c","synonyms":[{"name":"Spom972h-gap1","type":"exact"},{"name":"ras GTPase-activating protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P33277"}


id: GO:0072692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Repression of transcription of DNA at the central core of a regional centromere by altering the structure of chromatin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin silencing at centromere central core (obsolete GO:0072692)","synonyms":[{"name":"centromere central core chromatin silencing","type":"exact"},{"name":"chromatin silencing at centromeric central core","type":"exact"},{"name":"chromatin silencing at chromosome kinetochore domain","type":"exact"},{"name":"heterochromatic silencing at centromere central core","type":"exact"}],"termid":"GO:0072692"}


id: MONDO:0013256
data:
  {"annotated_genes":["SJAG_01804","SJAG_00441","SJAG_02846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87990,87991,87992],"is_not":false,"summary":null,"term":"MONDO:0013256"}]},"cv_name":"mondo","definition":"15q24 microdeletion syndrome is a rare chromosomal anomaly characterized cytogenetically by a 1.7-6.1 Mb deletion in chromosome 15q24 and clinically by pre- and post-natal growth retardation, intellectual disability, distinct facial features, and genital, skeletal, and digital anomalies.","definition_xrefs":["Orphanet:94065"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_01804":null,"SJAG_02846":null},"genotype_count":0,"is_obsolete":false,"name":"chromosome 15q24 deletion syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3150674","MESH:C579849","DECIPHER:66","DOID:0060395","MEDGEN:462024","GARD:12219","OMIM:613406","SCTID:699308002"],"synonyms":[{"name":"15q24 microdeletion syndrome","type":"exact"},{"name":"15q24 recurrent microdeletion syndrome","type":"exact"},{"name":"Del(15)(q24)","type":"exact"},{"name":"WITKOS","type":"related"},{"name":"Witteveen-Kolk syndrome","type":"related"},{"name":"chromosome 15Q24 Duplication syndrome","type":"related"},{"name":"chromosome 15q24 deletion syndrome","type":"exact"},{"name":"monosomy 15q24","type":"exact"}],"termid":"MONDO:0013256","terms_by_termid":{"MONDO:0013256":null},"xrefs":{"Monarch":{"xref_id":"0013256"}}}


id: GO:0060734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of eIF2 alpha phosphorylation as a cellular response to endoplasmic reticulum stress.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"regulates","term_name":"eiF2alpha phosphorylation in response to endoplasmic reticulum stress","termid":"GO:0036492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation","synonyms":[{"name":"regulation of ER stress-induced eIF2 alpha phosphorylation","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by ER stress","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0060734"}


id: PR:Q9P783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate-rich WD repeat-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein rrb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.07","secondary_identifiers":["UniProtKB:Q9P783"],"synonyms":[{"name":"Spom972h-GRWD1","type":"exact"}],"termid":"PR:Q9P783"}


id: PBO:0005245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L2 (predicted)","termid":"PBO:0005245"}


id: PBO:0018121
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vam7-like protein","termid":"PBO:0018121"}


id: MONDO:0700284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carnitine cycle and carnitine transport","termid":"MONDO:0017716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"carnitine palmitoyl transferase deficiency","termid":"MONDO:0700284","xrefs":{"Monarch":{"xref_id":"0700284"}}}


id: PBO:0031184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division","termid":"PBO:0031184"}


id: MONDO:0014186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the ARL2BP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa with or without situs inversus","secondary_identifiers":["MEDGEN:1658130","DOID:0110419","UMLS:C4747737","ICD10CM:H35.5","GARD:15965","OMIM:615434"],"synonyms":[{"name":"ARL2BP retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in ARL2BP","type":"exact"},{"name":"retinitis pigmentosa with or without situs inversus","type":"exact"}],"termid":"MONDO:0014186","xrefs":{"Monarch":{"xref_id":"0014186"}}}


id: PBO:0042628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 3 pseudogene","termid":"PBO:0042628"}


id: FYPO:0005614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to bleomycin","synonyms":[{"name":"normal protein phosphorylation during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to bleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0005614"}


id: MONDO:0010760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete XH antigen (obsolete MONDO:0010760)","termid":"MONDO:0010760","xrefs":{"Monarch":{"xref_id":"0010760"}}}


id: PBO:0069946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1239, pseudogene","termid":"PBO:0069946"}


id: PBO:0058107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4322","termid":"PBO:0058107"}


id: PBO:0028148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_box_C/D_snoRNA_3'-end_processing","termid":"PBO:0028148"}


id: PATO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000135 relative_angle (obsolete PATO:0000135)","termid":"PATO:0000135"}


id: MONDO:0003241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the brain and spinal cord.","definition_xrefs":["NCIT:C7004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system hemangioma","secondary_identifiers":["UMLS:C1333957","DOID:501","MEDGEN:272703"],"synonyms":[{"name":"central nervous system hemangioma","type":"exact"},{"name":"hemangioma of CNS","type":"exact"},{"name":"hemangioma of central nervous system","type":"exact"},{"name":"hemangioma of the CNS","type":"exact"},{"name":"hemangioma of the central nervous system","type":"exact"}],"termid":"MONDO:0003241","xrefs":{"Monarch":{"xref_id":"0003241"}}}


id: FYPO:0005520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nucleosome-dependent ATPase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal nucleosome-dependent ATPase activity","termid":"FYPO:0005519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abolished nucleosome-dependent ATPase activity","synonyms":[{"name":"nucleosome-dependent ATPase activity abolished","type":"exact"}],"termid":"FYPO:0005520"}


id: MONDO:0024482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hamartoma characterized by localized eccrine sweat gland malformation.","definition_xrefs":["NCIT:C5564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine sweat gland neoplasm","termid":"MONDO:0002090"},{"relation_name":"is_a","term_name":"hamartoma of skin appendage","termid":"MONDO:0021539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"eccrine sweat gland hamartoma","secondary_identifiers":["MEDGEN:232145","UMLS:C1333372"],"synonyms":[{"name":"eccrine sweat gland hamartoma","type":"exact"},{"name":"eccrine sweat gland hamartoma (disease)","type":"exact"},{"name":"hamartoma of eccrine sweat gland","type":"exact"},{"name":"hamartoma of the eccrine sweat gland","type":"exact"}],"termid":"MONDO:0024482","xrefs":{"Monarch":{"xref_id":"0024482"}}}


id: GO:0140031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon phosphorylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphorylation-dependent protein binding","termid":"GO:0140031"}


id: GO:0062179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-23 of any form of vitamin D.","definition_xrefs":["PMID:30205156","PMID:22100522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}


id: FYPO:0001882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of one or more enzymes that degrades cell wall polysaccharides than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to cell wall-degrading enzymes","synonyms":[{"name":"resistance to Lyticase","type":"narrow"},{"name":"resistance to Novozyme 234","type":"narrow"},{"name":"resistance to Zymolyase","type":"narrow"},{"name":"resistance to cell wall-degrading enzymes during mitotic cell cycle","type":"related"},{"name":"resistance to cell wall-degrading enzymes during vegetative growth","type":"exact"},{"name":"resistant to cell wall-degrading enzymes","type":"exact"}],"termid":"FYPO:0001882"}


id: FYPO:0006504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell forms two or more shmoos, usually in succession, without fusing with a partner cell. Cell fusion may or may not subsequently occur.","definition_xrefs":["PMID:29453312","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000301","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"multiple shmoo formation","synonyms":[{"name":"formation of multiple mating projections","type":"exact"},{"name":"formation of multiple shmoos","type":"exact"},{"name":"multiple mating projection assembly","type":"exact"}],"termid":"FYPO:0006504"}


id: FYPO:0006863
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after exposure to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability following cellular response to bleomycin","synonyms":[{"name":"decreased viability following cellular response to bleomycin","type":"exact"},{"name":"loss of cell population viability following cellular response to bleomycin","type":"exact"},{"name":"loss of viability following bleomycin exposure","type":"exact"},{"name":"reduced viability following cellular response to bleomycin","type":"related"}],"termid":"FYPO:0006863"}


id: MONDO:0003211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the nasal cavity","direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity carcinoma","termid":"MONDO:0003212"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity adenocarcinoma","secondary_identifiers":["DOID:4930","NCIT:C6015","MEDGEN:233746","UMLS:C1334920"],"synonyms":[{"name":"adenocarcinoma of nasal cavity","type":"exact"},{"name":"adenocarcinoma of the nasal cavity","type":"exact"},{"name":"nasal cavity adenocarcinoma","type":"exact"}],"termid":"MONDO:0003211","xrefs":{"Monarch":{"xref_id":"0003211"}}}


id: GO:0046223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aflatoxin, a fungal metabolite found as a contaminant in moldy grains that induces liver cancer. Aflatoxin induces a G to T transversion at codon 249 of p53, leading to its inactivation. Aflatoxin is converted to a chemical carcinogen by P450.","definition_xrefs":["GOC:ai","PMID:20807200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin catabolic process","termid":"GO:0043387"},{"relation_name":"is_a","term_name":"aflatoxin metabolic process","termid":"GO:0046222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"aflatoxin catabolic process","synonyms":[{"name":"aflatoxin breakdown","type":"exact"},{"name":"aflatoxin catabolism","type":"exact"},{"name":"aflatoxin degradation","type":"exact"}],"termid":"GO:0046223"}


id: MONDO:0008966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cholestasis-lymphedema syndrome is a rare genetic disorder characterized by neonatal intrahepatic cholestasis, often lessening and becoming intermittent with age, and severe chronic lymphedema which mainly affects the lower limbs. Patients often present with fat malabsorption leading to failure to thrive, fat soluble vitamin deficiency with bleeding, rickets, and neuropathy. In 25% of cases, cirrhosis occurs during childhood or later in life.","definition_xrefs":["Orphanet:1414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046","MONDO:0002515"],"is_obsolete":false,"name":"Aagenaes syndrome","secondary_identifiers":["GARD:370","DOID:6691","ICD10CM:Q82.0","NCIT:C35709","UMLS:C0268314","MEDGEN:78658","MESH:C535330","ICD9:576.8","SCTID:28724005","OMIM:214900"],"synonyms":[{"name":"Aagenaes syndrome","type":"exact"},{"name":"Chls","type":"related"},{"name":"LCS","type":"related"},{"name":"LCS1","type":"related"},{"name":"cholestasis lymphedema syndrome","type":"related"},{"name":"cholestasis-edema syndrome, Norwegian type","type":"exact"},{"name":"cholestasis-lymphedema syndrome","type":"related"},{"name":"lymphedema cholestasis syndrome","type":"related"},{"name":"lymphedema-cholestasis syndrome","type":"related"}],"termid":"MONDO:0008966","xrefs":{"Monarch":{"xref_id":"0008966"}}}


id: PBO:0042563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 5","termid":"PBO:0042563"}


id: SO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pyrimidine rich sequence near the 3' end of an intron to which the 5'end becomes covalently bound during nuclear splicing. The resulting structure resembles a lariat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branch_site","synonyms":[{"name":"branch point","type":"exact"},{"name":"branch site","type":"exact"},{"name":"branch_point","type":"exact"}],"termid":"SO:0000611"}


id: MONDO:0015862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete embryonal carcinoma (obsolete MONDO:0015862)","termid":"MONDO:0015862","xrefs":{"Monarch":{"xref_id":"0015862"}}}


id: MONDO:0014118
data:
  {"annotated_genes":["SJAG_03889"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86872],"is_not":false,"summary":null,"term":"MONDO:0014118"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive severe congenital neutropenia","termid":"MONDO:0028226"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025","MONDO:0005570"],"is_obsolete":false,"name":"congenital neutropenia-myelofibrosis-nephromegaly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:815361","DOID:0112132","OMIM:615285","GARD:17585","Orphanet:369852","UMLS:C3809031"],"synonyms":[{"name":"SCN5","type":"related"},{"name":"congenital neutropenia-bone marrow fibrosis-nephromegaly syndrome","type":"exact"},{"name":"neutropenia, severe congenital, 5, autosomal recessive","type":"related"},{"name":"vps45 deficiency","type":"exact"}],"termid":"MONDO:0014118","terms_by_termid":{"MONDO:0014118":null},"xrefs":{"Monarch":{"xref_id":"0014118"}}}


id: PBO:0017922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transmembrane transporter (predicted)","termid":"PBO:0017922"}


id: FYPO:0001393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of cell growth","termid":"FYPO:0001392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal activation of monopolar cell growth","synonyms":[{"name":"abnormal regulation of monopolar vegetative cell growth","type":"related"}],"termid":"FYPO:0001393"}


id: GO:0061724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective degradation of lipid droplets by macroautophagy.","definition_xrefs":["PMID:26076903","GOC:autophagy","PMID:23708524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"lipophagy","secondary_identifiers":["Reactome:R-HSA-9613354"],"termid":"GO:0061724"}


id: PBO:0031681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peroxisome_degradation","termid":"PBO:0031681"}


id: GO:0003694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with a plasmid, an extrachromosomal genetic element usually characterized as a covalently continuous double stranded DNA molecule found in bacteria and some other microorganisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete plasmid binding (obsolete GO:0003694)","synonyms":[{"name":"plasmid binding","type":"exact"},{"name":"plasmid-associated protein","type":"related"}],"termid":"GO:0003694"}


id: PBO:0061449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 4 group A member 1","termid":"PBO:0061449"}


id: PBO:0091657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane hexose:proton symporter, unknown specificity Ght4","termid":"PBO:0091657"}


id: GO:0034099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes ERAD-luminal misfolded substrates and brings them to the ubiquitination/extraction machinery. In yeast, this complex consists of Yos9p, Kar2p and Hrd3p proteins.","definition_xrefs":["PMID:16873065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"luminal surveillance complex","termid":"GO:0034099"}


id: GO:0006826
data:
  {"annotated_genes":["SJAG_03667","SJAG_02735","SJAG_04675","SJAG_01007","SJAG_04737","SJAG_02473","SJAG_02968","SJAG_04867","SJAG_04743","SJAG_02457","SJAG_04677","SJAG_04260","SJAG_02834"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033212"},{"annotations":[72025,99973,115785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[115202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[77540,79726,62181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[91117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[79510,94310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[71070,62567,62895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"The directed movement of iron (Fe) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02968":null,"SJAG_03667":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04737":null,"SJAG_04743":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"iron ion transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0015682","GO:0015684","GO:0033216","GO:0015681","GO:0097286"],"synonyms":[{"name":"ferric ion import","type":"narrow"},{"name":"ferric ion transport","type":"narrow"},{"name":"ferric iron import","type":"narrow"},{"name":"ferric iron transport","type":"narrow"},{"name":"ferric iron uptake","type":"narrow"},{"name":"ferrous ion transport","type":"narrow"},{"name":"ferrous iron transport","type":"narrow"},{"name":"iron ion import","type":"related"},{"name":"iron transport","type":"exact"}],"termid":"GO:0006826","terms_by_termid":{"GO:0033212":null,"GO:0033214":null,"GO:0033215":null,"GO:0034755":null,"GO:0048250":null,"GO:0098711":null,"GO:0140466":null}}


id: GO:0022884
data:
  {"annotated_genes":["SJAG_04996","SJAG_00959","SJAG_03415","SJAG_01879","SJAG_05259","SJAG_02208","SJAG_02330","SJAG_03560","SJAG_03502","SJAG_02077","SJAG_01640","SJAG_00373","SJAG_03358","SJAG_04218","SJAG_03515"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69341,108122,74990,75754,80776,80957,76780,80557,75208,75399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008320"},{"annotations":[109522,109545,105206,113782,107130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a macromolecule from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_00959":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"macromolecule transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0022884","terms_by_termid":{"GO:0008320":null,"GO:0015450":null}}


id: PBO:0077775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM40 pseudogene 2","termid":"PBO:0077775"}


id: GO:0045309
data:
  {"annotated_genes":["SJAG_04933","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74301,79994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated amino acid residue within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein binding","termid":"GO:0051219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein phosphorylated amino acid binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoprotein amino acid binding","type":"related"}],"termid":"GO:0045309","terms_by_termid":{"GO:1990269":null}}


id: GO:0031668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to extracellular stimulus (obsolete GO:0031668)","termid":"GO:0031668"}


id: MONDO:0003729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infiltration of the skin and subcutaneous tissue by leukemic cells without evidence of leukemia in the bone marrow and peripheral blood. It results in clinically identifiable skin lesions. It may be the first manifestation of acute leukemia, preceding the involvement of the bone marrow and peripheral blood by the leukemic process.","definition_xrefs":["NCIT:C4983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aleukemic leukemia","termid":"MONDO:0003730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"aleukemic leukemia cutis","secondary_identifiers":["UMLS:C0887846","DOID:6003","MEDGEN:168394"],"synonyms":[{"name":"aleukemic leukemia cutis","type":"exact"},{"name":"leukaemia subleukemic","type":"related"},{"name":"leukemia subleukemic","type":"related"}],"termid":"MONDO:0003729","xrefs":{"Monarch":{"xref_id":"0003729"}}}


id: PBO:0040171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNS pseudogene 2","termid":"PBO:0040171"}


id: GO:0120227
data:
  {"annotated_genes":["SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"}]},"cv_name":"molecular_function","definition":"Binding to an acyl-CoA, a thioester that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any carboxylic acid.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"nucleoside phosphate binding","termid":"GO:1901265"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"acyl-CoA binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"acyl binding","type":"broad"},{"name":"acyl-coenzyme A binding","type":"exact"}],"termid":"GO:0120227","terms_by_termid":{"GO:0036042":null}}


id: GO:1990248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of DNA damage.","definition_xrefs":["PMID:15660129"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to DNA damage (obsolete GO:1990248)","termid":"GO:1990248"}


id: GO:0010778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA repair synthesis","termid":"GO:0000711"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0007049","GO:0006310","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"meiotic DNA repair synthesis involved in reciprocal meiotic recombination","termid":"GO:0010778"}


id: SO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of insertion where the inserted sequence is a mobile element.","definition_xrefs":["EBI:dvga"],"direct_ancestors":[{"relation_name":"contains","term_name":"mobile_genetic_element","termid":"SO:0001037"},{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_element_insertion","synonyms":[{"name":"mobile element insertion","type":"exact"}],"termid":"SO:0001837"}


id: MOD:00963
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from DeltaMass. OBSOLETE because redundant and identical to MOD:00462. Remap to MOD:00462.","definition_xrefs":["DeltaMass:357"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00963 Oxidation of Trp to kynurenine (obsolete MOD:00963)","termid":"MOD:00963"}


id: GO:1905415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:bf","GOC:TermGenie","PMID:18468511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion-dependent exocytosis","termid":"GO:0045956"},{"relation_name":"is_a","term_name":"regulation of dense core granule exocytosis","termid":"GO:1905413"},{"relation_name":"positively_regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of dense core granule exocytosis","synonyms":[{"name":"activation of dense core granule exocytosis","type":"narrow"},{"name":"activation of dense core vesicle exocytosis","type":"narrow"},{"name":"positive regulation of dense core vesicle exocytosis","type":"exact"},{"name":"up regulation of dense core granule exocytosis","type":"exact"},{"name":"up regulation of dense core vesicle exocytosis","type":"exact"},{"name":"up-regulation of dense core granule exocytosis","type":"exact"},{"name":"up-regulation of dense core vesicle exocytosis","type":"exact"},{"name":"upregulation of dense core granule exocytosis","type":"exact"},{"name":"upregulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905415"}


id: PBO:0027077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_high-affinity_glucose_import","termid":"PBO:0027077"}


id: GO:0007166
data:
  {"annotated_genes":["SJAG_02823","SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107469,110405],"is_not":false,"summary":null,"term":"GO:0007166"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor located on the cell surface. The pathway ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02258":null,"SJAG_02823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell surface receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73887"],"synonyms":[{"name":"cell surface receptor linked signal transduction","type":"exact"},{"name":"cell surface receptor linked signaling pathway","type":"exact"},{"name":"cell surface receptor linked signalling pathway","type":"exact"}],"termid":"GO:0007166","terms_by_termid":{"GO:0007166":null}}


id: GO:0098672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the CRISPR-cas system of its host. Bacteria and archaea use CRISPR-Cas adaptive immune systems to defend themselves from infection by bacteriophages (phages), and phages have various mechanisms to counter the CRISPR-cas system.","definition_xrefs":["PMID:28749735","PMID:23242138","PMID:23446421","PMID:26416740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host CRISPR-cas system","secondary_identifiers":["VZ:3962"],"synonyms":[{"name":"CRISPR-cas system evasion by virus","type":"exact"},{"name":"anti-CRISPR","type":"broad"},{"name":"evasion by virus of CRISPR-cas system","type":"related"},{"name":"inhibition of host CRISPR-cas system by virus","type":"related"},{"name":"suppression of host CRISPR-cas system","type":"exact"}],"termid":"GO:0098672"}


id: PBO:0031767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_antimycin_A","termid":"PBO:0031767"}


id: GO:0046256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4,6-trinitrotoluene metabolic process","termid":"GO:0018974"},{"relation_name":"is_a","term_name":"trinitrotoluene catabolic process","termid":"GO:0046260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,4,6-trinitrotoluene catabolic process","synonyms":[{"name":"2,4,6-trinitrotoluene breakdown","type":"exact"},{"name":"2,4,6-trinitrotoluene catabolism","type":"exact"},{"name":"2,4,6-trinitrotoluene degradation","type":"exact"}],"termid":"GO:0046256"}


id: GO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8 S rRNA, 2S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of LSU-rRNA","termid":"GO:0000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000473"}


id: GO:0043499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a eukaryotic cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete eukaryotic cell surface binding (obsolete GO:0043499)","synonyms":[{"name":"eukaryotic cell surface binding","type":"exact"}],"termid":"GO:0043499"}


id: PBO:0002790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipin Ned1","termid":"PBO:0002790"}


id: FYPO:0001709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal iron-sulfur cluster binding","synonyms":[{"name":"abnormal iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0001709"}


id: PBO:0015711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external invertase, beta-fructofuranosidase","termid":"PBO:0015711"}


id: PBO:0073045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 3","termid":"PBO:0073045"}


id: GO:1903152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any copper ion transmembrane transporter activity that is involved in copper ion import into cell.","definition_xrefs":["GOC:dos","GOC:TermGenie","GO_REF:0000061","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion transmembrane transporter activity involved in copper ion import into cell (obsolete GO:1903152)","synonyms":[{"name":"copper ion transmembrane transporter activity involved in copper cation import into cell","type":"exact"},{"name":"copper ion transmembrane transporter activity involved in copper ion import into cell","type":"exact"},{"name":"intracellular copper ion transporter involved in copper cation import into cell","type":"narrow"},{"name":"intracellular copper ion transporter involved in copper ion import into cell","type":"narrow"},{"name":"plasma membrane copper transporter involved in copper cation import into cell","type":"narrow"},{"name":"plasma membrane copper transporter involved in copper ion import into cell","type":"narrow"}],"termid":"GO:1903152"}


id: GO:2001056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cysteine-type endopeptidase activity (obsolete GO:2001056)","synonyms":[{"name":"positive regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"positive regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2001056"}


id: PBO:0113003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease involved in regulation of pseudohyphal growth; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes human Rh factors; expression is under nitrogen catabolite repression regulation; activity is controlled by phospho-silencing; phosphorylation of Mep2 mediated by Npr1; dephosphorylation involves Psr1p and Psr2p; Twin-His motif ensures transport specificity","termid":"PBO:0113003"}


id: GO:0050035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-sorbose + O2 = 5-dehydro-D-fructose + H2O2.","definition_xrefs":["RHEA:17853","EC:1.1.3.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-sorbose oxidase activity","secondary_identifiers":["KEGG_REACTION:R01695","MetaCyc:L-SORBOSE-OXIDASE-RXN"],"synonyms":[{"name":"L-sorbose:oxygen 5-oxidoreductase activity","type":"related"}],"termid":"GO:0050035"}


id: PR:O13755
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- osm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.05","synonyms":[{"name":"FAD-dependent oxidoreductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FRDS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NADH-dependent fumarate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-osm1","type":"exact"}],"termid":"PR:O13755"}


id: GO:0045890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription of homeotic genes of the trithorax group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription of homeotic gene (trithorax group) (obsolete GO:0045890)","synonyms":[{"name":"regulation of transcription of homeotic gene (trithorax group)","type":"exact"}],"termid":"GO:0045890"}


id: MONDO:0009489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary palmoplantar keratoderma, Gamborg-Nielsen type is characterized by the presence of diffuse palmoplantar keratoderma without associated symptoms. The syndrome has been described in multiple families from the northernmost county of Sweden (Norrbotten). The palmoplantar keratoderma found in the Gamborg-Nielsen type disease is milder than that found in Mal de Meleda but more severe than that found in Thost-Unna palmoplantar keratoderma. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:86923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary palmoplantar keratoderma, Gamborg-Nielsen type","secondary_identifiers":["GARD:16767","MEDGEN:894571","MESH:C565454","OMIM:244850","SCTID:717228004","UMLS:C4273986"],"synonyms":[{"name":"PPK, Gamborg-Nielsen type","type":"exact"},{"name":"PPKNR","type":"related"},{"name":"hereditary palmoplantar hyperkeratosis, Gamborg-Nielsen type","type":"exact"},{"name":"palmoplantar keratoderma, Norrbotten recessive type","type":"related"}],"termid":"MONDO:0009489","xrefs":{"Monarch":{"xref_id":"0009489"}}}


id: GO:1904159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a megasporocyte.","definition_xrefs":["GOC:tair_curators","GOC:TermGenie","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocyte differentiation","termid":"GO:0048533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"megasporocyte differentiation","synonyms":[{"name":"megaspore mother cell differentiation","type":"exact"}],"termid":"GO:1904159"}


id: PBO:0079883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B","termid":"PBO:0079883"}


id: PR:Q9USN4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1529.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USN4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1529.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1529.01","synonyms":[{"name":"Spom972h-SPCC1529.01","type":"exact"}],"termid":"PR:Q9USN4"}


id: MONDO:0007225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibular aplasia-ectrodactyly syndrome is characterized by fibular aplasia and ectrodactyly. Less than 50 familial and sporadic cases have been reported in the literature. Shortening of the femur, a curved tibia, severe foot anomalies and pathologies of the hip, knee and ankle may also be present. The disorder is probably inherited as an autosomal dominant trait, with reduced penetrance, especially in females.","definition_xrefs":["Orphanet:1118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibular aplasia-ectrodactyly syndrome","secondary_identifiers":["GARD:2331","MEDGEN:396290","MESH:C537930","OMIM:113310","UMLS:C1862100"],"synonyms":[{"name":"brachydactyly-ectrodactyly with fibular aplasia or hypoplasia","type":"related"},{"name":"fibular aplasia ectrodactyly","type":"related"}],"termid":"MONDO:0007225","xrefs":{"Monarch":{"xref_id":"0007225"}}}


id: GO:1901691
data:
  {"annotated_genes":["SJAG_01129","SJAG_01669"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89536,89537],"is_not":false,"summary":null,"term":"GO:1901691"}]},"cv_name":"molecular_function","definition":"Binding to proton.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01129":null,"SJAG_01669":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"proton binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen ion binding","type":"exact"}],"termid":"GO:1901691","terms_by_termid":{"GO:1901691":null}}


id: SO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A PRE is a (yeast) TFBS with consensus site [TGAAAC(A/G)].","definition_xrefs":["PMID:1489142","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"},{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone_response_element","synonyms":[{"name":"PRE","type":"exact"},{"name":"pheromone response element","type":"exact"}],"termid":"SO:0002045"}


id: MONDO:0022960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatocardioskeletal syndrome boronne type","termid":"MONDO:0022960","xrefs":{"Monarch":{"xref_id":"0022960"}}}


id: MONDO:0005081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preeclampsia is a hypertensive disorder of pregnancy that is characterized by new-onset hypertension with proteinuria presenting after 20 weeks of gestation, and depending on mild or severe forms may initially present with severe headache, visual disturbances, and hyperreflexia.","definition_xrefs":["Orphanet:275555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"toxemia of pregnancy","termid":"MONDO:0045048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preeclampsia","secondary_identifiers":["ICD9:642.41","ICD9:642.42","MESH:D011225","SCTID:398254007","UMLS:C0032914","ICD9:642.44","GARD:12924","DOID:10591","OMIMPS:189800","ICD9:642.43","EFO:0000668","NCIT:C85021","MedDRA:10036485","ICD9:642.40","MEDGEN:18608"],"synonyms":[{"name":"gestational hypertension","type":"exact"},{"name":"hypertension induced by pregnancy","type":"exact"},{"name":"pre-eclampsia","type":"exact"},{"name":"pre-eclamptic toxaemia","type":"exact"},{"name":"pre-eclamptic toxemia","type":"exact"},{"name":"preeclampsia","type":"exact"},{"name":"preeclampsia/eclampsia","type":"exact"},{"name":"pregnancy associated hypertension","type":"exact"},{"name":"pregnancy toxaemia","type":"exact"},{"name":"pregnancy toxemia","type":"exact"},{"name":"proteinuric hypertension of pregnancy","type":"exact"},{"name":"toxaemia of pregnancy","type":"related"},{"name":"toxemia of pregnancy","type":"related"}],"termid":"MONDO:0005081","xrefs":{"Monarch":{"xref_id":"0005081"}}}


id: PBO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R62 (predicted)","termid":"PBO:0002252"}


id: PBO:0086863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine hydrolase; likely target of Cyc8p-Tup1p-Rfx1p transcriptional regulation; sequence is similar to S. cerevisiae Fsh1p and Fsh2p and the human candidate tumor suppressor OVCA2","termid":"PBO:0086863"}


id: GO:1904189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transformation of host cell by virus.","definition_xrefs":["GOC:TermGenie","PMID:12200142","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of transformation of host cell by virus","termid":"GO:1904187"},{"relation_name":"positively_regulates","term_name":"symbiont-mediated transformation of host cell","termid":"GO:0019087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transformation of host cell by virus","synonyms":[{"name":"activation of transformation of host cell by virus","type":"narrow"},{"name":"activation of viral transformation","type":"narrow"},{"name":"activation of viral transformation of host cell","type":"narrow"},{"name":"positive regulation of viral transformation","type":"exact"},{"name":"positive regulation of viral transformation of host cell","type":"exact"},{"name":"up regulation of transformation of host cell by virus","type":"exact"},{"name":"up regulation of viral transformation","type":"exact"},{"name":"up regulation of viral transformation of host cell","type":"exact"},{"name":"up-regulation of transformation of host cell by virus","type":"exact"},{"name":"up-regulation of viral transformation","type":"exact"},{"name":"up-regulation of viral transformation of host cell","type":"exact"},{"name":"upregulation of transformation of host cell by virus","type":"exact"},{"name":"upregulation of viral transformation","type":"exact"},{"name":"upregulation of viral transformation of host cell","type":"exact"}],"termid":"GO:1904189"}


id: GO:0097139
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BID and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BID-BCL-2 complex","termid":"GO:0097139"}


id: GO:1900367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defense response to insect.","definition_xrefs":["GOC:TermGenie","PMID:22474183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of defense response to insect","termid":"GO:2000068"},{"relation_name":"positively_regulates","term_name":"defense response to insect","termid":"GO:0002213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of defense response to insect","synonyms":[{"name":"activation of defense response to insect","type":"narrow"},{"name":"activation of physiological defense response to insect","type":"narrow"},{"name":"positive regulation of physiological defense response to insect","type":"exact"},{"name":"up regulation of defense response to insect","type":"exact"},{"name":"up regulation of physiological defense response to insect","type":"exact"},{"name":"up-regulation of defense response to insect","type":"exact"},{"name":"up-regulation of physiological defense response to insect","type":"exact"},{"name":"upregulation of defense response to insect","type":"exact"},{"name":"upregulation of physiological defense response to insect","type":"exact"}],"termid":"GO:1900367"}


id: PBO:0042062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 125","termid":"PBO:0042062"}


id: PBO:0042534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5 regulatory subunit associated protein 1","termid":"PBO:0042534"}


id: SO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region in a genome which promotes recombination.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_hotspot","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_hotspot"],"synonyms":[{"name":"recombination hotspot","type":"exact"}],"termid":"SO:0000339"}


id: MONDO:0012935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 4","secondary_identifiers":["OMIM:612558","UMLS:C2675515","MEDGEN:382620"],"synonyms":[{"name":"Clls4","type":"related"},{"name":"leukemia, chronic lymphocytic susceptibility to, 4","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 4","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 4","type":"exact"}],"termid":"MONDO:0012935","xrefs":{"Monarch":{"xref_id":"0012935"}}}


id: PBO:0110321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 1 (ABCC1 blood group)","termid":"PBO:0110321"}


id: MONDO:0042493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal non-Hodgkin lymphoma that arises from the stomach with the bulk of the mass located in the stomach. The vast majority of cases are diffuse large B-cell lymphomas and B-cell lymphomas of the mucosa-associated lymphoid tissue.","definition_xrefs":["NCIT:C27235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric lymphoma","termid":"MONDO:0001059"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"gastric non-hodgkin lymphoma","secondary_identifiers":["MEDGEN:232549","GARD:89","UMLS:C1333784","SCTID:448709005"],"synonyms":[{"name":"gastric non-Hodgkin lymphoma","type":"exact"},{"name":"gastric non-Hodgkin's lymphoma","type":"exact"},{"name":"lymphoma, gastric non Hodgkins type","type":"related"},{"name":"non-Hodgkin lymphoma of stomach","type":"exact"},{"name":"non-Hodgkin's lymphoma of stomach","type":"exact"},{"name":"non-Hodgkin's lymphoma of the stomach","type":"exact"},{"name":"non-Hodgkins gastric lymphoma","type":"related"},{"name":"primary gastric non-Hodgkin's lymphoma","type":"exact"},{"name":"stomach lymphoma, non-Hodgkins type","type":"related"},{"name":"stomach non-Hodgkin lymphoma","type":"exact"}],"termid":"MONDO:0042493","xrefs":{"Monarch":{"xref_id":"0042493"}}}


id: PBO:0116724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3CA divergent transcript","termid":"PBO:0116724"}


id: PBO:0058483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5590","termid":"PBO:0058483"}


id: PBO:0061640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 18","termid":"PBO:0061640"}


id: PBO:0027347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_menadione","termid":"PBO:0027347"}


id: GO:0021563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve development","synonyms":[{"name":"CN IX development","type":"related"},{"name":"cranial nerve 9 development","type":"exact"},{"name":"cranial nerve IX development","type":"exact"}],"termid":"GO:0021563"}


id: PATO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's loss of myelin sheath.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/demyelinated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"demyelinated","termid":"PATO:0002218"}


id: MONDO:0012051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic periodontitis","termid":"MONDO:0005593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodontitis, aggressive, 2","secondary_identifiers":["MEDGEN:370671","UMLS:C1969478","OMIM:608526","MESH:C566946"],"synonyms":[{"name":"periodontitis, aggressive, 2","type":"exact"},{"name":"periodontitis, aggressive, type 2","type":"exact"}],"termid":"MONDO:0012051","xrefs":{"Monarch":{"xref_id":"0012051"}}}


id: MONDO:1012427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy (limb-girdle), non-human animal","termid":"MONDO:1011803"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), domestic cat","secondary_identifiers":["OMIA:001621-9685"],"termid":"MONDO:1012427","xrefs":{"Monarch":{"xref_id":"1012427"}}}


id: GO:0035259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear glucocorticoid receptor.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"nuclear glucocorticoid receptor binding","synonyms":[{"name":"glucocorticoid receptor binding","type":"broad"}],"termid":"GO:0035259"}


id: PBO:0048905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA7B divergent transcript","termid":"PBO:0048905"}


id: GO:0052683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (Z)-gamma-bisabolene + diphosphate.","definition_xrefs":["RHEA:26081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(Z)-gamma-bisabolene synthase activity","secondary_identifiers":["EC:4.2.3.40","MetaCyc:RXN-10005"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(Z)-gamma-bisabolene-forming] activity","type":"exact"}],"termid":"GO:0052683"}


id: GO:0003922
data:
  {"annotated_genes":["SJAG_00964","SJAG_04634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95286],"is_not":false,"summary":null,"term":"GO:0003922"},{"annotations":[76489],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003921"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + XMP + L-glutamine + H2O = AMP + diphosphate + GMP + L-glutamate + 2H+.","definition_xrefs":["RHEA:11680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_04634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"GMP synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GMP-SYN-GLUT-RXN","EC:6.3.5.2","Wikipedia:GMP_synthase_(glutamine-hydrolysing)","Reactome:R-HSA-9748957","Reactome:R-HSA-73792"],"synonyms":[{"name":"GMP synthase (glutamine-hydrolysing)","type":"related"},{"name":"GMP synthetase (glutamine-hydrolysing)","type":"related"},{"name":"GMP synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"glutamine amidotransferase activity","type":"related"},{"name":"guanosine 5'-monophosphate synthetase activity","type":"related"},{"name":"guanosine monophosphate synthetase (glutamine-hydrolyzing)","type":"related"},{"name":"guanylate synthetase (glutamine-hydrolyzing)","type":"related"},{"name":"xanthosine 5'-phosphate amidotransferase activity","type":"related"},{"name":"xanthosine-5'-phosphate:L-glutamine amido-ligase (AMP-forming)","type":"related"}],"termid":"GO:0003922","terms_by_termid":{"GO:0003921":null,"GO:0003922":null}}


id: PBO:0079115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 15 pseudogene 3","termid":"PBO:0079115"}


id: PBO:0117194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA4 antisense RNA 2","termid":"PBO:0117194"}


id: PR:O74747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postreplication repair E3 ubiquitin-protein ligase rad18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.06","synonyms":[{"name":"RAD18 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rhp18","type":"exact"}],"termid":"PR:O74747"}


id: MONDO:0009811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoma of middle ear","secondary_identifiers":["OMIM:259650","UMLS:C1850142","MEDGEN:342425","MESH:C564917"],"synonyms":[{"name":"osteoma of middle ear","type":"exact"}],"termid":"MONDO:0009811","xrefs":{"Monarch":{"xref_id":"0009811"}}}


id: PBO:0080069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 34","termid":"PBO:0080069"}


id: GO:0061902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of 1-phosphatidylinositol-3-kinase activity.","definition_xrefs":["GOC:aruk","PMID:18723082","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of 1-phosphatidylinositol-3-kinase activity (obsolete GO:0061902)","termid":"GO:0061902"}


id: PBO:0060620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK adaptor protein 1","termid":"PBO:0060620"}


id: GO:0062119
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that associates with chromatin to form linear elements in fission yeast. In S. pombe, the LinE complex contains four main structural components (Rec10, Rec25, Rec27, and Mug20) and other associated proteins.","definition_xrefs":["PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"LinE complex","termid":"GO:0062119"}


id: PBO:0031521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA-7-methylguanine_glycosylase_activity","termid":"PBO:0031521"}


id: GO:0160250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues, occurring through a ADP-glucose intermediate.","definition_xrefs":["MetaCyc:GLYCOGENSYNTH-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"glycogen biosynthetic process via ADP-glucose","termid":"GO:0160250"}


id: PBO:0089446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-binding dehydrogenase","termid":"PBO:0089446"}


id: MONDO:1010742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary severe ulcerative dermatitis, growth restriction and increased infectious disease susceptibility in cattle due to a variation in the IL17RA gene.","definition_xrefs":["PMID:32448141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency IL17RA-related, cattle","secondary_identifiers":["OMIA:002271-9913"],"termid":"MONDO:1010742","xrefs":{"Monarch":{"xref_id":"1010742"}}}


id: PBO:0062859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoraplin","termid":"PBO:0062859"}


id: GO:0046536
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein or protein-RNA complex that localizes to one or more of the sex chromosome(s), where it acts to normalize transcription between different sexes.","definition_xrefs":["GOC:kmv","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"},{"relation_name":"part_of","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dosage compensation complex","termid":"GO:0046536"}


id: PBO:0070422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase like 1","termid":"PBO:0070422"}


id: PBO:0004976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene malic enzyme (predicted)","termid":"PBO:0004976"}


id: GO:0020003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Membrane-bounded vacuole within a host cell in which a symbiont organism resides. The vacuole membrane is derived from both the host and symbiont.","definition_xrefs":["GOC:mb","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symbiont-containing vacuole","synonyms":[{"name":"SCV","type":"exact"},{"name":"Salmonella-containing vacuole","type":"narrow"},{"name":"bacterium-containing vacuole","type":"narrow"},{"name":"parasitophorous vacuole","type":"exact"},{"name":"pathogen-occupied vacuole","type":"narrow"}],"termid":"GO:0020003"}


id: PBO:0067655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 832, pseudogene","termid":"PBO:0067655"}


id: PBO:0053662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 839","termid":"PBO:0053662"}


id: MONDO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dengue disease","termid":"MONDO:0005502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymptomatic dengue","secondary_identifiers":["DOID:0050143"],"termid":"MONDO:0000259","xrefs":{"Monarch":{"xref_id":"0000259"}}}


id: MONDO:0017523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly of a biphalangeal thumb","termid":"MONDO:0008269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of a biphalangeal thumb, unilateral","secondary_identifiers":["Orphanet:295144"],"synonyms":[{"name":"preaxial polydactyly type 1, unilateral","type":"exact"}],"termid":"MONDO:0017523","xrefs":{"Monarch":{"xref_id":"0017523"}}}


id: GO:0071182
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch4 (ICN4), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN4 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch4 complex","type":"exact"}],"termid":"GO:0071182"}


id: PBO:0005485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf11","termid":"PBO:0005485"}


id: PBO:0043915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyocyte maturation associated lncRNA","termid":"PBO:0043915"}


id: PBO:0072948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 28","termid":"PBO:0072948"}


id: GO:1905387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a beta-carotene stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:16771696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to beta-carotene","synonyms":[{"name":"response to beta,beta-carotene","type":"exact"}],"termid":"GO:1905387"}


id: PBO:0068863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 103, pseudogene","termid":"PBO:0068863"}


id: MONDO:1010138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pemphigus, non-human animal","secondary_identifiers":["OMIA:001188"],"termid":"MONDO:1010138","xrefs":{"Monarch":{"xref_id":"1010138"}}}


id: PBO:0076630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 1 X-linked","termid":"PBO:0076630"}


id: GO:0055077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables the transport of a solute across a membrane via a gap junction hemi-channel. Two gap junction hemi-channels coupled together form a complete gap junction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wide pore channel activity","termid":"GO:0022829"},{"relation_name":"part_of","term_name":"gap junction channel activity","termid":"GO:0005243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"part_of","termid":"GO:0005215"},{"rel_name":"part_of","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"gap junction hemi-channel activity","synonyms":[{"name":"connexon channel activity","type":"exact"}],"termid":"GO:0055077"}


id: GO:0008538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the activation of the proteasome, a large multisubunit complex which performs regulated ubiquitin-dependent cytosolic and nuclear proteolysis.","definition_xrefs":["GOC:rn","PMID:10428771"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome activator activity (obsolete GO:0008538)","synonyms":[{"name":"PA28","type":"narrow"},{"name":"proteasome activator activity","type":"exact"}],"termid":"GO:0008538"}


id: PBO:0011525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis","termid":"PBO:0011525"}


id: FYPO:0003011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased.","definition_xrefs":["PMID:23936074","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin during vegetative growth","synonyms":[{"name":"increased protein localisation to chromatin","type":"exact"},{"name":"increased protein localization to chromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003011"}


id: MONDO:1011352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radiation-induced disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation-induced disorder, non-human animal","termid":"MONDO:1011352","xrefs":{"Monarch":{"xref_id":"1011352"}}}


id: PBO:0002647
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylation disorders","termid":"PBO:0002647"}


id: PBO:0017937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ran1/Pat1","termid":"PBO:0017937"}


id: PBO:0089131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper of TIM Hot15","termid":"PBO:0089131"}


id: MONDO:0009548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis with severe ocular involvement (FHHNCOI) is a form of familial primary hypomagnesemia (FPH), characterized by excessive magnesium and calcium renal wasting, bilateral nephrocalcinosis, progressive renal failure and severe ocular abnormalities.","definition_xrefs":["Orphanet:2196"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"oculocerebrorenal syndrome","termid":"MONDO:0010645"},{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis","termid":"MONDO:0017624"},{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"renal hypomagnesemia 5 with ocular involvement","secondary_identifiers":["UMLS:C4721891","MEDGEN:1648449","DOID:0060881","GARD:3451","MESH:C536148","OMIM:248190"],"synonyms":[{"name":"FHHNC with severe ocular involvement","type":"exact"},{"name":"FHHNCOI","type":"exact"},{"name":"HOMG5","type":"related"},{"name":"Meier Blumberg Imahorn syndrome","type":"related"},{"name":"Meier-Blumberg-Imahorn syndrome","type":"exact"},{"name":"bilateral macular coloboma with hypercalciuria","type":"exact"},{"name":"familial hypomagnesemia with hypercalciuria, nephrocalcinosis and severe ocular involvement","type":"exact"},{"name":"familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis with severe ocular involvement","type":"related"},{"name":"hypercalciuria-bilateral macular coloboma syndrome","type":"exact"},{"name":"hypomagnesemia 5, renal, with ocular involvement","type":"related"},{"name":"hypomagnesemia, familial, with hypercalciuria, nephrocalcinosis, and severe ocular involvement","type":"related"},{"name":"hypomagnesemia, renal, with ocular involvement","type":"related"},{"name":"idiopathic hypercalciuria with bilateral macular colobomata","type":"related"},{"name":"macular coloboma, bilateral, with hypercalciuria","type":"related"}],"termid":"MONDO:0009548","xrefs":{"Monarch":{"xref_id":"0009548"}}}


id: GO:0071539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the centrosome.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to centrosome","synonyms":[{"name":"protein localisation to centrosome","type":"exact"}],"termid":"GO:0071539"}


id: FYPO:0005775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to acetaldehyde. Cells stop growing (and may die) at a concentration of acetaldehyde that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to acetaldehyde","synonyms":[{"name":"hypersensitive to acetaldehyde","type":"exact"},{"name":"sensitive to acetaldehyde during mitotic cell cycle","type":"related"},{"name":"sensitive to acetaldehyde during vegetative growth","type":"exact"}],"termid":"FYPO:0005775"}


id: MONDO:0700166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sexually transmitted tumor arising from histiocytes and occurring in dogs.","definition_xrefs":["NCIT:C162473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venereal tumors, veterinary","termid":"MONDO:0025478"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine transmissible venereal tumor","termid":"MONDO:0700166","xrefs":{"Monarch":{"xref_id":"0700166"}}}


id: PBO:0049313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 2 (gene/pseudogene)","termid":"PBO:0049313"}


id: FYPO:0005953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by the mitotic G2 DNA damage checkpoint is greater than in wild type during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint during cellular response to ionizing radiation","termid":"FYPO:0003490"},{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000298","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"delayed mitotic G2 DNA damage checkpoint deactivation during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of mitotic G2 DNA damage checkpoint during cellular response to IR","type":"exact"},{"name":"prolonged mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005953"}


id: PBO:0032764
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression of exogenous PCNA-binding peptide fused to EGFP causes phenotype of inviable elongated mononucleate cells","termid":"PBO:0032764"}


id: PBO:0004274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40/YVTN repeat-like","termid":"PBO:0004274"}


id: GO:0060272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of skeletal joints are generated and organized during the embryonic phase. A skeletal joint is the connecting structure between the bones of the skeleton.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:bf","UBERON:0000982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic skeletal system morphogenesis","termid":"GO:0048704"},{"relation_name":"part_of","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal joint morphogenesis","termid":"GO:0060272"}


id: GO:0106128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:BHF_miRNA","PMID:23447642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport","termid":"GO:0051926"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium entry","termid":"GO:2001256"},{"relation_name":"negatively_regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of store-operated calcium entry","termid":"GO:0106128"}


id: MONDO:0005508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bone neoplasm characterized by development of two or more cartilage capped bony outgrowths (osteochondromas) of the long bones.","definition_xrefs":["Orphanet:321"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"exostosis","termid":"MONDO:0002181"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary multiple osteochondromas","secondary_identifiers":["NANDO:2200049","MESH:D005097","DOID:206","MEDGEN:4612","NANDO:2201014","OMIMPS:133700","NANDO:2201015","SCTID:254044004","NCIT:C5183","NORD:1233","SCTID:716742001","GARD:7035","UMLS:C0015306","icd11.foundation:1578364807"],"synonyms":[{"name":"Bessel-Hagen disease","type":"exact"},{"name":"EXT","type":"related"},{"name":"HMO","type":"related"},{"name":"exostoses, multiple","type":"exact"},{"name":"hereditary multiple exostoses","type":"related"},{"name":"hereditary multiple exostoses 1","type":"narrow"},{"name":"hereditary multiple exostoses 2","type":"narrow"},{"name":"hereditary multiple exostoses 3","type":"narrow"},{"name":"hereditary multiple exostosis","type":"related"},{"name":"multiple cartilaginous exostoses","type":"exact"},{"name":"multiple congenital exostosis","type":"exact"},{"name":"multiple exostoses","type":"related"},{"name":"multiple exostosis syndromes","type":"exact"},{"name":"multiple ostechondromas","type":"exact"},{"name":"osteochondromatosis syndrome","type":"exact"},{"name":"osteochondromatosis syndrome (disorder) [ambiguous]","type":"exact"}],"termid":"MONDO:0005508","xrefs":{"Monarch":{"xref_id":"0005508"}}}


id: FYPO:0007694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange activator is absent.","definition_xrefs":["PomBase:mah","PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"abolished DNA strand exchange activator activity","synonyms":[{"name":"DNA strand exchange activator activity abolished","type":"exact"},{"name":"abolished RecA-family recombinase activator activity","type":"exact"},{"name":"abolished positive regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007694"}


id: GO:0072674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized monocyte acquires the specialized features of a multinuclear osteoclast. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue.","definition_xrefs":["CL:0000779","GOC:mah","PMID:12713016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multinuclear osteoclast differentiation","synonyms":[{"name":"multinuclear osteoclast formation","type":"related"},{"name":"multinuclear osteoclast morphogenesis","type":"related"}],"termid":"GO:0072674"}


id: PBO:0075355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 3","termid":"PBO:0075355"}


id: MONDO:0014818
data:
  {"annotated_genes":["SJAG_03182"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87660],"is_not":false,"summary":null,"term":"MONDO:0014818"}]},"cv_name":"mondo","definition":"Any familial nephrotic syndrome in which the cause of the disease is a mutation in the NUP205 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:900240","GARD:16167","UMLS:C4225165","OMIM:616893","DOID:0080381"],"synonyms":[{"name":"NPHS13","type":"exact"},{"name":"NUP205 familial nephrotic syndrome","type":"exact"},{"name":"familial nephrotic syndrome caused by mutation in NUP205","type":"exact"},{"name":"nephrotic syndrome, type 13","type":"exact"},{"name":"nephrotic syndrome, type 13; NPHS13","type":"exact"}],"termid":"MONDO:0014818","terms_by_termid":{"MONDO:0014818":null},"xrefs":{"Monarch":{"xref_id":"0014818"}}}


id: PBO:0083387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps essential, verified gene PLP2/YOR281C","termid":"PBO:0083387"}


id: MONDO:1012894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neoplastic disease characterized by multiple organ hamartomas that occurs in pigs due to a mutation in the TSC1 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:33612456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberous sclerosis, TSC1-related, pig","secondary_identifiers":["OMIA:002427-9823"],"termid":"MONDO:1012894","xrefs":{"Monarch":{"xref_id":"1012894"}}}


id: MONDO:0013195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TNNC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 13","secondary_identifiers":["MEDGEN:442487","UMLS:C2750472","OMIM:613243","DOID:0110319","MESH:C567686"],"synonyms":[{"name":"CMH13","type":"exact"},{"name":"TNNC1 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 13","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 13","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 13","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 13","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in TNNC1","type":"exact"},{"name":"hypertrophic cardiomyopathy type 13","type":"exact"}],"termid":"MONDO:0013195","xrefs":{"Monarch":{"xref_id":"0013195"}}}


id: FYECO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Nitrogen was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000062 absence of nitrogen (obsolete FYECO:0000062)","termid":"FYECO:0000062"}


id: PBO:0039616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2 pseudogene 3","termid":"PBO:0039616"}


id: MONDO:0022448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyoplasia mandibulofacial dysostosis (obsolete MONDO:0022448)","termid":"MONDO:0022448","xrefs":{"Monarch":{"xref_id":"0022448"}}}


id: PBO:0068547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 153, pseudogene","termid":"PBO:0068547"}


id: PBO:0005346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic protease, yapsin Yps1","termid":"PBO:0005346"}


id: GO:0071348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-11 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-11","termid":"GO:0071105"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-11","synonyms":[{"name":"cellular response to IL-11","type":"exact"}],"termid":"GO:0071348"}


id: GO:0070472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uterine smooth muscle contraction","synonyms":[{"name":"regulation of myometrial contraction","type":"exact"},{"name":"regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"regulation of myometrium contraction","type":"exact"}],"termid":"GO:0070472"}


id: GO:0140237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the presynapse, and that modulates chemical synaptic transmission.","definition_xrefs":["PMID:27321671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at presynapse","termid":"GO:0140236"},{"relation_name":"regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"translation at presynapse, modulating chemical synaptic transmission","termid":"GO:0140237"}


id: GO:0002723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"positive regulation of cytokine production involved in immune response","termid":"GO:0002720"},{"relation_name":"is_a","term_name":"regulation of B cell cytokine production","termid":"GO:0002721"},{"relation_name":"positively_regulates","term_name":"B cell cytokine production","termid":"GO:0002368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of B cell cytokine production","synonyms":[{"name":"activation of B cell cytokine production","type":"narrow"},{"name":"positive regulation of B lymphocyte cytokine production","type":"exact"},{"name":"positive regulation of B-cell cytokine production","type":"exact"},{"name":"positive regulation of B-lymphocyte cytokine production","type":"exact"},{"name":"stimulation of B cell cytokine production","type":"narrow"},{"name":"up regulation of B cell cytokine production","type":"exact"},{"name":"up-regulation of B cell cytokine production","type":"exact"},{"name":"upregulation of B cell cytokine production","type":"exact"}],"termid":"GO:0002723"}


id: GO:0047931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-glucosamine = ADP + D-glucosamine 6-phosphate + H+.","definition_xrefs":["RHEA:10948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glucosamine kinase activity","secondary_identifiers":["MetaCyc:GLUCOSAMINE-KINASE-RXN","EC:2.7.1.8"],"synonyms":[{"name":"ATP:2-amino-2-deoxy-D-glucose-6-phosphotransferase activity","type":"related"},{"name":"ATP:D-glucosamine phosphotransferase activity","type":"related"},{"name":"aminodeoxyglucose kinase activity","type":"related"},{"name":"glucosamine kinase (phosphorylating)","type":"related"}],"termid":"GO:0047931"}


id: PBO:0081517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 426","termid":"PBO:0081517"}


id: PBO:0089477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L13/L16","termid":"PBO:0089477"}


id: GO:1905496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of triplex DNA binding.","definition_xrefs":["GO_REF:0000059","PMID:26503245","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of triplex DNA binding (obsolete GO:1905496)","termid":"GO:1905496"}


id: FYPO:0004330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type) at telomeres. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PMID:17032733","GO:0051306","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic sister chromatid separation","termid":"FYPO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic telomeric DNA separation","synonyms":[{"name":"normal mitotic chromosome separation at telomere","type":"exact"},{"name":"normal mitotic sister chromatid separation at telomere","type":"exact"},{"name":"normal mitotic telomere disjunction","type":"exact"},{"name":"normal mitotic telomeric DNA separation during vegetative growth","type":"exact"},{"name":"normal telomere separation","type":"exact"},{"name":"normal telomeric DNA separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004330"}


id: MONDO:0009873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pilodental dysplasia-refractive errors syndrome is a rare ectodermal dysplasia syndrome characterized by dysplastic abnormalities of the hair and teeth (including hypodontia, abnormally shaped teeth, scalp hypotrichosis and pili annulati), follicular hyperkeratosis on the trunk and limbs, and hyperopia. Intensified delineation, reticular hyperpigmentation of the nape and astigmatism have also been reported. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:2892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pilodental dysplasia-refractive errors syndrome","secondary_identifiers":["MEDGEN:376661","OMIM:262020","GARD:277","UMLS:C1849805","MESH:C535763"],"synonyms":[{"name":"Euhidrotic ectodermal dysplasia","type":"exact"},{"name":"Kopysc-Barczyk-Krol syndrome","type":"exact"},{"name":"PILODENTAL dysplasia with refractive errors","type":"related"},{"name":"Trichodental dysplasia with hyperopia","type":"related"}],"termid":"MONDO:0009873","xrefs":{"Monarch":{"xref_id":"0009873"}}}


id: MONDO:0015519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"leukoencephalopathy with vanishing white matter","termid":"MONDO:0800448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"congenital or early infantile CACH syndrome","secondary_identifiers":["Orphanet:157713","GARD:16978","icd11.foundation:2136523495","MEDGEN:1842419","UMLS:C5680650"],"termid":"MONDO:0015519","xrefs":{"Monarch":{"xref_id":"0015519"}}}


id: MOD:00935
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Oxidation of methionine to methionine sulfoxide with neutral loss of CH3SOH.","definition_xrefs":["PubMed:9004526","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine oxidation with neutral loss of 64 Da","termid":"MOD:00935"}


id: PBO:0083747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the TIM23 complex; involved in protein import into mitochondrial matrix and inner membrane; with Tim17p, contributes to architecture and function of the import channel; TIM23 complex is short for the translocase of the inner mitochondrial membrane","termid":"PBO:0083747"}


id: PR:000060241
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear fusion protein tht1 (Schizosaccharomyces pombe) that has been palmitoylated at positions equivalent to Cys-65 and Cys-78 of the amino acid sequence represented by UniProtKB:Q09684. Example: UniProtKB:Q09684, Cys-65/Cys-78, MOD:00047.","definition_xrefs":["PRO:DAN","PomBase:MLR","PMID:36650056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tht1/Palm-C65C78","pombase_gene_id":"SPAC13C5.03","synonyms":[{"name":"PomBase_original_PRO_term_name: nuclear fusion protein tht1 palmitoylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-tht1/Palm:1","type":"exact"},{"name":"Tht1/Palm-C65C78","type":"exact"},{"name":"UniProtKB:Q09684, Cys-65/Cys-78, MOD:00115","type":"narrow"}],"termid":"PR:000060241"}


id: MONDO:1011198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypophosphatemic rickets in rabbits due to ablation of the DMP1 gene created using CRISPR/Cas9.","definition_xrefs":["OMIA:001542-9986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatemic rickets, DMP1-related, rabbit","synonyms":[{"name":"hypophosphatemic rickets, autosomal recessive, 1, rabbit","type":"related"}],"termid":"MONDO:1011198","xrefs":{"Monarch":{"xref_id":"1011198"}}}


id: PBO:0085330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol transfer protein; has a potential role in regulating lipid and fatty acid metabolism under heme-depleted conditions; interacts specifically with thioredoxin peroxidase; may have a role in oxidative stress resistance; protein abundance increases in response to DNA replication stress","termid":"PBO:0085330"}


id: PR:P48003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pht1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P48003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.Z (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.10c","synonyms":[{"name":"Spom972h-pht1","type":"exact"}],"termid":"PR:P48003"}


id: PBO:0040445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 9A (putative)","termid":"PBO:0040445"}


id: PBO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.10","termid":"PBO:0000918"}


id: PBO:0058884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10400","termid":"PBO:0058884"}


id: PBO:0043356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clarin 2","termid":"PBO:0043356"}


id: MONDO:0010243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked immunoneurologic disorder is characterized by immune deficiency and neurological disorders in females, and by neonatal death in males.","definition_xrefs":["Orphanet:2571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"X-linked immunoneurologic disorder","secondary_identifiers":["MESH:C536743","MEDGEN:341162","OMIM:300076","SCTID:719827008","icd11.foundation:1464555617","UMLS:C1848144","GARD:274"],"synonyms":[{"name":"Woods Black Norbury syndrome","type":"exact"},{"name":"Woods-Black-Norbury syndrome","type":"exact"},{"name":"Woods-Black-Norbury syndrome, X-linked dominant","type":"exact"},{"name":"X-linked immunoneurological disorder","type":"exact"},{"name":"immunoneurologic disorder, X-linked","type":"exact"},{"name":"neonatal death immune deficiency","type":"exact"}],"termid":"MONDO:0010243","xrefs":{"Monarch":{"xref_id":"0010243"}}}


id: GO:0018547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of one or more nitrite (NO2-) groups from nitroglycerin or a derivative.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nitroglycerin reductase activity (obsolete GO:0018547)","synonyms":[{"name":"NG reductase activity","type":"exact"}],"termid":"GO:0018547"}


id: PBO:0090317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc3","termid":"PBO:0090317"}


id: PBO:0057879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3183","termid":"PBO:0057879"}


id: GO:0098732
data:
  {"annotated_genes":["SJAG_02268","SJAG_02056","SJAG_00774"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57203,62106,71402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098734"}]},"cv_name":"biological_process","definition":"The removal of an acyl group, any group or radical of the form RCO- where R is an organic group, from a macromolecule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macromolecule deacylation","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0098732","terms_by_termid":{"GO:0098734":null}}


id: MONDO:0012523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PRCD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 36","secondary_identifiers":["DOID:0110405","ICD10CM:H35.5","MESH:C566431","GARD:10403","UMLS:C1864621","OMIM:610599","MEDGEN:351175"],"synonyms":[{"name":"PRCD retinitis pigmentosa","type":"exact"},{"name":"RP 36","type":"related"},{"name":"RP36","type":"exact"},{"name":"retinitis pigmentosa 36","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PRCD","type":"exact"},{"name":"retinitis pigmentosa type 36","type":"exact"}],"termid":"MONDO:0012523","xrefs":{"Monarch":{"xref_id":"0012523"}}}


id: PBO:0050358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 61","termid":"PBO:0050358"}


id: GO:1905219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of platelet formation.","definition_xrefs":["GO_REF:0000058","PMID:10606160","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of myeloid cell differentiation","termid":"GO:0045637"},{"relation_name":"regulates","term_name":"platelet formation","termid":"GO:0030220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of platelet formation","synonyms":[{"name":"regulation of platelet extrusion","type":"exact"}],"termid":"GO:1905219"}


id: PBO:0089710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ctf18 RFC-like complex subunit Ctf18","termid":"PBO:0089710"}


id: FYPO:0005412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of meiosis","termid":"FYPO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of meiosis II","synonyms":[{"name":"delayed meiosis II","type":"exact"},{"name":"delayed onset of second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005412"}


id: PBO:0081367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 205","termid":"PBO:0081367"}


id: PBO:0063608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylformylglycinamidine synthase","termid":"PBO:0063608"}


id: PBO:0013748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methylsterol oxidase Erg25 (predicted)","termid":"PBO:0013748"}


id: PBO:0041715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 6","termid":"PBO:0041715"}


id: FYPO:0003970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and partially separated DNA masses are connected by one or more bridges formed of chromatin.","definition_xrefs":["PomBase:mah","PMID:12455694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000337","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge","synonyms":[{"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge, during vegetative growth","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with chromatin bridge","type":"related"},{"name":"incomplete sister chromatid segregation, with chromatin bridge during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003970"}


id: GO:0032371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"regulates","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of sterol transport","termid":"GO:0032371"}


id: GO:2000439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monocyte extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular extravasation","termid":"GO:0002693"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of monocyte extravasation","termid":"GO:2000437"},{"relation_name":"positively_regulates","term_name":"monocyte extravasation","termid":"GO:0035696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte extravasation","termid":"GO:2000439"}


id: MONDO:0008552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited blood coagulation disease characterized by autosomal dominant inheritance with macrothrombocytopenia, platelet anisocytosis, prolonged bleeding time but only mildly increased bleeding tendency that has material basis in heterozygous mutation in the ITGA2B gene on chromosome 17q21.31 or the ITGB3 gene on chromosome 17q21.32.","definition_xrefs":["DOID:0060691","PMID:21454453","PMID:18065693","PMID:9834222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 16","secondary_identifiers":["MEDGEN:1781222","OMIM:187800","MESH:C566061","UMLS:C5442010"],"synonyms":[{"name":"BDPLT16","type":"related"},{"name":"Glanzmann thrombasthenia, autosomal dominant","type":"related"},{"name":"autosomal dominant Glanzmann thrombasthenia","type":"exact"},{"name":"autosomal dominant thrombasthenia of Glanzmann and Naegeli","type":"exact"},{"name":"bleeding disorder, platelet-type, 16","type":"related"},{"name":"bleeding disorder, platelet-type, 16, autosomal dominant","type":"exact"},{"name":"platelet-type bleeding disorder 16","type":"exact"},{"name":"thrombasthenia of Glanzmann and Naegeli, autosomal dominant","type":"related"}],"termid":"MONDO:0008552","xrefs":{"Monarch":{"xref_id":"0008552"}}}


id: PBO:0059331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6","termid":"PBO:0059331"}


id: PBO:0028179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_splicing","termid":"PBO:0028179"}


id: GO:1901638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any copper ion import that takes place in ascospore-type prospore.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion import into ascospore-type prospore (obsolete GO:1901638)","synonyms":[{"name":"copper ion import into ascospore-type prospore","type":"exact"},{"name":"copper ion uptake in ascospore-type prospore","type":"exact"}],"termid":"GO:1901638"}


id: PBO:0068002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 304","termid":"PBO:0068002"}


id: FYPO:0003539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) over the entire length of the chromosomes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased global homologous chromosome pairing","synonyms":[{"name":"decreased generalised homologous chromosome pairing","type":"exact"},{"name":"decreased global homologous chromosome pairing at meiosis","type":"exact"},{"name":"decreased global synapsis","type":"exact"},{"name":"globally decreased homologous chromosome pairing","type":"exact"},{"name":"reduced global homologous chromosome pairing","type":"exact"}],"termid":"FYPO:0003539"}


id: GO:1900539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"fumonisin metabolic process","synonyms":[{"name":"fumonisin metabolism","type":"related"}],"termid":"GO:1900539"}


id: GO:0048536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spleen development","termid":"GO:0048536"}


id: MONDO:0004847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract with no obvious cause occurring in persons over 50 years old.","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"senile cataract","secondary_identifiers":["MEDGEN:11372","ICD9:366.10","DOID:9669","NCIT:C35012","SCTID:39450006","UMLS:C0036646","ICD9:366.1"],"termid":"MONDO:0004847","xrefs":{"Monarch":{"xref_id":"0004847"}}}


id: MOD:00146
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a two-iron two-sulfur cluster to tetrakis-L-cysteinyl diiron disulfide.","definition_xrefs":["PubMed:6801028","PubMed:7763242","PubMed:8688437","RESID:AA0137","PubMed:2123937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tetrakis-L-cysteinyl diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"METAL Iron-sulfur (2Fe-2S); shared with dimeric partner","type":"exact"},{"name":"tetrakis-L-cysteinyl diiron disulfide","type":"exact"},{"name":"tetrakiscysteinato-1kappa(2)S,2kappa(2)S-di-mu-sulfido-diiron","type":"exact"}],"termid":"MOD:00146"}


id: MONDO:0010975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arrhythmogenic right ventricular dysplasia 2 (obsolete MONDO:0010975)","termid":"MONDO:0010975","xrefs":{"Monarch":{"xref_id":"0010975"}}}


id: FYPO:0000665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a peptidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal peptidase activity","synonyms":[{"name":"normal protease activity","type":"exact"}],"termid":"FYPO:0000665"}


id: PBO:0039585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANO3 antisense RNA 1","termid":"PBO:0039585"}


id: PBO:0072384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 10","termid":"PBO:0072384"}


id: FYPO:0008129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of two methyl groups to the N2 position of a guanine residue in a tRNA molecule is increased. Normally, two methyl groups are transferred to the G26 residue.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000294","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased tRNA guanosine N2,N2-dimethylation","termid":"FYPO:0008129"}


id: MONDO:0006460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital benign cyst arising from the remnants of the thyroglossal duct. It is usually located in the midline of the neck.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroglossal duct cyst","secondary_identifiers":["Orphanet:489","EFO:1000585","MESH:D013955","ICD9:759.2","MEDGEN:11810","SCTID:39462005","UMLS:C0040124"],"synonyms":[{"name":"thyroglossal tract cyst","type":"exact"}],"termid":"MONDO:0006460","xrefs":{"Monarch":{"xref_id":"0006460"}}}


id: MONDO:0011257
data:
  {"annotated_genes":["SJAG_02648"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88162],"is_not":false,"summary":null,"term":"MONDO:0011257"}]},"cv_name":"mondo","definition":"MPI-CDG is a form of congenital disorders of N-linked glycosylation, characterized by cyclic vomiting, profound hypoglycemia, failure to thrive, liver fibrosis, gastrointestinal complications (protein-losing enteropathy with hypoalbuminaemia, life-threatening intestinal bleeding of diffuse origin), and thrombotic events (protein C and S deficiency, low anti-thrombine III levels), whereas neurological development and cognitive capacity is usually normal. The clinical course is variable even within families. The disease is caused by loss of function of the gene MPI (15q24.1).","definition_xrefs":["Orphanet:79319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0005046"],"is_obsolete":false,"name":"MPI-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:124668009","MEDGEN:400692","OMIM:602579","MESH:C535740","GARD:9830","DOID:0080554","ICD9:277.6","UMLS:C1865145"],"synonyms":[{"name":"CDG 1B","type":"related"},{"name":"CDG Ib","type":"related"},{"name":"CDG gastrointestinal type","type":"related"},{"name":"CDG syndrome type IB","type":"exact"},{"name":"CDG, gastrointestinal type","type":"related"},{"name":"CDG-Ib","type":"exact"},{"name":"CDG1B","type":"exact"},{"name":"MPI-CDG","type":"exact"},{"name":"MPI-CDG (CDG-Ib)","type":"related"},{"name":"Mannosephosphate isomerase deficiency","type":"related"},{"name":"Mpi deficiency","type":"related"},{"name":"Protein-losing enteropathy-hepatic fibrosis syndrome","type":"related"},{"name":"SLSJ syndrome","type":"related"},{"name":"Saguenay Lac Saint Jean syndrome","type":"related"},{"name":"Saguenay-Lac Saint-Jean syndrome","type":"related"},{"name":"Slsj syndrome","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type IB","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1B","type":"related"},{"name":"congenital disorder of glycosylation type 1b","type":"exact"},{"name":"congenital disorder of glycosylation type IB","type":"exact"},{"name":"congenital disorder of glycosylation, type IB","type":"related"},{"name":"phosphomannose isomerase deficiency","type":"exact"}],"termid":"MONDO:0011257","terms_by_termid":{"MONDO:0011257":null},"xrefs":{"Monarch":{"xref_id":"0011257"}}}


id: GO:1901774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lincomycin.","definition_xrefs":["PMID:8577249","MetaCyc:PWY-6955","UniPathway:UPA00161","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside biosynthetic process","termid":"GO:0016144"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"lincomycin metabolic process","termid":"GO:1901772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"lincomycin biosynthetic process","synonyms":[{"name":"lincomycin anabolism","type":"exact"},{"name":"lincomycin biosynthesis","type":"exact"},{"name":"lincomycin formation","type":"exact"},{"name":"lincomycin synthesis","type":"exact"}],"termid":"GO:1901774"}


id: PBO:0091354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A histone chaperone Scm3","termid":"PBO:0091354"}


id: PBO:0071638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 2","termid":"PBO:0071638"}


id: MONDO:0007143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortic arch anomaly-peculiar facies-intellectual disability syndrome is a developmental anomaly characterized at birth by the presence of right-sided aortic arch, craniofacial dysmorphism (microcephaly, asymmetric, facial bones, broad forehead, borderline hypertelorism, nasal septum deviation, large nasal cavity, large, posteriorly rotated ears, and microstomia with downturned corners), and intellectual disability. These features were observed in 4 members of one family, involving 2 successive generations, suggesting an autosomal dominant mode of transmission. There have been no further descriptions in the literature since 1968.","definition_xrefs":["Orphanet:1110"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic arch anomaly-facial dysmorphism-intellectual disability syndrome","secondary_identifiers":["OMIM:107500","GARD:739","MEDGEN:350734","UMLS:C1862682","MESH:C537785"],"synonyms":[{"name":"aortic arch anomaly - peculiar facies - intellectual disability","type":"related"},{"name":"aortic arch anomaly with peculiar facies and intellectual disability","type":"related"},{"name":"aortic arch anomaly with peculiar facies and mental retardation","type":"related"},{"name":"aortic arch anomaly-peculiar facies-intellectual disability syndrome","type":"related"},{"name":"familial syndrome of right-sided aortic arch, mental deficiency, and facial dysmorphism","type":"related"}],"termid":"MONDO:0007143","xrefs":{"Monarch":{"xref_id":"0007143"}}}


id: MONDO:1012628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of progressive retinal atrophy that occurs in dogs due to a mutation in the RPGR gene and is characterized by normal photoreceptor morphogenesis, after which progressive rod–cone degeneration develops in the peripheral retina, gradually advancing toward the optic disc.","definition_xrefs":["PMID:32176262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked progressive retinal atrophy 1, RPGR-related, dog","secondary_identifiers":["OMIA:000831-9615"],"synonyms":[{"name":"XLPRA1","type":"exact"},{"name":"progressive retinal atrophy, X-linked, type 1, dog","type":"related"}],"termid":"MONDO:1012628","xrefs":{"Monarch":{"xref_id":"1012628"}}}


id: FYPO:0005688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, and morphology of astral microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytoplasmic microtubules during vegetative growth","termid":"FYPO:0001976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal astral microtubules","synonyms":[{"name":"normal astral microtubules during mitotic cell cycle","type":"related"},{"name":"normal astral microtubules during vegetative growth","type":"exact"},{"name":"normal cytoplasmic astral microtubules","type":"exact"}],"termid":"FYPO:0005688"}


id: PBO:0070567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 33","termid":"PBO:0070567"}


id: PBO:0055402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2832","termid":"PBO:0055402"}


id: GO:1903256
data:
  {"annotated_genes":["SJAG_00832","SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72692,105549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving selenoneine.","definition_xrefs":["PMID:24828577","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"},{"relation_name":"is_a","term_name":"modified histidine metabolic process","termid":"GO:0052701"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selenoneine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-selenoneine metabolic process","type":"narrow"},{"name":"selenoneine metabolism","type":"exact"}],"termid":"GO:1903256","terms_by_termid":{"GO:1903257":null}}


id: PBO:0042913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP8 and FADD like apoptosis regulator","termid":"PBO:0042913"}


id: MONDO:0008260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kindler syndrome (KS) is the fourth major type of epidermolysis bullosa (EB), besides simplex, junctional and dystrophic forms, and is characterized by skin fragility and blistering at birth followed by development of photosensitivity and progressive poikilodermatous skin changes.","definition_xrefs":["Orphanet:2908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited epidermolysis bullosa","termid":"MONDO:0019276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Kindler syndrome","secondary_identifiers":["SCTID:238836000","MESH:C536321","DOID:0060472","OMIM:173650","UMLS:C0406557","NANDO:1200239","icd11.foundation:726317303","GARD:4391","MEDGEN:96060"],"synonyms":[{"name":"KINDLER syndrome","type":"related"},{"name":"KNDLRS","type":"related"},{"name":"KS","type":"exact"},{"name":"Kindler syndrome","type":"exact"},{"name":"bullous acrokeratotic poikiloderma of Kindler and Weary","type":"related"},{"name":"congenital bullous poikiloderma","type":"related"},{"name":"poikiloderma of Kindler","type":"exact"},{"name":"poikiloderma, congenital, with bullae, Weary type","type":"related"},{"name":"poikiloderma, hereditary acrokeratotic","type":"related"}],"termid":"MONDO:0008260","xrefs":{"Monarch":{"xref_id":"0008260"}}}


id: MONDO:0008773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino aciduria with mental deficiency, dwarfism, muscular dystrophy, osteoporosis, and acidosis","secondary_identifiers":["OMIM:204730","MESH:C565960","MEDGEN:347955","UMLS:C1859818"],"synonyms":[{"name":"amino aciduria with mental deficiency, dwarfism, muscular dystrophy, osteoporosis and acidosis","type":"related"},{"name":"amino aciduria with mental deficiency, dwarfism, muscular dystrophy, osteoporosis, and acidosis","type":"exact"}],"termid":"MONDO:0008773","xrefs":{"Monarch":{"xref_id":"0008773"}}}


id: GO:0034936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,6-dichloro-3-methylcatechol + O2 = 3,5-dichloro-3-methyl-cis,cis-muconate + 2 H+.","definition_xrefs":["UM-BBD_reactionID:r0959"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,6-dichloro-3-methylcatechol 1,2-dioxygenase activity (obsolete GO:0034936)","termid":"GO:0034936"}


id: GO:0019575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose, catalyzed by the enzyme beta-fructofuranosidase (EC:3.2.1.26).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using beta-fructofuranosidase (obsolete GO:0019575)","synonyms":[{"name":"sucrose breakdown, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolic process, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolism, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose degradation, using beta-fructofuranosidase","type":"exact"}],"termid":"GO:0019575"}


id: PBO:0119673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone Cox1101/ mitochondrial ribosome assembly protein Rsm22 fusion protein","termid":"PBO:0119673"}


id: PBO:0061593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTRK3 antisense RNA 1","termid":"PBO:0061593"}


id: PBO:0086861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative SCF ubiquitin ligase F-box protein; interacts physically with both Cdc53p and Skp1 and genetically with CDC34; similar to putative F-box protein YDR131C","termid":"PBO:0086861"}


id: MONDO:1011476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis multiplex congenita that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita, non-human animal","termid":"MONDO:1011455"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita, sheep","secondary_identifiers":["OMIA:001465-9940"],"termid":"MONDO:1011476","xrefs":{"Monarch":{"xref_id":"1011476"}}}


id: PBO:0110981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 7A (JohnMiltonHagen blood group)","termid":"PBO:0110981"}


id: PBO:0046589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 31","termid":"PBO:0046589"}


id: PBO:0039482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A5, pseudogene","termid":"PBO:0039482"}


id: GO:0071192
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv channel interacting protein KChIP1 associated with the channel via interaction with the Kv alpha subunit 4.2.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"Kv4.2-KChIP1 channel complex","secondary_identifiers":["CORUM:606"],"termid":"GO:0071192"}


id: FYPO:0000372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of RNA modification is decreased. All RNA modification may be decreased, or one or more specific RNA modifications may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA modification","synonyms":[{"name":"RNA modification: decreased","type":"related"},{"name":"decreased RNA modification during mitotic cell cycle","type":"related"},{"name":"decreased RNA modification during vegetative growth","type":"exact"},{"name":"reduced RNA modification","type":"exact"}],"termid":"FYPO:0000372"}


id: PBO:0068311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF13 pseudogene 1","termid":"PBO:0068311"}


id: PBO:0026771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_uracil_import","termid":"PBO:0026771"}


id: PBO:0087978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNAHis guanylyltransferase; adds a guanosine residue to the 5' end of tRNAH is after transcription and RNase P cleavage; can also catalyze reverse (3'-5') polymerization with certain substrates in a template-dependent reaction; couples nuclear division and migration to cell budding and cytokinesis; essential enzyme conserved among eukaryotes","termid":"PBO:0087978"}


id: FYPO:0005415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during anaphase of the first meiotic nuclear division is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during meiosis I","termid":"FYPO:0005413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during meiotic anaphase I","synonyms":[{"name":"increased protein accumulation during meiotic anaphase I","type":"related"},{"name":"increased protein level during first meiotic anaphase","type":"exact"}],"termid":"FYPO:0005415"}


id: FYECO:0000258
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which arsenate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ arsenate","termid":"FYECO:0000258"}


id: GO:0046142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of coenzyme and prosthetic group metabolic process (obsolete GO:0046142)","synonyms":[{"name":"negative regulation of coenzyme and prosthetic group metabolic process","type":"exact"}],"termid":"GO:0046142"}


id: PBO:0002644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 h4.1","termid":"PBO:0002644"}


id: PBO:0047573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor binding protein 1","termid":"PBO:0047573"}


id: PBO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_UV","termid":"PBO:0036089"}


id: PBO:0063014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 2B","termid":"PBO:0063014"}


id: PBO:0066475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase pseudogene 2","termid":"PBO:0066475"}


id: GO:0004791
data:
  {"annotated_genes":["SJAG_03653","SJAG_04399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75025,81438],"is_not":false,"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: thioredoxin-dithiol + NADP+ = thioredoxin-disulfide + H+ + NADPH.","definition_xrefs":["RHEA:20345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"protein-disulfide reductase [NAD(P)H] activity","termid":"GO:0047134"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03653":null,"SJAG_04399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0015036","GO:0016491"],"is_obsolete":false,"name":"thioredoxin-disulfide reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9617735","Reactome:R-HSA-1222485","MetaCyc:THIOREDOXIN-REDUCT-NADPH-RXN","EC:1.8.1.9","KEGG_REACTION:R02016","Reactome:R-HSA-3323050","Reactome:R-HSA-73646"],"synonyms":[{"name":"NADPH:oxidized thioredoxin oxidoreductase activity","type":"exact"},{"name":"thioredoxin disulfide reductase activity","type":"broad"},{"name":"thioredoxin reductase (NADPH) activity","type":"exact"},{"name":"thioredoxin-disulfide reductase (NADP) activity","type":"exact"},{"name":"thioredoxin-disulfide reductase activity","type":"broad"},{"name":"thioredoxin-disulphide reductase activity","type":"broad"}],"termid":"GO:0004791","terms_by_termid":{"GO:0004791":null}}


id: MONDO:0043904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of LEISHMANIASIS, CUTANEOUS caused by Leishmania aethiopica in Ethiopia and Kenya, L. pifanoi in Venezuela, L. braziliensis in South America, and L. mexicana in Central America. This disease is characterized by massive dissemination of skin lesions without visceral involvement.","definition_xrefs":["MESH:D016774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous leishmaniasis","termid":"MONDO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"leishmaniasis, diffuse cutaneous","secondary_identifiers":["SCTID:38573008","UMLS:C0085311","MEDGEN:39020"],"synonyms":[{"name":"Leishmaniases, diffuse cutaneous","type":"related"},{"name":"cheloid leishmaniasis","type":"related"},{"name":"cutaneous Leishmaniases, diffuse","type":"related"},{"name":"cutaneous leishmaniasis, diffuse","type":"related"},{"name":"dcl - diffuse cutaneous leishmaniasis","type":"related"},{"name":"diffuse cutaneous Leishmaniases","type":"related"},{"name":"diffuse cutaneous leishmaniasis","type":"exact"},{"name":"leproid leishmaniasis","type":"related"},{"name":"lepromatous cutaneous leishmaniasis","type":"related"}],"termid":"MONDO:0043904","xrefs":{"Monarch":{"xref_id":"0043904"}}}


id: MONDO:0200001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chromate resistance (obsolete MONDO:0200001)","secondary_identifiers":["OMIM:118840"],"synonyms":[{"name":"CHR","type":"related"},{"name":"CHROMATE RESISTANCE","type":"related"}],"termid":"MONDO:0200001","xrefs":{"Monarch":{"xref_id":"0200001"}}}


id: MONDO:0060564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"HELIX syndrome","secondary_identifiers":["MEDGEN:1621482","GARD:17967","Orphanet:528105","OMIM:617671","UMLS:C4522164"],"synonyms":[{"name":"HELIX","type":"exact"},{"name":"HELIX syndrome","type":"exact"},{"name":"hypohidrosis, electrolyte imbalance, lacrimal gland dysfunction, ichthyosis, and xerostomia","type":"related"},{"name":"hypohidrosis-electrolyte imbalance-lacrimal gland dysfunction-ichthyosis-xerostomia syndrome","type":"exact"}],"termid":"MONDO:0060564","xrefs":{"Monarch":{"xref_id":"0060564"}}}


id: GO:0044464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a cell, the basic structural and functional unit of all organisms.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell part (obsolete GO:0044464)","synonyms":[{"name":"cellular subcomponent","type":"exact"},{"name":"protoplast","type":"related"}],"termid":"GO:0044464"}


id: MONDO:0005197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that affects the thymus. Representative examples include thymoma and carcinoma.","definition_xrefs":["NCIT:C3412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"},{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"},{"relation_name":"is_a","term_name":"thymus gland disorder","termid":"MONDO:0003393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymus neoplasm","secondary_identifiers":["SCTID:127231009","UMLS:C3714644","GARD:19767","MEDGEN:811424","Orphanet:100100","ICD9:239.89","ONCOTREE:THYMUS","EFO:0002626"],"synonyms":[{"name":"THYMUS","type":"related"},{"name":"Thymus neoplasm","type":"exact"},{"name":"Thymus tumor","type":"exact"},{"name":"Thymus tumour","type":"exact"},{"name":"neoplasm of Thymus","type":"exact"},{"name":"neoplasm of the Thymus","type":"exact"},{"name":"neoplasm of thymus","type":"exact"},{"name":"thymic neoplasm","type":"exact"},{"name":"thymic tumor","type":"exact"},{"name":"thymic tumour","type":"exact"},{"name":"thymus neoplasm (disease)","type":"exact"},{"name":"thymus tumor","type":"exact"},{"name":"thymus tumour","type":"exact"},{"name":"tumor of Thymus","type":"exact"},{"name":"tumor of the Thymus","type":"exact"},{"name":"tumor of thymus","type":"exact"},{"name":"tumour of Thymus","type":"exact"},{"name":"tumour of the Thymus","type":"exact"},{"name":"tumour of thymus","type":"exact"}],"termid":"MONDO:0005197","xrefs":{"Monarch":{"xref_id":"0005197"}}}


id: MOD:01464
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to an L-methioninium (protonated L-methionine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-methionine (L-methioninium) residue","termid":"MOD:01464"}


id: PBO:0087040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L19B; rpl19a and rpl19b single null mutations result in slow growth, while the double null mutation is lethal; homologous to mammalian ribosomal protein L19, no bacterial homolog; RPL19B has a paralog, RPL19A, that arose from the whole genome duplication","termid":"PBO:0087040"}


id: PBO:0071399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 5","termid":"PBO:0071399"}


id: PBO:0058725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6853","termid":"PBO:0058725"}


id: PBO:0006202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_product_or_complex","termid":"PBO:0006202"}


id: PBO:0044878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND5B antisense RNA 1","termid":"PBO:0044878"}


id: GO:0090482
data:
  {"annotated_genes":["SJAG_00835","SJAG_02962","SJAG_03503","SJAG_02779","SJAG_04673","SJAG_02780","SJAG_03652","SJAG_05175"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73559,81032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[75662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[102588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[74241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[105561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[91997,91996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a vitamin from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03503":null,"SJAG_03652":null,"SJAG_04673":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"vitamin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051183"],"synonyms":[{"name":"vitamin or cofactor transporter activity","type":"broad"},{"name":"vitamin transporter activity","type":"related"}],"termid":"GO:0090482","terms_by_termid":{"GO:0008517":null,"GO:0015225":null,"GO:0015233":null,"GO:0015234":null,"GO:0034216":null,"GO:0090422":null}}


id: GO:1905177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a tracheary element.","definition_xrefs":["GO_REF:0000086","PMID:20659276","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheary element differentiation","termid":"GO:1905177"}


id: PBO:0079835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-5 netrin receptor A","termid":"PBO:0079835"}


id: PBO:0079310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 4C","termid":"PBO:0079310"}


id: GO:0102083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydromonapterin = glycolaldehyde + 2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-ol.","definition_xrefs":["PMID:15107504","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"7,8-dihydromonapterin aldolase activity","secondary_identifiers":["MetaCyc:RXN-10857"],"termid":"GO:0102083"}


id: FYPO:0001307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of long-chain fatty acid-CoA ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"decreased lcfa-ligase activity","type":"exact"},{"name":"reduced long-chain fatty acid-CoA ligase activity","type":"exact"}],"termid":"FYPO:0001307"}


id: PBO:0088900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, involved in mitochondrial gene expression","termid":"PBO:0088900"}


id: FYECO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were first nitrogen starved at standard growth temperature, and then transferred to a rich medium at high temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen starvation at normal temperature and shift to high temperature in rich medium","termid":"FYECO:0000292"}


id: MONDO:0006768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Narrowing of the pyloric lumen caused either by hypertrophy of the surrounding muscles or tissue scarring due to a chronic peptic ulcer.","definition_xrefs":["NCIT:C34966"],"gene_count":0,"genotype_count":0,"name":"obsolete gastric outlet obstruction (obsolete MONDO:0006768)","termid":"MONDO:0006768","xrefs":{"Monarch":{"xref_id":"0006768"}}}


id: FYPO:0000603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of G1 phase of a mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1 phase progression","termid":"FYPO:0000602"},{"relation_name":"is_a","term_name":"decreased duration of mitotic cell cycle phase","termid":"FYPO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased duration of mitotic G1 phase","synonyms":[{"name":"decreased duration of G1 phase during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic G1 phase during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: decreased duration","type":"related"},{"name":"reduced duration of mitotic G1 phase","type":"exact"}],"termid":"FYPO:0000603"}


id: MONDO:0017703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"},{"relation_name":"is_a","term_name":"peroxisomal single enzyme/protein defect","termid":"MONDO:0100257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"disorder of glyoxylate metabolism","secondary_identifiers":["MEDGEN:1842247","Orphanet:308998","GARD:21312","UMLS:C5681070","icd11.foundation:1800430868"],"synonyms":[{"name":"disorder of glyoxylate metabolism","type":"exact"}],"termid":"MONDO:0017703","xrefs":{"Monarch":{"xref_id":"0017703"}}}


id: MONDO:0015903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant genetic condition caused by mutation(s) in the CETP gene, encoding cholesteryl ester transfer protein. Affected individuals may have increased longevity due to decreased risk of coronary heart disease.","definition_xrefs":["NCIT:C128806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperlipidemia","termid":"MONDO:0021187"},{"relation_name":"is_a","term_name":"hyperlipoproteinemia","termid":"MONDO:0037748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperalphalipoproteinemia","secondary_identifiers":["MEDGEN:87465","Orphanet:181428","SCTID:238080004","UMLS:C0342883","ICD9:272.4","GARD:20230","icd11.foundation:1599779547"],"synonyms":[{"name":"HALP1","type":"exact"}],"termid":"MONDO:0015903","xrefs":{"Monarch":{"xref_id":"0015903"}}}


id: PBO:0042182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1 interacting protein 1 pseudogene 2","termid":"PBO:0042182"}


id: MONDO:0004445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of bladder adenocarcinoma characterized by the presence of malignant glandular epithelial cells and clear cells forming a papillary pattern.","definition_xrefs":["NCIT:C39848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder clear cell adenocarcinoma","termid":"MONDO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder papillary clear cell adenocarcinoma","secondary_identifiers":["DOID:8051","UMLS:C1511196","MEDGEN:307286"],"synonyms":[{"name":"bladder papillary clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0004445","xrefs":{"Monarch":{"xref_id":"0004445"}}}


id: PBO:0074238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 50 member 1","termid":"PBO:0074238"}


id: GO:0033952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,4-beta-D-linkages between D-galactose 4-sulfate and 3,6-anhydro-D-galactose-2-sulfate in iota-carrageenans.","definition_xrefs":["EC:3.2.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"iota-carrageenase activity","secondary_identifiers":["MetaCyc:3.2.1.157-RXN"],"synonyms":[{"name":"iota-carrageenan 4-beta-D-glycanohydrolase (configuration-inverting) activity","type":"related"}],"termid":"GO:0033952"}


id: PBO:0029308
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spheroid_cell_during_G0","termid":"PBO:0029308"}


id: PBO:0060971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYB pseudogene 1","termid":"PBO:0060971"}


id: GO:0034934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-4-carboxylate + 2 H+ + 2 e- + O2 = cis-3,4-phenanthrenedihydrodiol-4-carboxylate.","definition_xrefs":["UM-BBD_reactionID:r0939"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-4-carboxylate dioxygenase activity (obsolete GO:0034934)","termid":"GO:0034934"}


id: PBO:0057658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1250","termid":"PBO:0057658"}


id: PBO:0075296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol O-acyltransferase 1","termid":"PBO:0075296"}


id: SO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is localized outside of a lipid bilayer.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"},{"relation_name":"part_of","term_name":"membrane_structure","termid":"SO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"extramembrane_polypeptide_region","secondary_identifiers":["BS:00154"],"synonyms":[{"name":"extramembrane","type":"related"},{"name":"extramembrane polypeptide region","type":"exact"},{"name":"extramembrane_region","type":"related"},{"name":"topo_dom","type":"related"}],"termid":"SO:0001072"}


id: PBO:0002489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor (predicted)","termid":"PBO:0002489"}


id: PBO:0069474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 741, pseudogene","termid":"PBO:0069474"}


id: GO:1901572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving chemical substance.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical substance metabolic process (obsolete GO:1901572)","synonyms":[{"name":"chemical substance metabolic process","type":"exact"},{"name":"chemical substance metabolism","type":"exact"}],"termid":"GO:1901572"}


id: PBO:0055355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2784","termid":"PBO:0055355"}


id: PBO:0028808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_genetic_imprinting_at_mating-type_locus","termid":"PBO:0028808"}


id: GO:0072562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A phospholipid microvesicle that is derived from any of several cell types, such as platelets, blood cells, endothelial cells, or others, and contains membrane receptors as well as other proteins characteristic of the parental cell. Microparticles are heterogeneous in size, and are characterized as microvesicles free of nucleic acids.","definition_xrefs":["PMID:16373184","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"blood microparticle","synonyms":[{"name":"cell membrane microparticle","type":"exact"}],"termid":"GO:0072562"}


id: GO:0002554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a platelet or group of platelets.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion involved in inflammatory response","termid":"GO:0002442"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"platelet degranulation","termid":"GO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"serotonin secretion by platelet","synonyms":[{"name":"serotonin release by platelet","type":"related"}],"termid":"GO:0002554"}


id: PR:Q9UU82
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- are2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol O-acyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.05c","synonyms":[{"name":"Spom972h-are2","type":"exact"},{"name":"sterol-ester synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU82"}


id: PR:000050398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has not been phosphorylated at positions equivalent to Thr-75 and Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75/Thr-78, PR:000026291.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:23333317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut12/UnPhos(T75,T78)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"PomBase_original_PRO_term_name: spindle pole body-associated protein cut12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cut12/UnPhos:1","type":"exact"},{"name":"UniProtKB:O59755, Thr-75/Thr-78, PR:000026291","type":"narrow"},{"name":"cut12/UnPhos(T75,T78)","type":"exact"}],"termid":"PR:000050398"}


id: FYPO:0000992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3-phosphate measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered cellular phosphatidylinositol-3-phosphate level","synonyms":[{"name":"abnormal cellular phosphatidylinositol-3-phosphate level","type":"exact"},{"name":"altered PI-3-P accumulation","type":"related"},{"name":"altered cellular PI(3)P level","type":"exact"},{"name":"altered cellular PI-3-P level","type":"exact"},{"name":"altered cellular phosphatidylinositol-3-phosphate level during mitotic cell cycle","type":"related"},{"name":"altered cellular phosphatidylinositol-3-phosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0000992"}


id: MONDO:0004218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor arising from brain during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood central nervous system germ cell tumor","termid":"MONDO:0003750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood germ cell brain tumor","secondary_identifiers":["DOID:7430","NANDO:2200108","UMLS:C1377598","MEDGEN:277987","NCIT:C5795"],"synonyms":[{"name":"Brain germ cell tumor","type":"exact"},{"name":"Brain germ cell tumour","type":"exact"},{"name":"childhood brain germ cell neoplasm","type":"exact"},{"name":"childhood brain germ cell tumor","type":"exact"},{"name":"childhood brain germ cell tumour","type":"exact"},{"name":"childhood germ cell brain neoplasm","type":"exact"},{"name":"germ cell neoplasm of childhood brain","type":"exact"},{"name":"germ cell neoplasm of paediatric brain","type":"exact"},{"name":"germ cell neoplasm of pediatric brain","type":"exact"},{"name":"germ cell neoplasm of the childhood brain","type":"exact"},{"name":"germ cell neoplasm of the paediatric brain","type":"exact"},{"name":"germ cell neoplasm of the pediatric brain","type":"exact"},{"name":"germ cell tumor of childhood brain","type":"exact"},{"name":"germ cell tumor of pediatric brain","type":"exact"},{"name":"germ cell tumor of the childhood brain","type":"exact"},{"name":"germ cell tumor of the pediatric brain","type":"exact"},{"name":"germ cell tumour of childhood brain","type":"exact"},{"name":"germ cell tumour of paediatric brain","type":"exact"},{"name":"germ cell tumour of the childhood brain","type":"exact"},{"name":"germ cell tumour of the paediatric brain","type":"exact"},{"name":"paediatric brain germ cell neoplasm","type":"exact"},{"name":"paediatric brain germ cell tumour","type":"exact"},{"name":"pediatric brain germ cell neoplasm","type":"exact"},{"name":"pediatric brain germ cell tumor","type":"exact"}],"termid":"MONDO:0004218","xrefs":{"Monarch":{"xref_id":"0004218"}}}


id: PBO:0027233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_midzone","termid":"PBO:0027233"}


id: GO:0051036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle size","termid":"GO:0097494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endosome size","synonyms":[{"name":"endosome enlargement","type":"related"}],"termid":"GO:0051036"}


id: PBO:0053768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1013","termid":"PBO:0053768"}


id: MONDO:0023008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete drachtman weinblatt sitarz syndrome (obsolete MONDO:0023008)","termid":"MONDO:0023008","xrefs":{"Monarch":{"xref_id":"0023008"}}}


id: PBO:0058841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8071-1","termid":"PBO:0058841"}


id: PBO:0076651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBX5 antisense RNA 1","termid":"PBO:0076651"}


id: PBO:0004020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor Mbx1","termid":"PBO:0004020"}


id: MONDO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of cellular proliferation (obsolete MONDO:0002001)","termid":"MONDO:0002001","xrefs":{"Monarch":{"xref_id":"0002001"}}}


id: PBO:0080143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle amine transport 1","termid":"PBO:0080143"}


id: GO:0045640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of basophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte differentiation","termid":"GO:0030852"},{"relation_name":"regulates","term_name":"basophil differentiation","termid":"GO:0030221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of basophil differentiation","termid":"GO:0045640"}


id: PBO:0012556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIn Suppressing","termid":"PBO:0012556"}


id: GO:0009879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or a part of an organism such that it is symmetric around a central axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"},{"relation_name":"part_of","term_name":"radial pattern formation","termid":"GO:0009956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of radial symmetry","synonyms":[{"name":"determination of radial asymmetry","type":"exact"}],"termid":"GO:0009879"}


id: PBO:0065483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 2","termid":"PBO:0065483"}


id: GO:0030689
data:
  {"annotated_genes":["SJAG_01494","SJAG_04346","SJAG_01275","SJAG_00311","SJAG_03654","SJAG_00838"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74646,81979,99773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030690"},{"annotations":[114423,74647,81980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030691"},{"annotations":[74593,80464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030692"}]},"cv_name":"cellular_component","definition":"Any of several heterodimers containing one or two Noc proteins, associated with preribosomal complexes; involved in ribosome biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_00838":null,"SJAG_01275":null,"SJAG_01494":null,"SJAG_03654":null,"SJAG_04346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Noc complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030689","terms_by_termid":{"GO:0030690":null,"GO:0030691":null,"GO:0030692":null}}


id: GO:2001259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cation channel activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cation channel activity","synonyms":[{"name":"positive regulation of cation diffusion facilitator activity","type":"exact"},{"name":"positive regulation of nonselective cation channel activity","type":"exact"}],"termid":"GO:2001259"}


id: GO:1902204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatocyte growth factor receptor signaling pathway.","definition_xrefs":["PMID:18819921","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of hepatocyte growth factor receptor signaling pathway","termid":"GO:1902202"},{"relation_name":"positively_regulates","term_name":"hepatocyte growth factor receptor signaling pathway","termid":"GO:0048012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of hepatocyte growth factor receptor signaling pathway","synonyms":[{"name":"activation of HGF receptor signaling pathway","type":"exact"},{"name":"activation of HGF receptor signalling pathway","type":"exact"},{"name":"activation of Met signaling pathway","type":"narrow"},{"name":"activation of hepatocyte growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of HGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of HGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of Met signaling pathway","type":"narrow"},{"name":"up regulation of HGF receptor signaling pathway","type":"exact"},{"name":"up regulation of HGF receptor signalling pathway","type":"exact"},{"name":"up regulation of Met signaling pathway","type":"narrow"},{"name":"up regulation of hepatocyte growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of HGF receptor signaling pathway","type":"exact"},{"name":"up-regulation of HGF receptor signalling pathway","type":"exact"},{"name":"up-regulation of Met signaling pathway","type":"narrow"},{"name":"up-regulation of hepatocyte growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of HGF receptor signaling pathway","type":"exact"},{"name":"upregulation of HGF receptor signalling pathway","type":"exact"},{"name":"upregulation of Met signaling pathway","type":"narrow"},{"name":"upregulation of hepatocyte growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:1902204"}


id: SO:0001177
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-base-paired sequence of three nucleotide bases in tRNA. It has sequence T-Psi-C.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_loop","synonyms":[{"name":"T loop","type":"exact"},{"name":"TpsiC loop","type":"exact"}],"termid":"SO:0001177"}


id: GO:0102739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A36 + O2 + 2-oxoglutarate = H+ + gibberellin A4 + succinate + 2 carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete (gibberellin-36), 2-oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102739)","termid":"GO:0102739"}


id: PATO:0005008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by low-crowned teeth. Human teeth are brachydont.","definition_xrefs":["DOI:10.1111/j.1469-185X.2011.00176.x"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydont","termid":"PATO:0005008"}


id: PBO:0111760
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family","termid":"PBO:0111760"}


id: PBO:0076873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 22","termid":"PBO:0076873"}


id: PBO:0080705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 8A","termid":"PBO:0080705"}


id: PBO:0027913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027913"}


id: PATO:0001986
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's passing into solution.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solubility","termid":"PATO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissolved","termid":"PATO:0001986"}


id: PBO:0078400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 10-1","termid":"PBO:0078400"}


id: PBO:0082661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; bridges interaction between Rna15p and Hrp1p in the CF I complex; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping and maintenance of genome stability; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082661"}


id: PR:Q9P6Q1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline synthase co-transcribed bacterial homolog protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01126","PANTHER:PTHR10146:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0001 protein C644.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.09","secondary_identifiers":["UniProtKB:Q9P6Q1"],"synonyms":[{"name":"Spom972h-PROSC","type":"exact"}],"termid":"PR:Q9P6Q1"}


id: GO:0051570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 methylation (obsolete GO:0051570)","termid":"GO:0051570"}


id: MONDO:0013180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 8","secondary_identifiers":["OMIM:613207","UMLS:C2750782","MEDGEN:442562"],"synonyms":[{"name":"ASRT8","type":"related"},{"name":"Rhinoconjunctivitis, susceptibility to","type":"related"},{"name":"asthma-RELATED traits, susceptibility to, 8","type":"related"},{"name":"asthma-related traits, susceptibility to, 8","type":"exact"}],"termid":"MONDO:0013180","xrefs":{"Monarch":{"xref_id":"0013180"}}}


id: PBO:0068105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 412","termid":"PBO:0068105"}


id: GO:1903231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A post-transcriptional repressor activity that acts by base-pairing with an mRNA to prevent gene expression. The binding can result in targeting the mRNA for degradation or interfering with mRNA translation resulting in post-transcriptional gene silencing.","definition_xrefs":["PMID:20533884","GOC:ha","GOC:BHF_miRNA","PMID:18197166","GOC:BHF","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific mRNA binding","termid":"GO:1990825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mRNA base-pairing post-transcriptional repressor activity","secondary_identifiers":["GO:0150100"],"synonyms":[{"name":"mRNA base-pairing posttranscriptional repressor activity","type":"exact"},{"name":"mRNA base-pairing translational repressor activity","type":"narrow"},{"name":"mRNA binding involved in PTGS","type":"related"},{"name":"mRNA binding involved in cosuppression","type":"related"},{"name":"mRNA binding involved in post-transcriptional gene silencing","type":"exact"},{"name":"mRNA binding involved in posttranscriptional gene silencing","type":"related"},{"name":"mRNA binding involved in quelling","type":"exact"},{"name":"mRNA binding translation repressor activity","type":"related"},{"name":"translational inhibitor activity via mRNA base-pairing","type":"narrow"}],"termid":"GO:1903231"}


id: GO:0071423
data:
  {"annotated_genes":["SJAG_01406","SJAG_02140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68913],"is_not":false,"summary":null,"term":"GO:0071423"},{"annotations":[103570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"}]},"cv_name":"biological_process","definition":"A process in which a malate ion is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transport","termid":"GO:0015743"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"malate transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"malate membrane transport","type":"exact"},{"name":"transmembrane malate transport","type":"exact"}],"termid":"GO:0071423","terms_by_termid":{"GO:0071423":null,"GO:0098714":null}}


id: PBO:0078354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 1-2","termid":"PBO:0078354"}


id: PBO:0114425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 7","termid":"PBO:0114425"}


id: GO:0070193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synaptonemal complex. A synaptonemal complex is a proteinaceous scaffold formed between homologous chromosomes during meiosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptonemal complex organization","synonyms":[{"name":"synaptonemal complex organisation","type":"exact"}],"termid":"GO:0070193"}


id: SO:1000055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The DNA mutation changes, usually destroys, the first coding triplet of a gene. Usually prevents translation although another initiator codon may be used.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000055 sequence_variant_causing_initiator_codon_change_in_transcript (obsolete SO:1000055)","synonyms":[{"name":"mutation causing initiator codon change in transcript","type":"related"},{"name":"sequence variant causing initiator codon change in transcript","type":"exact"}],"termid":"SO:1000055"}


id: PBO:0039480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A3, pseudogene","termid":"PBO:0039480"}


id: MONDO:0014308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A temporal lobe epilepsy that has material basis in variation in the chromosome region 3q25-q26.","definition_xrefs":["PMID:24021842","DOID:0060749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial temporal lobe epilepsy 6","secondary_identifiers":["OMIM:615697","GARD:18281","MEDGEN:816650","UMLS:C3810320"],"synonyms":[{"name":"ETL6","type":"exact"},{"name":"epilepsy, familial temporal lobe, 6","type":"related"},{"name":"familial temporal lobe epilepsy type 6","type":"exact"}],"termid":"MONDO:0014308","xrefs":{"Monarch":{"xref_id":"0014308"}}}


id: GO:0050017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + HCN = sulfide + L-3-cyanoalanine.","definition_xrefs":["EC:4.4.1.9","MetaCyc:L-3-CYANOALANINE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"L-3-cyanoalanine synthase activity","secondary_identifiers":["RHEA:17821"],"synonyms":[{"name":"L-cysteine hydrogen-sulfide-lyase (adding HCN)","type":"related"},{"name":"L-cysteine hydrogen-sulfide-lyase (adding hydrogen cyanide; L-3-cyanoalanine-forming)","type":"related"},{"name":"beta-cyano-L-alanine synthase activity","type":"related"},{"name":"beta-cyanoalanine synthase activity","type":"related"},{"name":"beta-cyanoalanine synthetase activity","type":"related"}],"termid":"GO:0050017"}


id: GO:0046948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"hydroxylysine metabolic process","termid":"GO:0046946"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"hydroxylysine catabolic process","synonyms":[{"name":"hydroxylysine breakdown","type":"exact"},{"name":"hydroxylysine catabolism","type":"exact"},{"name":"hydroxylysine degradation","type":"exact"}],"termid":"GO:0046948"}


id: PR:Q9Y7U9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cca2 gene.","definition_xrefs":["UniProtKB:Q9Y7U9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCA tRNA nucleotidyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.10","synonyms":[{"name":"CCA-adding enzyme 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cca2","type":"exact"},{"name":"tRNA CCA-pyrophosphorylase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA adenylyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA nucleotidyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7U9"}


id: MONDO:0007707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that involves the small intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of small intestine","termid":"MONDO:0021501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hemangiomas of small intestine","secondary_identifiers":["MEDGEN:331098","MESH:C564201","OMIM:140900","UMLS:C1841654"],"synonyms":[{"name":"hemangioma of small intestine","type":"exact"},{"name":"hemangiomas of small intestine","type":"exact"},{"name":"small intestine hemangioma","type":"exact"}],"termid":"MONDO:0007707","xrefs":{"Monarch":{"xref_id":"0007707"}}}


id: PBO:0073340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 2","termid":"PBO:0073340"}


id: GO:0016146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.48"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-synthesizing GTPase activity, initiation (obsolete GO:0016146)","synonyms":[{"name":"protein-synthesizing GTPase activity, initiation","type":"exact"}],"termid":"GO:0016146"}


id: PBO:0060567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 3","termid":"PBO:0060567"}


id: PBO:0059292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L43","termid":"PBO:0059292"}


id: PBO:0004128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof2","termid":"PBO:0004128"}


id: GO:0005132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interferon-type I receptor, a heterodimeric complex composed of an alpha subunit (IFNAR1) and a beta subunit (IFNAR2).","definition_xrefs":["PMID:17502368","GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type I interferon receptor binding","synonyms":[{"name":"IFNAR binding","type":"related"},{"name":"IFNAR1 binding","type":"narrow"},{"name":"IFNAR2 binding","type":"narrow"},{"name":"interferon-alpha/beta","type":"narrow"},{"name":"interferon-alpha/beta receptor binding","type":"exact"},{"name":"interferon-alpha/beta receptor ligand","type":"narrow"}],"termid":"GO:0005132"}


id: PBO:0026867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_centromere","termid":"PBO:0026867"}


id: PBO:0002979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine transporter (predicted)","termid":"PBO:0002979"}


id: GO:0045335
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"phagocytic vesicle","secondary_identifiers":["Wikipedia:Phagosome"],"synonyms":[{"name":"phagosome","type":"exact"}],"termid":"GO:0045335"}


id: PBO:0035989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cAMP","termid":"PBO:0035989"}


id: GO:0034046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence of guanine residues in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-purine tract binding","termid":"GO:0070717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"poly(G) binding","synonyms":[{"name":"poly(G) binding, within an RNA molecule","type":"exact"},{"name":"poly(rG) binding","type":"exact"}],"termid":"GO:0034046"}


id: PBO:0055168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2591","termid":"PBO:0055168"}


id: GO:1904677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of somatic stem cell division.","definition_xrefs":["PMID:19409607","GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell division","termid":"GO:1904675"},{"relation_name":"positively_regulates","term_name":"somatic stem cell division","termid":"GO:0048103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic stem cell division","synonyms":[{"name":"activation of somatic stem cell division","type":"narrow"},{"name":"activation of somatic stem cell renewal","type":"narrow"},{"name":"positive regulation of somatic stem cell renewal","type":"exact"},{"name":"up regulation of somatic stem cell division","type":"exact"},{"name":"up regulation of somatic stem cell renewal","type":"exact"},{"name":"up-regulation of somatic stem cell division","type":"exact"},{"name":"up-regulation of somatic stem cell renewal","type":"exact"},{"name":"upregulation of somatic stem cell division","type":"exact"},{"name":"upregulation of somatic stem cell renewal","type":"exact"}],"termid":"GO:1904677"}


id: PBO:0075268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 21","termid":"PBO:0075268"}


id: GO:0021832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of cells to one another to form groups of cells involved in cerebral cortex tangential migration.","definition_xrefs":["GOC:jid","PMID:12626695","GOC:dph","GOC:dgh","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion involved in cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021832"}


id: GO:0160241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a cardiolipin + NAD+ = a diphosphatidylglycerone + NADH + H+.","definition_xrefs":["RHEA:81091","PMID:26338420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cardiolipin dehydrogenase (NAD+) activity","termid":"GO:0160241"}


id: PBO:0063250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha subfamily C, 1","termid":"PBO:0063250"}


id: PBO:0059857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methenyltetrahydrofolate synthetase domain containing","termid":"PBO:0059857"}


id: GO:1903237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte tethering or rolling.","definition_xrefs":["GOC:als","GOC:TermGenie","PMID:18308860","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular extravasation","termid":"GO:0002692"},{"relation_name":"is_a","term_name":"regulation of leukocyte tethering or rolling","termid":"GO:1903236"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904995"},{"relation_name":"negatively_regulates","term_name":"leukocyte tethering or rolling","termid":"GO:0050901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte tethering or rolling","synonyms":[{"name":"down regulation of leukocyte tethering or rolling","type":"exact"},{"name":"down-regulation of leukocyte tethering or rolling","type":"exact"},{"name":"downregulation of leukocyte tethering or rolling","type":"exact"},{"name":"inhibition of leukocyte tethering or rolling","type":"narrow"}],"termid":"GO:1903237"}


id: MONDO:0009807
data:
  {"annotated_genes":["SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"}]},"cv_name":"mondo","definition":"A usually aggressive malignant bone-forming mesenchymal neoplasm, predominantly affecting adolescents and young adults. It usually involves bones and less frequently extraosseous sites. It often involves the long bones (particularly distal femur, proximal tibia, and proximal humerus). Pain with or without a palpable mass is the most frequent clinical symptom. It may spread to other anatomic sites, particularly the lungs.","definition_xrefs":["NCIT:C9145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"osteosarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0029463","EFO:0000637","HP:0002669","MESH:D012516","ICDO:9180/3","MEDGEN:10501","ONCOTREE:OS","NANDO:2200048","DOID:3347"],"synonyms":[{"name":"bone tissue neoplasm","type":"broad"},{"name":"osteogenic sarcoma","type":"exact"},{"name":"osteoid sarcoma","type":"exact"},{"name":"osteosarcoma","type":"exact"},{"name":"osteosarcoma (disease)","type":"exact"},{"name":"osteosarcoma, malignant","type":"exact"},{"name":"sarcoma of osteoid","type":"exact"}],"termid":"MONDO:0009807","terms_by_termid":{"MONDO:0002629":null},"xrefs":{"Monarch":{"xref_id":"0009807"}}}


id: GO:0046286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavonoid phytoalexins, a group of water-soluble phenolic derivatives containing a flavan skeleton, which possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid catabolic process","termid":"GO:0046275"},{"relation_name":"is_a","term_name":"flavonoid phytoalexin metabolic process","termid":"GO:0046285"},{"relation_name":"is_a","term_name":"phytoalexin catabolic process","termid":"GO:0052316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0098754"],"is_obsolete":false,"name":"flavonoid phytoalexin catabolic process","synonyms":[{"name":"flavonoid phytoalexin breakdown","type":"exact"},{"name":"flavonoid phytoalexin catabolism","type":"exact"},{"name":"flavonoid phytoalexin degradation","type":"exact"}],"termid":"GO:0046286"}


id: MONDO:0013607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"GATA2 deficiency with susceptibility to MDS/AML","termid":"MONDO:0042982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"monocytopenia with susceptibility to infections","secondary_identifiers":["UMLS:C3280030","OMIM:614172","GARD:10934","DOID:0111947","icd11.foundation:1077753382","MEDGEN:481660","Orphanet:228423"],"synonyms":[{"name":"DCML","type":"related"},{"name":"Dendritic cell, monocyte, B and NK lymphoid deficiency","type":"exact"},{"name":"Dendritic cell, monocyte, B lymphocyte, and natural Killer lymphocyte deficiency","type":"related"},{"name":"GATA2 deficiency","type":"related"},{"name":"IMD21","type":"related"},{"name":"MonoMAC","type":"exact"},{"name":"combined immunodeficiency with susceptibility to mycobacterial, viral and fungal infections","type":"exact"},{"name":"combined immunodeficiency with susceptibility to mycobacterial, viral, and fungal infections","type":"related"},{"name":"immunodeficiency 21","type":"related"},{"name":"immunodeficiency type 21","type":"exact"},{"name":"monocyte - B - natural killer - dendritic cell deficiency","type":"related"},{"name":"monocyte-B-natural killer-dendritic cell deficiency syndrome","type":"exact"},{"name":"monocytopenia and mycobacterial infection syndrome","type":"exact"},{"name":"monocytopenia with susceptibility to mycobacterial, fungal, and Papillomavirus infections and myelodysplasia","type":"related"}],"termid":"MONDO:0013607","xrefs":{"Monarch":{"xref_id":"0013607"}}}


id: GO:0090153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of membrane lipid metabolic process","termid":"GO:1905038"},{"relation_name":"regulates","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006629"],"is_obsolete":false,"name":"regulation of sphingolipid biosynthetic process","termid":"GO:0090153"}


id: MONDO:1012573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pyknodysostosis, non-human animal","termid":"MONDO:1011973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyknodysostosis, domestic cat","secondary_identifiers":["OMIA:002607-9685"],"termid":"MONDO:1012573","xrefs":{"Monarch":{"xref_id":"1012573"}}}


id: GO:0070539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to linoleic acid, the 18-carbon unsaturated fatty acid (9Z,12Z)-octadeca-9,12-dienoic acid.","definition_xrefs":["GOC:lp","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"linoleic acid binding","termid":"GO:0070539"}


id: FYPO:0000806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which Golgi organization is abnormal. Golgi organization results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus.","definition_xrefs":["GO:0007030","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal Golgi organization","synonyms":[{"name":"abnormal Golgi organisation","type":"exact"},{"name":"abnormal Golgi organization during mitotic cell cycle","type":"related"},{"name":"abnormal Golgi organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000806"}


id: GO:2001110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lens epithelial cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lens epithelial cell proliferation","termid":"GO:2001109"},{"relation_name":"negatively_regulates","term_name":"lens epithelial cell proliferation","termid":"GO:0097166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lens epithelial cell proliferation","termid":"GO:2001110"}


id: PR:P78789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5'-AMP-activated protein kinase subunit beta-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04986","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1919.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.03c","secondary_identifiers":["UniProtKB:P78789"],"synonyms":[{"name":"Spom972h-PRKAB2","type":"exact"}],"termid":"PR:P78789"}


id: PBO:0003448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidyl-N-methylethanolamine N-methyltransferase (predicted)","termid":"PBO:0003448"}


id: GO:0008273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + K+(in) + Na+(out) = Ca2+(out) + K+(out) + Na+(in).","definition_xrefs":["TC:2.A.19.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:sodium antiporter activity","termid":"GO:0005432"},{"relation_name":"is_a","term_name":"solute:potassium antiporter activity","termid":"GO:0022821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"calcium, potassium:sodium antiporter activity","secondary_identifiers":["Reactome:R-HSA-5626270","Reactome:R-HSA-5626356","RHEA:69967","Reactome:R-HSA-5625841","Reactome:R-HSA-5626316","Reactome:R-HSA-2514891","Reactome:R-HSA-425678"],"synonyms":[{"name":"potassium-dependent sodium/calcium exchanger","type":"related"}],"termid":"GO:0008273"}


id: PBO:0043339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN8 antisense RNA 1","termid":"PBO:0043339"}


id: PR:Q10271
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arb2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.07","synonyms":[{"name":"Spom972h-arb2","type":"exact"}],"termid":"PR:Q10271"}


id: PBO:0109939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, splicosomal Prp16","termid":"PBO:0109939"}


id: PBO:0005484
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id: PBO:0082948
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id: GO:0033737
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-pyrroline + NAD+ + 2 H2O = 4-aminobutanoate + NADH + 2 H+.","definition_xrefs":["MetaCyc:1.5.1.35-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-pyrroline dehydrogenase activity (obsolete GO:0033737)","synonyms":[{"name":"1-pyrroline:NAD+ oxidoreductase activity","type":"related"},{"name":"ABALDH","type":"related"},{"name":"YdcW","type":"related"},{"name":"gamma-aminobutyraldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0033737"}


id: PR:P27584
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id: PBO:0001143
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id: PBO:0035773
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id: GO:0045885
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id: GO:0010342
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The separation of the multi-nucleate endosperm into individual cells. In many plant species, the endosperm that nurtures the embryo in the seed initially develops as a syncytium. This syncytial phase ends with simultaneous partitioning of the multi-nucleate cytoplasm into individual cells, a process referred to as cellularization.","definition_xrefs":["PMID:12421698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularization","termid":"GO:0007349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosperm cellularization","synonyms":[{"name":"cellularization of endosperm","type":"exact"}],"termid":"GO:0010342"}


id: SO:0001147
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id: GO:0097643
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id: PBO:0034654
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id: GO:0060483
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id: MONDO:1010984
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id: MONDO:0009292
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id: GO:0043500
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id: GO:0016747
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id: PBO:0084684
data:
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id: GO:0099562
data:
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