# terms

id: PBO:0069975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1270, pseudogene","termid":"PBO:0069975"}


id: GO:1901680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of sulfur-containing amino acid from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfur-containing amino acid secondary active transmembrane transporter activity (obsolete GO:1901680)","termid":"GO:1901680"}


id: FYPO:0004692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle","termid":"FYPO:0002966"},{"relation_name":"is_a","term_name":"normal protein localization to spindle","termid":"FYPO:0007865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during mitotic cell cycle","type":"related"},{"name":"normal protein localization to mitotic spindle midzone during vegetative growth","type":"exact"}],"termid":"FYPO:0004692"}


id: PBO:0005732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L22 (predicted)","termid":"PBO:0005732"}


id: GO:0140064
data:
  {"annotated_genes":["SJAG_02990","SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93270,100868],"is_not":false,"summary":null,"term":"GO:0140064"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: crotonyl-CoA + lysine in peptide = CoA + N-crotonyl-lysine-peptide.","definition_xrefs":["PMID:25818647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02773":null,"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptide crotonyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:53908"],"synonyms":[{"name":"protein crotonyltransferase activity","type":"related"}],"termid":"GO:0140064","terms_by_termid":{"GO:0140064":null}}


id: GO:0061656
data:
  {"annotated_genes":["SJAG_00604","SJAG_02082"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77464,106411],"is_not":false,"summary":null,"term":"GO:0061656"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of SUMO from one protein to another via the reaction X-SUMO + Y = Y-SUMO + X, where both the X-SUMO and Y-SUMO linkages are thioester bonds between the C-terminal amino acid of SUMO and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO transferase activity","termid":"GO:0019789"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_02082":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0019787","GO:0016746","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"SUMO conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061656","terms_by_termid":{"GO:0061656":null}}


id: PBO:0086112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for bud growth; involved in transport of cell wall components from the Golgi to the cell surface; SBE2 has a paralog, SBE22, that arose from the whole genome duplication","termid":"PBO:0086112"}


id: MONDO:0029133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, limb-girdle, autosomal dominant","termid":"MONDO:0015151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"muscular dystrophy, limb-girdle, autosomal dominant 4","secondary_identifiers":["ICD10CM:G71.0","OMIM:618129","UMLS:C4748295","MEDGEN:1648316","Orphanet:565909"],"synonyms":[{"name":"LGMD type D4","type":"exact"},{"name":"LGMD1I","type":"exact"},{"name":"LGMDD4","type":"exact"},{"name":"calpain-3-related LGMD D4","type":"exact"},{"name":"calpain-3-related limb-girdle muscular dystrophy D4","type":"exact"},{"name":"limb-girdle muscular dystrophy type D4","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal dominant 4","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 1I","type":"exact"}],"termid":"MONDO:0029133","xrefs":{"Monarch":{"xref_id":"0029133"}}}


id: GO:0062213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peroxynitrite = nitrate.","definition_xrefs":["PMID:30524950","RHEA:63116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peroxynitrite isomerase activity","termid":"GO:0062213"}


id: PBO:0005015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Enp2 (predicted)","termid":"PBO:0005015"}


id: GO:0052547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidase activity, the hydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidase activity","synonyms":[{"name":"peptidase regulator activity","type":"related"}],"termid":"GO:0052547"}


id: MONDO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Involuntary movements of the eye that are divided into two types, jerk and pendular. Jerk nystagmus has a slow phase in one direction followed by a corrective fast phase in the opposite direction, and is usually caused by central or peripheral vestibular dysfunction. Pendular nystagmus features oscillations that are of equal velocity in both directions and this condition is often associated with visual loss early in life. (Adams et al., Principles of Neurology, 6th ed, p272)","definition_xrefs":["MESH:D009759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pathologic nystagmus","termid":"MONDO:0004843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spontaneous ocular nystagmus","secondary_identifiers":["SCTID:45339001","UMLS:C0271384","MEDGEN:75748","DOID:11771","ICD9:379.53","ICD10CM:H55.03"],"synonyms":[{"name":"ocular nystagmus","type":"exact"},{"name":"searching eye movements","type":"exact"},{"name":"visual deprivation nystagmus","type":"exact"}],"termid":"MONDO:0001361","xrefs":{"Monarch":{"xref_id":"0001361"}}}


id: MONDO:0018683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noninherited ichthyosis associated with malignancy; autoimmune, inflammatory, nutritional, metabolic, infectious, and neurologic diseases; or medications.","definition_xrefs":["PMID:20643494"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ichthyosis vulgaris","termid":"MONDO:0024304"},{"relation_name":"is_a","term_name":"ichthyosis","termid":"MONDO:0019269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acquired ichthyosis","secondary_identifiers":["SCTID:8691004","Orphanet:454","MESH:C538175","UMLS:C0263386","ICD10CM:L85.0","icd11.foundation:1504032289","GARD:476","NCIT:C112831","MEDGEN:78092"],"synonyms":[{"name":"acquired ichthyosis","type":"exact"},{"name":"acquired ichthyosis (disease)","type":"exact"},{"name":"fish scale disease, acquired","type":"related"},{"name":"ichthyosis acquisita","type":"exact"},{"name":"ichthyosis, acquired","type":"related"}],"termid":"MONDO:0018683","xrefs":{"Monarch":{"xref_id":"0018683"}}}


id: PBO:0057832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3150a","termid":"PBO:0057832"}


id: PBO:0116677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 8B","termid":"PBO:0116677"}


id: MONDO:0015474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intestinal infection with organisms of the genus Cryptosporidium. It occurs in both animals and humans. Symptoms include severe diarrhea.","definition_xrefs":["MESH:D003457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coccidiosis","termid":"MONDO:0005707"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cryptosporidiosis","secondary_identifiers":["MedDRA:10011502","MEDGEN:41362","Orphanet:1549","UMLS:C0010418","DOID:1733","icd11.foundation:1837013982","ICD10CM:A07.2","SCTID:66160001","NCIT:C128408","ICD9:007.4"],"synonyms":[{"name":"Cryptosporidial gastroenteritis","type":"exact"},{"name":"Cryptosporidioses","type":"related"},{"name":"Cryptosporidium caused disease or disorder","type":"exact"},{"name":"Cryptosporidium disease or disorder","type":"exact"},{"name":"Cryptosporidium infection","type":"exact"},{"name":"Cryptosporidium infectious disease","type":"exact"},{"name":"infection by Cryptosporidium","type":"exact"},{"name":"intestinal cryptosporidiosis","type":"exact"}],"termid":"MONDO:0015474","xrefs":{"Monarch":{"xref_id":"0015474"}}}


id: SO:0001279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1,2'-O-dimethylinosine is a modified inosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_inosine","termid":"SO:0001274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_two_prime_O_dimethylinosine","secondary_identifiers":["RNAMOD:019"],"synonyms":[{"name":"1,2'-O-dimethylinosine","type":"exact"},{"name":"m'Im","type":"exact"},{"name":"one two prime O dimethylinosine","type":"exact"}],"termid":"SO:0001279"}


id: FYPO:0004321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"altered DNA level","termid":"FYPO:0004320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered DNA level during vegetative growth","synonyms":[{"name":"abnormal DNA content during vegetative growth","type":"exact"},{"name":"abnormal DNA level during vegetative growth","type":"exact"},{"name":"altered DNA content during vegetative growth","type":"exact"},{"name":"altered DNA level during mitotic cell cycle","type":"related"},{"name":"altered cellular DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004321"}


id: PR:000027506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc25 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase inducer phosphatase","pombase_gene_id":"SPAC24H6.05","synonyms":[{"name":"CDC25","type":"related"},{"name":"MIH1","type":"related"},{"name":"Mitosis initiation protein","type":"exact"},{"name":"P80","type":"exact"},{"name":"cdc25","type":"exact"}],"termid":"PR:000027506"}


id: PBO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 9","termid":"PBO:0046848"}


id: FYPO:0003234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin domains is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at heterochromatin domain during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at HOOD during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at heterochromatin domain during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at heterochromatin domain during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"}],"termid":"FYPO:0003234"}


id: MONDO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrodysostosis (obsolete MONDO:0002005)","termid":"MONDO:0002005","xrefs":{"Monarch":{"xref_id":"0002005"}}}


id: PBO:0071654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 18","termid":"PBO:0071654"}


id: PBO:0083923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fructose-1,6-bisphosphatase; key regulatory enzyme in the gluconeogenesis pathway, required for glucose metabolism; undergoes either proteasome-mediated or autophagy-mediated degradation depending on growth conditions; glucose starvation results in redistribution to the periplasm; interacts with Vid30p","termid":"PBO:0083923"}


id: PBO:0116407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar/ prevavuolar endosome sodium/potassium ion/proton antiporter Nhx1","termid":"PBO:0116407"}


id: GO:0008967
data:
  {"annotated_genes":["SJAG_03108"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77558],"is_not":false,"summary":null,"term":"GO:0008967"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phosphoglycolate + H2O = glycolate + phosphate.","definition_xrefs":["RHEA:14369","EC:3.1.3.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"phosphoglycolate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01334","MetaCyc:GPH-RXN"],"synonyms":[{"name":"2-phosphoglycolate phosphatase activity","type":"related"},{"name":"2-phosphoglycolate phosphohydrolase activity","type":"related"},{"name":"P-glycolate phosphatase activity","type":"related"},{"name":"phosphoglycolate hydrolase activity","type":"related"},{"name":"phosphoglycollate phosphatase activity","type":"related"}],"termid":"GO:0008967","terms_by_termid":{"GO:0008967":null}}


id: GO:0035376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a sterol into a cell or organelle. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["PMID:19793923","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sterol import","synonyms":[{"name":"sterol influx","type":"exact"},{"name":"sterol uptake","type":"exact"}],"termid":"GO:0035376"}


id: GO:1904170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bleb assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25651887","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"bleb assembly","termid":"GO:0032060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of bleb assembly","synonyms":[{"name":"regulation of cell blebbing","type":"exact"}],"termid":"GO:1904170"}


id: FYPO:0007833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is abnormal in regions containing protein-coding genes.","definition_xrefs":["PomBase:mah","PMID:31837996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in euchromatin","termid":"FYPO:0000854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal nucleosome positioning at protein-coding gene","synonyms":[{"name":"abnormal genic nucleosome positioning","type":"related"},{"name":"abnormal nucleosome positioning at protein coding gene","type":"exact"},{"name":"abnormal nucleosome positioning at protein-coding gene during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning at protein-coding gene during vegetative growth","type":"exact"},{"name":"abnormal nucleosome positioning over gene body","type":"related"},{"name":"abnormal nucleosome spacing at protein-coding gene","type":"exact"}],"termid":"FYPO:0007833"}


id: PBO:0029920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_squalene_level","termid":"PBO:0029920"}


id: PBO:0050965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon nu 1, pseudogene","termid":"PBO:0050965"}


id: FYPO:0007416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere maintenance, i.e. any process that contributes to the maintenance of proper telomeric length and structure, is abnormal during G0 phase.","definition_xrefs":["GO:0000723","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere maintenance","termid":"FYPO:0007415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal telomere maintenance during G0","synonyms":[{"name":"abnormal telomere maintenance during cell quiescence","type":"exact"},{"name":"abnormal telomere maintenance during quiescence","type":"exact"}],"termid":"FYPO:0007416"}


id: PBO:0038585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acyltransferase 2","termid":"PBO:0038585"}


id: PBO:0078864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC7 antisense RNA 1","termid":"PBO:0078864"}


id: PBO:0071413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 19","termid":"PBO:0071413"}


id: PBO:0113757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, OB fold, predicted role in DNA metabolism","termid":"PBO:0113757"}


id: PBO:0071600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 17","termid":"PBO:0071600"}


id: GO:0048281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of inflorescences are generated and organized. An inflorescence is the part of a seed plant body that is usually above ground and that can bear flowers.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"inflorescence development","termid":"GO:0010229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflorescence morphogenesis","termid":"GO:0048281"}


id: GO:1904538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycolytic process through fructose-6-phosphate.","definition_xrefs":["GOC:TermGenie","ISBN:0879010479","GO_REF:0000058","GOC:dph","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycolytic process","termid":"GO:0006110"},{"relation_name":"regulates","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0055086","GO:0005975","GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of glycolytic process through fructose-6-phosphate","secondary_identifiers":["Reactome:R-HSA-9634600"],"synonyms":[{"name":"regulation of glycolysis through fructose-6-phosphate","type":"exact"}],"termid":"GO:1904538"}


id: MONDO:0013993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pontocerebellar hypoplasia type 7 (PCH7) is a novel very rare form of pontocerebellar hypoplasia with unknown etiology and poor prognosis reported in four patients and is characterized clinically during the neonatal period by hypotonia, no palpable gonads, micropenis and from infancy by progressive microcephaly, apneic episodes, poor feeding, seizures and regression of penis. MRI demonstrates a pontocerebellar hypoplasia. PCH7 is expressed as PCH with 46,XY disorder of sex development in individuals with XY karyotype, and may be expressed as PCH only in individuals with XX karyotype.","definition_xrefs":["Orphanet:284339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 7","secondary_identifiers":["GARD:17315","DOID:0060276","OMIM:614969","UMLS:C3554226","MEDGEN:767140","SCTID:718605009"],"synonyms":[{"name":"PCH7","type":"exact"},{"name":"TOE1 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in TOE1","type":"exact"},{"name":"pontocerebellar hypoplasia, type 7","type":"related"},{"name":"pontocerebellar hypoplasia-46,XY disorder of sex development syndrome","type":"exact"}],"termid":"MONDO:0013993","xrefs":{"Monarch":{"xref_id":"0013993"}}}


id: MONDO:0008744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alar cartilages hypoplasia- coloboma- telecanthus is a very rare dysmorphic disorder characterized by hypoplasia and coloboma of the alar cartilages and telecanthus described in 2 sisters. No new cases with similar features have been reported since 1976.","definition_xrefs":["Orphanet:2007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alar cartilages hypoplasia-coloboma-telecanthus syndrome","secondary_identifiers":["OMIM:203000","MEDGEN:348504","MESH:C535967","UMLS:C1859964","GARD:588"],"synonyms":[{"name":"alar-nasal cartilages, coloboma of, with telecanthus","type":"related"},{"name":"coloboma of alar-nasal cartilages with telecanthus","type":"related"},{"name":"frontonasal dysplasia with alar clefts","type":"related"}],"termid":"MONDO:0008744","xrefs":{"Monarch":{"xref_id":"0008744"}}}


id: PBO:0003869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transporting ATPase Ccc2 (predicted)","termid":"PBO:0003869"}


id: PBO:0052692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16","termid":"PBO:0052692"}


id: PBO:0091651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase","termid":"PBO:0091651"}


id: GO:0004276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of mature proteins from their proproteins by cleavage of the terminal bond of Arg-Xaa-Yaa-Arg-Z motifs where Xaa can be any amino acid and Yaa is Arg or Lys. Releases albumin, complement component C3 and von Willebrand factor from their respective precursors.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete furin activity (obsolete GO:0004276)","synonyms":[{"name":"PACE","type":"related"},{"name":"SPC3","type":"related"},{"name":"dibasic processing enzyme activity","type":"related"},{"name":"furin activity","type":"exact"},{"name":"paired basic amino acid cleaving enzyme","type":"related"},{"name":"paired basic amino acid converting enzyme","type":"related"},{"name":"paired basic amino acid residue cleaving enzyme activity","type":"related"},{"name":"prohormone convertase activity","type":"narrow"},{"name":"serine proteinase PACE","type":"related"}],"termid":"GO:0004276"}


id: GO:0048799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an animal organ to attain its fully functional state. An organ is a tissue or set of tissues that work together to perform a specific function or functions.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ maturation","termid":"GO:0048799"}


id: GO:1904968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation.","definition_xrefs":["PMID:23770679","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051987"},{"relation_name":"is_a","term_name":"regulation of spindle attachment to meiosis I kinetochore","termid":"GO:1904967"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"spindle attachment to meiosis I kinetochore","termid":"GO:0051455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of spindle attachment to meiosis I kinetochore","synonyms":[{"name":"activation of attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"activation of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"narrow"},{"name":"activation of attachment of spindle microtubules to kinetochore involved in meiosis I","type":"narrow"},{"name":"activation of monopolar attachment","type":"narrow"},{"name":"activation of sister kinetochore mono-orientation","type":"narrow"},{"name":"positive regulation of attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"positive regulation of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"positive regulation of attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"positive regulation of monopolar attachment","type":"exact"},{"name":"positive regulation of sister kinetochore mono-orientation","type":"exact"},{"name":"up regulation of attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"up regulation of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"up regulation of attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"up regulation of monopolar attachment","type":"exact"},{"name":"up regulation of sister kinetochore mono-orientation","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"up-regulation of monopolar attachment","type":"exact"},{"name":"up-regulation of sister kinetochore mono-orientation","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"upregulation of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"upregulation of monopolar attachment","type":"exact"},{"name":"upregulation of sister kinetochore mono-orientation","type":"exact"}],"termid":"GO:1904968"}


id: MONDO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from the ampulla of Vater. Morphologically, it is characterized by the presence of mucin-containing signet-ring cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct signet ring cell carcinoma","termid":"MONDO:0002664"},{"relation_name":"is_a","term_name":"ampulla of vater adenocarcinoma","termid":"MONDO:0002670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"ampullary signet ring cell adenocarcinoma","secondary_identifiers":["MEDGEN:231057","NCIT:C6656","DOID:3501","UMLS:C1332249"],"synonyms":[{"name":"ampulla of Vater signet Ring cell carcinoma","type":"exact"},{"name":"ampullary signet Ring cell carcinoma","type":"exact"},{"name":"ampullary signet ring cell carcinoma","type":"exact"}],"termid":"MONDO:0002669","xrefs":{"Monarch":{"xref_id":"0002669"}}}


id: PR:Q9USV3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf7 gene.","definition_xrefs":["UniProtKB:Q9USV3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.04c","synonyms":[{"name":"Spom972h-cwf7","type":"exact"},{"name":"complexed with cdc5 protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"splicing factor 27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USV3"}


id: GO:0042612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","GOC:jl","ISBN:0781735149","ISBN:0120781859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"MHC class I protein complex","termid":"GO:0042612"}


id: MONDO:1011936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthritis deformans, non-human animal","secondary_identifiers":["OMIA:000065"],"termid":"MONDO:1011936","xrefs":{"Monarch":{"xref_id":"1011936"}}}


id: FYPO:0004761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a greater extent than normal in regions of pericentric heterochromatin. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PMID:24095277","GO:0043486","GO:0005721","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"},{"relation_name":"is_a","term_name":"increased protein exchange at pericentric heterochromatin","termid":"FYPO:0006360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000641"],"is_obsolete":false,"name":"increased histone exchange at pericentric heterochromatin","synonyms":[{"name":"increased histone exchange at dh repeat","type":"narrow"},{"name":"increased histone exchange at pericentric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone exchange at pericentric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004761"}


id: MONDO:0800039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTND5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTND5","synonyms":[{"name":"MTND5 MELAS syndrome","type":"exact"}],"termid":"MONDO:0800039","xrefs":{"Monarch":{"xref_id":"0800039"}}}


id: PBO:0067110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 152, pseudogene","termid":"PBO:0067110"}


id: GO:0031874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 proteinase activated receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase activated receptor binding","termid":"GO:0031871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 3 proteinase activated receptor binding","synonyms":[{"name":"type 3 proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031874"}


id: GO:0140987
data:
  {"annotated_genes":["SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104778],"is_not":false,"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ATP from one side of a membrane to the other according to the reaction: ATP(out) + phosphate(in) = ATP(in) + phosphate(out).","definition_xrefs":["PMID:15123600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transmembrane transporter activity","termid":"GO:0005347"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00612":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ATP:phosphate antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:65840"],"synonyms":[{"name":"ATP:inorganic phosphate antiporter activity","type":"exact"},{"name":"inorganic phosphate:ATP antiporter activity","type":"exact"}],"termid":"GO:0140987","terms_by_termid":{"GO:0140987":null}}


id: PBO:0084803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; conserved in A. gossypii; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0084803"}


id: PBO:0050550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparanase 2 (inactive)","termid":"PBO:0050550"}


id: FYPO:0005421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is inviable and elongated, and progression through the mitotic cell cycle is arrested in interphase, during a cellular response to ultraviolet light. The cell contains no septum.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell with mitotic cell cycle arrest in interphase during cellular response to UV (obsolete FYPO:0005421)","synonyms":[{"name":"elongated inviable cell with mitotic cell cycle arrest in interphase during cellular response to UV during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell with mitotic cell cycle arrest in interphase during cellular response to UV","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest in interphase during cellular response to UV","type":"exact"},{"name":"inviable elongated vegetative cell with cell cycle arrest in interphase during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell with mitotic cell cycle arrest in interphase during cellular response to UV","type":"exact"},{"name":"mitotic interphase arrested elongated inviable vegetative cell during cellular response to UV","type":"exact"}],"termid":"FYPO:0005421"}


id: PR:Q10306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A citrate synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00965","PANTHER:PTHR11739:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.04","secondary_identifiers":["UniProtKB:Q10306"],"synonyms":[{"name":"Spom972h-CS","type":"exact"}],"termid":"PR:Q10306"}


id: PR:Q9P7Q8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmo25 gene.","definition_xrefs":["UniProtKB:Q9P7Q8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mo25-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.06c","synonyms":[{"name":"Spom972h-pmo25","type":"exact"}],"termid":"PR:Q9P7Q8"}


id: PR:O94250
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC13B11.03c gene.","definition_xrefs":["UniProtKB:O94250","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase C13B11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.03c","synonyms":[{"name":"Glx II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC13B11.03c","type":"exact"},{"name":"glyoxalase II (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94250"}


id: GO:0050195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + ATP = D-ribose 1,5-diphosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.18","RHEA:21216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"phosphoribokinase activity","secondary_identifiers":["MetaCyc:PHOSPHORIBOKINASE-RXN","KEGG_REACTION:R01050"],"synonyms":[{"name":"ATP:D-ribose-5-phosphate 1-phosphotransferase activity","type":"related"},{"name":"phosphoribokinase (phosphorylating)","type":"related"}],"termid":"GO:0050195"}


id: PBO:0055022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2437","termid":"PBO:0055022"}


id: PBO:0088159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Voltage-gated high-affinity calcium channel; involved in calcium influx in response to some environmental stresses as well as exposure to mating pheromones; interacts and partially co-localizes with Mid1p; however, evidence suggests CCH1 is not required for Mid1p function","termid":"PBO:0088159"}


id: PBO:0116814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoregulin","termid":"PBO:0116814"}


id: MONDO:1010437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiomyopathy that occurs in golden hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy, golden hamster","secondary_identifiers":["OMIA:000160-10036"],"termid":"MONDO:1010437","xrefs":{"Monarch":{"xref_id":"1010437"}}}


id: PBO:0052291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KHDC1 antisense RNA 1","termid":"PBO:0052291"}


id: GO:0045479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recruitment of vesicles to the fusome. The vesicles become the fusome tubule network and are necessary for the assembly of the fusome.","definition_xrefs":["PMID:9046244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"},{"relation_name":"part_of","term_name":"fusome organization","termid":"GO:0045478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"vesicle targeting to fusome","synonyms":[{"name":"vesicle-fusome targeting","type":"exact"}],"termid":"GO:0045479"}


id: PBO:0002403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-sugar phosphatase (predicted)","termid":"PBO:0002403"}


id: GO:1901083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving pyrrolizidine alkaloid.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00329"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrrolizidine alkaloid metabolic process (obsolete GO:1901083)","synonyms":[{"name":"pyrrolizidine alkaloid metabolism","type":"exact"}],"termid":"GO:1901083"}


id: PBO:0080239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 2","termid":"PBO:0080239"}


id: PBO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains CRE element","termid":"PBO:0001037"}


id: GO:0000974
data:
  {"annotated_genes":["SJAG_02227","SJAG_01408","SJAG_03993","SJAG_00639","SJAG_01810","SJAG_02078","SJAG_00911","SJAG_00414","SJAG_02844","SJAG_16453","SJAG_02722","SJAG_04898","SJAG_04694","SJAG_00446","SJAG_03711","SJAG_04783","SJAG_01504","SJAG_00094","SJAG_01214","SJAG_04117","SJAG_05349","SJAG_00859","SJAG_05212","SJAG_03601","SJAG_03687","SJAG_02304","SJAG_04497"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64977,65503,70001,71631,73571,73823,74909,75246,77868,79282,79720,79761,94159,98050,99569,100335,102595,104938,105112,109116,109595,111199,113263,113722,116986,117964,120924],"is_not":false,"summary":null,"term":"GO:0000974"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of Prp19 and associated proteins that is involved in the transition from the precatalytic spliceosome to the activated form that catalyzes step 1 of splicing, and which remains associated with the spliceosome through the second catalytic step. It is widely conserved, found in both yeast and mammals, though the exact composition varies. In S. cerevisiae, it contains Prp19p, Ntc20p, Snt309p, Isy1p, Syf2p, Cwc2p, Prp46p, Clf1p, Cef1p, and Syf1p.","definition_xrefs":["PMID:16540691","GOC:krc","PMID:19239890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00094":null,"SJAG_00414":null,"SJAG_00446":null,"SJAG_00639":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01214":null,"SJAG_01408":null,"SJAG_01504":null,"SJAG_01810":null,"SJAG_02078":null,"SJAG_02227":null,"SJAG_02304":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03601":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_03993":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_05212":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Prp19 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"MOS4-Associated Complex","type":"narrow"},{"name":"NTC","type":"related"},{"name":"Prp19/CDC5 complex","type":"narrow"},{"name":"nineteen complex","type":"narrow"}],"termid":"GO:0000974","terms_by_termid":{"GO:0000974":null}}


id: PBO:0069514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 783, pseudogene","termid":"PBO:0069514"}


id: GO:0106189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to the hydrolysis of a diphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to the hydrolysis of a diphosphate (obsolete GO:0106189)","termid":"GO:0106189"}


id: PBO:0091863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog Cbh2, domesticated transposable element","termid":"PBO:0091863"}


id: MONDO:0019908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 15 is a chromosome abnormality that affects growth, learning, and speech. People with ring chromosome 15 often have growth delays before and after birth, resulting in short stature; varying degrees of intellectual disability ; low muscle tone (hypotonia); craniofacial malformations; and limb abnormalities. Other symptoms might include congenital heart defects, kidney problems, congenital dislocation of the hips, and cafe-au-lait spots. Ring chromosome 15 is caused by an abnormal chromosome known as a ring chromosome 15 or r(15). A ring chromosome is a circular structure that occurs when a chromosome breaks in two places and the broken ends fuse together. The features of ring chromosome 15 appear to result from the loss (deletion) of genetic material from the long (q) arm of chromosome 15. Ring chromosome 15 is usually caused by spontaneous (de novo) errors very early in embryonic development. In rare cases, it is passed through families, either from a parent who also has a ring chromosome 15, or from a parent who has a balanced translocation. Treatment for ring chromosome 15 is focused on addressing the symptoms present in each individual and may require a team of medical specialists.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 15 disorder","termid":"MONDO:0700022"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 15","secondary_identifiers":["NORD:941","UMLS:C0795855","MEDGEN:1646359","MESH:C538035","GARD:1328","Orphanet:96177","SCTID:763405000"],"synonyms":[{"name":"Chromosome 15 Ring","type":"exact"},{"name":"R15","type":"related"},{"name":"Ring 15","type":"related"},{"name":"Ring chromosome 15 syndrome","type":"related"},{"name":"Ring chromosome type 15","type":"exact"},{"name":"chromosome 15 ring","type":"related"}],"termid":"MONDO:0019908","xrefs":{"Monarch":{"xref_id":"0019908"}}}


id: GO:1900843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of monodictyphenone biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"monodictyphenone biosynthetic process","termid":"GO:1900815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of monodictyphenone biosynthetic process","synonyms":[{"name":"regulation of monodictyphenone anabolism","type":"exact"},{"name":"regulation of monodictyphenone biosynthesis","type":"exact"},{"name":"regulation of monodictyphenone formation","type":"exact"},{"name":"regulation of monodictyphenone synthesis","type":"exact"}],"termid":"GO:1900843"}


id: FYPO:0000239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more MluI cell cycle box factor elements (MCBs) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription from MCB promoter","synonyms":[{"name":"expression of MBF target genes increased","type":"related"},{"name":"increased transcription from MCB promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from MCB promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0000239"}


id: FYPO:0001675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","termid":"FYPO:0001674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"increased alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0001675"}


id: PBO:0070537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 3","termid":"PBO:0070537"}


id: MONDO:0003177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoid cystic carcinoma that arises from the prostate gland.","definition_xrefs":["NCIT:C5539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"prostate adenocarcinoma","termid":"MONDO:0005082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate adenoid cystic carcinoma","secondary_identifiers":["DOID:4868","MEDGEN:233352","UMLS:C1335502"],"synonyms":[{"name":"adenoid cystic carcinoma of prostate","type":"exact"},{"name":"adenoid cystic carcinoma of the prostate","type":"exact"},{"name":"prostate adenoid cystic carcinoma","type":"exact"},{"name":"prostate gland adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0003177","xrefs":{"Monarch":{"xref_id":"0003177"}}}


id: MONDO:1012623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any X-linked tremor that occurs in dogs due to a mutation in the PLP1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tremor, dog","termid":"MONDO:1012279"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked canine shaking pup, PLP1-related, dog","secondary_identifiers":["OMIA:000770-9615"],"synonyms":[{"name":"SHP","type":"exact"},{"name":"tremor, X-linked, dog","type":"related"}],"termid":"MONDO:1012623","xrefs":{"Monarch":{"xref_id":"1012623"}}}


id: PBO:0087563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of spindle-assembly checkpoint complex; involved in delaying anaphase onset in cells with defects in mitotic spindle assembly; pseudosubstrate inhibitor of APC(Cdc20), the anaphase promoting complex involved in securin (Pds1p) turnover; MAD3 has a paralog, BUB1, that arose from the whole genome duplication","termid":"PBO:0087563"}


id: GO:0102122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A34 + S-adenosyl-L-methionine = gibberellin A34 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A34 carboxyl methyltransferase activity (obsolete GO:0102122)","termid":"GO:0102122"}


id: PBO:0026780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_salt_stress","termid":"PBO:0026780"}


id: PBO:0084648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Middle sporulation-specific mitogen-activated protein kinase (MAPK); required for prospore membrane development and the production of outer spore wall layers; negatively regulates activity of the glucan synthase subunit Gsc2p; activated by Cak1p-mediated phosphorylation of threonine (T207) in the activation loop during meiosis I followed by Ssp2p-promoted autophosphorylation of tyrosine (T209) during meiosis II","termid":"PBO:0084648"}


id: GO:1900485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein targeting to vacuolar membrane.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein targeting to membrane","termid":"GO:0090314"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuolar membrane","termid":"GO:1900483"},{"relation_name":"is_a","term_name":"positive regulation of vacuolar transport","termid":"GO:1903337"},{"relation_name":"positively_regulates","term_name":"protein targeting to vacuolar membrane","termid":"GO:0044395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"positive regulation of protein targeting to vacuolar membrane","synonyms":[{"name":"activation of protein targeting to vacuolar membrane","type":"narrow"},{"name":"up regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"up-regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"upregulation of protein targeting to vacuolar membrane","type":"exact"}],"termid":"GO:1900485"}


id: MONDO:1011052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, crab-eating macaque","secondary_identifiers":["OMIA:000807-9541"],"termid":"MONDO:1011052","xrefs":{"Monarch":{"xref_id":"1011052"}}}


id: GO:0004394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + heparan sulfate = adenosine 3',5'-bisphosphate + heparan sulfate 2-O-sulfate; results in 2-O-sulfation of iduronic acid residues in heparan sulfate.","definition_xrefs":["PMID:9153262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"heparan sulfate 2-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2076508","MetaCyc:RXN-11558"],"synonyms":[{"name":"heparan sulfate 2-O-sulfotransferase activity","type":"exact"},{"name":"heparan-sulfate 2-O-sulphotransferase activity","type":"exact"},{"name":"heparin 2-sulfotransferase activity","type":"related"},{"name":"heparin-sulphate 2-sulphotransferase activity","type":"related"}],"termid":"GO:0004394"}


id: PBO:0002717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein kinase regulatory subunit Atg13","termid":"PBO:0002717"}


id: MONDO:0006533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic lesion characterized by the proliferation of keratinizing squamous epithelium in the middle ear that results in the accumulation of keratin and cells. It is usually caused by repeated infections. If left untreated, it may increase in size and destroy the adjacent delicate bones of the middle ear.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear disorder","termid":"MONDO:0003276"},{"relation_name":"is_a","term_name":"cholesteatoma","termid":"MONDO:0006530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cholesteatoma of middle ear","secondary_identifiers":["ICD9:385.33","NCIT:C3654","SCTID:194339007","ICD9:385.3","ICD10CM:H71","MEDGEN:57836","UMLS:C0155490","EFO:1000678","icd11.foundation:2134365487","ICD9:385.32","MESH:D018424","DOID:10964"],"synonyms":[{"name":"Epidermosis of ear","type":"exact"},{"name":"Epidermosis of middle ear","type":"exact"},{"name":"cholesteatoma (disease) of middle ear","type":"exact"},{"name":"cholesteatoma of middle ear","type":"exact"},{"name":"cholesteatoma of middle ear and mastoid","type":"exact"},{"name":"cholesteatoma of middle ear and/or mastoid","type":"exact"},{"name":"cholesteatoma of the middle ear","type":"exact"},{"name":"middle ear cholesteatoma","type":"exact"},{"name":"middle ear cholesteatoma (disease)","type":"exact"},{"name":"unspecified cholesteatoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006533","xrefs":{"Monarch":{"xref_id":"0006533"}}}


id: PBO:0065608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 2","termid":"PBO:0065608"}


id: PBO:0089030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium transporting P-type ATPase P2 type, Pmc1","termid":"PBO:0089030"}


id: GO:0032755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-6 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-6 production","termid":"GO:0032675"},{"relation_name":"positively_regulates","term_name":"interleukin-6 production","termid":"GO:0032635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-6 production","secondary_identifiers":["GO:2000778","GO:0045410"],"synonyms":[{"name":"activation of interleukin-6 production","type":"narrow"},{"name":"positive regulation of IL-6 production","type":"exact"},{"name":"positive regulation of interleukin-6 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-6 secretion","type":"narrow"},{"name":"stimulation of interleukin-6 production","type":"narrow"},{"name":"up regulation of interleukin-6 production","type":"exact"},{"name":"up-regulation of interleukin-6 production","type":"exact"},{"name":"upregulation of interleukin-6 production","type":"exact"}],"termid":"GO:0032755"}


id: PBO:0034402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_downstream_target_(obsolete_has_downstream_target)","termid":"PBO:0034402"}


id: FYPO:0006991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a normal (i.e. indistinguishable from wild type) portion of the chromosome in regions containing protein-coding genes.","definition_xrefs":["GO:0031509","PomBase:mah","PMID:26518661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal spatial extent of heterochromatin assembly at protein coding gene","synonyms":[{"name":"normal spatial extent of heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"normal spatial extent of heterochromatin formation at protein coding gene","type":"exact"}],"termid":"FYPO:0006991"}


id: PBO:0083682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal Rab family GTPase; required for vacuolar protein sorting, endocytosis and multivesicular body (MVB) biogenesis and sorting; required for localization of the CORVET complex to endosomes; involved in autophagy and ionic stress tolerance; similar to Vps21p and Ypt53p; mammalian Rab5 homolog; protein abundance increases in response to DNA replication stress","termid":"PBO:0083682"}


id: PBO:0066976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 279","termid":"PBO:0066976"}


id: GO:1901361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of organic cyclic compound.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic cyclic compound catabolic process (obsolete GO:1901361)","synonyms":[{"name":"organic cyclic compound breakdown","type":"exact"},{"name":"organic cyclic compound catabolism","type":"exact"},{"name":"organic cyclic compound degradation","type":"exact"}],"termid":"GO:1901361"}


id: PBO:0077749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOLLIP divergent transcript","termid":"PBO:0077749"}


id: MONDO:0008069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leigh syndrome","termid":"MONDO:0009723"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005244"],"is_obsolete":false,"name":"necrotizing encephalomyelopathy, subacute, of Leigh, adult","secondary_identifiers":["UMLS:C1834340","MEDGEN:331718","OMIM:161700","MESH:C563530"],"synonyms":[{"name":"Leigh syndrome, adult","type":"related"},{"name":"necrotizing encephalomyelopathy, subacute, of Leigh, adult","type":"exact"}],"termid":"MONDO:0008069","xrefs":{"Monarch":{"xref_id":"0008069"}}}


id: PBO:0065476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 13","termid":"PBO:0065476"}


id: PBO:0034558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2B-K119_ubiquitination","termid":"PBO:0034558"}


id: PBO:0033831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centractin family actin-like protein Arp1","termid":"PBO:0033831"}


id: MOD:00336
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-aspartic acid residue and a two-iron two-sulfur cluster to tris-L-cysteinyl L-aspartato diiron disulfide.","definition_xrefs":["PubMed:10968624","PubMed:1312028","PubMed:7947772","RESID:AA0331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-aspartato diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"di-mu-sulfido(bis-S-cysteinyliron)(S-cysteinyl-O4-aspartatoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-aspartato diiron disulfide","type":"exact"}],"termid":"MOD:00336"}


id: CHEBI:57262
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-sn-phosphatidyl-L-serine(1−)","termid":"CHEBI:57262"}


id: PBO:0059947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 33","termid":"PBO:0059947"}


id: PBO:0049778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 11","termid":"PBO:0049778"}


id: PBO:0043963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma N","termid":"PBO:0043963"}


id: GO:0061529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of epinephrine by a cell in which the epinephrine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine secretion","termid":"GO:0048242"},{"relation_name":"is_a","term_name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"epinephrine secretion, neurotransmission","synonyms":[{"name":"adrenaline secretion, neurotransmission","type":"exact"}],"termid":"GO:0061529"}


id: PBO:0079151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN11 antisense RNA 1","termid":"PBO:0079151"}


id: SO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene segment which when incorporated by somatic recombination in the final gene transcript results in a nonfunctional product.","definition_xrefs":["SO:hd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_segment","termid":"SO:3000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_gene_segment","synonyms":[{"name":"pseudogenic gene segment","type":"exact"}],"termid":"SO:0001741"}


id: MONDO:0006093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the ascending colon. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C6427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon neuroendocrine tumor G1","termid":"MONDO:0006155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"ascending colon neuroendocrine tumor G1","secondary_identifiers":["UMLS:C1332340","MEDGEN:231386"],"synonyms":[{"name":"ascending colon NET G1","type":"exact"},{"name":"ascending colon carcinoid tumor","type":"exact"},{"name":"ascending colon carcinoid tumor (disease)","type":"exact"},{"name":"ascending colon carcinoid tumour","type":"exact"},{"name":"ascending colon carcinoid tumour (disease)","type":"exact"},{"name":"ascending colon neuroendocrine neoplasm G1","type":"exact"},{"name":"ascending colon neuroendocrine tumor G1","type":"exact"},{"name":"ascending colon neuroendocrine tumor, well differentiated, low grade","type":"exact"},{"name":"carcinoid tumor of ascending colon","type":"exact"},{"name":"carcinoid tumor of the ascending colon","type":"exact"},{"name":"carcinoid tumour of ascending colon","type":"exact"},{"name":"carcinoid tumour of the ascending colon","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of ascending colon","type":"exact"}],"termid":"MONDO:0006093","xrefs":{"Monarch":{"xref_id":"0006093"}}}


id: GO:0042712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Male behaviors associated with the care and rearing offspring.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paternal behavior","synonyms":[{"name":"paternal behaviour","type":"exact"}],"termid":"GO:0042712"}


id: MONDO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete LEOPARD syndrome (obsolete MONDO:0001937)","termid":"MONDO:0001937","xrefs":{"Monarch":{"xref_id":"0001937"}}}


id: PBO:0057593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 922","termid":"PBO:0057593"}


id: GO:1903678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cap-independent translational initiation.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cap-independent translational initiation","termid":"GO:1903677"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"negatively_regulates","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cap-independent translational initiation","synonyms":[{"name":"down regulation of cap-independent translational initiation","type":"exact"},{"name":"down-regulation of cap-independent translational initiation","type":"exact"},{"name":"downregulation of cap-independent translational initiation","type":"exact"},{"name":"inhibition of cap-independent translational initiation","type":"narrow"}],"termid":"GO:1903678"}


id: PBO:0029216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cell_wall","termid":"PBO:0029216"}


id: GO:0005608
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha1, beta2 and gamma1 polypeptide chains.","definition_xrefs":["MEDLINE:95005761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-3 complex","synonyms":[{"name":"laminin-121 complex","type":"exact"}],"termid":"GO:0005608"}


id: PBO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide 3-kinase family protein","termid":"PBO:0000247"}


id: GO:0099519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dense core granules along cytoskeletal fibers, such as microtubules or actin filaments.","definition_xrefs":["GOC:kmv","PMID:23358451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle cytoskeletal trafficking","termid":"GO:0099518"},{"relation_name":"is_a","term_name":"dense core granule transport","termid":"GO:1901950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"dense core granule cytoskeletal transport","synonyms":[{"name":"dense core vesicle cytoskeletal trafficking","type":"exact"}],"termid":"GO:0099519"}


id: FYPO:0003476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arsenate reductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal arsenate reductase activity","termid":"FYPO:0003475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased arsenate reductase activity","synonyms":[{"name":"reduced arsenate reductase activity","type":"exact"}],"termid":"FYPO:0003476"}


id: PBO:0038393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiplicity","termid":"PBO:0038393"}


id: GO:0097414
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic inclusion, 5 to 15 micrometers in diameter, with a dense core surrounded by a halo of 10 to 20 nm wide radially oriented alpha-synuclein fibrils.","definition_xrefs":["NIF_Subcellular:sao4749542545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"classical Lewy body","synonyms":[{"name":"brainstem Lewy body","type":"related"}],"termid":"GO:0097414"}


id: PBO:0069289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 545, pseudogene","termid":"PBO:0069289"}


id: PBO:0051746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 12","termid":"PBO:0051746"}


id: PBO:0065678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type Z2","termid":"PBO:0065678"}


id: GO:0005104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a fibroblast growth factor receptor (FGFR).","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"fibroblast growth factor receptor binding","secondary_identifiers":["GO:0001521","GO:0005162"],"synonyms":[{"name":"FGF receptor binding","type":"exact"},{"name":"FGFR binding","type":"exact"},{"name":"FGFR ligand","type":"narrow"},{"name":"fibroblast growth factor","type":"broad"},{"name":"fibroblast growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005104"}


id: MONDO:0018390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to sperm disorder (obsolete MONDO:0018390)","secondary_identifiers":["Orphanet:399771"],"termid":"MONDO:0018390","xrefs":{"Monarch":{"xref_id":"0018390"}}}


id: PBO:0055666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 2","termid":"PBO:0055666"}


id: MONDO:0043479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process caused by adenovirus. The virus may cause respiratory illness, conjunctivitis, gastroenteritis, and cystitis.","definition_xrefs":["NCIT:C115149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenoviridae infectious disease","secondary_identifiers":["SCTID:25225006","MESH:D000257","UMLS:C0001486","MEDGEN:1754"],"synonyms":[{"name":"Adenoviridae caused disease or disorder","type":"exact"},{"name":"Adenoviridae disease or disorder","type":"exact"},{"name":"Adenoviridae infection","type":"related"},{"name":"Adenoviridae infectious disease","type":"exact"},{"name":"adenoviridae infectious disease","type":"exact"},{"name":"adenovirus infection","type":"exact"},{"name":"adenovirus infections","type":"related"},{"name":"disease caused by adenovirus","type":"related"},{"name":"disease due to adenovirus","type":"exact"},{"name":"infection, Adenoviridae","type":"related"},{"name":"infection, adenovirus","type":"related"},{"name":"infections, Adenoviridae","type":"related"},{"name":"infections, adenovirus","type":"related"}],"termid":"MONDO:0043479","xrefs":{"Monarch":{"xref_id":"0043479"}}}


id: PBO:0047376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 7","termid":"PBO:0047376"}


id: MONDO:0019329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"microcystic lymphatic malformation","secondary_identifiers":["GARD:13020","MEDGEN:1843242","NCIT:C45485","icd11.foundation:1796778763","Orphanet:79490","UMLS:C4738056"],"synonyms":[{"name":"capillary lymphangioma","type":"related"},{"name":"capillary lymphatic malformation","type":"exact"},{"name":"cutaneous lymphangioma circumscriptum","type":"exact"},{"name":"microcystic infiltrating lymphatic malformation","type":"exact"},{"name":"microcystic lymphangioma","type":"exact"},{"name":"superficial lymphangioma","type":"exact"},{"name":"superficial lymphatic malformation","type":"exact"}],"termid":"MONDO:0019329","xrefs":{"Monarch":{"xref_id":"0019329"}}}


id: PBO:0119344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein O-mannosyltransferase Ogm2","termid":"PBO:0119344"}


id: PBO:0081257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 26","termid":"PBO:0081257"}


id: MONDO:0014026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital stationary night blindness in which the cause of the disease is a mutation in the LRIT3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"},{"relation_name":"is_a","term_name":"LRIT3-related retinopathy","termid":"MONDO:1040035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital stationary night blindness 1F","secondary_identifiers":["DOID:0110864","GARD:15899","MEDGEN:767313","OMIM:615058","UMLS:C3554399"],"synonyms":[{"name":"CSNB1F","type":"exact"},{"name":"LRIT3 congenital stationary night blindness","type":"exact"},{"name":"congenital stationary night blindness 1F autosomal recessive","type":"exact"},{"name":"congenital stationary night blindness caused by mutation in LRIT3","type":"exact"},{"name":"congenital stationary night blindness type 1F","type":"exact"},{"name":"night blindness, congenital stationary (complete), 1F, autosomal recessive","type":"exact"},{"name":"night blindness, congenital stationary, type 1F","type":"related"}],"termid":"MONDO:0014026","xrefs":{"Monarch":{"xref_id":"0014026"}}}


id: PBO:0047040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 106 member A","termid":"PBO:0047040"}


id: GO:1904969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a slow muscle cell from one site to another.","definition_xrefs":["PMID:25534553","GOC:TermGenie","GOC:ymb","GO_REF:0000091","PMID:14667409","PMID:15572133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell migration","termid":"GO:0110122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"slow muscle cell migration","synonyms":[{"name":"slow-twitch muscle cell migration","type":"exact"}],"termid":"GO:1904969"}


id: PBO:0039927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF28 pseudogene 1","termid":"PBO:0039927"}


id: PBO:0073337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 13, pseudogene","termid":"PBO:0073337"}


id: MOD:01332
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to 6x(13)C labeled L-leucine.","definition_xrefs":["PubMed:12716131","Unimod:188#L"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-leucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01332"}


id: GO:0075335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of symbiont adenylate cyclase-mediated signal transduction in response to host (obsolete GO:0075335)","termid":"GO:0075335"}


id: FYPO:0000952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuoles present in increased numbers","termid":"FYPO:0002790"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"vacuoles present in increased numbers during vegetative growth","synonyms":[{"name":"additional vacuoles present during vegetative growth","type":"exact"},{"name":"extra vacuoles during vegetative growth","type":"exact"},{"name":"vacuoles present in greater numbers during vegetative growth","type":"exact"},{"name":"vacuoles present in increased numbers during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000952"}


id: GO:1901630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of presynaptic membrane organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of presynaptic membrane organization","termid":"GO:1901629"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"presynaptic membrane organization","termid":"GO:0097090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of presynaptic membrane organization","synonyms":[{"name":"down regulation of presynaptic membrane organisation","type":"exact"},{"name":"down regulation of presynaptic membrane organization","type":"exact"},{"name":"down-regulation of presynaptic membrane organisation","type":"exact"},{"name":"down-regulation of presynaptic membrane organization","type":"exact"},{"name":"downregulation of presynaptic membrane organisation","type":"exact"},{"name":"downregulation of presynaptic membrane organization","type":"exact"},{"name":"inhibition of presynaptic membrane organisation","type":"narrow"},{"name":"inhibition of presynaptic membrane organization","type":"narrow"},{"name":"negative regulation of pre-synaptic membrane organization","type":"exact"},{"name":"negative regulation of presynaptic membrane organisation","type":"exact"}],"termid":"GO:1901630"}


id: MONDO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with perineal fistula (obsolete MONDO:0035780)","secondary_identifiers":["Orphanet:600952"],"termid":"MONDO:0035780","xrefs":{"Monarch":{"xref_id":"0035780"}}}


id: GO:0006193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ITP, inosine (5'-)triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate catabolic process","termid":"GO:0009207"},{"relation_name":"is_a","term_name":"ITP metabolic process","termid":"GO:0046041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ITP catabolic process","synonyms":[{"name":"ITP breakdown","type":"exact"},{"name":"ITP catabolism","type":"exact"},{"name":"ITP degradation","type":"exact"},{"name":"ITP hydrolysis","type":"exact"}],"termid":"GO:0006193"}


id: PBO:0064697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 33","termid":"PBO:0064697"}


id: MONDO:0010978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portal vein, cavernous transformation of","secondary_identifiers":["MEDGEN:331396","MESH:C563407","OMIM:601004","UMLS:C1832917"],"synonyms":[{"name":"portal vein, cavernous transformation of","type":"exact"}],"termid":"MONDO:0010978","xrefs":{"Monarch":{"xref_id":"0010978"}}}


id: FYPO:0004307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is longer than normal during metaphase.","definition_xrefs":["PMID:10398680","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"long mitotic spindle during metaphase","synonyms":[{"name":"elongated mitotic spindle during metaphase","type":"exact"},{"name":"increased mitotic spindle length during metaphase","type":"exact"},{"name":"long bipolar mitotic spindle during metaphase","type":"exact"},{"name":"long mitotic spindle during metaphase during vegetative growth","type":"exact"},{"name":"long mitotic spindles during metaphase","type":"exact"},{"name":"long spindle during metaphase of mitosis","type":"exact"},{"name":"long spindle during mitotic metaphase","type":"exact"}],"termid":"FYPO:0004307"}


id: PBO:0071804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reprimo like","termid":"PBO:0071804"}


id: GO:0007112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that occurs as part of the male meiotic cell cycle and results in the division of the cytoplasm of a cell to produce two daughter cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cytokinesis","termid":"GO:0033206"},{"relation_name":"part_of","term_name":"male meiotic nuclear division","termid":"GO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"male meiosis cytokinesis","synonyms":[{"name":"cytokinesis after male meiosis","type":"exact"},{"name":"cytokinesis involved in male meiotic cell cycle","type":"exact"}],"termid":"GO:0007112"}


id: MONDO:1011691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet function defect, non-human animal","secondary_identifiers":["OMIA:000803"],"termid":"MONDO:1011691","xrefs":{"Monarch":{"xref_id":"1011691"}}}


id: GO:0003390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a dendrite over time by the attachment of a part of the neuron to an anchor and the subsequent migration of the cell body away from the anchor point.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde extension","termid":"GO:0003389"},{"relation_name":"is_a","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite development by retrograde extension","synonyms":[{"name":"dendrite retrograde extension","type":"exact"}],"termid":"GO:0003390"}


id: GO:0010899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of phosphatidylcholine catabolism. Phosphatidylcholine catabolic processes are the chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid catabolic process","termid":"GO:0060696"},{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"regulates","term_name":"phosphatidylcholine catabolic process","termid":"GO:0034638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidylcholine catabolic process","termid":"GO:0010899"}


id: GO:0009748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by hexose and independent of hexokinase.","definition_xrefs":["GOC:mah","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose mediated signaling","termid":"GO:0009757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"hexokinase-independent signaling","synonyms":[{"name":"hexokinase-independent signalling","type":"exact"}],"termid":"GO:0009748"}


id: PBO:0038923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G5","termid":"PBO:0038923"}


id: PBO:0055050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2465","termid":"PBO:0055050"}


id: GO:0019338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentachlorophenol metabolic process","termid":"GO:0018961"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentachlorophenol catabolic process","secondary_identifiers":["MetaCyc:PCPDEG-PWY"],"synonyms":[{"name":"pentachlorophenol breakdown","type":"exact"},{"name":"pentachlorophenol catabolism","type":"exact"},{"name":"pentachlorophenol degradation","type":"exact"}],"termid":"GO:0019338"}


id: GO:0072523
data:
  {"annotated_genes":["SJAG_04870","SJAG_04334","SJAG_02785","SJAG_02959","SJAG_02945","SJAG_02580","SJAG_02247","SJAG_03903","SJAG_03091","SJAG_00461","SJAG_05287","SJAG_02135","SJAG_02481","SJAG_02796","SJAG_06622","SJAG_03660","SJAG_01997","SJAG_00839","SJAG_01310","SJAG_03828","SJAG_05314","SJAG_00685","SJAG_04297","SJAG_06621","SJAG_00605","SJAG_00027","SJAG_04495","SJAG_04048","SJAG_04299","SJAG_01359","SJAG_03373","SJAG_02009","SJAG_00957","SJAG_04192","SJAG_04487","SJAG_04927","SJAG_02107","SJAG_02369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[89415,89414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[118382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[79634,74209,107395,111361,105563,111365,118353,107766,105304,100159,107396,111362,99888,111363,111364,111366,111360,107394,107765,96400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[79824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[100886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[90442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[69626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[74167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[74169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[77929,74861],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[93635,75397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006145"},{"annotations":[92926,77048,114157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[71772],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[75396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019628"},{"annotations":[73990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a purine-containing compound, i.e. any compound that contains purine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01997":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02580":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02959":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04927":null,"SJAG_05287":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"purine-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine and derivative catabolic process","type":"exact"},{"name":"purine-containing compound breakdown","type":"exact"},{"name":"purine-containing compound catabolism","type":"exact"},{"name":"purine-containing compound degradation","type":"exact"}],"termid":"GO:0072523","terms_by_termid":{"GO:0006110":null,"GO:0006145":null,"GO:0006147":null,"GO:0006152":null,"GO:0006154":null,"GO:0006198":null,"GO:0006742":null,"GO:0009115":null,"GO:0015938":null,"GO:0019628":null,"GO:0019677":null,"GO:0035863":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:1901911":null}}


id: GO:1903291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATP catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:10636900","GOC:rl","GOC:BHF","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ATP catabolic process (obsolete GO:1903291)","synonyms":[{"name":"activation of ATP breakdown","type":"narrow"},{"name":"activation of ATP catabolic process","type":"narrow"},{"name":"activation of ATP catabolism","type":"narrow"},{"name":"activation of ATP degradation","type":"narrow"},{"name":"activation of ATP hydrolysis","type":"narrow"},{"name":"positive regulation of ATP breakdown","type":"exact"},{"name":"positive regulation of ATP catabolism","type":"exact"},{"name":"positive regulation of ATP degradation","type":"exact"},{"name":"positive regulation of ATP hydrolysis","type":"narrow"},{"name":"up regulation of ATP breakdown","type":"exact"},{"name":"up regulation of ATP catabolic process","type":"exact"},{"name":"up regulation of ATP catabolism","type":"exact"},{"name":"up regulation of ATP degradation","type":"exact"},{"name":"up regulation of ATP hydrolysis","type":"narrow"},{"name":"up-regulation of ATP breakdown","type":"exact"},{"name":"up-regulation of ATP catabolic process","type":"exact"},{"name":"up-regulation of ATP catabolism","type":"exact"},{"name":"up-regulation of ATP degradation","type":"exact"},{"name":"up-regulation of ATP hydrolysis","type":"narrow"},{"name":"upregulation of ATP breakdown","type":"exact"},{"name":"upregulation of ATP catabolic process","type":"exact"},{"name":"upregulation of ATP catabolism","type":"exact"},{"name":"upregulation of ATP degradation","type":"exact"},{"name":"upregulation of ATP hydrolysis","type":"narrow"}],"termid":"GO:1903291"}


id: MONDO:0009975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An antiquated term that refers to a non-Hodgkin lymphoma composed of diffuse infiltrates of large, often anaplastic lymphocytes.","definition_xrefs":["NCIT:C27824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system cancer","termid":"MONDO:0000612"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"dendritic cell tumor","termid":"MONDO:0020082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"reticulum cell sarcoma","secondary_identifiers":["GARD:16765","MESH:D054739","Orphanet:86900","ICD9:200.7","DOID:8538","EFO:0005287","ICD9:200.0","SCTID:373168002","MedDRA:10038804","MESH:D008228","ICD9:200.00","MEDGEN:44224","UMLS:C0024302","OMIM:267730"],"synonyms":[{"name":"Reticulum cell sarcoma","type":"exact"},{"name":"histiocytic lymphoma","type":"exact"},{"name":"interdigitating cell sarcoma","type":"exact"},{"name":"large-cell Lymphomas","type":"exact"},{"name":"reticular cell sarcoma","type":"exact"},{"name":"reticulosarcoma","type":"exact"},{"name":"reticulum cell sarcoma","type":"exact"},{"name":"sarcoma of reticular cell","type":"exact"}],"termid":"MONDO:0009975","xrefs":{"Monarch":{"xref_id":"0009975"}}}


id: SO:0001408
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The C-terminal residues of a polypeptide which are exchanged for a GPI-anchor.","definition_xrefs":["EBI:rh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"cleaved_for_gpi_anchor_region","synonyms":[{"name":"cleaved for gpi anchor region","type":"exact"}],"termid":"SO:0001408"}


id: SO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of exonic sequence of the 3' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3_prime_UTR_variant","termid":"SO:0001624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3_prime_UTR_exon_variant","synonyms":[{"name":"3 prime UTR exon variant","type":"exact"}],"termid":"SO:0002089"}


id: GO:0008399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of naphthalene to naphthalene 1,2-oxide.","definition_xrefs":["PMID:1742282","PMID:1981702"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene hydroxylase activity (obsolete GO:0008399)","synonyms":[{"name":"cytochrome P450 CYP2F2","type":"narrow"}],"termid":"GO:0008399"}


id: FYPO:0001544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfur measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular sulfur level","synonyms":[{"name":"normal cellular sulfur accumulation","type":"related"},{"name":"normal cellular sulfur level during mitotic cell cycle","type":"related"},{"name":"normal cellular sulfur level during vegetative growth","type":"exact"},{"name":"normal cellular sulphur level","type":"exact"}],"termid":"FYPO:0001544"}


id: GO:0019216
data:
  {"annotated_genes":["SJAG_02196","SJAG_03940","SJAG_02044","SJAG_02641","SJAG_03130","SJAG_02380","SJAG_02613","SJAG_01187","SJAG_02104","SJAG_01402","SJAG_01307","SJAG_01906","SJAG_00053","SJAG_04092","SJAG_04018","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78052,120087],"is_not":false,"summary":null,"term":"GO:0019216"},{"annotations":[92256,59709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[95746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[72608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[113354,117484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[114736,111702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[119543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"},{"annotations":[111823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[96961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045834"},{"annotations":[77278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[107781,90399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"},{"annotations":[76936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01187":null,"SJAG_01307":null,"SJAG_01402":null,"SJAG_01906":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02196":null,"SJAG_02380":null,"SJAG_02613":null,"SJAG_02641":null,"SJAG_03130":null,"SJAG_03170":null,"SJAG_03940":null,"SJAG_04018":null,"SJAG_04092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of lipid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-2426168","Reactome:R-HSA-400206"],"synonyms":[{"name":"regulation of lipid metabolism","type":"exact"}],"termid":"GO:0019216","terms_by_termid":{"GO:0010510":null,"GO:0010895":null,"GO:0019216":null,"GO:0032443":null,"GO:0045540":null,"GO:0045717":null,"GO:0045834":null,"GO:0070452":null,"GO:0071072":null,"GO:1902647":null,"GO:1902648":null,"GO:2001211":null}}


id: MONDO:0016665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unclassified vasculitis (obsolete MONDO:0016665)","secondary_identifiers":["Orphanet:251328"],"termid":"MONDO:0016665","xrefs":{"Monarch":{"xref_id":"0016665"}}}


id: PBO:0085591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in biosynthesis of the coenzyme lipoic acid; has similarity to E. coli lipoic acid synthase","termid":"PBO:0085591"}


id: GO:0018014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of the N-terminal methionine of proteins to form the derivative N-methyl-L-methionine.","definition_xrefs":["RESID:AA0064"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-methionine methylation (obsolete GO:0018014)","termid":"GO:0018014"}


id: RO:0002331
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c involved_in p if and only if c enables some process p', and p' is part of p","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_or_involved_in_regulation_of","termid":"RO:0002431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in","termid":"RO:0002331"}


id: GO:0043219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Non-compact myelin located adjacent to the nodes of Ranvier in a myelin segment. These non-compact regions include cytoplasm from the cell responsible for synthesizing the myelin. Lateral loops are found in the paranodal region adjacent to the nodes of Ranvier, while Schmidt-Lantermann clefts are analogous structures found within the compact myelin internode.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myelin sheath","termid":"GO:0043209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral loop","secondary_identifiers":["NIF_Subcellular:sao1067215520","NIF_Subcellular:sao1354781919"],"synonyms":[{"name":"Schwann cell paranodal termination","type":"related"},{"name":"oligodendrocyte paranodal termination","type":"related"},{"name":"paranodal loop","type":"related"}],"termid":"GO:0043219"}


id: GO:0015792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which arabitol is transported across a lipid bilayer, from one side of a membrane to the other. Arabitol is the pentitol derived from arabinose or lyxose by reduction of the aldehyde group. The D enantiomer is present in lichens and mushrooms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"arabinitol transmembrane transport","synonyms":[{"name":"arabinitol transport","type":"related"},{"name":"arabitol transport","type":"related"}],"termid":"GO:0015792"}


id: GO:0016556
data:
  {"annotated_genes":["SJAG_00319","SJAG_00088","SJAG_04754","SJAG_02978","SJAG_04065"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82107,74727,72436,77433,80290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990481"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_02978":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"mRNA modification","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0006381","Reactome:R-HSA-75072"],"synonyms":[{"name":"mRNA editing","type":"narrow"}],"termid":"GO:0016556","terms_by_termid":{"GO:1990481":null}}


id: PBO:0046886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 9 member B","termid":"PBO:0046886"}


id: PBO:0073282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 3","termid":"PBO:0073282"}


id: MOD:01813
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a morpholine-2-acetyl group for a hydrogen atom.","definition_xrefs":["PubMed:10446193","Unimod:29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morpholine-2-acetylated residue","synonyms":[{"name":"N-Succinimidyl-2-morpholine acetate","type":"related"},{"name":"N-succinimidylmorpholine-2-acetate derivative","type":"exact"},{"name":"SMA","type":"related"}],"termid":"MOD:01813"}


id: GO:1902369
data:
  {"annotated_genes":["SJAG_02573","SJAG_03696","SJAG_01331","SJAG_04946","SJAG_03883","SJAG_04825","SJAG_04586","SJAG_00797","SJAG_02370","SJAG_03283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74004],"is_not":false,"summary":null,"term":"GO:1902369"},{"annotations":[80524,80564,92035,102001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[91330,72388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[91630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[93529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"},{"annotations":[92483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA catabolic process.","definition_xrefs":["PMID:16640457","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"negatively_regulates","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01331":null,"SJAG_02370":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04586":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA breakdown","type":"exact"},{"name":"down regulation of RNA catabolic process","type":"exact"},{"name":"down regulation of RNA catabolism","type":"exact"},{"name":"down regulation of RNA degradation","type":"exact"},{"name":"down-regulation of RNA breakdown","type":"exact"},{"name":"down-regulation of RNA catabolic process","type":"exact"},{"name":"down-regulation of RNA catabolism","type":"exact"},{"name":"down-regulation of RNA degradation","type":"exact"},{"name":"downregulation of RNA breakdown","type":"exact"},{"name":"downregulation of RNA catabolic process","type":"exact"},{"name":"downregulation of RNA catabolism","type":"exact"},{"name":"downregulation of RNA degradation","type":"exact"},{"name":"inhibition of RNA breakdown","type":"narrow"},{"name":"inhibition of RNA catabolic process","type":"narrow"},{"name":"inhibition of RNA catabolism","type":"narrow"},{"name":"inhibition of RNA degradation","type":"narrow"},{"name":"negative regulation of RNA breakdown","type":"exact"},{"name":"negative regulation of RNA catabolism","type":"exact"},{"name":"negative regulation of RNA degradation","type":"exact"}],"termid":"GO:1902369","terms_by_termid":{"GO:0048255":null,"GO:0060212":null,"GO:0070935":null,"GO:0090669":null,"GO:0120271":null,"GO:1902369":null}}


id: MONDO:0005714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A life-threatening bacterial infection of the newborn caused by Treponema pallidum. It is transmitted to the infant from a mother with syphilis through the placenta during pregnancy. Signs and symptoms include irritability, fever, failure to thrive, saddle nose, cutaneous rash, and pneumonia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital syphilis","secondary_identifiers":["SCTID:35742006","MEDGEN:52622","ICD10CM:A50","GARD:22036","MESH:D013590","NORD:1753","DOID:9856","ICD9:090.9","Orphanet:499009","NCIT:C84649","icd11.foundation:587996426","UMLS:C0039131","EFO:0007219","ICD9:090"],"synonyms":[{"name":"MTCT of syphilis","type":"exact"},{"name":"congenital syphilis","type":"exact"},{"name":"mother-to-child transmission of syphilis","type":"exact"}],"termid":"MONDO:0005714","xrefs":{"Monarch":{"xref_id":"0005714"}}}


id: FYPO:0000460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between centromeres of sister chromatids is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic centromeric sister chromatid cohesion","termid":"FYPO:0000459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000337","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitotic centromeric sister chromatid cohesion","synonyms":[{"name":"decreased centromeric sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"decreased centromeric sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"decreased mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"decreased mitotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"decreased sister chromatid cohesion at centromere during mitosis","type":"exact"},{"name":"reduced mitotic centromeric sister chromatid cohesion","type":"exact"}],"termid":"FYPO:0000460"}


id: PBO:0084410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysyl-tRNA synthetase","termid":"PBO:0084410"}


id: PBO:0003788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain","termid":"PBO:0003788"}


id: PR:O94246
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate--cysteine ligase regulatory subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13295:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate--cysteine ligase regulatory subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.06c","secondary_identifiers":["UniProtKB:O94246"],"synonyms":[{"name":"GCS light chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GCLM","type":"exact"},{"name":"gamma-ECS regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-glutamylcysteine synthetase regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamate--cysteine ligase modifier subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94246"}


id: PBO:0070931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 39","termid":"PBO:0070931"}


id: GO:0098530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:dph","GOC:elh","GOC:tb","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of strand invasion","termid":"GO:0060542"},{"relation_name":"positively_regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of strand invasion","synonyms":[{"name":"positive regulation of D-loop biosynthesis","type":"related"},{"name":"positive regulation of D-loop formation","type":"related"},{"name":"positive regulation of Rad51-mediated strand invasion","type":"exact"}],"termid":"GO:0098530"}


id: MONDO:0010110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetraamelia - multiple malformations is an extremely rare mostly lethal congenital disorder characterized by absence of all four limbs and frequent associated major malformations involving the head, face, eyes, skeleton, heart, lungs, anus, urogenital, and central nervous systems. The syndrome has been described in fewer than 20 patients mainly of middle Eastern descent.","definition_xrefs":["Orphanet:3301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tetraamelia-multiple malformations syndrome","secondary_identifiers":["UMLS:C2931218","DOID:0112191","GARD:386","MEDGEN:419746","MESH:C536500","OMIMPS:273395","SCTID:716249009"],"synonyms":[{"name":"TETAMS","type":"related"},{"name":"TETRAAMELIA syndrome, autosomal recessive","type":"related"},{"name":"Tetraamelia multiple malformations X-linked","type":"related"},{"name":"Zimmer Taub Sova syndrome","type":"related"},{"name":"Zimmer phocomelia","type":"exact"}],"termid":"MONDO:0010110","xrefs":{"Monarch":{"xref_id":"0010110"}}}


id: GO:0102874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-16:0-2-18:2-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-16:0-2-18:3-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:17064923"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-16:0-2-18:2-digalactosyldiacylglycerol desaturase activity (obsolete GO:0102874)","termid":"GO:0102874"}


id: PR:Q9C0Y4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- agl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Y4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase Agl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.10c","synonyms":[{"name":"SPAPB24D3.10c","type":"related"},{"name":"Spom972h-agl1","type":"exact"},{"name":"agl","type":"related"},{"name":"maltase (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:Q9C0Y4"}


id: PBO:0017553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit Sno1 (predicted)","termid":"PBO:0017553"}


id: GO:0042069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving catecholamines.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of catecholamine metabolic process","synonyms":[{"name":"regulation of catecholamine metabolism","type":"exact"}],"termid":"GO:0042069"}


id: MONDO:0024621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant serous cystic neoplasm usually involving the ovary or the pancreas. It is characterized by the presence of invasive malignant glandular epithelial cells which often form papillary structures.","definition_xrefs":["NCIT:C3778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous adenocarcinoma","termid":"MONDO:0005278"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"serous cystadenocarcinoma","secondary_identifiers":["UMLS:C0206701","ICDO:8441/3","MEDGEN:60212"],"synonyms":[{"name":"serous adenocarcinoma","type":"broad"},{"name":"serous cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0024621","xrefs":{"Monarch":{"xref_id":"0024621"}}}


id: GO:0036399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a TCR signalosome.","definition_xrefs":["GOC:krc","PMID:22426112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"TCR signalosome assembly","synonyms":[{"name":"LAT signalosome assembly","type":"exact"},{"name":"linker for activation of T cells signalosome assembly","type":"exact"}],"termid":"GO:0036399"}


id: MONDO:0011130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sebaceous gland hyperplasia, familial presenile","secondary_identifiers":["OMIM:601700","MEDGEN:356529","UMLS:C1866428","MESH:C537530"],"synonyms":[{"name":"sebaceous gland hyperplasia, familial presenile","type":"exact"}],"termid":"MONDO:0011130","xrefs":{"Monarch":{"xref_id":"0011130"}}}


id: PBO:0051024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 4","termid":"PBO:0051024"}


id: MONDO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aspergillosis that is a serious fungal infection of the lung with pneumonia caused by Aspergillus, which spreads to other parts of the body through bloodstream in patients with acute leukemia and recipients of tissue transplants. Clinical symptoms include pulmonary nodules and hemorrhage.","definition_xrefs":["DOID:0050073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary aspergilloma","termid":"MONDO:0000266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invasive aspergillosis","secondary_identifiers":["UMLS:C0238013","SCTID:721798004","MEDGEN:922866","icd11.foundation:1314810340"],"termid":"MONDO:0000240","xrefs":{"Monarch":{"xref_id":"0000240"}}}


id: PBO:0089694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent chromatin remodeler/ ubiquitin-protein ligase E3","termid":"PBO:0089694"}


id: GO:0010228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in transforming a meristem that produces vegetative structures, such as leaves, into a meristem that produces reproductive structures, such as a flower or an inflorescence.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"part_of","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vegetative to reproductive phase transition of meristem","synonyms":[{"name":"floral evocation","type":"related"},{"name":"flowering","type":"related"},{"name":"transition from vegetative to reproductive phase","type":"exact"}],"termid":"GO:0010228"}


id: GO:0048582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of post-embryonic development","synonyms":[{"name":"activation of post-embryonic development","type":"narrow"},{"name":"stimulation of post-embryonic development","type":"narrow"},{"name":"up regulation of post-embryonic development","type":"exact"},{"name":"up-regulation of post-embryonic development","type":"exact"},{"name":"upregulation of post-embryonic development","type":"exact"}],"termid":"GO:0048582"}


id: PATO:0000642
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being merged with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fused with","synonyms":[{"name":"coalesced","type":"related"},{"name":"fused","type":"exact"},{"name":"fused to","type":"exact"},{"name":"joined with","type":"related"},{"name":"merged with","type":"related"}],"termid":"PATO:0000642"}


id: PBO:0051912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 1","termid":"PBO:0051912"}


id: SO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variably distant linear promoter region recognized by TFIIIC, with consensus sequence TGGCnnAGTGG.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_box","secondary_identifiers":["http://en.wikipedia.org/wiki/A-box"],"synonyms":[{"name":"A-box","type":"exact"}],"termid":"SO:0000619"}


id: GO:0102169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyl-phenazine-1-carboxylate + 2 H+ + NADH + O2 = CO2 + H2O + NAD+ + pyocyanin. Also converts phenazine-1-carboxylate into 1-hydroxyphenazine.","definition_xrefs":["PMID:11591691","EC:1.14.13.218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"5-methylphenazine-1-carboxylate 1-monooxygenase (NADH) activity","synonyms":[{"name":"pyocyanin hydroxylase activity","type":"related"}],"termid":"GO:0102169"}


id: PBO:0072196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 13","termid":"PBO:0072196"}


id: PBO:0052456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 7","termid":"PBO:0052456"}


id: PBO:0059843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1","termid":"PBO:0059843"}


id: PBO:0062474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily G member 2","termid":"PBO:0062474"}


id: GO:0021761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the limbic system over time from its initial formation until its mature state. The limbic system is a collection of structures in the brain involved in emotion, motivation and emotional aspects of memory.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","ISBN:0878937420","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limbic system development","termid":"GO:0021761"}


id: PBO:0067323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 414, pseudogene","termid":"PBO:0067323"}


id: GO:0042629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Coarse, bluish-black staining cytoplasmic granules, bounded by a plasma membrane and found in mast cells and basophils. Contents include histamine, heparin, chondroitin sulfates, chymase and tryptase.","definition_xrefs":["GOC:jl","PMID:12360215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"mast cell granule","termid":"GO:0042629"}


id: PBO:0080976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 11","termid":"PBO:0080976"}


id: GO:1905714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mitochondrial calcium release that is involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:26644474"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial calcium release involved in regulation of presynaptic cytosolic calcium ion concentration (obsolete GO:1905714)","synonyms":[{"name":"calcium ion transmembrane export from mitochondrion involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium ion transmembrane export from mitochondrion involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"mitochondrial calcium release involved in regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:1905714"}


id: PBO:0085326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol phosphate phosphatase; role in early and medial Golgi PtdIns4P hydrolysis; regulated by Vps74p interaction; ER localized transmembrane protein which cycles through the Golgi; role in protein trafficking, processing, secretion, and cell wall maintenance; regulates sphingolipid biosynthesis by modulating PtdIns(4)P metabolism; PtdIns4P PPase activity is crucial for autophagosome-vacuole fusion during autophagy; human homolog SACM1L complements autophagy defects of the null","termid":"PBO:0085326"}


id: MONDO:0022414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete allain-babin-demarquez syndrome (obsolete MONDO:0022414)","secondary_identifiers":["Orphanet:1526"],"synonyms":[{"name":"acro cephalo synostosis","type":"related"},{"name":"craniosynostosis synostoses hypertensive nephropathy","type":"related"}],"termid":"MONDO:0022414","xrefs":{"Monarch":{"xref_id":"0022414"}}}


id: PBO:0046604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 6","termid":"PBO:0046604"}


id: MONDO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tympanic membrane disease that is characterized by blisters on the eardrum resulting from infection.","definition_xrefs":["DOID:13791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tympanic membrane disorder","termid":"MONDO:0003648"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myringitis bullosa hemorrhagica","secondary_identifiers":["SCTID:33528003","MEDGEN:509977","ICD9:384.01","UMLS:C0155461"],"synonyms":[{"name":"bullous myringitis","type":"exact"}],"termid":"MONDO:0001803","xrefs":{"Monarch":{"xref_id":"0001803"}}}


id: MONDO:0012347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hamartoma, Precalcaneal congenital fibrolipomatous","secondary_identifiers":["OMIM:609808","MEDGEN:342846","UMLS:C1853298","MESH:C565226"],"synonyms":[{"name":"Pcfh","type":"related"},{"name":"hamartoma, Precalcaneal congenital fibrolipomatous","type":"exact"}],"termid":"MONDO:0012347","xrefs":{"Monarch":{"xref_id":"0012347"}}}


id: PBO:0091371
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin Fusion Degradation protein","termid":"PBO:0091371"}


id: PBO:0055742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMX1A antisense RNA 2","termid":"PBO:0055742"}


id: PBO:0061492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of interferon response","termid":"PBO:0061492"}


id: PBO:0054384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1780","termid":"PBO:0054384"}


id: PBO:0027100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rDNA_antisense_small_RNA_level","termid":"PBO:0027100"}


id: PBO:0059939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 25","termid":"PBO:0059939"}


id: GO:1900717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of violaceol II biosynthetic process","termid":"GO:1900716"},{"relation_name":"negatively_regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of violaceol II biosynthetic process","synonyms":[{"name":"down regulation of violaceol II anabolism","type":"exact"},{"name":"down regulation of violaceol II biosynthesis","type":"exact"},{"name":"down regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down regulation of violaceol II formation","type":"exact"},{"name":"down regulation of violaceol II synthesis","type":"exact"},{"name":"down-regulation of violaceol II anabolism","type":"exact"},{"name":"down-regulation of violaceol II biosynthesis","type":"exact"},{"name":"down-regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down-regulation of violaceol II formation","type":"exact"},{"name":"down-regulation of violaceol II synthesis","type":"exact"},{"name":"downregulation of violaceol II anabolism","type":"exact"},{"name":"downregulation of violaceol II biosynthesis","type":"exact"},{"name":"downregulation of violaceol II biosynthetic process","type":"exact"},{"name":"downregulation of violaceol II formation","type":"exact"},{"name":"downregulation of violaceol II synthesis","type":"exact"},{"name":"inhibition of violaceol II anabolism","type":"exact"},{"name":"inhibition of violaceol II biosynthesis","type":"exact"},{"name":"inhibition of violaceol II biosynthetic process","type":"narrow"},{"name":"inhibition of violaceol II formation","type":"exact"},{"name":"inhibition of violaceol II synthesis","type":"exact"},{"name":"negative regulation of violaceol II anabolism","type":"exact"},{"name":"negative regulation of violaceol II biosynthesis","type":"exact"},{"name":"negative regulation of violaceol II formation","type":"exact"},{"name":"negative regulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900717"}


id: PATO:0001588
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of rate which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of rate","termid":"PATO:0001586"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of rate","synonyms":[{"name":"low variability of rate","type":"exact"}],"termid":"PATO:0001588"}


id: MONDO:0020535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"House allergic alveolitis is a hypersensitivity pneumonitis resulting from the inhalation of an antigen to which an individual has been previously sensitized in his/her domestic environment. House allergic alveolitis encompasses summer hypersensitivity pneumonitis, humidifier-induced lung diseases, hot tub lung and legionellosis.","definition_xrefs":["Orphanet:99907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"house allergic alveolitis","secondary_identifiers":["MEDGEN:1387737","GARD:19703","icd11.foundation:1985023223","SCTID:725415009","UMLS:C4511048"],"termid":"MONDO:0020535","xrefs":{"Monarch":{"xref_id":"0020535"}}}


id: PBO:0034381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_synthesis_of","termid":"PBO:0034381"}


id: PBO:0048468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial cells missing transcription factor 1","termid":"PBO:0048468"}


id: MONDO:0020036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare nervous system cancer.","gene_count":0,"genotype_count":0,"name":"obsolete rare nervous system tumor (obsolete MONDO:0020036)","secondary_identifiers":["Orphanet:98062"],"synonyms":[{"name":"nervous system rare tumor","type":"exact"},{"name":"rare nervous system cancer","type":"exact"},{"name":"rare nervous system neoplasm","type":"exact"}],"termid":"MONDO:0020036","xrefs":{"Monarch":{"xref_id":"0020036"}}}


id: GO:1902997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neurofibrillary tangle assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:sjp","PMID:15897157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inclusion body assembly","termid":"GO:0090084"},{"relation_name":"is_a","term_name":"regulation of neurofibrillary tangle assembly","termid":"GO:1902996"},{"relation_name":"negatively_regulates","term_name":"neurofibrillary tangle assembly","termid":"GO:1902988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of neurofibrillary tangle assembly","synonyms":[{"name":"down regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"down regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"down regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"down regulation of neurofibrillary tangle formation","type":"exact"},{"name":"down regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"down regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"down-regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"down-regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"down-regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"down-regulation of neurofibrillary tangle formation","type":"exact"},{"name":"down-regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"down-regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"downregulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"downregulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"downregulation of neurofibrillary tangle assembly","type":"exact"},{"name":"downregulation of neurofibrillary tangle formation","type":"exact"},{"name":"downregulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"downregulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"inhibition of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"inhibition of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"inhibition of neurofibrillary tangle assembly","type":"narrow"},{"name":"inhibition of neurofibrillary tangle formation","type":"narrow"},{"name":"inhibition of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"inhibition of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"negative regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"negative regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"negative regulation of neurofibrillary tangle formation","type":"exact"},{"name":"negative regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"negative regulation of star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902997"}


id: GO:0061520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a Langerhans cell.","definition_xrefs":["GOC:dph","PMID:22729249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell differentiation","termid":"GO:0043011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Langerhans cell differentiation","termid":"GO:0061520"}


id: PR:Q10330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2501 gene.","definition_xrefs":["UniProtKB:Q10330","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L25-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.18","synonyms":[{"name":"Spom972h-rpl2501","type":"exact"}],"termid":"PR:Q10330"}


id: PBO:0075776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 5","termid":"PBO:0075776"}


id: PBO:0088802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup146","termid":"PBO:0088802"}


id: FYPO:0002051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, elongated, has no septum, and contains more than one nucleus. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002049"},{"relation_name":"is_a","term_name":"swollen multinucleate vegetative cell","termid":"FYPO:0004257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000032","FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"swollen elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate vegetative cell with increased cell volume","type":"exact"},{"name":"enlarged elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"large elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"swollen elongated multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"swollen elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002051"}


id: PBO:0040509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin induced 1","termid":"PBO:0040509"}


id: MONDO:0017796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ameloblastic carcinoma (obsolete MONDO:0017796)","termid":"MONDO:0017796","xrefs":{"Monarch":{"xref_id":"0017796"}}}


id: GO:0036248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phytochelatin 4 (PC4) into the vacuole. Phytochelatin 4 is a glutathione-related peptide composed of (gamma-Glu-Cys)n-Gly where n=4, and where the Glu and Cys residues are linked through a gamma-carboxylamide bond.","definition_xrefs":["PMID:19001374","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"phytochelatin import into vacuole","termid":"GO:0071995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"phytochelatin 4 import into vacuole","synonyms":[{"name":"PC4 import into vacuole","type":"exact"}],"termid":"GO:0036248"}


id: GO:0050804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trans-synaptic signaling","termid":"GO:0099177"},{"relation_name":"regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"modulation of chemical synaptic transmission","synonyms":[{"name":"modulation of synaptic transmission","type":"broad"},{"name":"regulation of chemical synaptic transmission","type":"exact"},{"name":"regulation of synaptic transmission","type":"exact"}],"termid":"GO:0050804"}


id: MONDO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete split-hand/foot malformation (obsolete MONDO:0000095)","termid":"MONDO:0000095","xrefs":{"Monarch":{"xref_id":"0000095"}}}


id: PBO:0059064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 3C","termid":"PBO:0059064"}


id: MONDO:0015275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Partial atrioventricular canal (PAVC) is a congenital heart malformation characterized by an atrial septal defect (ASD; ostium primum), clefts of mitral and occasionally tricuspid valves, two separate atrioventricular (AV) valve annuli and an intact ventricular septum. The typical symptoms of PAVC are impaired exercise capacity and exertional dyspnea.","definition_xrefs":["Orphanet:1330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrioventricular septal defect","termid":"MONDO:0020290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"partial atrioventricular canal","secondary_identifiers":["UMLS:C4023290","MEDGEN:868879","MESH:C536112","GARD:4229","SCTID:718216009","NANDO:2200268"],"synonyms":[{"name":"PAVC","type":"exact"},{"name":"partial AVSD","type":"related"},{"name":"partial atrioventricular canal defect","type":"exact"},{"name":"partial atrioventricular septal defects","type":"related"},{"name":"partial common atrioventricular canal","type":"related"}],"termid":"MONDO:0015275","xrefs":{"Monarch":{"xref_id":"0015275"}}}


id: PBO:0045926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF containing fibulin extracellular matrix protein 2","termid":"PBO:0045926"}


id: MONDO:1010415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, rabbit","secondary_identifiers":["OMIA:000344-9986"],"termid":"MONDO:1010415","xrefs":{"Monarch":{"xref_id":"1010415"}}}


id: MONDO:0100383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(11;19)(q23;p13). (A cytogenetic abnormality that refers to the translocation of the long arm (q23) of chromosome 11 and the short arm (p13) of chromosome 19. It is associated with KMT2A (MLL) fusions, including those with MLLT1 (ENL) and ELL, and acute myeloid leukemia.)","definition_xrefs":["NCIT:C168764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, t(11;19)(q23;p13)","synonyms":[{"name":"AML, t(11;19)(q23;p13)","type":"exact"}],"termid":"MONDO:0100383","xrefs":{"Monarch":{"xref_id":"0100383"}}}


id: PBO:0073618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 1","termid":"PBO:0073618"}


id: MONDO:0005301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive autoimmune disorder affecting the central nervous system resulting in demyelination. Patients develop physical and cognitive impairments that correspond with the affected nerve fibers.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"CNS demyelinating autoimmune disease","termid":"MONDO:0006704"},{"relation_name":"is_a","term_name":"demyelinating disease of central nervous system","termid":"MONDO:0020800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559"],"is_obsolete":false,"name":"multiple sclerosis","secondary_identifiers":["NCIT:C3243","UMLS:C0026769","MESH:D009103","DOID:2377","MEDGEN:10123","NANDO:1200023","NANDO:2100250","NANDO:2200904","Orphanet:802","SCTID:24700007","icd11.foundation:1298865187","ICD10CM:G35","ICD9:340"],"synonyms":[{"name":"generalised multiple sclerosis","type":"narrow"},{"name":"generalized multiple sclerosis","type":"narrow"},{"name":"insular sclerosis","type":"related"}],"termid":"MONDO:0005301","xrefs":{"Monarch":{"xref_id":"0005301"}}}


id: PBO:0052694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 2","termid":"PBO:0052694"}


id: PR:O60137
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component swd2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.06c","synonyms":[{"name":"COMPASS component swd2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component swd2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-swd2","type":"exact"},{"name":"complex proteins associated with set1 protein swd2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60137"}


id: PBO:0001283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ranBP","termid":"PBO:0001283"}


id: PBO:0030003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-P-bodies_present_in_increased_numbers","termid":"PBO:0030003"}


id: GO:0160214
data:
  {"annotated_genes":["SJAG_03170","SJAG_00053"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59707,92260],"is_not":false,"summary":null,"term":"GO:0160214"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a plasma membrane with an endoplasmic reticulum membrane, via membrane lipid binding, to establish membrane contact sites and mediate exchange and communication.","definition_xrefs":["PMID:39239853","PMID:23041194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"endoplasmic reticulum-plasma membrane adaptor activity","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0160214","terms_by_termid":{"GO:0160214":null}}


id: MOD:01025
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-bromo-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated tyrosine","termid":"MOD:01000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-bromo-L-tyrosine","synonyms":[{"name":"3'-BrTyr","type":"exact"}],"termid":"MOD:01025"}


id: MONDO:0005533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Particular variety of ulcerative colitis where only the left half of the colon is inflamed.","definition_xrefs":["EFO:0005623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ulcerative colitis","termid":"MONDO:0005101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"distal colitis","secondary_identifiers":["UMLS:C0860168","MEDGEN:678582","NANDO:1200451","ICD9:558.9","SCTID:373639002"],"synonyms":[{"name":"inflammation of left colon","type":"exact"},{"name":"left colon inflammation","type":"exact"}],"termid":"MONDO:0005533","xrefs":{"Monarch":{"xref_id":"0005533"}}}


id: GO:1990671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi medial cisterna. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["PMID:24119662","PMID:16038056","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"vesicle fusion with Golgi medial cisterna membrane","termid":"GO:1990671"}


id: FYPO:0009087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of magnesium chloride and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to magnesium chloride and sodium dodecyl sulfate","synonyms":[{"name":"resistance to magnesium chloride and SDS","type":"exact"},{"name":"resistance to magnesium chloride and SDS during vegetative growth","type":"exact"},{"name":"resistance to magnesium chloride and SDS in combination","type":"exact"},{"name":"resistance to magnesium chloride and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to magnesium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to magnesium chloride and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to magnesium chloride and SDS","type":"exact"},{"name":"resistant to magnesium chloride and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009087"}


id: MONDO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the stomach resulting from viral infection.","definition_xrefs":["NCIT:C27184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"},{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"viral gastritis","secondary_identifiers":["MEDGEN:107873","ICD9:008.8","DOID:2327","SCTID:285344007","UMLS:C0563238"],"synonyms":[{"name":"Viruses caused gastritis (disease)","type":"exact"},{"name":"Viruses gastritis (disease)","type":"exact"},{"name":"viral gastritis","type":"exact"}],"termid":"MONDO:0002270","xrefs":{"Monarch":{"xref_id":"0002270"}}}


id: PBO:0026920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K8_acetylation","termid":"PBO:0026920"}


id: MONDO:0013633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any encephalopathy, acute, infection-induced in which the cause of the disease is a mutation in the CPT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute necrotizing encephalopathy of childhood","termid":"MONDO:0016991"},{"relation_name":"is_a","term_name":"encephalitis, acute, infection-induced, susceptibility to","termid":"MONDO:0800174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, acute, infection-induced, susceptibility to, 4","secondary_identifiers":["OMIM:614212","MEDGEN:481790","UMLS:C3280160"],"synonyms":[{"name":"CPT2 encephalopathy, acute, infection-induced","type":"exact"},{"name":"IIAE4","type":"related"},{"name":"encephalopathy, acute, infection-induced caused by mutation in CPT2","type":"exact"},{"name":"encephalopathy, acute, infection-induced, 4, susceptibility to","type":"exact"},{"name":"encephalopathy, acute, infection-induced, susceptibility to, 4","type":"exact"},{"name":"encephalopathy, acute, infection-induced, susceptibility to, type 4","type":"exact"}],"termid":"MONDO:0013633","xrefs":{"Monarch":{"xref_id":"0013633"}}}


id: MONDO:0004723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the liver. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C5753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"},{"relation_name":"is_a","term_name":"hepatobiliary benign neoplasm","termid":"MONDO:0859689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"liver leiomyoma","secondary_identifiers":["DOID:917","MEDGEN:232276","UMLS:C1333968"],"synonyms":[{"name":"hepatic leiomyoma","type":"exact"},{"name":"leiomyoma of liver","type":"exact"},{"name":"leiomyoma of the liver","type":"exact"},{"name":"liver leiomyoma","type":"exact"}],"termid":"MONDO:0004723","xrefs":{"Monarch":{"xref_id":"0004723"}}}


id: GO:0006256
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78242],"is_not":false,"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP, uridine (5'-)diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"UDP metabolic process","termid":"GO:0046048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"UDP catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"UDP breakdown","type":"exact"},{"name":"UDP catabolism","type":"exact"},{"name":"UDP degradation","type":"exact"}],"termid":"GO:0006256","terms_by_termid":{"GO:0006256":null}}


id: PR:O14226
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- exo84 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo84 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.08c","synonyms":[{"name":"Spom972h-exo84","type":"exact"}],"termid":"PR:O14226"}


id: PBO:0065172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin 2","termid":"PBO:0065172"}


id: GO:1990593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nascent polypeptide-associated complex, a heterodimeric protein complex that can reversibly bind to ribosomes and is located in direct proximity to newly synthesized polypeptide chains as they emerge from the ribosome.","definition_xrefs":["PMID:25487825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nascent polypeptide-associated complex binding","synonyms":[{"name":"NAC binding","type":"exact"},{"name":"NACA binding","type":"exact"}],"termid":"GO:1990593"}


id: GO:1904324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["PMID:15937517","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of inhibitory G protein-coupled receptor phosphorylation","termid":"GO:1904323"},{"relation_name":"negatively_regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"down regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"down-regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"downregulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"inhibition of inhibitory G-protein coupled receptor phosphorylation","type":"narrow"},{"name":"negative regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904324"}


id: PBO:0059895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 18","termid":"PBO:0059895"}


id: GO:0016409
data:
  {"annotated_genes":["SJAG_00895","SJAG_04451","SJAG_01112","SJAG_01299","SJAG_02305","SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76814,69532,72810,74710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019706"},{"annotations":[80723,78643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_02305":null,"SJAG_04178":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5686304"],"termid":"GO:0016409","terms_by_termid":{"GO:0004758":null,"GO:0019706":null}}


id: PATO:0000043
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical entity inhering in a bearer by virtue of whether the bearer's molecules are being perceived by a taste and odorant receptors.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavor","termid":"PATO:0000043"}


id: MONDO:0013784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic neurological disorder characterized by neonatal onset of rigidity and intractable seizures, with episodic jerking already beginning in utero. Affected infants have small heads, remain visually inattentive, do not feed independently, and make no developmental progress. Frequent spontaneous apnea and bradycardia usually culminate in cardiopulmonary arrest and death in infancy, although some cases were described with a milder clinical course and survival into childhood. The cause of the disease is a variation in the BRAT1 gene.","definition_xrefs":["Orphanet:435845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"neonatal-onset encephalopathy with rigidity and seizures","secondary_identifiers":["UMLS:C3281029","GARD:17718","MEDGEN:482659","OMIM:614498"],"synonyms":[{"name":"RMFSL","type":"related"},{"name":"lethal neonatal rigidity-multifocal seizure syndrome","type":"exact"},{"name":"lethal neonatal spasticity-epileptic encephalopathy syndrome","type":"exact"},{"name":"neonatal-onset encephalopathy with rigidity and seizures","type":"exact"},{"name":"rigidity and multifocal seizure syndrome, lethal neonatal","type":"related"}],"termid":"MONDO:0013784","xrefs":{"Monarch":{"xref_id":"0013784"}}}


id: FYPO:0000487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"increased meiotic recombination","synonyms":[{"name":"meiotic recombination: increased","type":"related"}],"termid":"FYPO:0000487"}


id: PBO:0071930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 7","termid":"PBO:0071930"}


id: FYPO:0004620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which spindle disassembly is abnormal. Spindle disassembly is the controlled breakdown of the spindle.","definition_xrefs":["GO:0051230","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"abnormal spindle disassembly","termid":"FYPO:0004620"}


id: GO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of platelet activating factor following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet activating factor production involved in inflammatory response","secondary_identifiers":["GO:0002392","GO:0002535","GO:0002390"],"synonyms":[{"name":"platelet activating factor production","type":"related"},{"name":"platelet activating factor production involved in acute inflammatory response","type":"narrow"},{"name":"platelet activating factor secretion","type":"narrow"},{"name":"platelet activating factor secretion involved in acute inflammatory response","type":"narrow"},{"name":"platelet activating factor secretion involved in inflammatory response","type":"narrow"}],"termid":"GO:0002391"}


id: PBO:0044107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 55","termid":"PBO:0044107"}


id: PBO:0116672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 6 interacting protein 1 pseudogene 3","termid":"PBO:0116672"}


id: GO:0097041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenolic phthiocerol, a phthiocerol derivative having a 4-hydroxyphenyl substituent at the 29-position.","definition_xrefs":["GOC:dph","GOC:ecd","PMID:9201977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phenolic phthiocerol biosynthetic process","synonyms":[{"name":"phenolic phthiocerol anabolism","type":"exact"},{"name":"phenolic phthiocerol biosynthesis","type":"exact"},{"name":"phenolic phthiocerol formation","type":"exact"},{"name":"phenolic phthiocerol synthesis","type":"exact"},{"name":"phenolphthiocerol biosynthesis","type":"exact"}],"termid":"GO:0097041"}


id: PBO:0090676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex SANT/Myb domain subunit Snt1","termid":"PBO:0090676"}


id: GO:0046566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the 4,5-ring opening reaction: 3,4-dihydroxyphenylalanine + O2 = 4,5-seco-DOPA. 4,5-seco-DOPA spontaneously recyclizes to form betalamic acid.","definition_xrefs":["PMID:11711071"],"gene_count":0,"genotype_count":0,"name":"obsolete DOPA dioxygenase activity (obsolete GO:0046566)","synonyms":[{"name":"dihydroxyphenylalanine dioxygenase activity","type":"exact"}],"termid":"GO:0046566"}


id: PATO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being gathered or tending to gather into a mass or whole.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aggregated","synonyms":[{"name":"clumped","type":"exact"},{"name":"clustered","type":"exact"}],"termid":"PATO:0001629"}


id: PBO:0050492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B2","termid":"PBO:0050492"}


id: PBO:0042222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNQ pseudogene 3","termid":"PBO:0042222"}


id: PBO:0074973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-15","termid":"PBO:0074973"}


id: PBO:0071752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0","termid":"PBO:0071752"}


id: MONDO:0012726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association of hematuria (without proteinuria) with extrarenal manifestations: retinal arterial tortuosities responsible for retinal hemorrhages, cardiac arrhythmia, Raynaud phenomena and congenital muscular contractures.","definition_xrefs":["Orphanet:73229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"COL4A1-related disorder","termid":"MONDO:0800461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant familial hematuria-retinal arteriolar tortuosity-contractures syndrome","secondary_identifiers":["ICD9:758.89","OMIM:611773","SCTID:702428000","GARD:10889","MESH:C567088","UMLS:C2673195","MEDGEN:382033"],"synonyms":[{"name":"HANAC","type":"exact"},{"name":"HANAC syndrome","type":"exact"},{"name":"angiopathy, hereditary, with nephropathy, aneurysms, and muscle cramps","type":"exact"},{"name":"hereditary angiopathy with nephropathy, aneurysms, and muscle cramps syndrome","type":"related"},{"name":"hereditary angiopathy-nephropathy-aneurysms-muscle cramps syndrome","type":"exact"}],"termid":"MONDO:0012726","xrefs":{"Monarch":{"xref_id":"0012726"}}}


id: GO:1903126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of centriole-centriole cohesion.","definition_xrefs":["GO_REF:0000058","PMID:24554434","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"},{"relation_name":"negatively_regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"negative regulation of centriole-centriole cohesion","synonyms":[{"name":"down regulation of centriole-centriole cohesion","type":"exact"},{"name":"down-regulation of centriole-centriole cohesion","type":"exact"},{"name":"downregulation of centriole-centriole cohesion","type":"exact"},{"name":"inhibition of centriole-centriole cohesion","type":"narrow"}],"termid":"GO:1903126"}


id: PBO:0075678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squalene epoxidase","termid":"PBO:0075678"}


id: SO:0000916
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000916 edit_operation (obsolete SO:0000916)","synonyms":[{"name":"edit operation","type":"exact"}],"termid":"SO:0000916"}


id: PBO:0070292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 33","termid":"PBO:0070292"}


id: GO:0044250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The slowing of metabolic processes to very low levels in order to conserve energy as a part of hibernation.","definition_xrefs":["Wikipedia:Hibernation","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"part_of","term_name":"hibernation","termid":"GO:0042750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metabolic activity involved in hibernation","synonyms":[{"name":"down regulation of metabolic activity during hibernation","type":"related"},{"name":"down-regulation of metabolic activity during hibernation","type":"related"},{"name":"downregulation of metabolic activity during hibernation","type":"related"},{"name":"inhibition of metabolic activity during hibernation","type":"narrow"},{"name":"negative regulation of metabolic activity during hibernation","type":"related"}],"termid":"GO:0044250"}


id: PBO:0091773
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae CDC6","termid":"PBO:0091773"}


id: GO:0002527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure contributing to an acute inflammatory response.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"},{"relation_name":"part_of","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasodilation involved in acute inflammatory response","synonyms":[{"name":"vasodilation during acute inflammatory response","type":"related"}],"termid":"GO:0002527"}


id: PBO:0084740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; required for normal oxygen consumption; contains twin cysteine-x9-cysteine motifs; protein abundance increases in response to DNA replication stress","termid":"PBO:0084740"}


id: PBO:0074669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 55","termid":"PBO:0074669"}


id: PBO:0083700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsin-like protein required for endocytosis and actin patch assembly; functionally redundant with Ent1p; contains clathrin-binding motif at C-terminus; ENT2 has a paralog, ENT1, that arose from the whole genome duplication","termid":"PBO:0083700"}


id: PBO:0083851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp46p (EXOSC5)","termid":"PBO:0083851"}


id: MONDO:0002531
data:
  {"annotated_genes":["SJAG_01111","SJAG_02855","SJAG_04213","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[88626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[87718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[87300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[86877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"},{"annotations":[89144,89143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign or malignant tumor involving the skin. Representative examples of benign skin neoplasms include the benign melanocytic skin nevus, acanthoma, sebaceous adenoma, sweat gland adenoma, lipoma, hemangioma, fibroma, and benign fibrous histiocytoma. Representative examples of malignant skin neoplasms include basal cell carcinoma, squamous cell carcinoma, melanoma, and Kaposi sarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_02855":null,"SJAG_03453":null,"SJAG_04213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3372","SCTID:126488004","ICD9:239.2","DOID:3165","MEDGEN:19993","MESH:D012878","ONCOTREE:SKIN","UMLS:C0037286","EFO:0004198"],"synonyms":[{"name":"neoplasm of skin","type":"exact"},{"name":"neoplasm of skin by site","type":"exact"},{"name":"neoplasm of the skin","type":"exact"},{"name":"neoplasm of zone of skin","type":"exact"},{"name":"skin","type":"related"},{"name":"skin benign neoplasm","type":"related"},{"name":"skin neoplasm","type":"exact"},{"name":"skin neoplasms","type":"exact"},{"name":"skin tumor","type":"exact"},{"name":"skin tumour","type":"exact"},{"name":"tumor of skin","type":"exact"},{"name":"tumor of the skin","type":"exact"},{"name":"tumor of zone of skin","type":"exact"},{"name":"tumour of skin","type":"exact"},{"name":"tumour of the skin","type":"exact"},{"name":"tumour of zone of skin","type":"exact"},{"name":"zone of skin neoplasm","type":"exact"},{"name":"zone of skin neoplasm (disease)","type":"exact"},{"name":"zone of skin tumor","type":"exact"},{"name":"zone of skin tumour","type":"exact"}],"termid":"MONDO:0002531","terms_by_termid":{"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0009578":null,"MONDO:0010621":null,"MONDO:0024517":null,"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0002531"}}}


id: MOD:00655
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with an myristoylsulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoylated residue","termid":"MOD:00438"},{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"S-myristoylated residue","synonyms":[{"name":"SMyrRes","type":"exact"}],"termid":"MOD:00655"}


id: MONDO:0012560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete invasive pneumococcal disease, recurrent isolated, 1 (obsolete MONDO:0012560)","secondary_identifiers":["OMIM:610799"],"termid":"MONDO:0012560","xrefs":{"Monarch":{"xref_id":"0012560"}}}


id: PBO:0078390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-5","termid":"PBO:0078390"}


id: PBO:0080397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26C pseudogene 1","termid":"PBO:0080397"}


id: GO:0061216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the mesonephros progressing from its initial formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in mesonephros development (obsolete GO:0061216)","termid":"GO:0061216"}


id: MONDO:0010364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-retinitis pigmentosa syndrome is characterized by moderate intellectual deficit and severe, early-onset retinitis pigmentosa. It has been described in five males spanning three generations of one family. Some patients also had microcephaly. It is transmitted as an X-linked recessive trait.","definition_xrefs":["Orphanet:85332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the short arm of chromosome X","termid":"MONDO:0017004"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-retinitis pigmentosa syndrome","secondary_identifiers":["UMLS:C1845136","GARD:8360","ICD10CM:H35.5","OMIM:300578","MEDGEN:336862","SCTID:719808002"],"synonyms":[{"name":"Aldred syndrome","type":"exact"},{"name":"X-linked mental handicap-retinitis pigmentosa syndrome","type":"related"},{"name":"chromosome Xp11.3 deletion syndrome","type":"related"},{"name":"chromosome xp11.3 deletion syndrome, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, with retinitis pigmentosa","type":"related"},{"name":"mental retardation, X-linked, with retinitis pigmentosa","type":"related"},{"name":"nonspecific intellectual disability associated with retinitis pigmentosa","type":"related"},{"name":"nonspecific mental retardation associated with retinitis pigmentosa","type":"related"},{"name":"retinitis pigmentosa and intellectual disability due to Xp11.3 microdeletion","type":"exact"},{"name":"retinitis pigmentosa and intellectual disability due to del(X)(p11.3)","type":"exact"},{"name":"retinitis pigmentosa and intellectual disability due to monosomy Xp11.3","type":"exact"}],"termid":"MONDO:0010364","xrefs":{"Monarch":{"xref_id":"0010364"}}}


id: MONDO:0030263
data:
  {"annotated_genes":["SJAG_03761"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88348],"is_not":false,"summary":null,"term":"MONDO:0030263"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"POLR3-related leukodystrophy","termid":"MONDO:0700282"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 21","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070407","MEDGEN:1778269","OMIM:619310","UMLS:C5543334"],"synonyms":[{"name":"HLD21","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 21","type":"exact"}],"termid":"MONDO:0030263","terms_by_termid":{"MONDO:0030263":null},"xrefs":{"Monarch":{"xref_id":"0030263"}}}


id: FYECO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing galactose and glucose as the carbon sources, yeast extract and other components. The concentration of galactose is typically around 2%, whereas the concentration of glucose is very low - around 0.1%.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose rich medium with trace glucose","synonyms":[{"name":"YpGalA","type":"narrow"},{"name":"non-fermentable galactose and very low glucose rich medium","type":"exact"},{"name":"nonfermentable galactose and very low glucose rich medium","type":"exact"}],"termid":"FYECO:0000148"}


id: MONDO:0007806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotrichosis 4 (obsolete MONDO:0007806)","termid":"MONDO:0007806","xrefs":{"Monarch":{"xref_id":"0007806"}}}


id: PR:G2TRL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holo-[acyl-carrier-protein] synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.17","synonyms":[{"name":"4'-phosphopantetheinyl transferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Holo-ACP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-new8","type":"exact"}],"termid":"PR:G2TRL9"}


id: PBO:0059721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 29","termid":"PBO:0059721"}


id: PBO:0087155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase in the DEAD-box family; necessary for prespliceosome formation, bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA","termid":"PBO:0087155"}


id: GO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protease or a peptidase.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protease binding","secondary_identifiers":["Reactome:R-HSA-1297354"],"termid":"GO:0002020"}


id: PBO:0089548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-8 family plus-end directed microtubule motor Klp6","termid":"PBO:0089548"}


id: MONDO:0004951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The type species of lentivirus and the etiologic agent of acquired immunodeficiency syndrome (AIDS). It is characterized by its cytopathic effect and affinity for the T4-lymphocyte.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to HIV infection","secondary_identifiers":["OMIM:609423","MEDGEN:332156","UMLS:C1836230","NCIT:C14220"],"synonyms":[{"name":"AIDS, delayed/rapid progression to","type":"exact"},{"name":"AIDS, progression to","type":"related"},{"name":"AIDS, rapid progression to","type":"exact"},{"name":"AIDS, resistance to","type":"exact"},{"name":"AIDS, slow progression to","type":"exact"},{"name":"HIV infection, resistance to","type":"exact"},{"name":"HIV type 1, susceptibility to","type":"exact"},{"name":"HIV-1 disease, delayed progression of","type":"exact"},{"name":"HIV-1 disease, rapid progression of","type":"exact"},{"name":"HIV-1 viremia, susceptibility to","type":"exact"},{"name":"HIV-1, resistance to","type":"related"},{"name":"HIV-1, susceptibility to","type":"related"},{"name":"HIV/AIDS, susceptibility to","type":"exact"},{"name":"HIV1 infection, resistance to","type":"exact"},{"name":"HIV1, resistance to","type":"exact"},{"name":"acquired immunodeficiency syndrome, progression to","type":"related"},{"name":"human immunodeficiency virus type 1, resistance to","type":"related"},{"name":"human immunodeficiency virus type 1, susceptibility to","type":"related"},{"name":"rapid progression to AIDS from HIV1 infection","type":"exact"}],"termid":"MONDO:0004951","xrefs":{"Monarch":{"xref_id":"0004951"}}}


id: PBO:0081615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 543","termid":"PBO:0081615"}


id: PBO:0088670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L23","termid":"PBO:0088670"}


id: PBO:0003086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase (predicted)","termid":"PBO:0003086"}


id: PBO:0040188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 1","termid":"PBO:0040188"}


id: GO:0006144
data:
  {"annotated_genes":["SJAG_01814","SJAG_02364","SJAG_01070","SJAG_01661","SJAG_01997","SJAG_05287","SJAG_01859","SJAG_04299","SJAG_06634","SJAG_04297","SJAG_01081","SJAG_03140","SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71754,77080],"is_not":false,"summary":null,"term":"GO:0006144"},{"annotations":[119366,72523,112337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[99701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046083"},{"annotations":[75716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[69626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[77430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046100"},{"annotations":[60493,116505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[93635,75397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006145"},{"annotations":[73990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_01997":null,"SJAG_02364":null,"SJAG_03140":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_04300":null,"SJAG_05287":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleobase metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine base metabolic process","type":"exact"},{"name":"purine base metabolism","type":"exact"},{"name":"purine metabolic process","type":"narrow"},{"name":"purine metabolism","type":"narrow"}],"termid":"GO:0006144","terms_by_termid":{"GO:0006144":null,"GO:0006145":null,"GO:0006147":null,"GO:0006168":null,"GO:0009113":null,"GO:0009115":null,"GO:0046083":null,"GO:0046084":null,"GO:0046100":null}}


id: MONDO:0012572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sakoda complex","secondary_identifiers":["UMLS:C1970485","MESH:C567055","MEDGEN:370271","OMIM:610871"],"synonyms":[{"name":"Sakoda complex","type":"exact"},{"name":"Sakoda spectrum","type":"related"},{"name":"sphenoethmoidal encephalomeningocele agenesis of the corpus callosum and cleft lip/palate","type":"related"},{"name":"sphenoethmoidal encephalomeningocele, agenesis of the corpus callosum, and cleft Lip/palate","type":"related"}],"termid":"MONDO:0012572","xrefs":{"Monarch":{"xref_id":"0012572"}}}


id: MONDO:0017253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anterior uveitis (obsolete MONDO:0017253)","termid":"MONDO:0017253","xrefs":{"Monarch":{"xref_id":"0017253"}}}


id: MONDO:0008883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, type A2, with microcephaly","secondary_identifiers":["OMIM:211369","MESH:C565894","MEDGEN:395250","UMLS:C1859393"],"synonyms":[{"name":"brachydactyly, type A2, with microcephaly","type":"exact"}],"termid":"MONDO:0008883","xrefs":{"Monarch":{"xref_id":"0008883"}}}


id: GO:0098819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that depolarizes a postsynaptic membrane relative to its resting potential. This has an excitatory effect on the post-synaptic cell, moving the membrane potential towards the firing threshold.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane potential","termid":"GO:0060078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"depolarization of postsynaptic membrane","termid":"GO:0098819"}


id: GO:0001864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pentraxin, a member of a family of inflammatory proteins with a radially symmetric arrangement of five identical, noncovalently linked chains in a pentagonal array.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"pentraxin binding","termid":"GO:0001864"}


id: SO:0000527
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_C_cluster","synonyms":[{"name":"V D DJ C cluster","type":"exact"},{"name":"V-D-(DJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000527"}


id: GO:0035379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of carbon dioxide (CO2) from one side of a membrane to the other.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"carbon dioxide transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-1237069","Reactome:R-HSA-1237042","Reactome:R-HSA-1247645","Reactome:R-HSA-1247649"],"termid":"GO:0035379"}


id: PBO:0085240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; has a potential role in the secretory pathway; CPR4 has a paralog, CPR8, that arose from the whole genome duplication","termid":"PBO:0085240"}


id: GO:0044695
data:
  {"annotated_genes":["SJAG_00552","SJAG_01585","SJAG_03302","SJAG_01657","SJAG_04151","SJAG_02703"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66015,72890,90824,109960,114803,118391],"is_not":false,"summary":null,"term":"GO:0044695"}]},"cv_name":"cellular_component","definition":"An E3 ubiquitin ligase complex localized to the ER and Golgi membrane. In fission yeast comprises Dsc1, 2, 3 and 4. Involved in the processes of fission yeast sre1 (human SREBP) transcriptional activator proteolytic cleavage, the multivesicular body (MVB) pathway, and a post-endoplasmic reticulum pathway for protein catabolism.","definition_xrefs":["GOC:vw","PMID:21504829","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00552":null,"SJAG_01585":null,"SJAG_01657":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_04151":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Dsc E3 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044695","terms_by_termid":{"GO:0044695":null}}


id: PBO:0057792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3118-1","termid":"PBO:0057792"}


id: PBO:0083274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; deletion in cyr1 mutant results in loss of stress resistance","termid":"PBO:0083274"}


id: PATO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"},{"relation_name":"is_a","term_name":"increased quality","termid":"PATO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased intensity","synonyms":[{"name":"high intensity","type":"exact"}],"termid":"PATO:0001782"}


id: PBO:0072173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16","termid":"PBO:0072173"}


id: PBO:0088454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane-associated serine-rich cell wall sensor Mtl1/Mtl3","termid":"PBO:0088454"}


id: PBO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32 (predicted)","termid":"PBO:0002042"}


id: PBO:0078107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 13 pseudogene 1","termid":"PBO:0078107"}


id: PBO:0090812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator, C-terminal","termid":"PBO:0090812"}


id: PBO:0031733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_meiosis","termid":"PBO:0031733"}


id: PBO:0076272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 1","termid":"PBO:0076272"}


id: MONDO:0018750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete class I glucose-6-phosphate dehydrogenase deficiency (obsolete MONDO:0018750)","termid":"MONDO:0018750","xrefs":{"Monarch":{"xref_id":"0018750"}}}


id: PBO:0068955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 199, pseudogene","termid":"PBO:0068955"}


id: GO:0036522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal localization of a protein to the host phagosome. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:PARL","PMID:25063865","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host protein localization to phagocytic vesicle","synonyms":[{"name":"disruption of host protein localisation to phagosome","type":"exact"},{"name":"inhibition of host protein localisation to phagosome","type":"exact"},{"name":"negative regulation by symbiont of host protein localization to phagocytic vesicle","type":"exact"},{"name":"suppression of host protein localisation to phagosome","type":"exact"}],"termid":"GO:0036522"}


id: PBO:0072884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding factor 2","termid":"PBO:0072884"}


id: PBO:0000426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z5","termid":"PBO:0000426"}


id: PR:Q8WZJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A C-1-tetrahydrofolate synthase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02532","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolate synthase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.16","secondary_identifiers":["UniProtKB:Q8WZJ7"],"synonyms":[{"name":"C1-THF synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTHFD1","type":"exact"}],"termid":"PR:Q8WZJ7"}


id: GO:0018331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-serine to form O-phospho-L-serine.","definition_xrefs":["RESID:AA0037"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-phospho-L-serine (obsolete GO:0018331)","termid":"GO:0018331"}


id: PBO:0059095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 1","termid":"PBO:0059095"}


id: PBO:0090674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex subunit Ufd1","termid":"PBO:0090674"}


id: GO:0018711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoyl acetyl-CoA + CoA = acetyl-CoA + benzoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"benzoyl acetate-CoA thiolase activity","secondary_identifiers":["MetaCyc:RXN-2006"],"termid":"GO:0018711"}


id: PBO:0052802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 42, pseudogene","termid":"PBO:0052802"}


id: PBO:0076332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 1","termid":"PBO:0076332"}


id: PBO:0080034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 20","termid":"PBO:0080034"}


id: MONDO:0030034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, progressive myoclonic, 11","secondary_identifiers":["MEDGEN:1716712","OMIM:618876","UMLS:C5394362"],"synonyms":[{"name":"EPILEPSY, PROGRESSIVE MYOCLONIC, 11","type":"exact"},{"name":"EPM11","type":"exact"},{"name":"epilepsy, progressive myoclonic, 11","type":"exact"}],"termid":"MONDO:0030034","xrefs":{"Monarch":{"xref_id":"0030034"}}}


id: MONDO:0859190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurodevelopmental-craniofacial syndrome with variable renal and cardiac abnormalities","secondary_identifiers":["OMIM:619522","MEDGEN:1794194","UMLS:C5561984"],"synonyms":[{"name":"ZMYM2-related neurodevelopmental disorder with multiple anomalies","type":"exact"}],"termid":"MONDO:0859190","xrefs":{"Monarch":{"xref_id":"0859190"}}}


id: PBO:0081872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 814","termid":"PBO:0081872"}


id: PBO:0091453
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Queuosine Nucleoside Glycosylase","termid":"PBO:0091453"}


id: PBO:0067610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 782, pseudogene","termid":"PBO:0067610"}


id: PBO:0069660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 937, pseudogene","termid":"PBO:0069660"}


id: MONDO:0008389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant Robinow syndrome (DRS) is the more common type of Robinow syndrome (RS) characterized by mild to moderate limb shortening and abnormalities of the head, face and external genitalia.","definition_xrefs":["Orphanet:3107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Robinow syndrome","termid":"MONDO:0019978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Robinow syndrome","secondary_identifiers":["icd11.foundation:807338758","ICD9:759.89","MEDGEN:1675001","UMLS:C5200540","GARD:16620","SCTID:76520005"],"synonyms":[{"name":"Robinow syndrome, autosomal dominant","type":"exact"},{"name":"Robinow syndrome, autosomal dominant type","type":"exact"},{"name":"autosomal dominant Robinow syndrome","type":"exact"}],"termid":"MONDO:0008389","xrefs":{"Monarch":{"xref_id":"0008389"}}}


id: PBO:0044524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dachshund family transcription factor 1","termid":"PBO:0044524"}


id: PBO:0108693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Tbc13","termid":"PBO:0108693"}


id: GO:0010612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"cardiac muscle adaptation","termid":"GO:0014887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle adaptation","termid":"GO:0010612"}


id: PATO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to form multiple differentiated cell types.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Multipotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multipotent","termid":"PATO:0001402"}


id: FYPO:0002313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ergosterol measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular ergosterol level","termid":"FYPO:0002321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"ergosterol absent from cell","synonyms":[{"name":"ergosterol absent from cell during mitotic cell cycle","type":"related"},{"name":"ergosterol absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002313"}


id: PR:Q9UUB3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUB3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.11","synonyms":[{"name":"Spom972h-meu18","type":"exact"}],"termid":"PR:Q9UUB3"}


id: PBO:0088932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylceramide biosynthesis protein Cwh43","termid":"PBO:0088932"}


id: GO:0099118
data:
  {"annotated_genes":["SJAG_01546","SJAG_01224","SJAG_01371","SJAG_00918","SJAG_05266","SJAG_02336","SJAG_03540","SJAG_01775","SJAG_02761","SJAG_01297","SJAG_03437","SJAG_05319","SJAG_02731","SJAG_00851","SJAG_05220","SJAG_01211"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[120698,102294,105826,110226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[111864,100520,116094,91591,110853,92830,90984,102432,118924,109459,98667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"A microtubule-based process that results in the transport of proteins.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02336":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"microtubule-based protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099118","terms_by_termid":{"GO:0099117":null,"GO:0140210":null,"GO:1990976":null}}


id: PBO:0074531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA E","termid":"PBO:0074531"}


id: _global:increased_in_magnitude_relative_to
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"different_in_magnitude_relative_to","termid":"_global:different_in_magnitude_relative_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_in_magnitude_relative_to","termid":"_global:increased_in_magnitude_relative_to"}


id: FYPO:0003746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in heterochromatin islands occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at heterochromatin island during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9me at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0003746"}


id: PBO:0028229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_trehalose_level_during_cellular_response_to_salt_stress","termid":"PBO:0028229"}


id: PBO:0049699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUWE1 associated protein modifying stress responses","termid":"PBO:0049699"}


id: MONDO:0002464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the lacrimal gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal system cancer","termid":"MONDO:0002460"},{"relation_name":"is_a","term_name":"lacrimal gland neoplasm","termid":"MONDO:0021222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"lacrimal gland cancer","secondary_identifiers":["SCTID:127004000","UMLS:C0153627","ICD9:190.2","MEDGEN:56315","DOID:294","ICD9:239.89","NCIT:C3563"],"synonyms":[{"name":"cancer of lacrimal gland","type":"exact"},{"name":"lacrimal gland cancer","type":"exact"},{"name":"malignant lacrimal gland neoplasm","type":"exact"},{"name":"malignant lacrimal gland tumor","type":"exact"},{"name":"malignant lacrimal gland tumour","type":"exact"},{"name":"malignant neoplasm of lacrimal gland","type":"exact"},{"name":"malignant neoplasm of the lacrimal gland","type":"exact"},{"name":"malignant tumor of lacrimal gland","type":"exact"},{"name":"malignant tumor of the lacrimal gland","type":"exact"},{"name":"malignant tumour of lacrimal gland","type":"exact"},{"name":"malignant tumour of the lacrimal gland","type":"exact"},{"name":"tumor of the lacrimal gland","type":"broad"},{"name":"tumour of the lacrimal gland","type":"broad"}],"termid":"MONDO:0002464","xrefs":{"Monarch":{"xref_id":"0002464"}}}


id: GO:2000187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphate transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inorganic anion transmembrane transport","termid":"GO:1903797"},{"relation_name":"is_a","term_name":"regulation of phosphate transmembrane transport","termid":"GO:2000185"},{"relation_name":"positively_regulates","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phosphate transmembrane transport","synonyms":[{"name":"positive regulation of phosphate membrane transport","type":"exact"}],"termid":"GO:2000187"}


id: FYPO:0007910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell size phenotype in which a vegetative cell has a reduced volume or dimensions compared to a size previously observed for the same cell.","definition_xrefs":["PomBase:vw","PMID:19189958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased vegetative cell shrinkage","termid":"FYPO:0007910"}


id: PBO:0067690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal N2","termid":"PBO:0067690"}


id: GO:1903114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of silver ion transmembrane transporter activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","PMID:11283292","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"silver ion transmembrane transporter complex","termid":"GO:1903114"}


id: PBO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 heme lyase (predicted)","termid":"PBO:0001850"}


id: MONDO:0006726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired abnormality characterized by elevation of the hemidiaphragm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diaphragm disorder","termid":"MONDO:0005728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic eventration","secondary_identifiers":["DOID:10480","SCTID:34168003","HP:0009110","MEDGEN:8359","MESH:D003965","UMLS:C0011981","NCIT:C98912","EFO:1000898"],"synonyms":[{"name":"diaphragmatic eventration","type":"exact"},{"name":"diaphragmatic eventration (disease)","type":"exact"}],"termid":"MONDO:0006726","xrefs":{"Monarch":{"xref_id":"0006726"}}}


id: PBO:0059065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB family member 4, phocein","termid":"PBO:0059065"}


id: FYPO:0007483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic spindle pole body duplication is abnormal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:27889481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle pole body duplication","termid":"FYPO:0007258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic spindle pole body duplication during meiosis I","synonyms":[{"name":"abnormal meiotic SPB duplication during meiosis I","type":"exact"},{"name":"abnormal meiotic spindle pole body duplication during first meiotic nuclear division","type":"exact"},{"name":"abnormal spindle pole body duplication during meiosis I","type":"exact"}],"termid":"FYPO:0007483"}


id: PBO:0034572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_telomerase_RNA_reverse_transcriptase_activity","termid":"PBO:0034572"}


id: MONDO:0001377
data:
  {"annotated_genes":["SJAG_02878","SJAG_02286","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[88286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[88982,88981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous disorder","termid":"MONDO:0004860"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02286":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitreous syneresis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0155366","ICD9:379.21","MEDGEN:509938","SCTID:60189009","DOID:11816"],"synonyms":[{"name":"vitreous degeneration","type":"exact"}],"termid":"MONDO:0001377","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null,"MONDO:0100119":null},"xrefs":{"Monarch":{"xref_id":"0001377"}}}


id: PBO:0083654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease involved in processing DNA; acts during recombination, repair; promotes template switching during break-induced replication (BIR), causing non-reciprocal translocations (NRTs); cleaves branched structures in complex with Slx1p; involved in interstrand cross-link repair, Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during DSBR via single-strand annealing; relative distribution to nuclear foci increases upon DNA replication stress; FANCP-related factor","termid":"PBO:0083654"}


id: GO:0071764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear outer membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"nuclear outer membrane organization","synonyms":[{"name":"nuclear outer membrane organisation","type":"exact"},{"name":"nuclear outer membrane organization and biogenesis","type":"related"}],"termid":"GO:0071764"}


id: GO:0004751
data:
  {"annotated_genes":["SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76310],"is_not":false,"summary":null,"term":"GO:0004751"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: aldehydo-D-ribose 5-phosphate = D-ribulose 5-phosphate.","definition_xrefs":["RHEA:14657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ribose-5-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RIB5PISOM-RXN","Reactome:R-HSA-5660015","KEGG_REACTION:R01056","Reactome:R-HSA-71306","Reactome:R-HSA-5660013","EC:5.3.1.6","Reactome:R-HSA-177784"],"synonyms":[{"name":"5-phosphoribose isomerase activity","type":"exact"},{"name":"D-ribose 5-phosphate isomerase activity","type":"exact"},{"name":"D-ribose-5-phosphate aldose-ketose-isomerase activity","type":"exact"},{"name":"D-ribose-5-phosphate ketol-isomerase activity","type":"exact"},{"name":"pentose phosphate isomerase (PPI)","type":"exact"},{"name":"phosphopentoseisomerase activity","type":"exact"},{"name":"phosphopentosisomerase activity","type":"exact"},{"name":"phosphoriboisomerase activity","type":"exact"},{"name":"ribose 5-phosphate epimerase activity","type":"exact"},{"name":"ribose phosphate isomerase activity","type":"exact"}],"termid":"GO:0004751","terms_by_termid":{"GO:0004751":null}}


id: GO:0003250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell proliferation that contributes to the shaping of a heart valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000136"},{"relation_name":"regulates","term_name":"cell proliferation involved in heart valve morphogenesis","termid":"GO:0003249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in heart valve morphogenesis","termid":"GO:0003250"}


id: MONDO:0004213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the vulva and is characterized by the absence of keratin pearls.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar squamous cell carcinoma","termid":"MONDO:0024609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar non-keratinizing squamous cell carcinoma","secondary_identifiers":["UMLS:C1520092","DOID:7409","MEDGEN:311488","NCIT:C40285"],"termid":"MONDO:0004213","xrefs":{"Monarch":{"xref_id":"0004213"}}}


id: PBO:0078289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 22-1","termid":"PBO:0078289"}


id: PBO:0013790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumerate reductase Osm1 (predicted)","termid":"PBO:0013790"}


id: FYPO:0001106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione-disulfide reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000661","FYPO:0000002","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal glutathione-disulfide reductase activity","synonyms":[{"name":"abnormal glutathione-disulphide reductase activity","type":"exact"}],"termid":"FYPO:0001106"}


id: PBO:0065842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9B, member RAS oncogene family pseudogene 1","termid":"PBO:0065842"}


id: PR:Q01112
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 42 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 42 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC110.03","secondary_identifiers":["UniProtKB:Q01112"],"synonyms":[{"name":"CDC42Sp (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDC42","type":"exact"}],"termid":"PR:Q01112"}


id: PBO:0087249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine MAP kinase; coordinates expression of all 19S regulatory particle assembly-chaperones (RACs) to control proteasome abundance; involved in regulating maintenance of cell wall integrity, cell cycle progression, nuclear mRNA retention in heat shock, septum assembly; required for mitophagy, pexophagy; affects recruitment of mitochondria to phagophore assembly site; plays role in adaptive response of cells to cold; regulated by the PKC1-mediated signaling pathway","termid":"PBO:0087249"}


id: GO:0044340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contributes to modulating the rate or frequency of cell proliferation.","definition_xrefs":["GOC:jl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of cell proliferation (obsolete GO:0044340)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of cell proliferation","type":"exact"}],"termid":"GO:0044340"}


id: PBO:0089764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-2,6-bisphosphate 2-phosphatase activity","termid":"PBO:0089764"}


id: PBO:0017417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transformed_into","termid":"PBO:0017417"}


id: FYPO:0003869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the amount of protein encoded by genes normally induced by exposure to hydrogen peroxide measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PMID:20133687","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during G0","termid":"FYPO:0003866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased level of hydrogen peroxide-induced proteins during G0","synonyms":[{"name":"increased level of H2O2-induced proteins during G0","type":"exact"},{"name":"increased level of hydrogen peroxide-induced proteins during cell quiescence","type":"exact"},{"name":"increased level of hydrogen peroxide-induced proteins during quiescence","type":"exact"},{"name":"increased level of proteins expressed during cellular response to hydrogen peroxide during G0","type":"exact"},{"name":"increased level of proteins induced by hydrogen peroxide during G0","type":"exact"},{"name":"increased protein level of genes (normally) induced during H2O2 stress during G0","type":"exact"}],"termid":"FYPO:0003869"}


id: PBO:0070839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 18","termid":"PBO:0070839"}


id: FYPO:0007176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abolished during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane at cell division site during mitosis","synonyms":[{"name":"abolished protein localisation to plasma membrane at cell division site during mitosis","type":"exact"},{"name":"abolished protein localization in plasma membrane at cell division site during mitosis","type":"exact"},{"name":"abolished protein localization to cell membrane at cell division site during mitosis","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during mitotic M phase","type":"related"},{"name":"abolished protein localization to plasma membrane at cell division site during mitotic nuclear division","type":"exact"},{"name":"protein localization to plasma membrane at cell division site abolished during mitosis","type":"exact"}],"termid":"FYPO:0007176"}


id: PBO:0069855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1141, pseudogene","termid":"PBO:0069855"}


id: SO:1000111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that changes the amino acid sequence of the peptide in such a way that it changes the 3D structure of the molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000111 sequence_variant_affecting_3D_structure_of_polypeptide (obsolete SO:1000111)","synonyms":[{"name":"mutation affecting 3D structure of polypeptide","type":"related"},{"name":"mutation causing partially characterised 3D structural change","type":"related"},{"name":"mutation causing uncharacterised 3D structural change","type":"related"},{"name":"sequence variant affecting 3D structure of polypeptide","type":"exact"},{"name":"sequence variant affecting 3D-structure of polypeptide","type":"exact"},{"name":"sequence variant causing partially characterised 3D structural change","type":"exact"},{"name":"sequence variant causing uncharacterised 3D structural change","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_3D_structural_change","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_3D_structural_change","type":"exact"}],"termid":"SO:1000111"}


id: PBO:0071231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 72","termid":"PBO:0071231"}


id: PBO:0039292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG8 alpha-1,3-glucosyltransferase","termid":"PBO:0039292"}


id: FYPO:0000326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the stable attachment of sister chromatids to microtubules emanating from opposite poles of the mitotic spindle during metaphase plate congression is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000337","FYPO:0000641"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid biorientation","synonyms":[{"name":"abnormal sister chromatid biorientation during mitosis","type":"exact"},{"name":"abnormal sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid biorientation during vegetative growth","type":"exact"}],"termid":"FYPO:0000326"}


id: MONDO:0011204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebellar degeneration-related autoantigen 3 (obsolete MONDO:0011204)","secondary_identifiers":["OMIM:602197"],"synonyms":[{"name":"Cdr3","type":"related"},{"name":"cerebellar Degeneration-related autoantigen type 3","type":"exact"},{"name":"cerebellar degeneration-related autoantigen 3","type":"exact"}],"termid":"MONDO:0011204","xrefs":{"Monarch":{"xref_id":"0011204"}}}


id: MONDO:0015271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic camptocormia is a postural disease characterized by an anterior flexion of the torso (during walking or standing) that resolves in the supine position and that is caused by weakness of the lumbar paraspinal muscles (spinal extensors), due to massive fatty infiltrations of posterior spinal muscles, without an identifiable etiology.","definition_xrefs":["Orphanet:1320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired skeletal muscle disease","termid":"MONDO:0016105"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic camptocormia","secondary_identifiers":["UMLS:C0264162","MEDGEN:120496","SCTID:13534001","MedDRA:10069646","GARD:1063","MESH:C537968"],"synonyms":[{"name":"bent spine","type":"related"},{"name":"bent spine syndrome","type":"related"},{"name":"camptocormia","type":"related"},{"name":"camptocormism","type":"related"},{"name":"idiopathic camptocormism","type":"exact"},{"name":"idiopathic progressive lumbar kyphosis","type":"exact"}],"termid":"MONDO:0015271","xrefs":{"Monarch":{"xref_id":"0015271"}}}


id: MONDO:0032872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 42","secondary_identifiers":["OMIM:618695","DOID:0111855","MEDGEN:1684665","GARD:16373","UMLS:C5231464"],"synonyms":[{"name":"CILD42","type":"related"},{"name":"CILIARY DYSKINESIA, PRIMARY, 42","type":"related"},{"name":"Ciliary Dyskinesia, Primary, 42, Without Situs Inversus","type":"related"}],"termid":"MONDO:0032872","xrefs":{"Monarch":{"xref_id":"0032872"}}}


id: GO:0102687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + dihydrozeatin = H+ + dihydrozeatin-7-N-glucose + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:dihydrozeatin 7-N-glucosyltransferase activity (obsolete GO:0102687)","termid":"GO:0102687"}


id: GO:1901022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-hydroxyphenylacetate.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"4-hydroxyphenylacetate metabolic process","synonyms":[{"name":"4-hydroxyphenylacetate metabolism","type":"exact"}],"termid":"GO:1901022"}


id: GO:0061084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein refolding. Protein refolding is the process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein refolding","termid":"GO:0061083"},{"relation_name":"is_a","term_name":"negative regulation of protein folding","termid":"GO:1903333"},{"relation_name":"negatively_regulates","term_name":"protein refolding","termid":"GO:0042026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"},{"rel_name":"negatively_regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0006457","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein refolding","termid":"GO:0061084"}


id: PBO:0067238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 309, pseudogene","termid":"PBO:0067238"}


id: PBO:0065648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type B","termid":"PBO:0065648"}


id: PBO:0049105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR160 pseudogene 2","termid":"PBO:0049105"}


id: PBO:0075281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin family member 21","termid":"PBO:0075281"}


id: GO:0042682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a compound eye cone cell.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"regulates","term_name":"compound eye cone cell fate specification","termid":"GO:0042679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye cone cell fate specification","secondary_identifiers":["GO:0042681"],"termid":"GO:0042682"}


id: GO:0097063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of cadmium (Cd++).","definition_xrefs":["PMID:19456862","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140299","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"cadmium ion sensor activity","termid":"GO:0097063"}


id: FYPO:0008103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the preinuclear endoplasmic reticulum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:36799444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0006378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to perinuclear endoplasmic reticulum","termid":"FYPO:0008103"}


id: GO:0051212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vanadium ion (V).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"vanadium ion binding","synonyms":[{"name":"V ion binding","type":"exact"}],"termid":"GO:0051212"}


id: GO:1990562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An exosome complex that is assembled in the multivesicular body (MVB) membrane and chaperoned to the exosome by the ESCRT-III machinery.","definition_xrefs":["GOC:bhm","PMID:22660413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular exosome complex","termid":"GO:1990563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"syndecan-syntenin-ALIX complex","synonyms":[{"name":"exosome complex","type":"broad"}],"termid":"GO:1990562"}


id: GO:0072659
data:
  {"annotated_genes":["SJAG_00379","SJAG_04434","SJAG_00144","SJAG_03970","SJAG_04597","SJAG_04930","SJAG_02282","SJAG_02392","SJAG_03838","SJAG_02912","SJAG_00330","SJAG_03029","SJAG_00916","SJAG_03756","SJAG_01516","SJAG_02583","SJAG_03915","SJAG_04565","SJAG_00858","SJAG_03453","SJAG_01114","SJAG_04923","SJAG_03810","SJAG_01809","SJAG_04609","SJAG_04158"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66733,69859,91374,92398,92698,103318,116956],"is_not":false,"summary":null,"term":"GO:0072659"},{"annotations":[103042,61906,96775,67789,114776,114993,93145,120917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[97598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061951"},{"annotations":[110762,108991,71944,108363,114995,97031,79384,111551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[89919],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[96276],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[97736],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02282":null,"SJAG_02392":null,"SJAG_02583":null,"SJAG_02912":null,"SJAG_03029":null,"SJAG_03453":null,"SJAG_03756":null,"SJAG_03810":null,"SJAG_03838":null,"SJAG_03915":null,"SJAG_03970":null,"SJAG_04158":null,"SJAG_04434":null,"SJAG_04565":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04923":null,"SJAG_04930":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0072661","GO:0090002"],"synonyms":[{"name":"protein localisation in plasma membrane","type":"related"},{"name":"protein localization in plasma membrane","type":"related"},{"name":"protein targeting to plasma membrane","type":"related"},{"name":"protein-plasma membrane targeting","type":"related"}],"termid":"GO:0072659","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0061951":null,"GO:0072659":null,"GO:0099638":null,"GO:0140325":null,"GO:1903077":null}}


id: GO:0098912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which atrial cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane depolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"atrial cardiac muscle cell depolarization","type":"broad"},{"name":"atrial depolarization","type":"related"},{"name":"electrocardiogram PR interval","type":"related"}],"termid":"GO:0098912"}


id: PR:Q9US56
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pom34 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 31 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.02","synonyms":[{"name":"Spom972h-pom34","type":"exact"}],"termid":"PR:Q9US56"}


id: MONDO:0009721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nathalie syndrome is characterized by deafness, cataract, muscular atrophy, skeletal abnormalities, growth retardation, underdeveloped secondary sexual characteristics, and electrocardiographic abnormalities. It has been described in a Dutch family: in three sisters (one named Nathalie) and their brother.","definition_xrefs":["Orphanet:2663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nathalie syndrome","secondary_identifiers":["MESH:C538342","UMLS:C1850626","OMIM:255990","MEDGEN:338087","GARD:3929","SCTID:716170005"],"synonyms":[{"name":"Nathalie syndrome","type":"exact"},{"name":"deafness, cataract, muscular atrophy, skeletal abnormalities, growth retardation, underdeveloped secondary sexual characteristics","type":"related"},{"name":"deafness-cataract-skeletal anomalies syndrome","type":"exact"},{"name":"deafness-cataracts-skeletal anomalies syndrome","type":"exact"},{"name":"sensorineural hearing loss-cataract-skeletal anomalies-cardiomyopathy syndrome","type":"exact"}],"termid":"MONDO:0009721","xrefs":{"Monarch":{"xref_id":"0009721"}}}


id: PBO:0005344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Sum3","termid":"PBO:0005344"}


id: GO:0075236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of zoospore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of zoospore movement on or near host (obsolete GO:0075236)","termid":"GO:0075236"}


id: PATO:0000796
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000796 regeneration value (obsolete PATO:0000796)","termid":"PATO:0000796"}


id: GO:0050610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + H+ + methylarsonate = glutathione disulfide + H2O + methylarsonous acid.","definition_xrefs":["EC:1.20.4.2","RHEA:15969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor","termid":"GO:0030614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"methylarsonate reductase activity","secondary_identifiers":["Reactome:R-HSA-5696230","KEGG_REACTION:R05748","MetaCyc:1.20.4.2-RXN","UM-BBD_reactionID:r0837"],"synonyms":[{"name":"MMA(V) reductase activity","type":"related"},{"name":"glutathione:methylarsonate oxidoreductase activity","type":"related"}],"termid":"GO:0050610"}


id: PBO:0078951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 3-1","termid":"PBO:0078951"}


id: MONDO:0015151
data:
  {"annotated_genes":["SJAG_04228","SJAG_03470"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021018"},{"annotations":[87624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012034"}]},"cv_name":"mondo","definition":"Autosomal dominant form of limb-girdle muscular dystrophy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"limb-girdle muscular dystrophy","termid":"MONDO:0016971"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03470":null,"SJAG_04228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, limb-girdle, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:603511","MEDGEN:1826162","Orphanet:102014","UMLS:C5675009","GARD:19824","DOID:0110273","icd11.foundation:537908479"],"synonyms":[{"name":"autosomal dominant limb-girdle muscular dystrophy","type":"exact"},{"name":"limb-girdle muscular dystrophy, autosomal dominant","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal dominant","type":"exact"}],"termid":"MONDO:0015151","terms_by_termid":{"MONDO:0012034":null,"MONDO:0021018":null},"xrefs":{"Monarch":{"xref_id":"0015151"}}}


id: PBO:0113177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin beta; bidirectional nuclear transport receptor (biportin) that shuttles distinct sets of cargoes in opposite directions; responsible for import of Toa1p-Toa2p complex into nucleus; depletes eIF5A and eEF2 from cell nuclei; binds to nucleoporins Nup1p and Nup2p; may play a role in regulation of pleiotropic drug resistance","termid":"PBO:0113177"}


id: PBO:0004580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Pgp2","termid":"PBO:0004580"}


id: PBO:0074235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 48 member 1","termid":"PBO:0074235"}


id: PBO:0061974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AM member 1 pseudogene","termid":"PBO:0061974"}


id: GO:0061671
data:
  {"annotated_genes":["SJAG_04560"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60989],"is_not":false,"summary":null,"term":"GO:0061671"}]},"cv_name":"cellular_component","definition":"A protein complex located at the mitochondrial ribosome tunnel exit that is involved in efficient translation and protein complex assembly.","definition_xrefs":["GOC:dph","GOC:rb","PMID:21670217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Cbp3p-Cbp6 complex","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0061671","terms_by_termid":{"GO:0061671":null}}


id: PBO:0041661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 6","termid":"PBO:0041661"}


id: PBO:0059184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Morf4 family associated protein 1","termid":"PBO:0059184"}


id: GO:0039541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of RIG-I (also known as DDX58) by binding to RIG-I itself.","definition_xrefs":["PMID:20007272","VZ:856","PMID:19193793"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host RIG-I via RIG-I binding (obsolete GO:0039541)","synonyms":[{"name":"inhibition by virus of host DDX58:MAVS binding","type":"exact"}],"termid":"GO:0039541"}


id: MONDO:1012278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"tremor, non-human animal","termid":"MONDO:1011861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, chicken","secondary_identifiers":["OMIA:001016-9031"],"termid":"MONDO:1012278","xrefs":{"Monarch":{"xref_id":"1012278"}}}


id: PBO:0040476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 1","termid":"PBO:0040476"}


id: GO:0010795
data:
  {"annotated_genes":["SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquinone biosynthesis. Ubiquinone biosynthesis consists of the chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006744"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006744","GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010795","terms_by_termid":{"GO:1904775":null}}


id: MONDO:0020283
data:
  {"annotated_genes":["SJAG_01756","SJAG_00856"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009624"},{"annotations":[87089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014592"}]},"cv_name":"mondo","definition":"An inflammatory process affecting a part of or the entire uvea. Causes include inflammatory agents (e.g., herpes simplex, herpes zoster, leptospirosis) and systemic diseases (e.g., inflammatory bowel disease, multiple sclerosis, systemic lupus erythematosus, ankylosing spondylitis). Patients present with pain and redness in the eye, light sensitivity, and blurred and decreased vision.","definition_xrefs":["NCIT:C26909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveal disorder","termid":"MONDO:0002661"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"uveitis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10046851","EFO:1001231","HP:0000554","DOID:13141","MEDGEN:52961","Orphanet:98715","SCTID:128473001","MESH:D014605","UMLS:C0042164","GARD:19549"],"synonyms":[{"name":"inflammation of uvea","type":"exact"},{"name":"uvea inflammation","type":"exact"},{"name":"uveitis","type":"exact"},{"name":"uveitis (disease)","type":"exact"}],"termid":"MONDO:0020283","terms_by_termid":{"MONDO:0009624":null,"MONDO:0014592":null},"xrefs":{"Monarch":{"xref_id":"0020283"}}}


id: MONDO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangiopericytoma arising from the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney hemangiopericytoma","secondary_identifiers":["NCIT:C4527","UMLS:C5848097","DOID:262","SCTID:254923001","MEDGEN:1847044"],"synonyms":[{"name":"hemangiopericytoma of kidney","type":"exact"},{"name":"hemangiopericytoma of the kidney","type":"exact"},{"name":"kidney hemangiopericytoma","type":"exact"},{"name":"kidney spindle cell tumor","type":"exact"},{"name":"kidney spindle cell tumour","type":"exact"},{"name":"renal hemangiopericytoma","type":"exact"}],"termid":"MONDO:0002365","xrefs":{"Monarch":{"xref_id":"0002365"}}}


id: MONDO:0010174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Valinemia is a very rare metabolic disorder characterized by abnormally high levels of the amino acid valine in the blood and urine.Infants with valinemia reportedly experience lack of appetite, vomiting, and failure to thrive. In some cases, the condition may be life-threatening. Low muscle tone (hypotonia), excessive drowsiness, hyperactivity, and developmental delay have also been reported. Valinemia is caused by a deficiency of the enzymevaline transaminase, which is needed for the breakdown (metabolism) of valine in the body. It is inherited in an autosomal recessive manner, although the gene responsible for the condition is not yet known. Treatment includes adiet low in valine (introduced during early infancy) which usually improves symptoms and brings valine levels to normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Valinemia","secondary_identifiers":["UMLS:C0268573","MESH:C536524","MEDGEN:120652","OMIM:277100","SCTID:47719001"],"synonyms":[{"name":"Valinemia","type":"exact"},{"name":"hypervalinemia","type":"related"},{"name":"valine transaminase deficiency","type":"related"}],"termid":"MONDO:0010174","xrefs":{"Monarch":{"xref_id":"0010174"}}}


id: FYPO:0001757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphatase activity","termid":"FYPO:0001756"},{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein phosphatase activity","synonyms":[{"name":"decreased phosphoprotein phosphatase activity","type":"exact"},{"name":"reduced protein phosphatase activity","type":"exact"}],"termid":"FYPO:0001757"}


id: FYPO:0003267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of acid phosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phosphatase activity","termid":"FYPO:0004469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal acid phosphatase activity","termid":"FYPO:0003267"}


id: GO:0090435
data:
  {"annotated_genes":["SJAG_02210","SJAG_02757"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76917,78738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036228"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location within a nuclear envelope.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02210":null,"SJAG_02757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to nuclear envelope","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"protein localization in nuclear envelope","type":"exact"}],"termid":"GO:0090435","terms_by_termid":{"GO:0036228":null}}


id: GO:0048793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephros over time, from its formation to the mature structure. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["PMID:15968585","PMID:18322540","XAO:00002000","GOC:bf","ZFA:0000151","PMID:10535314","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros development","synonyms":[{"name":"pronephric kidney development","type":"exact"}],"termid":"GO:0048793"}


id: SO:0001132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type I (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, -90 degrees < psi +120 degrees < +40 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_right_handed_type_one","secondary_identifiers":["BS:00207"],"synonyms":[{"name":"asx turn type right handed type one","type":"exact"},{"name":"asx_turn_ir","type":"exact"}],"termid":"SO:0001132"}


id: GO:0034876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isoniazid + H2O = isonicotinate + hydrazine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete isonicotinic acid hydrazide hydrolase activity (obsolete GO:0034876)","termid":"GO:0034876"}


id: MONDO:0005588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation and ulceration of the oral mucosa as a result of chemotherapy treatment.","definition_xrefs":["EFO:0006313"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disease","termid":"MONDO:0000001"},{"relation_name":"is_a","term_name":"stomatitis","termid":"MONDO:0004842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemotherapy-induced oral mucositis","secondary_identifiers":["MEDGEN:853868","UMLS:C2887631"],"termid":"MONDO:0005588","xrefs":{"Monarch":{"xref_id":"0005588"}}}


id: MONDO:0010967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the TMC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 7","secondary_identifiers":["DOID:0110520","UMLS:C1832978","MEDGEN:322084","GARD:22587","MESH:C563417","OMIM:600974"],"synonyms":[{"name":"DFNB11","type":"narrow"},{"name":"DFNB7","type":"narrow"},{"name":"TMC1 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 7","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 7","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in TMC1","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 7","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 7","type":"exact"},{"name":"deafness, autosomal recessive 11","type":"narrow"},{"name":"deafness, autosomal recessive 7","type":"narrow"},{"name":"deafness, autosomal recessive type 7","type":"narrow"}],"termid":"MONDO:0010967","xrefs":{"Monarch":{"xref_id":"0010967"}}}


id: PBO:0071968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase B1","termid":"PBO:0071968"}


id: PR:Q10202
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.06","synonyms":[{"name":"Spom972h-dbp3","type":"exact"}],"termid":"PR:Q10202"}


id: MONDO:0010694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus, myoclonic","secondary_identifiers":["OMIM:310800","MESH:C564088","UMLS:C1839579","MEDGEN:326918"],"synonyms":[{"name":"myoclonic nystagmus","type":"related"},{"name":"nystagmus, myoclonic","type":"exact"}],"termid":"MONDO:0010694","xrefs":{"Monarch":{"xref_id":"0010694"}}}


id: GO:1990883
data:
  {"annotated_genes":["SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74159],"is_not":false,"summary":null,"term":"GO:1990883"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in 18S rRNA + acetyl-CoA + ATP + H2O = an N(4)-acetylcytidine in 18S rRNA + ADP + phosphate + CoA + H+.","definition_xrefs":["RHEA:51424","PMID:25402480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"18S rRNA cytidine N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990883","terms_by_termid":{"GO:1990883":null}}


id: PBO:0076580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 4","termid":"PBO:0076580"}


id: FYPO:0003382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular acetate level","synonyms":[{"name":"increased acetate accumulation","type":"related"},{"name":"increased cellular acetate level during mitotic cell cycle","type":"related"},{"name":"increased cellular acetate level during vegetative growth","type":"exact"}],"termid":"FYPO:0003382"}


id: PBO:0064708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 44","termid":"PBO:0064708"}


id: PBO:0088078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease that cleaves Ub-protein fusions; UBP13 has a paralog, UBP9, that arose from the whole genome duplication","termid":"PBO:0088078"}


id: MONDO:0800404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the PCARE gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"PCARE-related retinopathy","termid":"MONDO:0800404","xrefs":{"Monarch":{"xref_id":"0800404"}}}


id: PBO:0064349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin B3","termid":"PBO:0064349"}


id: MONDO:0012123
data:
  {"annotated_genes":["SJAG_02903"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88263],"is_not":false,"summary":null,"term":"MONDO:0012123"}]},"cv_name":"mondo","definition":"The CDG (Congenital Disorders of Glycosylation) syndromes are a group of autosomal recessive disorders affecting glycoprotein synthesis. CDG syndrome type Ie is characterized by psychomotor delay, seizures, hypotonia, facial dysmorphism and microcephaly. Ocular anomalies are also very common.","definition_xrefs":["Orphanet:79322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation type 1E","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1837396","MESH:C535743","DOID:0080557","OMIM:608799","MEDGEN:324784","GARD:9831","NCIT:C126871","SCTID:725078006"],"synonyms":[{"name":"CDG 1E","type":"related"},{"name":"CDG Ie","type":"related"},{"name":"CDG syndrome type Ie","type":"exact"},{"name":"CDG-Ie","type":"exact"},{"name":"CDG1E","type":"exact"},{"name":"CDGIe","type":"exact"},{"name":"DPM1 congenital disorder of glycosylation","type":"exact"},{"name":"DPM1-CDG","type":"related"},{"name":"DPM1-CDG (CDG-Ie)","type":"related"},{"name":"Dol-P-mannosyltransferase deficiency","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ie","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1E","type":"related"},{"name":"congenital disorder of glycosylation caused by mutation in DPM1","type":"exact"},{"name":"congenital disorder of glycosylation type 1E","type":"exact"},{"name":"congenital disorder of glycosylation type 1e","type":"exact"},{"name":"congenital disorder of glycosylation type Ie","type":"exact"},{"name":"congenital disorder of glycosylation, type Ie","type":"related"}],"termid":"MONDO:0012123","terms_by_termid":{"MONDO:0012123":null},"xrefs":{"Monarch":{"xref_id":"0012123"}}}


id: GO:0048312
data:
  {"annotated_genes":["SJAG_01741","SJAG_00655","SJAG_04003","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78072,78216,109163,109379],"is_not":false,"summary":null,"term":"GO:0048312"}]},"cv_name":"biological_process","definition":"Any process that establishes the spatial arrangement of mitochondria within the cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion distribution","termid":"GO:0048311"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00655":null,"SJAG_01741":null,"SJAG_02848":null,"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"intracellular distribution of mitochondria","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondria positioning within cell","type":"exact"},{"name":"mitochondrion positioning within cell","type":"exact"}],"termid":"GO:0048312","terms_by_termid":{"GO:0048312":null}}


id: GO:0035380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD(P)+ = 3-oxoacyl-CoA + NAD(P)H + H+, where the acyl group is a very long-chain fatty acid residue. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"very long-chain-3-hydroxyacyl-CoA dehydrogenase activity","synonyms":[{"name":"very-long-chain-3-hydroxyacyl-CoA dehydrogenase activity","type":"exact"}],"termid":"GO:0035380"}


id: PBO:0090785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, pyruvate Mpc2","termid":"PBO:0090785"}


id: MONDO:0011776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic Infantile Neurological, Cutaneous, and Articular (CINCA) syndrome is characterized by skin rash, joint involvement, chronic meningitis with granulocytes and, in some cases, sensorineural hearing loss and ocular signs.","definition_xrefs":["Orphanet:1451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"cryopyrin-associated periodic syndrome","termid":"MONDO:0016168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"CINCA syndrome","secondary_identifiers":["GARD:1356","NORD:1496","ICD9:759.89","DOID:0090029","NANDO:2201066","UMLS:C0409818","OMIM:607115","NCIT:C116380","MEDGEN:98370","SCTID:239826001","NANDO:1200468"],"synonyms":[{"name":"CINCA","type":"related"},{"name":"CINCA syndrome","type":"exact"},{"name":"CINCA/NOMID","type":"exact"},{"name":"Cryopyrin-associated periodic syndrome 3","type":"related"},{"name":"IOMID","type":"related"},{"name":"IOMID syndrome","type":"exact"},{"name":"NOMID","type":"exact"},{"name":"NOMID syndrome","type":"exact"},{"name":"Neonatal-Onset Multisystem Inflammatory Disease","type":"exact"},{"name":"Prieur Griscelli syndrome","type":"related"},{"name":"Prieur-Griscelli syndrome","type":"exact"},{"name":"chronic infantile neurological cutaneous and articular syndrome","type":"exact"},{"name":"chronic infantile neurological cutaneous articular syndrome","type":"exact"},{"name":"chronic neurologic cutaneous and articular syndrome","type":"exact"},{"name":"cryopyrin-associated periodic syndrome 3","type":"exact"},{"name":"infantile onset multisystem inflammatory disease","type":"related"},{"name":"infantile-onset multisystem inflammatory disease","type":"exact"},{"name":"multisystem inflammatory disease, neonatal-onset","type":"related"},{"name":"neonatal onset multisystem inflammatory disease","type":"related"},{"name":"neonatal-onset multisystem inflammatory disease","type":"exact"}],"termid":"MONDO:0011776","xrefs":{"Monarch":{"xref_id":"0011776"}}}


id: PBO:0072303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25","termid":"PBO:0072303"}


id: PBO:0048047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 5","termid":"PBO:0048047"}


id: GO:2000175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pro-T cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"negative regulation of lymphoid progenitor cell differentiation","termid":"GO:1905457"},{"relation_name":"is_a","term_name":"regulation of pro-T cell differentiation","termid":"GO:2000174"},{"relation_name":"negatively_regulates","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pro-T cell differentiation","synonyms":[{"name":"negative regulation of pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:2000175"}


id: GO:0019323
data:
  {"annotated_genes":["SJAG_04660","SJAG_02010","SJAG_03174","SJAG_04276","SJAG_03958"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96898,97632,103094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[58918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[96900,97633,103095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[121057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03174":null,"SJAG_03958":null,"SJAG_04276":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pentose catabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pentose breakdown","type":"exact"},{"name":"pentose catabolism","type":"exact"},{"name":"pentose degradation","type":"exact"}],"termid":"GO:0019323","terms_by_termid":{"GO:0005998":null,"GO:0019303":null,"GO:0019568":null,"GO:0042843":null}}


id: PBO:0048589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain family member 3","termid":"PBO:0048589"}


id: GO:0072210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephron in the metanephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron development","secondary_identifiers":["Reactome:R-HSA-9831926"],"termid":"GO:0072210"}


id: PBO:0056905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIF4GD divergent transcript","termid":"PBO:0056905"}


id: GO:0003961
data:
  {"annotated_genes":["SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051009"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-acetyl-L-homoserine + methanethiol = L-methionine + acetate. Also reacts with other thiols and H2S, producing homocysteine or thioethers.","definition_xrefs":["EC:2.5.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"O-acetylhomoserine aminocarboxypropyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019282","MetaCyc:O-ACETYLHOMOSERINE-THIOL-LYASE-RXN"],"synonyms":[{"name":"L-methionine anabolism, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"L-methionine biosynthetic process, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"L-methionine formation, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"L-methionine synthesis, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"O-acetyl-L-homoserine acetate-lyase (adding methanethiol) activity","type":"related"},{"name":"O-acetyl-L-homoserine sulfhydrolase activity","type":"related"},{"name":"O-acetyl-L-homoserine:methanethiol 3-amino-3-carboxypropyltransferase activity","type":"related"},{"name":"O-acetylhomoserine (thiol)-lyase activity","type":"exact"},{"name":"O-acetylhomoserine sulfhydrolase activity","type":"related"},{"name":"OAH sulfhydrylase activity","type":"related"},{"name":"methionine biosynthetic process, direct, from O-acetyl-L-homoserine","type":"exact"}],"termid":"GO:0003961","terms_by_termid":{"GO:0051009":null}}


id: GO:0022025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of leukemia inhibitory factor to its receptor on the surface of the target cell, that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:cls","GO_REF:0000021","GOC:signaling","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia inhibitory factor signaling pathway","termid":"GO:0048861"},{"relation_name":"part_of","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"leukemia inhibitory factor signaling pathway involved in forebrain neuron fate commitment","synonyms":[{"name":"leukemia inhibitory factor signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0022025"}


id: PBO:0031668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_protein_transport","termid":"PBO:0031668"}


id: PBO:0011964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialr to S. pombe SPAC186.09","termid":"PBO:0011964"}


id: GO:0042715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of proteins on DNA to form the complex that mediates dosage compensation on both X chromosomes in the monogametic sex, ultimately resulting in a two-fold reduction in transcription from these chromosomes. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["PMID:12672493","PMID:11102361","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete dosage compensation complex assembly involved in dosage compensation by hypoactivation of X chromosome (obsolete GO:0042715)","synonyms":[{"name":"dosage compensation complex assembly during dosage compensation by hypoactivation of X chromosome","type":"related"}],"termid":"GO:0042715"}


id: MONDO:0008101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial supernumerary nipples is a rare breast malformation characterized by the presence, in various members of a single family, of one or more nipple(s) and/or their related tissue, in addition to the normal bilateral chest nipples. The anomaly is usually situated along the embryonic milk line, from axillae to inguinal regions, but other locations are also possible. Association with dental abnormalities, Becker nevus, renal or underlying breast tissue malignancy and genitourinary malformations has been reported.","definition_xrefs":["Orphanet:2456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"supernumerary breasts","termid":"MONDO:0015854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial supernumerary nipples","secondary_identifiers":["OMIM:163700","MEDGEN:120564","GARD:2259","UMLS:C0266011"],"synonyms":[{"name":"accessory nipples","type":"related"},{"name":"isolated polythelia","type":"exact"},{"name":"nipples, supernumerary","type":"related"},{"name":"polymastia","type":"related"},{"name":"polythelia, familial","type":"related"}],"termid":"MONDO:0008101","xrefs":{"Monarch":{"xref_id":"0008101"}}}


id: GO:0034794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyclopropanecarboxyl-CoA = crotonoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r1057"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclopropanecarboxyl-CoA decyclase activity (obsolete GO:0034794)","termid":"GO:0034794"}


id: PBO:0067514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 655, pseudogene","termid":"PBO:0067514"}


id: MONDO:0043555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diarrhea occurring in infants from newborn to 24-months old.","definition_xrefs":["MESH:D003968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysentery","termid":"MONDO:0001517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"infantile diarrhea","secondary_identifiers":["MEDGEN:8361","SCTID:39963006","UMLS:C0011992"],"synonyms":[{"name":"Diarrheas, infantile","type":"related"},{"name":"diarrheal disease of infancy","type":"exact"},{"name":"infantile Diarrheas","type":"related"},{"name":"infantile diarrhea","type":"exact"},{"name":"infantile diarrheal disease","type":"exact"},{"name":"infantile onset diarrheal disease","type":"exact"},{"name":"toddler diarrhea","type":"exact"},{"name":"toddler diarrhoea","type":"exact"}],"termid":"MONDO:0043555","xrefs":{"Monarch":{"xref_id":"0043555"}}}


id: PBO:0049900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 1","termid":"PBO:0049900"}


id: PBO:0110403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prion protein (Kanno blood group)","termid":"PBO:0110403"}


id: GO:0010730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of hydrogen peroxide biosynthesis. The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:hjd","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrogen peroxide metabolic process","termid":"GO:0010727"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide biosynthetic process","termid":"GO:0010728"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species biosynthetic process","termid":"GO:1903427"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide biosynthetic process","termid":"GO:0050665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide biosynthetic process","synonyms":[{"name":"negative regulation of hydrogen peroxide biosynthesis","type":"exact"}],"termid":"GO:0010730"}


id: PBO:0043600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer associated 1","termid":"PBO:0043600"}


id: GO:0051841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of cytolysis of symbiont cells (obsolete GO:0051841)","synonyms":[{"name":"activation by host of cytolysis of symbiont cells","type":"narrow"},{"name":"stimulation by host of cytolysis of symbiont cells","type":"narrow"},{"name":"up regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"up-regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"upregulation by host of cytolysis of symbiont cells","type":"exact"}],"termid":"GO:0051841"}


id: PBO:0080057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP27X divergent transcript","termid":"PBO:0080057"}


id: MOD:00335
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-threonine residue by a thioether bond to form (2S,3S,2'R)-3-methyllanthionine sulfoxide.","definition_xrefs":["RESID:AA0330","PubMed:7737178","PubMed:9219543"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"3-methyllanthionine","termid":"MOD:01981"},{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"(2S,3S,2'R)-3-methyllanthionine sulfoxide","synonyms":[{"name":"(2S,3S,4Xi,6R)-2,6-diamino-3-methyl-4-oxo-4-thiaheptanedioic acid","type":"exact"},{"name":"(2S,3S,SXi)-2-amino-3-([(R)-2-amino-2-carboxyethyl]sulfinyl)butanoic acid","type":"exact"},{"name":"3-methyl-L-lanthionine S-oxide","type":"exact"},{"name":"3-methyl-L-lanthionine sulfoxide","type":"exact"},{"name":"CROSSLNK Beta-methyllanthionine sulfoxide (Thr-Cys)","type":"exact"},{"name":"S-oxy-3-methyllanthionine","type":"exact"}],"termid":"MOD:00335"}


id: MONDO:0016581
data:
  {"annotated_genes":["SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87179],"is_not":false,"summary":null,"term":"MONDO:0016581"},{"annotations":[88436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008542"}]},"cv_name":"mondo","definition":"Conotruncal heart malformations are a group of congenital cardiac outflow tract anomalies that include such defects as tetralogy of Fallot, pulmonary atresia with ventricular septal defect, double-outlet right ventricle (DORV), double-outlet left ventricle, truncus arteriosus and transposition of the great arteries (TGA), among others. This group of defects is frequently found in patients with 22q11.2 deletion syndrome. A deletion of chromosome 22q11.2 has equally been associated in a subset of patients with various types of isolated non-syndromic conotruncal heart malformations (with the exception of DORV and TGA where this is very uncommon).","definition_xrefs":["Orphanet:2445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02730":null},"genotype_count":0,"is_obsolete":false,"name":"conotruncal heart malformations","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8189","SCTID:218728005","UMLS:C1857586","MEDGEN:341803","NANDO:2200275","ICD9:747.11","OMIM:217095"],"synonyms":[{"name":"CTHM","type":"related"},{"name":"Double-outlet right ventricle","type":"related"},{"name":"Taussig-Bing syndrome or defect","type":"exact"},{"name":"conotruncal anomaly face syndrome","type":"related"},{"name":"conotruncal cardiac defects","type":"related"},{"name":"conotruncal heart malformations","type":"exact"},{"name":"conotruncal heart malformations, variable","type":"exact"},{"name":"interrupted aortic Arch","type":"related"},{"name":"persistent truncus arteriosus","type":"related"},{"name":"truncus arteriosus communis","type":"related"}],"termid":"MONDO:0016581","terms_by_termid":{"MONDO:0008542":null,"MONDO:0016581":null},"xrefs":{"Monarch":{"xref_id":"0016581"}}}


id: GO:0103059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol oxoanion + UDP-L-rhamnose = H+ + kaempferol-3-rhamnoside + UDP(3-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-L-rhamnose:kaempferol 3-O-rhamnosyltransferase activity (obsolete GO:0103059)","termid":"GO:0103059"}


id: GO:0002622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"regulates","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell antigen processing and presentation","synonyms":[{"name":"regulation of B lymphocyte antigen processing and presentation","type":"exact"},{"name":"regulation of B-cell antigen processing and presentation","type":"exact"},{"name":"regulation of B-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002622"}


id: PBO:0056615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYST/Esa1-associated factor 6 pseudogene 1","termid":"PBO:0056615"}


id: PBO:0113748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHC pseudogene 4","termid":"PBO:0113748"}


id: GO:1903298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hypoxia-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058","PMID:24553947","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to hypoxia","termid":"GO:1900038"},{"relation_name":"is_a","term_name":"regulation of hypoxia-induced intrinsic apoptotic signaling pathway","termid":"GO:1903297"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to hypoxia","type":"narrow"},{"name":"negative regulation of hypoxia-induced apoptosis","type":"related"},{"name":"negative regulation of hypoxic stress-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"protection against hypoxia-induced apoptosis","type":"related"}],"termid":"GO:1903298"}


id: MONDO:0700031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 18 in which the presence of an extra copy of chromosome 18 is present only in some of the cells of the organism.","definition_xrefs":["PMID:27087248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisomy 18","termid":"MONDO:0018071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 18","termid":"MONDO:0700031","xrefs":{"Monarch":{"xref_id":"0700031"}}}


id: GO:0005461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucuronic acid from one side of a membrane to the other. UDP-glucuronic acid is a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"UDP-glucuronate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-9912889","Reactome:R-HSA-174368","Reactome:R-HSA-5603297"],"synonyms":[{"name":"UDP-glucuronic acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0005461"}


id: FYPO:0006414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is higher than normal (i.e. lower than observed in wild-type cells) during interphase of the mitotic cell cycle. Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PMID:17452352","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of histone gene mRNA during vegetative growth","termid":"FYPO:0006413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased level of histone gene mRNA during mitotic interphase","synonyms":[{"name":"increased histone gene mRNA accumulation during mitotic interphase","type":"related"},{"name":"increased level of histone gene RNA during mitotic interphase","type":"exact"},{"name":"increased level of histone gene mRNA during interphase of mitotic cell cycle","type":"exact"},{"name":"increased level of histone gene transcripts during mitotic interphase","type":"exact"}],"termid":"FYPO:0006414"}


id: FYPO:0001854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to iron ions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription during cellular response to iron","synonyms":[{"name":"increased transcription during cellular response to iron during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to iron during vegetative growth","type":"exact"},{"name":"increased transcription during cellular response to iron ion","type":"exact"},{"name":"increased transcription during cellular response to iron ions","type":"exact"}],"termid":"FYPO:0001854"}


id: GO:0102875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-18:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-18:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-18:2-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102875)","termid":"GO:0102875"}


id: GO:0009258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"10-formyltetrahydrofolate metabolic process","termid":"GO:0009256"},{"relation_name":"is_a","term_name":"folic acid-containing compound catabolic process","termid":"GO:0009397"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"10-formyltetrahydrofolate catabolic process","synonyms":[{"name":"10-formyl-THF catabolic process","type":"exact"},{"name":"10-formyl-THF catabolism","type":"exact"},{"name":"10-formyltetrahydrofolate breakdown","type":"exact"},{"name":"10-formyltetrahydrofolate catabolism","type":"exact"},{"name":"10-formyltetrahydrofolate degradation","type":"exact"}],"termid":"GO:0009258"}


id: GO:0043520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"regulates","term_name":"myosin II filament assembly","termid":"GO:0031036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0065003","GO:0044085","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"regulation of myosin II filament assembly","termid":"GO:0043520"}


id: PBO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase zeta catalytic subunit Rev3 (predicted)","termid":"PBO:0001900"}


id: MOD:01299
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-histidine residue with 4-hydroxynonenal artificially reduced by a reagent such as NaBH4.","definition_xrefs":["PubMed:15133838","PubMed:12148805","Unimod:335#K","PubMed:11910026"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"lysine 4-hydroxynonenal adduct","termid":"MOD:01238"},{"relation_name":"is_a","term_name":"reduced 4-hydroxynonenal adduct","termid":"MOD:00642"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"reduced lysine 4-hydroxynonenal adduct","synonyms":[{"name":"HNE+Delta:H(2)","type":"related"},{"name":"reduced 4-Hydroxynonenal","type":"related"}],"termid":"MOD:01299"}


id: GO:0005695
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. One of the two daughter strands of a duplicated chromosome that become apparent between early prophase and metaphase in mitosis and between diplotene and second metaphase in meiosis.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatid (obsolete GO:0005695)","synonyms":[{"name":"chromatid","type":"exact"}],"termid":"GO:0005695"}


id: GO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus that occurs in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in cell wall organization or biogenesis (obsolete GO:0000201)","synonyms":[{"name":"MAPK import into nucleus involved in cell wall biogenesis","type":"narrow"},{"name":"MAPK import into nucleus involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, MAPK import into nucleus","type":"exact"},{"name":"cell wall biogenesis, nuclear translocation of MAPK","type":"narrow"},{"name":"nuclear translocation of MAPK involved in cell wall biogenesis","type":"narrow"},{"name":"nuclear translocation of MAPK involved in cell wall integrity","type":"narrow"}],"termid":"GO:0000201"}


id: MONDO:0054804
data:
  {"annotated_genes":["SJAG_03161"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87850],"is_not":false,"summary":null,"term":"MONDO:0054804"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 21, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16278","MEDGEN:1646916","OMIM:617983","UMLS:C4693831"],"synonyms":[{"name":"MCPH21","type":"related"},{"name":"microcephaly 21, PRIMARY, autosomal recessive","type":"related"}],"termid":"MONDO:0054804","terms_by_termid":{"MONDO:0054804":null},"xrefs":{"Monarch":{"xref_id":"0054804"}}}


id: GO:0035403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-threonine (position 6) + ATP = histone H3-phosphothreonine (position 6) + ADP. This reaction is the addition of a phosphate group to the threonine residue at position 6 of histone H3.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0140096","GO:0004672","GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"histone H3T6 kinase activity","synonyms":[{"name":"histone H3-T6 kinase activity","type":"exact"},{"name":"histone kinase activity (H3-T6 specific)","type":"exact"},{"name":"histone threonine kinase activity (H3-T6 specific)","type":"exact"},{"name":"histone-threonine kinase activity (H3-T6 specific)","type":"exact"}],"termid":"GO:0035403"}


id: PBO:0049593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 11","termid":"PBO:0049593"}


id: PBO:0053846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1115","termid":"PBO:0053846"}


id: RO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of negatively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"RO:0002334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulated_by","termid":"RO:0002335"}


id: GO:0046111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase biosynthetic process","termid":"GO:0009113"},{"relation_name":"is_a","term_name":"xanthine metabolic process","termid":"GO:0046110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"xanthine biosynthetic process","synonyms":[{"name":"xanthine anabolism","type":"exact"},{"name":"xanthine biosynthesis","type":"exact"},{"name":"xanthine formation","type":"exact"},{"name":"xanthine synthesis","type":"exact"}],"termid":"GO:0046111"}


id: PBO:0067302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 387, pseudogene","termid":"PBO:0067302"}


id: PBO:0066049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1 GTPase activating protein 2","termid":"PBO:0066049"}


id: PR:O14129
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad55 gene.","definition_xrefs":["UniProtKB:O14129","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp55 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.03c","synonyms":[{"name":"RAD55 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad55","type":"exact"}],"termid":"PR:O14129"}


id: GO:0070083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-sculpted monoamine transport vesicle.","definition_xrefs":["GOC:mg2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"part_of","term_name":"clathrin-sculpted monoamine transport vesicle","termid":"GO:0070081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted monoamine transport vesicle membrane","synonyms":[{"name":"clathrin sculpted monoamine constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"clathrin sculpted monoamine transport vesicle membrane","type":"exact"}],"termid":"GO:0070083"}


id: PBO:0087425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit a of the vacuolar-ATPase V0 domain; encodes one of two isoforms, located in both Golgi and endosomal V-ATPase complexes while VPH1 encodes the second isoform and is located in vacuolar V-ATPase complexes; interaction with PI(4)P is required for efficient localization and function of Stv1-containing V-ATPases","termid":"PBO:0087425"}


id: PR:000050514
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the alp7 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule protein alp7 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC890.02c","synonyms":[{"name":"SPAC890.02c","type":"related"},{"name":"Spom-alp7","type":"exact"},{"name":"TACC protein mia1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"alp7","type":"related"},{"name":"altered polarity protein 7 (Schizosaccharomyces pombe)","type":"exact"},{"name":"mia1","type":"related"},{"name":"transforming acidic coiled-coil protein mia1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050514"}


id: MONDO:1010725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"C8 deficiency that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"c8 deficiency, non-human animal","termid":"MONDO:1010115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"c8 deficiency, rabbit","secondary_identifiers":["OMIA:000156-9986"],"termid":"MONDO:1010725","xrefs":{"Monarch":{"xref_id":"1010725"}}}


id: MOD:01310
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a lysine N6-hydrogen with a quaternary amine reagent light form group.","definition_xrefs":["PubMed:11857757","Unimod:60#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent light form N6-L-lysine","synonyms":[{"name":"GIST-Quat","type":"related"},{"name":"Quaternary amine labeling reagent light form (N-term & K)","type":"related"}],"termid":"MOD:01310"}


id: MONDO:0003542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental pulp calcification","secondary_identifiers":["MEDGEN:41471","UMLS:C0011401","ICD10CM:K04.2","DOID:5608","icd11.foundation:1672640309","MESH:D003784","SCTID:57602001"],"synonyms":[{"name":"pulp calcification","type":"exact"},{"name":"pulp calcifications","type":"exact"},{"name":"pulpal calcifications","type":"exact"}],"termid":"MONDO:0003542","xrefs":{"Monarch":{"xref_id":"0003542"}}}


id: GO:1990833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the removal of clathrin from vesicle membranes, coupled to the hydrolysis of ATP.","definition_xrefs":["PMID:8363588","PMID:6146630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"clathrin-uncoating ATPase activity","termid":"GO:1990833"}


id: PBO:0053970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1281","termid":"PBO:0053970"}


id: PBO:0065021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3","termid":"PBO:0065021"}


id: GO:0030289
data:
  {"annotated_genes":["SJAG_00369","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74403,109357],"is_not":false,"summary":null,"term":"GO:0030289"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex formed by the catalytic subunit of protein phosphatase 4 plus one or more regulatory subunits.","definition_xrefs":["GOC:bhm","PMID:10026142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein phosphatase 4 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030289","terms_by_termid":{"GO:0030289":null}}


id: FYPO:0004204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature snRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered snRNA or precursor level","termid":"FYPO:0005997"},{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased mature snRNA level","synonyms":[{"name":"decreased mature small nuclear RNA level","type":"exact"},{"name":"decreased mature snRNA accumulation","type":"related"},{"name":"decreased mature snRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature snRNA level during vegetative growth","type":"exact"},{"name":"decreased mature snRNA transcript level","type":"broad"},{"name":"decreased snRNA level","type":"broad"},{"name":"reduced mature snRNA level","type":"exact"}],"termid":"FYPO:0004204"}


id: GO:0140888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by type II interferon binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Type II interferon is also known as interferon-gamma.","definition_xrefs":["PMID:32464097","GOC:dph","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interferon-mediated signaling pathway","synonyms":[{"name":"interferon signaling pathway","type":"exact"},{"name":"interferon-activated signaling pathway","type":"exact"}],"termid":"GO:0140888"}


id: GO:0001870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement activation by the lectin pathway.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation, lectin pathway","termid":"GO:0001868"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"positive regulation of complement activation","termid":"GO:0045917"},{"relation_name":"positively_regulates","term_name":"complement activation, lectin pathway","termid":"GO:0001867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement activation, lectin pathway","synonyms":[{"name":"activation of complement activation, lectin pathway","type":"narrow"},{"name":"positive regulation of complement cascade, lectin pathway","type":"exact"},{"name":"stimulation of complement activation, lectin pathway","type":"narrow"},{"name":"up regulation of complement activation, lectin pathway","type":"exact"},{"name":"up-regulation of complement activation, lectin pathway","type":"exact"},{"name":"upregulation of complement activation, lectin pathway","type":"exact"}],"termid":"GO:0001870"}


id: GO:0035434
data:
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id: GO:0004635
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id: GO:0005920
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id: GO:0030614
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id: FYPO:0004057
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id: GO:2000757
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id: PR:000027503
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id: PBO:0073775
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC4A8 antisense RNA 1","termid":"PBO:0073775"}


id: GO:0062092
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id: PBO:0085796
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id: GO:0019923
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id: MONDO:1010945
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id: GO:0015055
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id: GO:0023051
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