# terms

id: GO:0071723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopeptide, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds and containing a nonprotein group consisting of a lipid or lipids.","definition_xrefs":["PMID:12524386","PMID:2757794","GOC:add","PMID:12077222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"lipopeptide binding","synonyms":[{"name":"bacterial lipopeptide binding","type":"narrow"},{"name":"bacterial lipoprotein binding","type":"related"}],"termid":"GO:0071723"}


id: PATO:0002393
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tolerance quality inhering in a bearer by virtue of the bearer's increased ability to endure a stimulus.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"tolerant to","termid":"PATO:0000515"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased tolerance to","termid":"PATO:0002393"}


id: MONDO:0016962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial duplication of the long arm of chromosome 11 (obsolete MONDO:0016962)","termid":"MONDO:0016962","xrefs":{"Monarch":{"xref_id":"0016962"}}}


id: PBO:0065618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 phosphatase activator","termid":"PBO:0065618"}


id: MONDO:0016131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinal muscular atrophy associated with central nervous system anomaly (obsolete MONDO:0016131)","secondary_identifiers":["Orphanet:207012"],"termid":"MONDO:0016131","xrefs":{"Monarch":{"xref_id":"0016131"}}}


id: PBO:0077498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 217","termid":"PBO:0077498"}


id: GO:1905365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intralumenal vesicle formation.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:TermGenie","PMID:26911690","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endosome organization","termid":"GO:1904978"},{"relation_name":"regulates","term_name":"intralumenal vesicle formation","termid":"GO:0070676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of intralumenal vesicle formation","synonyms":[{"name":"regulation of endosome membrane budding","type":"exact"}],"termid":"GO:1905365"}


id: MONDO:0043077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism","termid":"MONDO:0002146"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"weinstein kliman scully syndrome","secondary_identifiers":["MESH:C536688","MEDGEN:419765","GARD:392","UMLS:C2931289"],"synonyms":[{"name":"cardiomyopathy, hypogonadism and metabolic anomalies","type":"related"},{"name":"primary testicular insufficiency with normal virilization, blindness, deafness and metabolic abnormalities","type":"related"}],"termid":"MONDO:0043077","xrefs":{"Monarch":{"xref_id":"0043077"}}}


id: GO:0004682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: casein + ATP = phosphocasein + ADP.","definition_xrefs":["EC:2.7.11.1"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase CK2 activity (obsolete GO:0004682)","synonyms":[{"name":"casein kinase II activity","type":"related"},{"name":"casein kinase II, catalytic activity","type":"exact"},{"name":"protein kinase CK2 activity","type":"exact"},{"name":"protein kinase CK2, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0004682"}


id: GO:0002160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of a desmosome. A desmosome is a patch-like intercellular junctions found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an interspace of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desmosome organization","termid":"GO:0002934"},{"relation_name":"is_a","term_name":"cell-cell junction maintenance","termid":"GO:0045217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"desmosome maintenance","termid":"GO:0002160"}


id: GO:0047179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-radyl-2-acyl-sn-glycero-3-phospholipid + 1-alkyl-2-acetyl-sn-glycero-3-phosphocholine = 1-alkyl-2-lyso-sn-glycero-3-phosphocholine + 1-radyl-2-acetyl-sn-glycero-3-phospholipid.","definition_xrefs":["EC:2.3.1.149","MetaCyc:2.3.1.149-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"platelet-activating factor acetyltransferase activity","secondary_identifiers":["RHEA:11048"],"synonyms":[{"name":"1-alkyl-2-acyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phospholipid acetyltransferase activity","type":"related"},{"name":"PAF acetyltransferase activity","type":"exact"}],"termid":"GO:0047179"}


id: PBO:0085414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane sulfite pump involved in sulfite metabolism; required for efficient sulfite efflux; major facilitator superfamily protein","termid":"PBO:0085414"}


id: PBO:0063461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor C","termid":"PBO:0063461"}


id: PBO:0084835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein that may have a role in phospholipid metabolism; inner membrane protein with similarity to Mdm32p; required for normal mitochondrial morphology and inheritance; interacts genetically with MMM1, MMM2, MDM10, MDM12, and MDM34","termid":"PBO:0084835"}


id: PBO:0038735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 7B","termid":"PBO:0038735"}


id: PBO:0030136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_S_phase","termid":"PBO:0030136"}


id: PR:Q9UST1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk26 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UST1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAB-dependent poly(A)-specific ribonuclease subunit pan3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.14c","synonyms":[{"name":"PAB1P-dependent poly(A)-nuclease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAN deadenylation complex subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ppk26","type":"exact"}],"termid":"PR:Q9UST1"}


id: FYPO:0008319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is normal (i.e. indistinguishable from wild type) when the cell is subject to sulfur starvation. Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal macroautophagy","termid":"FYPO:0000385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal macroautophagy during sulfur starvation","termid":"FYPO:0008319"}


id: PBO:0090813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase [glutamine-hydrolyzing] Gua2","termid":"PBO:0090813"}


id: PBO:0061966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AF member 1 pseudogene","termid":"PBO:0061966"}


id: GO:0004245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage at the amino group of hydrophobic residues in insulin, casein, hemoglobin, and a number of other proteins and polypeptides.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete neprilysin activity (obsolete GO:0004245)","synonyms":[{"name":"CALLA","type":"related"},{"name":"CALLA (common acute lymphoblastic leukemia-associated) antigens","type":"related"},{"name":"CALLA antigen","type":"related"},{"name":"CALLA glycoprotein","type":"related"},{"name":"CALLA glycoproteins","type":"related"},{"name":"CD10","type":"related"},{"name":"acute lymphoblastic leukemia antigen","type":"related"},{"name":"common acute lymphoblastic leukemia antigen","type":"related"},{"name":"common acute lymphoblastic leukemia-associated antigens","type":"related"},{"name":"endopeptidase 24.11","type":"related"},{"name":"endopeptidase-2 activity","type":"broad"},{"name":"enkephalinase activity","type":"related"},{"name":"kidney-brush-border neutral endopeptidase","type":"narrow"},{"name":"kidney-brush-border neutral peptidase","type":"narrow"},{"name":"kidney-brush-border neutral proteinase activity","type":"narrow"},{"name":"membrane metalloendopeptidase activity","type":"narrow"},{"name":"neprilysin activity","type":"exact"},{"name":"neutral endopeptidase 24.11","type":"related"},{"name":"neutral endopeptidase activity","type":"related"},{"name":"neutral metallendopeptidase activity","type":"related"}],"termid":"GO:0004245"}


id: GO:0045712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salivary gland determination in a larval organism.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of salivary gland boundary specification","termid":"GO:0045706"},{"relation_name":"is_a","term_name":"regulation of larval salivary gland boundary specification","termid":"GO:0045708"},{"relation_name":"positively_regulates","term_name":"larval salivary gland boundary specification","termid":"GO:0007433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of larval salivary gland boundary specification","synonyms":[{"name":"activation of larval salivary gland determination","type":"narrow"},{"name":"positive regulation of larval salivary gland determination","type":"exact"},{"name":"stimulation of larval salivary gland determination","type":"narrow"},{"name":"up regulation of larval salivary gland determination","type":"exact"},{"name":"up-regulation of larval salivary gland determination","type":"exact"},{"name":"upregulation of larval salivary gland determination","type":"exact"}],"termid":"GO:0045712"}


id: PBO:0089576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in heterochromatin assembly Dri1","termid":"PBO:0089576"}


id: PBO:0078503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 regulated inhibitor of apoptosis 1 pseudogene 1","termid":"PBO:0078503"}


id: PBO:0046903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member B, pseudogene","termid":"PBO:0046903"}


id: MONDO:0024237
data:
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id: PBO:0004761
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id: FYPO:0007548
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear envelope organization is abnormal in the region of the nuclear envelope that surrounds the mitotic nuclear bridge during mitosis.","definition_xrefs":["PMID:32502403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic nuclear bridge midzone membrane domain organization","synonyms":[{"name":"abnormal MMD organization","type":"exact"},{"name":"abnormal mitotic nuclear bridge midzone envelope organization","type":"exact"},{"name":"abnormal mitotic nuclear bridge midzone membrane domain organization during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic nuclear bridge midzone membrane domain organization during vegetative growth","type":"exact"},{"name":"abnormal nuclear bridge midzone membrane domain organization","type":"exact"},{"name":"abnormal nuclear envelope organization at mitotic nuclear bridge midzone","type":"exact"}],"termid":"FYPO:0007548"}


id: PBO:0113402
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor; induces superficial pseudohyphal growth, positively regulates invasive growth, but is not required for invasive pseudohyphal growth; may act together with Phd1p; promotes cell adhesion independent of Flo11p by repressing genes that encode cell wall degrading enzymes; localizes to the nucleus; potential Cdc28p substrate","termid":"PBO:0113402"}


id: GO:0060979
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id: GO:0003421
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the columnar cartilage along the axis of a long bone that contributes to bone growth.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage axis specification","synonyms":[{"name":"growth plate cartilage axis determination","type":"related"}],"termid":"GO:0003421"}


id: GO:0030629
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id: PBO:0053786
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1037","termid":"PBO:0053786"}


id: GO:1901751
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene A4.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene A4 metabolic process","synonyms":[{"name":"leukotriene A4 metabolism","type":"exact"}],"termid":"GO:1901751"}


id: MONDO:0017418
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic intestinal failure (CIF) is a chronic type of intestinal failure characterized by a nonfunctioning small bowel (that may be reversible or irreversal) where the body is unable to maintain energy and nutritional needs through absorption of food or nutrients via the intestinal tract (despite being metabolically stable) and which therefore necessitates long-term parenteral feeding. CIF may be the result of congenital digestive diseases (such as gastroschisis, atresia of small intestine), short bowel syndrome, intra-abdominal or pelvic cancer, or progressive and devastating gastrointestinal or systemic benign diseases (such as Crohn disease).","definition_xrefs":["Orphanet:294422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic intestinal failure","secondary_identifiers":["GARD:21178","MEDGEN:909276","SCTID:716665002","UMLS:C4274352"],"synonyms":[{"name":"CIF","type":"exact"}],"termid":"MONDO:0017418","xrefs":{"Monarch":{"xref_id":"0017418"}}}


id: PBO:0052257
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte differentiation factor 1","termid":"PBO:0052257"}


id: GO:0009264
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id: GO:0035456
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id: GO:0000428
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protein complex that possesses DNA-directed RNA polymerase activity.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase 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RNA polymerase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000428","terms_by_termid":{"GO:0005658":null,"GO:0005665":null,"GO:0005666":null,"GO:0005669":null,"GO:0005672":null,"GO:0005673":null,"GO:0005674":null,"GO:0005675":null,"GO:0005736":null,"GO:0016593":null,"GO:0034245":null,"GO:0070985":null}}


id: MONDO:0017756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of pterin metabolism (obsolete MONDO:0017756)","secondary_identifiers":["icd11.foundation:1801446733","Orphanet:309819"],"termid":"MONDO:0017756","xrefs":{"Monarch":{"xref_id":"0017756"}}}


id: MONDO:0007083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant palmoplantar keratoderma with congenital alopecia (PPK-CA) is a rare genetic skin disorder characterized by absence of scalp and body hair and palmoplantar keratoderma, without other hand complications.","definition_xrefs":["Orphanet:1010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"autosomal dominant palmoplantar keratoderma and congenital alopecia","secondary_identifiers":["DOID:0111244","GARD:604","MEDGEN:930338","icd11.foundation:1745113656","SCTID:719518004","OMIM:104100","UMLS:C4304669"],"synonyms":[{"name":"PPK-CA, Stevanovic type","type":"exact"},{"name":"PPKCA1","type":"related"},{"name":"Ppkca, Stevanovic type","type":"related"},{"name":"alopecia congenita with hyperkeratosis of the palms and soles","type":"related"},{"name":"autosomal dominant palmoplantar hyperkeratosis and congenital alopecia","type":"exact"},{"name":"keratoderma-hypotrichosis-leukonychia totalis syndrome","type":"related"},{"name":"palmoplantar keratoderma and congenital alopecia 1","type":"related"},{"name":"palmoplantar keratoderma and congenital alopecia type 1","type":"exact"},{"name":"palmoplantar keratoderma and congenital alopecia, Stevanovic type","type":"exact"},{"name":"palmoplantar keratoderma with congenital alopecia","type":"exact"}],"termid":"MONDO:0007083","xrefs":{"Monarch":{"xref_id":"0007083"}}}


id: PR:Q9US08
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US08"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.10","synonyms":[{"name":"Spom972h-spo3","type":"exact"}],"termid":"PR:Q9US08"}


id: PBO:0050362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 65","termid":"PBO:0050362"}


id: PBO:0081236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 2","termid":"PBO:0081236"}


id: GO:0034594
data:
  {"annotated_genes":["SJAG_03131","SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016314"},{"annotations":[110265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylinositol trisphosphate + H2O = phosphatidylinositol bisphosphate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_03131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphatidylinositol trisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034594","terms_by_termid":{"GO:0016314":null,"GO:0034485":null}}


id: PBO:0029086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA_(guanine(9)-N(1))-methyltransferase_activity","termid":"PBO:0029086"}


id: PBO:0027966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_subtelomeric_heterochromatin","termid":"PBO:0027966"}


id: GO:0061725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipid droplets and hydrolysis of stored triglycerides occurring through the orchestrated activation of cytosolic lipases.","definition_xrefs":["GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cytosolic lipolysis","termid":"GO:0061725"}


id: GO:0072093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle formation","termid":"GO:0072033"},{"relation_name":"part_of","term_name":"metanephric renal vesicle morphogenesis","termid":"GO:0072283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle formation","synonyms":[{"name":"metanephros formation","type":"exact"}],"termid":"GO:0072093"}


id: PBO:0042142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 3 like 3","termid":"PBO:0042142"}


id: PBO:0031607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_M_phase_progression","termid":"PBO:0031607"}


id: MONDO:0007730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histiocytic dermatoarthritis","secondary_identifiers":["UMLS:C1840551","MESH:C564183","OMIM:142730","MEDGEN:327131"],"synonyms":[{"name":"histiocytic dermatoarthritis","type":"exact"}],"termid":"MONDO:0007730","xrefs":{"Monarch":{"xref_id":"0007730"}}}


id: MONDO:0018402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete female infertility due to gonadal dysgenesis (obsolete MONDO:0018402)","secondary_identifiers":["Orphanet:399877"],"synonyms":[{"name":"female infertility due to ovarian dysgenesis","type":"exact"},{"name":"rare female infertility due to gonadal dysgenesis","type":"related"},{"name":"rare female infertility due to ovarian dysgenesis","type":"exact"}],"termid":"MONDO:0018402","xrefs":{"Monarch":{"xref_id":"0018402"}}}


id: MONDO:0005042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the head.","definition_xrefs":["MONDO:patterns/location_top"],"gene_count":0,"genotype_count":0,"name":"obsolete head disorder (obsolete MONDO:0005042)","secondary_identifiers":["SCTID:118934005"],"synonyms":[{"name":"disease of head","type":"exact"},{"name":"disease or disorder of head","type":"exact"},{"name":"disorder of head","type":"exact"},{"name":"head disease","type":"exact"},{"name":"head disease or disorder","type":"exact"}],"termid":"MONDO:0005042","xrefs":{"Monarch":{"xref_id":"0005042"}}}


id: PBO:0081642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 568","termid":"PBO:0081642"}


id: GO:0051119
data:
  {"annotated_genes":["SJAG_00057","SJAG_02719","SJAG_03820","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055056"},{"annotations":[112624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005354"},{"annotations":[104907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015149"},{"annotations":[116175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[119223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a sugar from one side of a membrane to the other. A sugar is any member of a class of sweet, water-soluble, crystallizable carbohydrates, which are the monosaccharides and smaller oligosaccharides.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02719":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sugar transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-428779","Reactome:R-HSA-8876319","Reactome:R-HSA-8875902"],"synonyms":[{"name":"sugar/polyol channel activity","type":"narrow"}],"termid":"GO:0051119","terms_by_termid":{"GO:0005354":null,"GO:0005358":null,"GO:0015149":null,"GO:0055056":null,"GO:0140108":null}}


id: PBO:0064089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol transfer protein membrane associated 1","termid":"PBO:0064089"}


id: PBO:0072156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 33","termid":"PBO:0072156"}


id: GO:0043563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of odorants, any substance capable of stimulating the sense of smell, into, out of or within a cell, or between cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete odorant transporter activity (obsolete GO:0043563)","termid":"GO:0043563"}


id: MONDO:1012479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cervical vertebral compressive myelopathy, non-human animal","termid":"MONDO:1011891"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral compressive myelopathy, dog","secondary_identifiers":["OMIA:001894-9615"],"termid":"MONDO:1012479","xrefs":{"Monarch":{"xref_id":"1012479"}}}


id: PBO:0049157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 2B","termid":"PBO:0049157"}


id: MONDO:0001276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an impairment in the development of an individual's expressive language which is in contrast to his/her nonverbal intellect and receptive language development. The impairment may be acquired (i.e., due to a brain lesion or head trauma) or developmental (i.e., no known neurological insult).","definition_xrefs":["NCIT:C92562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"language disorder","termid":"MONDO:0004750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressive language disorder","secondary_identifiers":["UMLS:C0236826","ICD9:315.31","MEDGEN:452300","DOID:11385","ICD10CM:F80.1","SCTID:229733002"],"synonyms":[{"name":"developmental expressive language disorder","type":"exact"},{"name":"expressive language disorder","type":"exact"}],"termid":"MONDO:0001276","xrefs":{"Monarch":{"xref_id":"0001276"}}}


id: PBO:0061678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 93","termid":"PBO:0061678"}


id: GO:0061252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric glomerular epithelial cell. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell fate commitment","termid":"GO:0061252"}


id: MONDO:0004354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukemia that occurs during the neonatal period.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood leukemia","termid":"MONDO:0004355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"neonatal leukemia","secondary_identifiers":["DOID:7756","NCIT:C3845","MEDGEN:116003","UMLS:C0235813"],"synonyms":[{"name":"neonatal leukemia","type":"exact"}],"termid":"MONDO:0004354","xrefs":{"Monarch":{"xref_id":"0004354"}}}


id: MONDO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete split-hand/foot malformation with long bone deficiency (obsolete MONDO:0000174)","termid":"MONDO:0000174","xrefs":{"Monarch":{"xref_id":"0000174"}}}


id: GO:0019125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-phenylalanine.","definition_xrefs":["RESID:AA0194"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine racemization (obsolete GO:0019125)","termid":"GO:0019125"}


id: MONDO:0020816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria papulosa","secondary_identifiers":["MEDGEN:590456","SCTID:201192006","UMLS:C0406494"],"termid":"MONDO:0020816","xrefs":{"Monarch":{"xref_id":"0020816"}}}


id: FYPO:0002559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to actomyosin contractile ring","synonyms":[{"name":"normal protein localisation to actomyosin contractile ring","type":"exact"},{"name":"normal protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"normal protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"normal protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"normal protein localization to contractile ring","type":"exact"},{"name":"normal protein localization to cytokinetic contractile ring","type":"exact"},{"name":"normal protein localization to mitotic contractile ring","type":"exact"},{"name":"normal protein recruitment to actomyosin contractile ring","type":"related"}],"termid":"FYPO:0002559"}


id: GO:1990100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing homohexameric DNA helicase DnaB, and the DNA helicase loader DnaC. The helicase loader DnaC delivers DnaB to the chromosomal origin (oriC).","definition_xrefs":["GOC:bhm","PMID:20129058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"DnaB-DnaC complex","synonyms":[{"name":"DnaB6-DnaC3 complex","type":"narrow"},{"name":"DnaB6-DnaC6 complex","type":"narrow"},{"name":"helicase-loading complex","type":"broad"}],"termid":"GO:1990100"}


id: PBO:0017810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pig-U, Gab1 (predicted)","termid":"PBO:0017810"}


id: PR:O14367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gti1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconate transport inducer 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1751.01c","synonyms":[{"name":"Spom972h-gti1","type":"exact"}],"termid":"PR:O14367"}


id: PBO:0033808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_at_telomere_during_vegetative_growth","termid":"PBO:0033808"}


id: PBO:0060431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide associated complex subunit alpha 2","termid":"PBO:0060431"}


id: PBO:0081706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 626","termid":"PBO:0081706"}


id: PBO:0090063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf11","termid":"PBO:0090063"}


id: PBO:0108956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR77 pseudogene 1","termid":"PBO:0108956"}


id: PBO:0051902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGA9 antisense RNA 1","termid":"PBO:0051902"}


id: PBO:0087509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric nuclear SUMO activating enzyme E1 with Uba2p; activates Smt3p (SUMO) before its conjugation to proteins (sumoylation), which may play a role in protein targeting; essential for viability; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087509"}


id: GO:0048592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the eye are generated and organized.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"eye development","termid":"GO:0001654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye morphogenesis","secondary_identifiers":["GO:0048748"],"termid":"GO:0048592"}


id: GO:0030648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an aminoglycoside antibiotic, any member of a group of broad spectrum antibiotics, of similar toxicity and pharmacology, that contain an aminodeoxysugar, an amino- or guanidino-substituted inositol ring, and one or more residues of other sugars. The group includes streptomycin, neomycin, framycetin, kanamycin, paromomycin, and gentamicin.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycoside antibiotic biosynthetic process","synonyms":[{"name":"aminoglycoside antibiotic anabolism","type":"exact"},{"name":"aminoglycoside antibiotic biosynthesis","type":"exact"},{"name":"aminoglycoside antibiotic formation","type":"exact"},{"name":"aminoglycoside antibiotic synthesis","type":"exact"}],"termid":"GO:0030648"}


id: PR:P87178
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi3 gene.","definition_xrefs":["UniProtKB:P87178","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3D6.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.13c","synonyms":[{"name":"Spom972h-pdi3","type":"exact"}],"termid":"PR:P87178"}


id: GO:0051433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH2 protein domain, present in Bcl-2 family members. Proteins that act as inhibitors of apoptosis harbour at least three BH domains: BH1, BH2 and BH3; the BH1 and BH2 domains are found in all death antagonists of the Bcl-2 family but only in one class of death agonists.","definition_xrefs":["PMID:12133724","Prosite:PS01258","PMID:9704409","PMID:11048732","PMID:9020082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"BH2 domain binding","termid":"GO:0051433"}


id: PR:Q9Y7N0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bromodomain-containing protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1 complex bromodomain subunit bdf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.02","secondary_identifiers":["UniProtKB:Q9Y7N0"],"synonyms":[{"name":"Spom972h-BRD3","type":"exact"}],"termid":"PR:Q9Y7N0"}


id: GO:1901231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:1901231)","synonyms":[{"name":"activation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"narrow"},{"name":"activation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"narrow"},{"name":"positive regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"positive regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"positive regulation of non-canonical Wnt-activated signaling pathway via JNK cascade","type":"exact"},{"name":"up regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"up regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"up-regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"up-regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"upregulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"upregulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"}],"termid":"GO:1901231"}


id: PBO:0028396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_27S_rRNA_precursor_level","termid":"PBO:0028396"}


id: PBO:0077223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane BAX inhibitor motif containing 7, pseudogene","termid":"PBO:0077223"}


id: GO:0071836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a nectar by a cell or a tissue. Nectar is a fluid secreted by many angiosperms to promote pollination by providing a reward to pollinators. Nectar may also deter certain organisms from visiting or play other biological roles. Nectar is a complex solution that may include the following types of compounds: sugars, amino acids, organic acids, alkaloids, flavonoids, glycosides, vitamins, phenolics, metal ions, oils, free fatty acids, and proteins.","definition_xrefs":["PMID:19861655","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nectar secretion","synonyms":[{"name":"nectar production","type":"related"}],"termid":"GO:0071836"}


id: GO:0000177
data:
  {"annotated_genes":["SJAG_04084","SJAG_04006","SJAG_04824","SJAG_03179","SJAG_01818","SJAG_00854","SJAG_04818","SJAG_04153","SJAG_01521","SJAG_04321"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73082,73385,74215,74981,76100,76367,76853,78031,79475,117879],"is_not":false,"summary":null,"term":"GO:0000177"}]},"cv_name":"cellular_component","definition":"A ribonuclease complex that has 3-prime to 5-prime processive hydrolytic exoribonuclease activity producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured.","definition_xrefs":["PMID:17174896","PMID:20531386","PMID:26726035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exosome (RNase complex)","termid":"GO:0000178"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic exosome (RNase complex)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic exosome (ribonuclease complex)","type":"exact"},{"name":"cytoplasmic exosome multienzyme ribonuclease complex","type":"exact"},{"name":"prokaryotic exosome multienzyme ribonuclease complex","type":"exact"}],"termid":"GO:0000177","terms_by_termid":{"GO:0000177":null}}


id: PBO:0047621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fidgetin, microtubule severing factor","termid":"PBO:0047621"}


id: GO:0160004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ADP-ribosylation of the target protein.","definition_xrefs":["PMID:26673700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-D-ribose modification-dependent protein binding","termid":"GO:0160002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"poly-ADP-D-ribose modification-dependent protein binding","termid":"GO:0160004"}


id: PR:O94698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 74 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein nsa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.15","secondary_identifiers":["UniProtKB:O94698"],"synonyms":[{"name":"Spom972h-WDR74","type":"exact"}],"termid":"PR:O94698"}


id: GO:1901399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transforming growth factor beta3 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta3 activation (obsolete GO:1901399)","synonyms":[{"name":"down regulation of TGF-beta 3 activation","type":"exact"},{"name":"down regulation of TGFB3 activation","type":"exact"},{"name":"down regulation of TGFbeta 3 activation","type":"exact"},{"name":"down regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"down-regulation of TGF-beta 3 activation","type":"exact"},{"name":"down-regulation of TGFB3 activation","type":"exact"},{"name":"down-regulation of TGFbeta 3 activation","type":"exact"},{"name":"down-regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"downregulation of TGF-beta 3 activation","type":"exact"},{"name":"downregulation of TGFB3 activation","type":"exact"},{"name":"downregulation of TGFbeta 3 activation","type":"exact"},{"name":"downregulation of transforming growth factor beta3 activation","type":"exact"},{"name":"inhibition of TGF-beta 3 activation","type":"exact"},{"name":"inhibition of TGFB3 activation","type":"exact"},{"name":"inhibition of TGFbeta 3 activation","type":"exact"},{"name":"inhibition of transforming growth factor beta3 activation","type":"narrow"},{"name":"negative regulation of TGF-beta 3 activation","type":"exact"},{"name":"negative regulation of TGFB3 activation","type":"exact"},{"name":"negative regulation of TGFbeta 3 activation","type":"exact"}],"termid":"GO:1901399"}


id: GO:0034162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 9.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 9 signaling pathway","secondary_identifiers":["Reactome:R-HSA-168138"],"synonyms":[{"name":"TLR9 signaling pathway","type":"exact"},{"name":"toll-like receptor 9 signalling pathway","type":"exact"}],"termid":"GO:0034162"}


id: PBO:0086175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the negative regulation by ammonia of Gap1p; Gap1p is a general amino acid permease","termid":"PBO:0086175"}


id: FYPO:0002932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature snoRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered snoRNA or precursor level","termid":"FYPO:0005998"},{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased mature snoRNA level","synonyms":[{"name":"decreased mature small nucleolar RNA level","type":"exact"},{"name":"decreased mature snoRNA accumulation","type":"related"},{"name":"decreased mature snoRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature snoRNA level during vegetative growth","type":"exact"},{"name":"decreased mature snoRNA transcript level","type":"broad"},{"name":"decreased snoRNA level","type":"broad"},{"name":"reduced mature snoRNA level","type":"exact"}],"termid":"FYPO:0002932"}


id: PBO:0071776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 4","termid":"PBO:0071776"}


id: GO:0043816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(Cys) + O-phospho-L-serine + ATP = AMP + diphosphate + phosphoseryl-tRNA(Cys).","definition_xrefs":["RHEA:25678","PMID:17110438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0016874","GO:0003824","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"phosphoserine-tRNA(Cys) ligase activity","secondary_identifiers":["EC:6.1.1.27"],"synonyms":[{"name":"O-phosphoseryl-tRNA(Cys) synthetase activity","type":"exact"},{"name":"SepRS","type":"related"},{"name":"phosphoserine--tRNA(Cys) ligase activity","type":"exact"},{"name":"phosphoserine-tRNACys ligase activity","type":"exact"}],"termid":"GO:0043816"}


id: GO:0052775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R1-L-rhamnose-(1->3)-alpha-L-rhamnose-R2 + H2O = R1-L-rhamnose + L-rhamnose-R2. This reaction is the hydrolysis of an alpha-(1->3) linkage between two rhamnose residues in a polysaccharide chain.","definition_xrefs":["GOC:mengo_curators","PMID:10439404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"endo-1,3-alpha-L-rhamnosidase activity","synonyms":[{"name":"endo-(1,3)-alpha-L-rhamnosidase activity","type":"exact"},{"name":"endo-(1->3)-alpha-L-rhamnosidase activity","type":"exact"},{"name":"endorhamnosidase activity","type":"broad"}],"termid":"GO:0052775"}


id: GO:0035761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the dorsal motor nucleus of the vagus nerve to attain its fully functional state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve development","termid":"GO:0021744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve maturation","termid":"GO:0035761"}


id: GO:0039007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pronephric nephron are generated and organized. A pronephric nephron is the functional unit of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron morphogenesis","termid":"GO:0072028"},{"relation_name":"part_of","term_name":"pronephric nephron development","termid":"GO:0039019"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron morphogenesis","termid":"GO:0039007"}


id: PBO:0060936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 2","termid":"PBO:0060936"}


id: GO:0061819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of small fragments of circular extrachromosomal DNA elements which contain telomeric DNA. It is speculated that telomeric DNA-containing double minutes are formed through a recombination event between the telomere and chromosome-internal TTAGGG-like sequences. Telomeric DNA-containing double minutes appear as two closely positioned dots in metaphase.","definition_xrefs":["GOC:BHF_telomere","PMID:14690602","GOC:nc","PMID:2397458","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"telomeric DNA-containing double minutes formation","synonyms":[{"name":"TDMs formation","type":"exact"}],"termid":"GO:0061819"}


id: MONDO:0006511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete developmental dysplasia of the hip (obsolete MONDO:0006511)","termid":"MONDO:0006511","xrefs":{"Monarch":{"xref_id":"0006511"}}}


id: PBO:0060109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 10","termid":"PBO:0060109"}


id: GO:0042888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of molybdenum (Mo) ions from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"molybdenum ion transmembrane transporter activity","termid":"GO:0042888"}


id: PBO:0069404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 664, pseudogene","termid":"PBO:0069404"}


id: PBO:0088797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphospho-oligosaccharide-protein glycosyltransferase Ost1","termid":"PBO:0088797"}


id: PBO:0091780
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Counteractor of CENP-A loading Protein","termid":"PBO:0091780"}


id: PBO:0014605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smg1","termid":"PBO:0014605"}


id: PBO:0057087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 183","termid":"PBO:0057087"}


id: PBO:0089635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, iron ion Mrs3","termid":"PBO:0089635"}


id: GO:0016863
data:
  {"annotated_genes":["SJAG_04307","SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000247"},{"annotations":[76454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, one or more carbon-carbon double bonds in the molecule are rearranged, and no oxidized product appears.","definition_xrefs":["EC:5.3.3.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03598":null,"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, transposing C=C bonds","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"intramolecular isomerase activity, transposing C=C bonds","type":"exact"}],"termid":"GO:0016863","terms_by_termid":{"GO:0000247":null,"GO:0004452":null}}


id: GO:1904912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of RNA localization to telomere.","definition_xrefs":["PMID:26586433","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of establishment of RNA localization to telomere","termid":"GO:1904910"},{"relation_name":"positively_regulates","term_name":"establishment of RNA localization to telomere","termid":"GO:0097694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of RNA localization to telomere","synonyms":[{"name":"activation of establishment of RNA localisation to telomere","type":"narrow"},{"name":"activation of establishment of RNA localization to telomere","type":"narrow"},{"name":"positive regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"up-regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up-regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"upregulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"upregulation of establishment of RNA localization to telomere","type":"exact"}],"termid":"GO:1904912"}


id: GO:0008408
data:
  {"annotated_genes":["SJAG_02298","SJAG_04153","SJAG_04171","SJAG_04084","SJAG_00966","SJAG_00814","SJAG_04369","SJAG_05373","SJAG_06586","SJAG_01798","SJAG_01822","SJAG_02818","SJAG_05197","SJAG_03745","SJAG_03132","SJAG_04824","SJAG_01163","SJAG_02908","SJAG_00377","SJAG_02658","SJAG_04407","SJAG_00841","SJAG_01836","SJAG_03876","SJAG_00401","SJAG_04006","SJAG_02540","SJAG_02993","SJAG_04818","SJAG_00081","SJAG_04519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73776,76613,104750,106877],"is_not":false,"summary":null,"term":"GO:0008408"},{"annotations":[77313,76861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[104005,67854,76370,63756,100841,106339,72384,81265,81521,105593,107209,120340,71688,91824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[90386,74968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[116431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[80604,109739,76022,79252,118612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[70121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"},{"annotations":[90389,103057,75786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00377":null,"SJAG_00401":null,"SJAG_00814":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01163":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_02298":null,"SJAG_02540":null,"SJAG_02658":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04171":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04519":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05197":null,"SJAG_05373":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824","GO:0004527"],"is_obsolete":false,"name":"3'-5' exonuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3245943"],"synonyms":[{"name":"3'-5'-exonuclease activity","type":"exact"}],"termid":"GO:0008408","terms_by_termid":{"GO:0000175":null,"GO:0004535":null,"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0008408":null,"GO:0008859":null,"GO:1990838":null}}


id: MONDO:0012350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"atypical hemolytic-uremic syndrome","termid":"MONDO:0016244"},{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"},{"relation_name":"is_a","term_name":"non-immunoglobulin-mediated membranoproliferative glomerulonephritis","termid":"MONDO:0018013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"complement factor H deficiency","secondary_identifiers":["MEDGEN:96024","OMIM:609814","MESH:C562875","GARD:18551","SCTID:234622003","UMLS:C0398777","ICD9:279.8","NANDO:2200791"],"synonyms":[{"name":"CFHD","type":"related"},{"name":"Cfh deficiency","type":"related"},{"name":"complement factor H deficiency","type":"exact"},{"name":"factor H deficiency","type":"related"}],"termid":"MONDO:0012350","xrefs":{"Monarch":{"xref_id":"0012350"}}}


id: MONDO:0011488
data:
  {"annotated_genes":["SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87539],"is_not":false,"summary":null,"term":"MONDO:0011488"}]},"cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CDK5RAP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 3, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:347619","GARD:15373","MESH:C565746","OMIM:604804","UMLS:C1858108","DOID:0070286"],"synonyms":[{"name":"CDK5RAP2 autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH3","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CDK5RAP2","type":"exact"},{"name":"microcephaly 3, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0011488","terms_by_termid":{"MONDO:0011488":null},"xrefs":{"Monarch":{"xref_id":"0011488"}}}


id: GO:0002608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dendritic cell antigen processing and presentation","termid":"GO:0002605"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell antigen processing and presentation","termid":"GO:0002607"},{"relation_name":"negatively_regulates","term_name":"myeloid dendritic cell antigen processing and presentation","termid":"GO:0002469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid dendritic cell antigen processing and presentation","synonyms":[{"name":"down regulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"down-regulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"downregulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"inhibition of myeloid dendritic cell antigen processing and presentation","type":"narrow"}],"termid":"GO:0002608"}


id: GO:0035563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of chromatin binding. Chromatin binding is the selective interaction with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.","definition_xrefs":["GOC:bf","PMID:20404130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromatin binding","termid":"GO:0035563"}


id: PBO:0051673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 3","termid":"PBO:0051673"}


id: GO:0008174
data:
  {"annotated_genes":["SJAG_02099","SJAG_00325","SJAG_05693","SJAG_04034"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92305,95792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062152"},{"annotations":[74118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004482"},{"annotations":[111733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001734"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an mRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_02099":null,"SJAG_04034":null,"SJAG_05693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"mRNA methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008174","terms_by_termid":{"GO:0001734":null,"GO:0004482":null,"GO:0062152":null}}


id: PBO:0056204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A12","termid":"PBO:0056204"}


id: PBO:0005247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4-like TAF Taf6, SAGA complex subunit","termid":"PBO:0005247"}


id: GO:0033859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving furaldehyde, a furan ring-containing aldehyde compound which can be formed from the thermal decomposition of biomass.","definition_xrefs":["PMID:15338422","GOC:jp","PMID:16652391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"furaldehyde metabolic process","termid":"GO:0033859"}


id: PBO:0057417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548s","termid":"PBO:0057417"}


id: PBO:0055536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2972","termid":"PBO:0055536"}


id: PBO:0068376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 169","termid":"PBO:0068376"}


id: PBO:0034040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_positively_regulates","termid":"PBO:0034040"}


id: PBO:0001079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup184","termid":"PBO:0001079"}


id: PBO:0039977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 5A","termid":"PBO:0039977"}


id: PR:O59706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3A subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12786:SF2","PRO:DNx","OMA:SCHPO02615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.09","secondary_identifiers":["UniProtKB:O59706"],"synonyms":[{"name":"Spom972h-SF3A3","type":"exact"},{"name":"spliceosome-associated protein 61 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59706"}


id: PBO:0055635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3074","termid":"PBO:0055635"}


id: PBO:0062907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxytocin receptor","termid":"PBO:0062907"}


id: GO:0072363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glycolysis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glycolytic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0072363)","synonyms":[{"name":"regulation of glycolysis by positive regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072363"}


id: GO:0045865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of recombination within rDNA repeats (obsolete GO:0045865)","synonyms":[{"name":"regulation of recombination within rDNA repeats","type":"exact"}],"termid":"GO:0045865"}


id: GO:0030669
data:
  {"annotated_genes":["SJAG_02805","SJAG_00800","SJAG_01167","SJAG_00104"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80063,58571,76236,110292],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-coated endocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"clathrin-coated endocytic vesicle","termid":"GO:0045334"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"clathrin-coated endocytic vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030669","terms_by_termid":{"GO:0030122":null}}


id: GO:0047322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [3-hydroxy-3-methylglutaryl-CoA reductase (NADPH)] + ATP = [3-hydroxy-3-methylglutaryl-CoA reductase (NADPH)] phosphate + ADP.","definition_xrefs":["EC:2.7.11.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0140096","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity","secondary_identifiers":["MetaCyc:2.7.1.109-RXN"],"synonyms":[{"name":"3-hydroxy-3-methylglutaryl coenzyme A reductase kinase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA reductase kinase activity","type":"related"},{"name":"AMPK","type":"related"},{"name":"ATP:hydroxymethylglutaryl-CoA reductase (NADPH) phosphotransferase activity","type":"related"},{"name":"HMG-CoA reductase kinase activity","type":"related"},{"name":"STK29","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl-CoA reductase kinase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A reductase kinase (phosphorylating) activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A reductase kinase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH) kinase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH2) kinase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase kinase activity","type":"related"},{"name":"reductase kinase activity","type":"broad"}],"termid":"GO:0047322"}


id: PBO:0082734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; required for diauxic shift-induced histone H2B deposition onto rDNA genes; transcriptional modulator involved in regulation of structural phospholipid biosynthesis genes and metabolically unrelated genes, as well as maintenance of telomeres, mating efficiency, and sporulation","termid":"PBO:0082734"}


id: PBO:0082470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calmodulin-dependent protein kinase; may play a role in stress response, many Ca++/calmodulin dependent phosphorylation substrates demonstrated in vitro, amino acid sequence similar to mammalian Cam Kinase II; CMK1 has a paralog, CMK2, that arose from the whole genome duplication","termid":"PBO:0082470"}


id: PBO:0038758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 3","termid":"PBO:0038758"}


id: PR:000044699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht1/Me(K9)","termid":"PR:000027578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"Spom-hht1/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044699"}


id: MONDO:0012060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the ESRRB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 35","secondary_identifiers":["MEDGEN:324897","MESH:C563908","UMLS:C1837857","OMIM:608565","DOID:0110493","GARD:22609"],"synonyms":[{"name":"DFNB35","type":"narrow"},{"name":"ESRRB autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 35","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 35","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in ESRRB","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 35","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 35","type":"exact"},{"name":"deafness, autosomal recessive 35","type":"narrow"},{"name":"deafness, autosomal recessive type 35","type":"narrow"}],"termid":"MONDO:0012060","xrefs":{"Monarch":{"xref_id":"0012060"}}}


id: PBO:0056984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30c-2","termid":"PBO:0056984"}


id: PBO:0040558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GNTL1 pseudogene 1","termid":"PBO:0040558"}


id: GO:0019018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A segmented viral genome consisting of two sub-genomic nucleic acids but each nucleic acid is packaged into a different virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete bipartite viral genome (obsolete GO:0019018)","termid":"GO:0019018"}


id: GO:0017197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal proline of proteins to form the derivative N-acetyl-L-proline.","definition_xrefs":["RESID:AA0050"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-proline acetylation (obsolete GO:0017197)","termid":"GO:0017197"}


id: MONDO:0013614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertelorism-preauricular sinus-punctual pits-deafness syndrome","secondary_identifiers":["MEDGEN:1659106","OMIM:614187","Orphanet:293958","GARD:17351","UMLS:C4751125"],"synonyms":[{"name":"HPPD","type":"exact"},{"name":"hypertelorism, preauricular sinus, punctal pits, and deafness","type":"related"},{"name":"hypertelorism-preauricular sinus-punctual pits-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0013614","xrefs":{"Monarch":{"xref_id":"0013614"}}}


id: GO:0007559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The breakdown of tissues; usually, if not always, accompanied by cell death, followed by the complete dissolution of dead tissue.","definition_xrefs":["GOC:ma","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete histolysis (obsolete GO:0007559)","secondary_identifiers":["Wikipedia:Histolysis"],"termid":"GO:0007559"}


id: PBO:0054881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2295","termid":"PBO:0054881"}


id: PBO:0089081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein ortholog Tma22","termid":"PBO:0089081"}


id: PBO:0073783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC5A4 antisense RNA 1","termid":"PBO:0073783"}


id: PBO:0043958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma C","termid":"PBO:0043958"}


id: PBO:0073794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A1 antisense RNA 1","termid":"PBO:0073794"}


id: GO:0002808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antibacterial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"},{"relation_name":"regulates","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"}


id: PBO:0030918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cortex_morphology_during_vegetative_growth","termid":"PBO:0030918"}


id: PBO:0117133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPN9 antisense RNA 1","termid":"PBO:0117133"}


id: MONDO:0000518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chordoma (disease) that involves the fused sacrum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"},{"relation_name":"is_a","term_name":"spinal chordoma","termid":"MONDO:0002894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sacrum chordoma","secondary_identifiers":["SCTID:447730004","UMLS:C3164279","NCIT:C129927","MEDGEN:756688","DOID:0050900"],"synonyms":[{"name":"chordoma (disease) of fused sacrum","type":"exact"},{"name":"fused sacrum chordoma (disease)","type":"exact"}],"termid":"MONDO:0000518","xrefs":{"Monarch":{"xref_id":"0000518"}}}


id: FYPO:0001725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-aspartate measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular aspartate level","synonyms":[{"name":"normal cellular L-aspartate level","type":"exact"},{"name":"normal cellular aspartate level during mitotic cell cycle","type":"related"},{"name":"normal cellular aspartate level during vegetative growth","type":"exact"},{"name":"normal cellular aspartic acid level","type":"related"},{"name":"normal level of aspartate in cell","type":"exact"}],"termid":"FYPO:0001725"}


id: GO:1905547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","GOC:TermGenie","PMID:25819580","GOC:BHF","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of subtelomeric heterochromatin assembly (obsolete GO:1905547)","synonyms":[{"name":"regulation of telomeric heterochromatin assembly","type":"related"},{"name":"regulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905547"}


id: PBO:0058527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6072","termid":"PBO:0058527"}


id: PBO:0080428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 12","termid":"PBO:0080428"}


id: MONDO:0012128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dextro-looped transposition of the great arteries in which the cause of the disease is a mutation in the MED13L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dextro-looped transposition of the great arteries","termid":"MONDO:0019443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"transposition of the great arteries, dextro-looped","secondary_identifiers":["MESH:C563853","UMLS:C1837341","DOID:0060771","MEDGEN:332422","OMIM:608808"],"synonyms":[{"name":"D-TGA","type":"related"},{"name":"DTGA","type":"exact"},{"name":"DTGA1","type":"exact"},{"name":"MED13L dextro-looped transposition of the great arteries","type":"exact"},{"name":"dextro-looped transposition of the great arteries 1","type":"exact"},{"name":"dextro-looped transposition of the great arteries caused by mutation in MED13L","type":"exact"},{"name":"dextro-looped transposition of the great arteries type 1","type":"exact"},{"name":"transposition of the great arteries, dextro-looped 1","type":"related"},{"name":"transposition of the great arteries, dextro-looped type 1","type":"exact"}],"termid":"MONDO:0012128","xrefs":{"Monarch":{"xref_id":"0012128"}}}


id: GO:2001138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipid transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"regulates","term_name":"phospholipid transport","termid":"GO:0015914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of phospholipid transport","termid":"GO:2001138"}


id: PBO:0043917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal neoplasia differentially expressed","termid":"PBO:0043917"}


id: PBO:0003379
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.99.7","termid":"PBO:0003379"}


id: GO:0009251
data:
  {"annotated_genes":["SJAG_01171","SJAG_05001","SJAG_02076","SJAG_01561","SJAG_04963","SJAG_03646","SJAG_01888","SJAG_00115","SJAG_01783","SJAG_06309","SJAG_04327","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72245,72348,75040,76882,78852],"is_not":false,"summary":null,"term":"GO:0009251"},{"annotations":[105224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[73596,80659,75172,73858,74880,81678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucans, polysaccharides consisting only of glucose residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_01171":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_01888":null,"SJAG_02076":null,"SJAG_03646":null,"SJAG_03851":null,"SJAG_04327":null,"SJAG_04963":null,"SJAG_05001":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glucan catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glucan breakdown","type":"exact"},{"name":"glucan catabolism","type":"exact"},{"name":"glucan degradation","type":"exact"}],"termid":"GO:0009251","terms_by_termid":{"GO:0005980":null,"GO:0009251":null,"GO:0061723":null}}


id: MONDO:0032778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita 3, myogenic type","secondary_identifiers":["UMLS:C5193121","OMIM:618484","MEDGEN:1680655","DOID:0080979"],"synonyms":[{"name":"AMCM","type":"exact"},{"name":"arthrogryposis multiplex congenita, myogenic type","type":"exact"}],"termid":"MONDO:0032778","xrefs":{"Monarch":{"xref_id":"0032778"}}}


id: PR:Q9P7V4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein KTI12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12435:SF0","OMA:SCHPO01817","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kti12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.02c","secondary_identifiers":["UniProtKB:Q9P7V4"],"synonyms":[{"name":"Spom972h-KTI12","type":"exact"}],"termid":"PR:Q9P7V4"}


id: PR:O43022
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C354.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.08c","synonyms":[{"name":"Spom972h-rsn1","type":"exact"}],"termid":"PR:O43022"}


id: PBO:0038833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 6","termid":"PBO:0038833"}


id: PBO:0041949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby family member 1, beta catenin antagonist","termid":"PBO:0041949"}


id: MONDO:1012062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmolar nonketotic diabetes mellitus, non-human animal","termid":"MONDO:1011674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperosmolar nonketotic diabetes mellitus, domestic cat","secondary_identifiers":["OMIA:000280-9685"],"termid":"MONDO:1012062","xrefs":{"Monarch":{"xref_id":"1012062"}}}


id: PBO:0042922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic GMP-AMP synthase","termid":"PBO:0042922"}


id: PR:Q09906
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane protein 184B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 184 homolog C30D11.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.06c","secondary_identifiers":["UniProtKB:Q09906"],"synonyms":[{"name":"Spom972h-TMEM184B","type":"exact"}],"termid":"PR:Q09906"}


id: GO:0098727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which the numbers of cells of a particular type or in a tissue are maintained.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of cell number","termid":"GO:0098727"}


id: PBO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotically Upregulated Gene","termid":"PBO:0000310"}


id: PBO:0069983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1278, pseudogene","termid":"PBO:0069983"}


id: GO:0004129
data:
  {"annotated_genes":["SJAG_MIT13","SJAG_MIT04","SJAG_03337","SJAG_01355","SJAG_MIT20","SJAG_01077","SJAG_00976","SJAG_05629","SJAG_07007","SJAG_01190","SJAG_02504"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75693,90032,91067,93811,110246,116227,117462,118826,121064,121086,121115],"is_not":false,"summary":null,"term":"GO:0004129"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O.","definition_xrefs":["RHEA:11436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_02504":null,"SJAG_03337":null,"SJAG_05629":null,"SJAG_07007":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cytochrome-c oxidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CYTOCHROME-C-OXIDASE-RXN","Reactome:R-HSA-163214","EC:7.1.1.9"],"synonyms":[{"name":"Warburg's respiratory enzyme activity","type":"related"},{"name":"aa3-type cytochrome c oxidase","type":"narrow"},{"name":"ba3-type cytochrome c oxidase","type":"narrow"},{"name":"caa3-type cytochrome c oxidase","type":"narrow"},{"name":"cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"cytochrome a3 activity","type":"narrow"},{"name":"cytochrome aa3 activity","type":"narrow"},{"name":"cytochrome c oxidase activity","type":"exact"},{"name":"cytochrome oxidase activity","type":"related"},{"name":"indophenol oxidase","type":"narrow"},{"name":"indophenolase","type":"narrow"}],"termid":"GO:0004129","terms_by_termid":{"GO:0004129":null}}


id: GO:0048859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the limits of an anatomical structure are generated. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of anatomical boundary","termid":"GO:0048859"}


id: MONDO:1011152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anodontia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anodontia, non-human animal","termid":"MONDO:1010293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anodontia, domestic cat","secondary_identifiers":["OMIA:000048-9685"],"termid":"MONDO:1011152","xrefs":{"Monarch":{"xref_id":"1011152"}}}


id: PBO:0077994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing 2B","termid":"PBO:0077994"}


id: PBO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Ste11","termid":"PBO:0002559"}


id: MONDO:0016275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenocarcinoma of cervix uteri (obsolete MONDO:0016275)","termid":"MONDO:0016275","xrefs":{"Monarch":{"xref_id":"0016275"}}}


id: PBO:0112514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, possibly DNA J domain, implicated in protein folding, Hua1","termid":"PBO:0112514"}


id: PBO:0048820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5 pseudogene 4","termid":"PBO:0048820"}


id: GO:1905543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-15 (IL-15) and that consists of, at a minimum, an interleukin, an alpha, beta and gamma chain as well as optional additional kinase subunits. The alpha chain is unique to binds IL-15 while it shares the beta chain with the IL-2 receptor and the cytokine receptor common gamma chain with multiple interleukin receptors.","definition_xrefs":["GOC:bhm","PMID:23104097","GOC:TermGenie","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-15 receptor complex","synonyms":[{"name":"IL-15 receptor complex","type":"exact"},{"name":"IL-15-receptor complex","type":"exact"},{"name":"IL15 receptor complex","type":"exact"},{"name":"IL15-receptor complex","type":"exact"},{"name":"interleukin-15-receptor complex","type":"exact"}],"termid":"GO:1905543"}


id: PBO:0086687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0086687"}


id: PR:Q9UT72
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rfp2 gene.","definition_xrefs":["UniProtKB:Q9UT72","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase complex slx8-rfp subunit rfp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.18","synonyms":[{"name":"RING finger protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rfp2","type":"exact"}],"termid":"PR:Q9UT72"}


id: GO:2000922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of arabinoxylan-containing compound catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000921"},{"relation_name":"is_a","term_name":"negative regulation of xylan catabolic process","termid":"GO:2001001"},{"relation_name":"negatively_regulates","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of arabinoxylan-containing compound catabolic process","synonyms":[{"name":"negative regulation of arabinoxylan catabolism","type":"exact"}],"termid":"GO:2000922"}


id: GO:0030696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a methyl group from a donor to the C5 atom of the uridine residue at position 54 in a tRNA molecule.","definition_xrefs":["ISBN:1555811337"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (m5U54) methyltransferase activity (obsolete GO:0030696)","synonyms":[{"name":"RUMT","type":"exact"}],"termid":"GO:0030696"}


id: GO:0071867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monoamine stimulus. A monoamine is any of a group of molecular messengers that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to monoamine","synonyms":[{"name":"response to monoamine stimulus","type":"exact"}],"termid":"GO:0071867"}


id: MONDO:0001955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dysentery that involves protozoan infection.","definition_xrefs":["DOID:14397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysentery","termid":"MONDO:0001517"},{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"protozoal dysentery","secondary_identifiers":["MEDGEN:1843396","ICD9:007.8","UMLS:C2142761"],"termid":"MONDO:0001955","xrefs":{"Monarch":{"xref_id":"0001955"}}}


id: GO:1901186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"positively_regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ERBB signaling pathway","synonyms":[{"name":"activation of EGF receptor family signaling pathway","type":"exact"},{"name":"activation of EGFR family signaling pathway","type":"related"},{"name":"activation of ERBB signaling pathway","type":"narrow"},{"name":"activation of ERBB signalling pathway","type":"exact"},{"name":"activation of ErbB signaling","type":"exact"},{"name":"positive regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"positive regulation of EGFR family signaling pathway","type":"related"},{"name":"positive regulation of ERBB signalling pathway","type":"exact"},{"name":"positive regulation of ErbB signaling","type":"exact"},{"name":"up regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"up regulation of EGFR family signaling pathway","type":"related"},{"name":"up regulation of ERBB signaling pathway","type":"exact"},{"name":"up regulation of ERBB signalling pathway","type":"exact"},{"name":"up regulation of ErbB signaling","type":"exact"},{"name":"up-regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"up-regulation of EGFR family signaling pathway","type":"related"},{"name":"up-regulation of ERBB signaling pathway","type":"exact"},{"name":"up-regulation of ERBB signalling pathway","type":"exact"},{"name":"up-regulation of ErbB signaling","type":"exact"},{"name":"upregulation of EGF receptor family signaling pathway","type":"exact"},{"name":"upregulation of EGFR family signaling pathway","type":"related"},{"name":"upregulation of ERBB signaling pathway","type":"exact"},{"name":"upregulation of ERBB signalling pathway","type":"exact"},{"name":"upregulation of ErbB signaling","type":"exact"}],"termid":"GO:1901186"}


id: PBO:0041553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 25","termid":"PBO:0041553"}


id: MONDO:0043094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited ichthyosis","termid":"MONDO:0015947"},{"relation_name":"is_a","term_name":"ichthyosis","termid":"MONDO:0019269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis, follicular","secondary_identifiers":["SCTID:238627002","UMLS:C0406344","MEDGEN:98025","NANDO:1200628","GARD:2355"],"synonyms":[{"name":"follicular ichthyosis","type":"exact"}],"termid":"MONDO:0043094","xrefs":{"Monarch":{"xref_id":"0043094"}}}


id: GO:0034007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + H2O = (S)-linalool + diphosphate.","definition_xrefs":["RHEA:24116","EC:4.2.3.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"S-linalool synthase activity","secondary_identifiers":["KEGG_REACTION:R07631","MetaCyc:4.2.3.25-RXN"],"synonyms":[{"name":"3S-linalool synthase activity","type":"related"},{"name":"LIS","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [(3S)-linalool-forming] activity","type":"related"}],"termid":"GO:0034007"}


id: CHEBI:34656
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cumene","termid":"CHEBI:34656"}


id: MONDO:0017433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with combined reduction defects of upper and lower limbs (obsolete MONDO:0017433)","secondary_identifiers":["Orphanet:294957","icd11.foundation:1211657447"],"termid":"MONDO:0017433","xrefs":{"Monarch":{"xref_id":"0017433"}}}


id: GO:0005205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate/dermatan sulfate proteoglycan (obsolete GO:0005205)","synonyms":[{"name":"chondroitin sulfate/dermatan sulfate proteoglycan","type":"exact"},{"name":"chondroitin sulphate/dermatan sulphate proteoglycan","type":"exact"}],"termid":"GO:0005205"}


id: SO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deviation in chromosome structure or number.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"part_of","term_name":"chromosomally_aberrant_genome","termid":"SO:0001524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_variation","synonyms":[{"name":"chromosome variation","type":"exact"}],"termid":"SO:0000240"}


id: PR:Q09787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G6.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G6.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.09","synonyms":[{"name":"Spom972h-SPAC13G6.09","type":"exact"}],"termid":"PR:Q09787"}


id: GO:0047228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycerol + UDP-alpha-D-glucose = a 1,2-diacyl-3-O-(alpha-D-glucopyranosyl)-sn-glycerol + H+ + UDP.","definition_xrefs":["RHEA:47612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"1,2-diacylglycerol 3-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.157-RXN","EC:2.4.1.337"],"synonyms":[{"name":"UDP-glucose-diacylglycerol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,2-diacylglycerol 3-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,2-diacylglycerol glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,2-diacylglycerol 3-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:diacylglycerol glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-diacylglycerol glucosyltransferase activity","type":"related"}],"termid":"GO:0047228"}


id: MONDO:0002061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant papillary neoplasm that arises anywhere in the ductal system of the breast. It is characterized by fibrovascular structures lined by epithelial proliferations. This category includes intraductal papilloma and intraductal papillary carcinoma.","definition_xrefs":["NCIT:C36090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal breast neoplasm","termid":"MONDO:0002488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal papillary breast neoplasm","secondary_identifiers":["UMLS:C1334252","DOID:1628","MEDGEN:233572"],"synonyms":[{"name":"intraductal papillary breast neoplasm","type":"exact"}],"termid":"MONDO:0002061","xrefs":{"Monarch":{"xref_id":"0002061"}}}


id: PBO:0077171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 2 pseudogene 2","termid":"PBO:0077171"}


id: PBO:0088392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Rsv2","termid":"PBO:0088392"}


id: MOD:00442
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein L-arginine residue to protonated omega-N,omega-N'-dimethylated L-arginine with secondary loss of an N,N'-carbodiimide molecular fragment.","definition_xrefs":["PubMed:18688235","PubMed:15835918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated omega-N,omega-N'-dimethylated L-arginine with secondary neutral loss of N,N'-carbodiimide","synonyms":[{"name":"dCDI-NNMe2+Arg","type":"exact"}],"termid":"MOD:00442"}


id: GO:1901610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle transport along microtubule.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"positively_regulates","term_name":"vesicle transport along microtubule","termid":"GO:0047496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vesicle transport along microtubule","synonyms":[{"name":"activation of microtubule-based vesicle localization","type":"exact"},{"name":"activation of vesicle transport along microtubule","type":"narrow"},{"name":"positive regulation of microtubule-based vesicle localization","type":"exact"},{"name":"up regulation of microtubule-based vesicle localization","type":"exact"},{"name":"up regulation of vesicle transport along microtubule","type":"exact"},{"name":"up-regulation of microtubule-based vesicle localization","type":"exact"},{"name":"up-regulation of vesicle transport along microtubule","type":"exact"},{"name":"upregulation of microtubule-based vesicle localization","type":"exact"},{"name":"upregulation of vesicle transport along microtubule","type":"exact"}],"termid":"GO:1901610"}


id: PBO:0117005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL2RB and C1QTNF6 antisense RNA 1","termid":"PBO:0117005"}


id: PBO:0041685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calbindin 2","termid":"PBO:0041685"}


id: GO:0015337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Me2+(out) + H+(out) = Me2+(in) + H+(in). Me can be Mn2+ or Cu2+.","definition_xrefs":["TC:2.A.55.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete low affinity metal ion uptake transporter activity (obsolete GO:0015337)","synonyms":[{"name":"low affinity metal ion uptake transporter activity","type":"exact"}],"termid":"GO:0015337"}


id: PBO:0113155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone variant H2A.Z; exchanged for histone H2A in nucleosomes by the SWR1 complex; involved in transcriptional regulation through prevention of the spread of silent heterochromatin; Htz1p-containing nucleosomes facilitate RNA Pol II passage by affecting correct assembly and modification status of RNA Pol II elongation complexes and by favoring efficient nucleosome remodeling","termid":"PBO:0113155"}


id: PBO:0011096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxo-5-alpha-steroid 4-dehydrogenase (predicted)","termid":"PBO:0011096"}


id: GO:0003010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within voluntary skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the voluntary skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and it is under voluntary control. Voluntary skeletal muscle is skeletal muscle that is under conscious control.","definition_xrefs":["GOC:mtg_cardio","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle contraction","termid":"GO:0003009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}


id: GO:0052201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the defenses of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete response to symbiont defenses (obsolete GO:0052201)","termid":"GO:0052201"}


id: GO:0003931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. Any member of the Rho subfamily of the RAS superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton.","definition_xrefs":["EC:3.6.1.47","GOC:mah","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete Rho small monomeric GTPase activity (obsolete GO:0003931)","synonyms":[{"name":"Rho small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003931"}


id: FYPO:0002939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an RNA catabolic process that degrades mRNA encoded in the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0000956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear mRNA catabolic process","synonyms":[{"name":"normal nuclear mRNA breakdown","type":"exact"},{"name":"normal nuclear mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"normal nuclear mRNA catabolic process during vegetative growth","type":"exact"},{"name":"normal nuclear mRNA catabolism","type":"exact"},{"name":"normal nuclear mRNA degradation","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process","type":"exact"}],"termid":"FYPO:0002939"}


id: PBO:0029367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029367"}


id: GO:0070508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol into a cell or organelle.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cholesterol import","synonyms":[{"name":"cholesterol uptake","type":"exact"}],"termid":"GO:0070508"}


id: GO:0009581
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which an external stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of external stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of external stimulus","type":"related"}],"termid":"GO:0009581","terms_by_termid":{"GO:0050982":null}}


id: GO:0106411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5'XMP + H20 = phosphate + xanthosine.","definition_xrefs":["PMID:34824243"],"gene_count":0,"genotype_count":0,"name":"obsolete XMP 5'-nucleosidase activity (obsolete GO:0106411)","secondary_identifiers":["MetaCyc:XMPXAN-RXN"],"termid":"GO:0106411"}


id: MONDO:0019131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ossification anomalies-psychomotor developmental delay syndrome is characterized by hypomineralisation of the cranial bones, thoracic dystrophy, hypotonia, and abnormal and slender long bones due to an alteration in remodeling during ossification.","definition_xrefs":["Orphanet:73230"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with defective bone mineralization (obsolete MONDO:0019705)","termid":"MONDO:0019705"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ossification anomalies-psychomotor developmental delay syndrome","secondary_identifiers":["MEDGEN:928495","UMLS:C4302826","GARD:18921"],"termid":"MONDO:0019131","xrefs":{"Monarch":{"xref_id":"0019131"}}}


id: SO:0001521
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When translocation occurs between nonhomologous chromosomes and involved an equal exchange of genetic materials.","direct_ancestors":[{"relation_name":"is_a","term_name":"translocaton_attribute","termid":"SO:0001520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reciprocal","termid":"SO:0001521"}


id: MONDO:0005723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meningeal inflammation produced by cryptococcus neoformans, an encapsulated yeast that tends to infect individuals with acquired immunodeficiency syndrome and other immunocompromised states. The organism enters the body through the respiratory tract, but symptomatic infections are usually limited to the lungs and nervous system. The organism may also produce parenchymal brain lesions (torulomas). Clinically, the course is subacute and may feature headache; nausea; photophobia; focal neurologic deficits; seizures; cranial neuropathies; and hydrocephalus. (From Adams et al., Principles of Neurology, 6th ed, pp721-2)","definition_xrefs":["MESH:D016919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptococcosis","termid":"MONDO:0005724"},{"relation_name":"is_a","term_name":"fungal meningitis","termid":"MONDO:0006764"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cryptococcal meningitis","secondary_identifiers":["UMLS:C0085436","ICD9:321.0","SCTID:14232007","EFO:0007228","NCIT:C174113","DOID:0080159","MEDGEN:88410"],"synonyms":[{"name":"Cryptococcus neoformans caused infectious meningitis","type":"exact"},{"name":"Cryptococcus neoformans infectious meningitis","type":"exact"}],"termid":"MONDO:0005723","xrefs":{"Monarch":{"xref_id":"0005723"}}}


id: MONDO:0006623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune pancreatitis type 1 (obsolete MONDO:0006623)","termid":"MONDO:0006623","xrefs":{"Monarch":{"xref_id":"0006623"}}}


id: GO:0051049
data:
  {"annotated_genes":["SJAG_04920","SJAG_01311","SJAG_03453","SJAG_03581","SJAG_00296","SJAG_04509","SJAG_04469","SJAG_04343","SJAG_05346","SJAG_00991","SJAG_02419","SJAG_03631","SJAG_02605","SJAG_01245","SJAG_03763","SJAG_04052","SJAG_01373","SJAG_02592","SJAG_04990","SJAG_03268","SJAG_04597","SJAG_04666","SJAG_04312","SJAG_02684","SJAG_00661","SJAG_00514","SJAG_02366","SJAG_04551","SJAG_04464","SJAG_03048","SJAG_01166","SJAG_00402","SJAG_04465","SJAG_00845","SJAG_00649","SJAG_01805","SJAG_03591","SJAG_03970","SJAG_03987"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93070,115352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[96455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[89919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[89920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[107753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[89921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"},{"annotations":[104061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"},{"annotations":[105620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045807"},{"annotations":[102085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[91770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[95191,100774,112515,93601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[100775,93602,95192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[95193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[96281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[103768,102348,95671,112994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[96239,92697,104302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[120889,113003,113650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000369"},{"annotations":[89726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[104855,80217,94285,94572,79294,91716,92812,115355,115225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030100"},{"annotations":[78424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[61629,100289,89729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017157"},{"annotations":[93878,89730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"},{"annotations":[101292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"},{"annotations":[108341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902267"},{"annotations":[115614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000156"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"transport","termid":"GO:0006810"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00402":null,"SJAG_00514":null,"SJAG_00649":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_00991":null,"SJAG_01166":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_01805":null,"SJAG_02366":null,"SJAG_02419":null,"SJAG_02592":null,"SJAG_02605":null,"SJAG_02684":null,"SJAG_03048":null,"SJAG_03268":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_03591":null,"SJAG_03631":null,"SJAG_03763":null,"SJAG_03970":null,"SJAG_03987":null,"SJAG_04052":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04465":null,"SJAG_04469":null,"SJAG_04509":null,"SJAG_04551":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04920":null,"SJAG_04990":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0051049","terms_by_termid":{"GO:0017157":null,"GO:0030100":null,"GO:0033157":null,"GO:0035432":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0045806":null,"GO:0045807":null,"GO:0045921":null,"GO:0046827":null,"GO:0060628":null,"GO:1902267":null,"GO:1902854":null,"GO:1905530":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905665":null,"GO:1905949":null,"GO:2000156":null,"GO:2000185":null,"GO:2000369":null,"GO:2001135":null}}


id: PBO:0049012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol specific phospholipase D1","termid":"PBO:0049012"}


id: GO:0046504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycerol ether biosynthetic process","synonyms":[{"name":"glycerol ether anabolism","type":"exact"},{"name":"glycerol ether biosynthesis","type":"exact"},{"name":"glycerol ether formation","type":"exact"},{"name":"glycerol ether synthesis","type":"exact"}],"termid":"GO:0046504"}


id: SO:0000564
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one DJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_DJ_J_C_cluster","synonyms":[{"name":"V DJ J C cluster","type":"exact"},{"name":"V-(DJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000564"}


id: PBO:0048355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 66","termid":"PBO:0048355"}


id: PBO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"appears to be part of transcript of adjacent gene","termid":"PBO:0002159"}


id: FYPO:0006691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell proceeds through the mitotic metaphase/anaphase transition in the presence of an uncorrected problem (such as chromosome structure or kinetochore attachment), and as a result undergoes abnormal nuclear envelope partitioning and subsequently dies.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe with abnormal nuclear envelope partitioning (obsolete FYPO:0006691)","synonyms":[{"name":"cut-like","type":"related"},{"name":"mitotic catastrophe with abnormal nuclear envelope partitioning during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe with abnormal nuclear envelope partitioning during vegetative growth","type":"exact"}],"termid":"FYPO:0006691"}


id: GO:1901422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a butan-1-ol stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:24014527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to butan-1-ol","secondary_identifiers":["GO:1990336"],"synonyms":[{"name":"process resulting in tolerance to butan-1-ol","type":"narrow"}],"termid":"GO:1901422"}


id: PBO:0066230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM38 antisense RNA 1","termid":"PBO:0066230"}


id: MONDO:0006135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of cervical adenocarcinoma composed of clear and hobnail cells. It is associated with in utero exposure to diethylstilbestrol (DES).","definition_xrefs":["NCIT:C6344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical clear cell adenocarcinoma","secondary_identifiers":["DOID:5303","MEDGEN:234113","UMLS:C1332912","ONCOTREE:CECC","EFO:1000163"],"synonyms":[{"name":"cervical clear cell adenocarcinoma","type":"exact"},{"name":"cervical clear cell carcinoma","type":"exact"},{"name":"cervix clear cell adenocarcinoma","type":"exact"},{"name":"cervix clear cell carcinoma","type":"exact"},{"name":"cervix uteri clear cell adenocarcinoma","type":"exact"},{"name":"cervix uteri clear cell carcinoma","type":"exact"},{"name":"clear cell adenocarcinoma of cervix","type":"exact"},{"name":"clear cell adenocarcinoma of cervix uteri","type":"exact"},{"name":"clear cell adenocarcinoma of the cervix","type":"exact"},{"name":"clear cell adenocarcinoma of the cervix uteri","type":"exact"},{"name":"clear cell adenocarcinoma of the uterine cervix","type":"exact"},{"name":"clear cell adenocarcinoma of uterine cervix","type":"exact"},{"name":"clear cell carcinoma of cervix","type":"exact"},{"name":"clear cell carcinoma of cervix uteri","type":"exact"},{"name":"clear cell carcinoma of the cervix","type":"exact"},{"name":"clear cell carcinoma of the cervix uteri","type":"exact"},{"name":"clear cell carcinoma of the uterine cervix","type":"exact"},{"name":"clear cell carcinoma of uterine cervix","type":"exact"},{"name":"uterine cervix clear cell adenocarcinoma","type":"exact"},{"name":"uterine cervix clear cell carcinoma","type":"exact"}],"termid":"MONDO:0006135","xrefs":{"Monarch":{"xref_id":"0006135"}}}


id: GO:0102560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-phosphonato-alpha-D-ribose cyclic-1,2-phosphate + H2O = D-ribofuranose 2,5-bisphosphate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-phospho-alpha-D-ribose 1,2-cyclic phosphate 1-phosphohydrolase activity (obsolete GO:0102560)","synonyms":[{"name":"phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase","type":"exact"}],"termid":"GO:0102560"}


id: PBO:0051044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1-7","termid":"PBO:0051044"}


id: MONDO:0017205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary oculocerebral lymphoma is a rare, primary, organ-specific, extranodal non-Hodgkin's lymphoma (typically diffuse large B-cell lymphoma), simultaneously affecting the intraocular compartments (retina, vitreous, optic nerve, uvea and others) and the central nervous system (commonly the cerebellum, spinal cord or pia mater). The presenting symptoms vary depending on the localization of the tumor and may include vitreous floaters or blurred vision, raised intracranial pressure (headache, vomiting, papilledema) and/or focal neurological deficits.","definition_xrefs":["Orphanet:279897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye lymphoma","termid":"MONDO:0004034"},{"relation_name":"is_a","term_name":"primary organ-specific lymphoma","termid":"MONDO:0017207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"primary oculocerebral lymphoma","secondary_identifiers":["MEDGEN:1814439","UMLS:C5679779","icd11.foundation:446504143","GARD:21062"],"synonyms":[{"name":"primary oculocerebral non-Hodgkin lymphoma","type":"exact"}],"termid":"MONDO:0017205","xrefs":{"Monarch":{"xref_id":"0017205"}}}


id: GO:0070662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mast cell population by cell division.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell proliferation","termid":"GO:0070662"}


id: MONDO:0015727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 15 is a rare chromosomal anomaly syndrome principally characterized by intrauterine growth restriction, congenital cardiac anomalies (incl. ventricular and atrial septal defects, patent ductus arteriosus) and craniofacial dysmorphism (incl. hypertelorism, downslanting palpebral fissures, wide nasal bridge). Patients also present brain (e.g. hypoplastic cerebellum, ventricular asymmetry), renal (e.g. small dysplastic kidneys), and/or genital (undescended testis, small penis, hypoplastic labia majora) anomalies. Digital and skin pigmentation abnormalities have also been reported.","definition_xrefs":["Orphanet:1706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 15 disorder","termid":"MONDO:0700022"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 15","secondary_identifiers":["MESH:C538037","UMLS:C2931707","GARD:5313","SCTID:764619001","MEDGEN:419475"],"synonyms":[{"name":"Mosaic trisomy chromosome 15","type":"exact"},{"name":"Mosaic trisomy type 15","type":"exact"},{"name":"chromosome 15, trisomy mosaicism","type":"related"},{"name":"trisomy 15 mosaicism","type":"exact"}],"termid":"MONDO:0015727","xrefs":{"Monarch":{"xref_id":"0015727"}}}


id: PBO:0025471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-L ortholog Fta1","termid":"PBO:0025471"}


id: GO:0140069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butyryl-CoA + histone = CoA + butyryl-histone.","definition_xrefs":["PMID:27105113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide butyryltransferase activity","termid":"GO:0140065"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone butyryltransferase activity","termid":"GO:0140069"}


id: PBO:0027632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_subtelomere","termid":"PBO:0027632"}


id: MONDO:0016166
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[87503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"}]},"cv_name":"mondo","definition":"An instance of hyperparathyroidism that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperparathyroidism","termid":"MONDO:0001741"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary hyperparathyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:145000","GARD:20408","Orphanet:208596","UMLS:C5680826","MEDGEN:1843372"],"synonyms":[{"name":"genetic hyperparathyroidism","type":"exact"}],"termid":"MONDO:0016166","terms_by_termid":{"MONDO:0007767":null,"MONDO:0007768":null},"xrefs":{"Monarch":{"xref_id":"0016166"}}}


id: MOD:01097
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-benzyl-L-cysteine.","definition_xrefs":["DeltaMass:242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-benzyl-L-cysteine","termid":"MOD:01097"}


id: PBO:0039008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALF transcription elongation factor 3","termid":"PBO:0039008"}


id: PBO:0050794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 4","termid":"PBO:0050794"}


id: FYPO:0004203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of calcium ions into a cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal calcium import","termid":"FYPO:0001953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased calcium import","synonyms":[{"name":"increased calcium import during mitotic cell cycle","type":"related"},{"name":"increased calcium import during vegetative growth","type":"exact"},{"name":"increased calcium import into cell","type":"exact"},{"name":"increased calcium ion import","type":"exact"},{"name":"increased calcium ion import across plasma membrane","type":"exact"},{"name":"increased calcium uptake","type":"exact"},{"name":"increased calcium uptake into intracellular compartments","type":"related"},{"name":"increased cellular calcium import","type":"exact"}],"termid":"FYPO:0004203"}


id: GO:0033230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + L-cysteine(in) = ADP + H+ + L-cysteine(out) + phosphate.","definition_xrefs":["RHEA:29783","PMID:25837721","PMID:32144203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type amino acid transporter activity","termid":"GO:0015424"},{"relation_name":"is_a","term_name":"cysteine transmembrane transporter activity","termid":"GO:0033229"},{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type cysteine transporter activity","secondary_identifiers":["MetaCyc:RXN0-3","GO:0032519"],"synonyms":[{"name":"ATP-dependent cysteine transporter activity","type":"exact"},{"name":"ATPase-coupled cysteine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled cysteine transporter activity","type":"related"},{"name":"cysteine exporter","type":"related"},{"name":"cysteine-exporting ATPase activity","type":"related"},{"name":"cysteine-transporting ATPase activity","type":"exact"}],"termid":"GO:0033230"}


id: PBO:0113066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone acetyltransferase complex; associates with and protects nucleosome-free regions of the genome including rDNA, tDNA and telomeric loci, contributing to genome integrity","termid":"PBO:0113066"}


id: FYPO:0001125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal shape.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal vegetative cell shape","synonyms":[{"name":"normal cell shape during vegetative growth","type":"exact"},{"name":"normal vegetative cell shape during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001125"}


id: MONDO:0957318
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88329,88330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020722"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis","termid":"MONDO:0008171"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrolithiasis, calcium oxalate","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:167030","MEDGEN:318935","UMLS:C1833683"],"termid":"MONDO:0957318","terms_by_termid":{"MONDO:0020722":null},"xrefs":{"Monarch":{"xref_id":"0957318"}}}


id: PBO:0043953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta-gamma domain containing 1","termid":"PBO:0043953"}


id: GO:0050638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + taxa-4(20),11-dien-5alpha-ol = CoA + taxa-4(20),11-dien-5alpha-yl acetate.","definition_xrefs":["EC:2.3.1.162","RHEA:22028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"taxadien-5-alpha-ol O-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.162-RXN","KEGG_REACTION:R06307"],"synonyms":[{"name":"acetyl coenzyme A: taxa-4(20),11(12)-dien-5alpha-ol O-acetyl transferase activity","type":"related"},{"name":"acetyl coenzyme A:taxa-4(20),11(12)-dien-5-alpha-ol O-acetyl transferase activity","type":"related"},{"name":"acetyl-CoA:taxa-4(20),11-dien-5alpha-ol O-acetyltransferase activity","type":"related"},{"name":"taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase activity","type":"related"},{"name":"taxadien-5a-ol O-acetyltransferase activity","type":"exact"},{"name":"taxadien-5alpha-ol O-acetyltransferase activity","type":"related"},{"name":"taxadienol acetyltransferase activity","type":"related"}],"termid":"GO:0050638"}


id: GO:0097513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:mah","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament","termid":"GO:0032982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"myosin II filament","termid":"GO:0097513"}


id: PBO:0082492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic core subunit, Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; contains a RING-H2 domain that is required for activity","termid":"PBO:0082492"}


id: MONDO:0013783
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88511],"is_not":false,"summary":null,"term":"MONDO:0013783"}]},"cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the ABCB6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15811","OMIM:614497","MEDGEN:482657","UMLS:C3281027"],"synonyms":[{"name":"ABCB6 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"MCOPCB7","type":"related"},{"name":"microphthalmia, isolated, with coloboma 7","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in ABCB6","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 7","type":"exact"}],"termid":"MONDO:0013783","terms_by_termid":{"MONDO:0013783":null},"xrefs":{"Monarch":{"xref_id":"0013783"}}}


id: SO:0002358
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a vault RNA.","definition_xrefs":["PMID:30773316","PMID:19491402","PMID:22058117","PMID:22926522","PMID:19298825","PMID:9535882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault_RNA_gene","termid":"SO:0002358"}


id: FYECO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which TOP-53 (a drug that targets topoisomerase II) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ TOP-53","termid":"FYECO:0000313"}


id: PBO:0051063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 4-4","termid":"PBO:0051063"}


id: MONDO:0009757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type C Niemann-Pick disease associated with a mutation in the gene NPC1, encoding Niemann-Pick C1 protein.","definition_xrefs":["NCIT:C126864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Niemann-Pick disease type C","termid":"MONDO:0018982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005046","MONDO:0005066","MONDO:0006025","MONDO:0002525"],"is_obsolete":false,"name":"Niemann-Pick disease, type C1","secondary_identifiers":["UMLS:C3179455","DOID:0070113","SCTID:18927009","OMIM:257220","MEDGEN:465922","SCTID:67855008"],"synonyms":[{"name":"NPC1","type":"related"},{"name":"Niemann-PICK disease, type C1","type":"related"},{"name":"Niemann-Pick disease type C1","type":"related"},{"name":"Niemann-Pick disease with cholesterol esterification block","type":"related"},{"name":"Niemann-Pick disease without sphingomyelinase deficiency","type":"related"},{"name":"Niemann-Pick disease, chronic neuronopathic form","type":"related"},{"name":"Niemann-Pick disease, nova Scotian type","type":"related"},{"name":"Niemann-Pick disease, subacute juvenile form","type":"related"},{"name":"Niemann-Pick disease, type C","type":"related"},{"name":"Niemann-Pick disease, type C1","type":"exact"},{"name":"Niemann-Pick disease, type D","type":"related"},{"name":"neurovisceral storage disease with vertical supranuclear ophthalmoplegia","type":"related"},{"name":"type C1 Niemann-Pick disease","type":"exact"}],"termid":"MONDO:0009757","xrefs":{"Monarch":{"xref_id":"0009757"}}}


id: PBO:0089199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine deaminase Ccd1","termid":"PBO:0089199"}


id: PBO:0046266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 4","termid":"PBO:0046266"}


id: PBO:0085949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant displays reduced respiratory growth and elevated frequency of mitochondrial genome loss; the authentic, non-tagged protein is detected in purified mitochondria in high-throughput studies","termid":"PBO:0085949"}


id: MONDO:0033181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenytoin or carbamazepine toxicity","secondary_identifiers":["Orphanet:414750"],"termid":"MONDO:0033181","xrefs":{"Monarch":{"xref_id":"0033181"}}}


id: MONDO:0003044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A chondrosarcoma that is located in exclusively soft tissue.","definition_xrefs":["DOID:4549","PMID:16084955"],"gene_count":0,"genotype_count":0,"name":"obsolete extraosseous chondrosarcoma (obsolete MONDO:0003044)","termid":"MONDO:0003044","xrefs":{"Monarch":{"xref_id":"0003044"}}}


id: MONDO:0002712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon lipoma characterized by prominent vascularity that arises in the epidural space of the spinal canal.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord lipoma","termid":"MONDO:0001790"},{"relation_name":"is_a","term_name":"epidural spinal canal neoplasm","termid":"MONDO:0002713"},{"relation_name":"is_a","term_name":"angiolipoma","termid":"MONDO:0006085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidural spinal canal angiolipoma","secondary_identifiers":["MEDGEN:232461","DOID:3617","NCIT:C5424","UMLS:C1333416"],"synonyms":[{"name":"angiolipoma of epidural space","type":"exact"},{"name":"angiolipoma of epidural spinal canal","type":"exact"},{"name":"angiolipoma of extradural spinal canal","type":"exact"},{"name":"angiolipoma of the epidural spinal canal","type":"exact"},{"name":"angiolipoma of the extradural spinal canal","type":"exact"},{"name":"epidural space angiolipoma","type":"exact"},{"name":"extradural spinal canal angiolipoma","type":"exact"}],"termid":"MONDO:0002712","xrefs":{"Monarch":{"xref_id":"0002712"}}}


id: PBO:0068869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 109, pseudogene","termid":"PBO:0068869"}


id: PBO:0062793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orosomucoid 1","termid":"PBO:0062793"}


id: GO:0106212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which centromeres dissociate from the spindle pole body, contributing to the rearrangement of chromosomes into the orientation characteristic of meiotic prophase I.","definition_xrefs":["PMID:27611693","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"centromere detachment from spindle pole body involved in meiotic chromosome organization","synonyms":[{"name":"centromere detachment from SPB involved in meiotic chromosome organization","type":"exact"},{"name":"centromere detachment from spindle pole body involved in chromosome organization involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0106212"}


id: GO:2000977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of forebrain neuron differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"forebrain neuron differentiation","termid":"GO:0021879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of forebrain neuron differentiation","termid":"GO:2000977"}


id: MONDO:0014511
data:
  {"annotated_genes":["SJAG_03495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88551],"is_not":false,"summary":null,"term":"MONDO:0014511"}]},"cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease in which the cause of the disease is a mutation in the IGHMBP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2S","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4015349","DOID:0110171","Orphanet:443073","GARD:17751","MEDGEN:863786","OMIM:616155"],"synonyms":[{"name":"CMT2S","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in IGHMBP2","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2S","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2S","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2S","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy type 2S","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2S","type":"related"},{"name":"IGHMBP2 Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth type 2S","type":"exact"}],"termid":"MONDO:0014511","terms_by_termid":{"MONDO:0014511":null},"xrefs":{"Monarch":{"xref_id":"0014511"}}}


id: PBO:0060471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase pseudogene 1","termid":"PBO:0060471"}


id: GO:0061565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into dAMP, deoxyadenosine monophosphate, to produce dADP. Addition of two phosphate groups produces dATP.","definition_xrefs":["PMID:23416111","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dAMP phosphorylation","termid":"GO:0061565"}


id: MONDO:0018449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired cystic disease-associated renal cell carcinoma is a rare subtype of renal cell carcinoma, occurring in the context of end-stage kidney disease and acquired cystic kidney disease, characterized by a usually well circumscribed, solid, multifocal, bilateral tumor with inter- or intracellular microlumen formation (leading to cribiform architecture). Tumors are often diagnosed incidentally in early stages, although complications caused by renal cysts (dull flank or abdominal pain, fever) or renal parenchymal bleeding may mask the underlying neoplastic process. Most have an indolent behavior.","definition_xrefs":["Orphanet:404514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"acquired cystic disease-associated renal cell carcinoma","secondary_identifiers":["NCIT:C157718","GARD:21722","MEDGEN:1644241","UMLS:C4707179"],"termid":"MONDO:0018449","xrefs":{"Monarch":{"xref_id":"0018449"}}}


id: PBO:0029095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cysteine_synthase_activity","termid":"PBO:0029095"}


id: PBO:0047952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(18)(q21.3)","termid":"PBO:0047952"}


id: GO:0034981
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains CREB and FHL3, and is involved in transcriptional regulation.","definition_xrefs":["PMID:11046156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"FHL3-CREB complex","termid":"GO:0034981"}


id: PR:O74858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04888","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.08","secondary_identifiers":["UniProtKB:O74858"],"synonyms":[{"name":"LysRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lysS","type":"exact"},{"name":"lysyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74858"}


id: FYPO:0000035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize arginine, and therefore requires arginine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for arginine","synonyms":[{"name":"arginine auxotrophy","type":"exact"},{"name":"growth auxotrophic for arginine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for arginine during vegetative growth","type":"exact"}],"termid":"FYPO:0000035"}


id: PBO:0073528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 1","termid":"PBO:0073528"}


id: PBO:0079426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 9","termid":"PBO:0079426"}


id: MONDO:1012467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postpartum dysgalactia syndrome, non-human animal","termid":"MONDO:1011680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postpartum dysgalactia syndrome, pig","secondary_identifiers":["OMIA:001822-9823"],"termid":"MONDO:1012467","xrefs":{"Monarch":{"xref_id":"1012467"}}}


id: GO:0047366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin 3-sulfate = adenosine 3',5'-diphosphate + H+ + quercetin 3,4'-disulfate.","definition_xrefs":["EC:2.8.2.27","RHEA:17205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"quercetin-3-sulfate 4'-sulfotransferase activity","secondary_identifiers":["MetaCyc:2.8.2.27-RXN","KEGG_REACTION:R02633"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3-sulfate 4'-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3-sulfate 4'-sulfotransferase activity","type":"related"},{"name":"flavonol 4'-sulfotransferase activity","type":"related"},{"name":"quercetin-3-sulphate 4'-sulphotransferase activity","type":"exact"}],"termid":"GO:0047366"}


id: PBO:0048055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 4","termid":"PBO:0048055"}


id: SO:0001218
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion that derives from another organism, via the use of recombinant DNA technology.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"transgenic","termid":"SO:0000781"},{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgenic_insertion","synonyms":[{"name":"transgenic insertion","type":"exact"}],"termid":"SO:0001218"}


id: MONDO:0030046
data:
  {"annotated_genes":["SJAG_02584"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87248],"is_not":false,"summary":null,"term":"MONDO:0030046"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02584":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder and structural brain anomalies with or without seizures and spasticity","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5394423","MEDGEN:1711516","OMIM:618890"],"synonyms":[{"name":"NEDBASS","type":"exact"},{"name":"NEURODEVELOPMENTAL DISORDER AND STRUCTURAL BRAIN ANOMALIES WITH OR WITHOUT SEIZURES AND SPASTICITY","type":"exact"},{"name":"neurodevelopmental disorder and structural brain anomalies with or without seizures and spasticity","type":"exact"}],"termid":"MONDO:0030046","terms_by_termid":{"MONDO:0030046":null},"xrefs":{"Monarch":{"xref_id":"0030046"}}}


id: GO:0052795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of alpha-(2->6)-glycosidic linkages of terminal sialic residues in substrates.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete exo-alpha-(2->6)-sialidase activity (obsolete GO:0052795)","synonyms":[{"name":"exo-alpha-(2,6)-sialidase activity","type":"exact"},{"name":"exo-alpha-2,6-sialidase activity","type":"exact"}],"termid":"GO:0052795"}


id: PBO:0031103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_osmotic_stress","termid":"PBO:0031103"}


id: GO:0043470
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685","SJAG_02785","SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77929,74861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[98468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[91536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[71772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[77928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of carbohydrates.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"regulates","term_name":"carbohydrate catabolic process","termid":"GO:0016052"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02785":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of carbohydrate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043470","terms_by_termid":{"GO:0006110":null,"GO:0043456":null,"GO:0045820":null,"GO:1905857":null,"GO:2001172":null}}


id: GO:0008785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octane hydroperoxide + NADH + H+ = H2O + NAD+ + 1-octanol.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alkyl hydroperoxide reductase activity","termid":"GO:0008785"}


id: MONDO:0016576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split hand-split foot malformation (SHFM) refers to a spectrum of genetically and clinically heterogenous terminal limb defect characterized by hypoplasia/ absence of central rays of the hands and feet (that can occur in one to all four digits), median clefts of the hands and/ or feet, aplasia and syndactyly, with a wide range of severity ranging from malformed central finger/ toe to a lobster claw-like appearance of the hands and feet. SHFM can be an isolated malformation or can be a feature in various syndromes (ADULT syndrome, EEC syndrome). SHFM usually follows an autosomal dominant pattern of inheritance with incomplete penetrance, but autosomal recessive and rarely X-linked inheritance have also been reported.","definition_xrefs":["Orphanet:2440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand-foot malformation","secondary_identifiers":["NORD:1731","SCTID:81208006","GARD:6319","MEDGEN:78566","NCIT:C75000","OMIMPS:183600","DOID:0090020","UMLS:C0265554"],"synonyms":[{"name":"FEWER digits","type":"exact"},{"name":"SHFM","type":"exact"},{"name":"Split Hand/Split Foot Malformation","type":"exact"},{"name":"ectrodactyly","type":"exact"},{"name":"isolated split hand-split foot malformation","type":"related"},{"name":"lobster-claw deformity","type":"exact"},{"name":"split hand foot malformation","type":"exact"},{"name":"split hand-split foot malformation","type":"related"},{"name":"split-hand deformity","type":"exact"},{"name":"split-hand/foot malformation","type":"exact"}],"termid":"MONDO:0016576","xrefs":{"Monarch":{"xref_id":"0016576"}}}


id: MONDO:0014924
data:
  {"annotated_genes":["SJAG_02765"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88971],"is_not":false,"summary":null,"term":"MONDO:0014924"}]},"cv_name":"mondo","definition":"Any epilepsy, familial focal, with variable foci in which the cause of the disease is a mutation in the NPRL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial focal epilepsy with variable foci","termid":"MONDO:0020310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02765":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial focal, with variable foci 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081422","GARD:18203","OMIM:617116","MEDGEN:934676","UMLS:C4310709"],"synonyms":[{"name":"FFEVF2","type":"exact"},{"name":"NPRL2 epilepsy, familial focal, with variable foci","type":"exact"},{"name":"epilepsy, familial focal, with variable foci 2","type":"exact"},{"name":"epilepsy, familial focal, with variable foci 2; FFEVF2","type":"exact"},{"name":"epilepsy, familial focal, with variable foci caused by mutation in NPRL2","type":"exact"},{"name":"epilepsy, familial focal, with variable foci type 2","type":"exact"}],"termid":"MONDO:0014924","terms_by_termid":{"MONDO:0014924":null},"xrefs":{"Monarch":{"xref_id":"0014924"}}}


id: GO:0019249
data:
  {"annotated_genes":["SJAG_02988","SJAG_02106","SJAG_04404","SJAG_04674"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59613,60993,61425,63264],"is_not":false,"summary":null,"term":"GO:0019249"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactate, the anion of lactic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02106":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lactate biosynthetic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"lactate anabolism","type":"exact"},{"name":"lactate biosynthesis","type":"exact"},{"name":"lactate formation","type":"exact"},{"name":"lactate synthesis","type":"exact"}],"termid":"GO:0019249","terms_by_termid":{"GO:0019249":null}}


id: GO:0071920
data:
  {"annotated_genes":["SJAG_02720","SJAG_04768","SJAG_03745","SJAG_04601","SJAG_02037"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89308,94091,100027,106218,113274],"is_not":false,"summary":null,"term":"GO:0071920"}]},"cv_name":"cellular_component","definition":"A nuclear body that contains proteins involved in pre-mRNA 3'-end cleavage and polyadenylation, such as DDX1, CSTF2 and CPSFs, as well as the transcription factors TFIIE and TFIIF. Cleavage bodies are localized adjacent to Cajal bodies and are involved in mRNA3'-end processing.","definition_xrefs":["PMID:11598190","PMID:8654386","PMID:10564273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02037":null,"SJAG_02720":null,"SJAG_03745":null,"SJAG_04601":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"cleavage body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071920","terms_by_termid":{"GO:0071920":null}}


id: PBO:0039822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor guanine nucleotide exchange factor 2","termid":"PBO:0039822"}


id: PBO:0069643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 920, pseudogene","termid":"PBO:0069643"}


id: MONDO:0004072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete protoplasmic astrocytoma (obsolete MONDO:0004072)","termid":"MONDO:0004072","xrefs":{"Monarch":{"xref_id":"0004072"}}}


id: MOD:00451
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a propanoyl group.","definition_xrefs":["PubMed:11999733","PubMed:12175151","Unimod:58#N-term","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propanoylated residue","termid":"MOD:01894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino propanoylated residue","synonyms":[{"name":"Propionate labeling reagent light form (N-term & K)","type":"related"},{"name":"Propionyl","type":"related"}],"termid":"MOD:00451"}


id: PBO:0028927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0028927"}


id: GO:0097534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a lymphoid lineage cell from one site to another. A lymphoid lineage cell, also called a lymphoid lineage restricted progenitor cell, is a progenitor cell restricted to the lymphoid lineage.","definition_xrefs":["GOC:pr","PMID:22342843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphoid lineage cell migration","synonyms":[{"name":"lymphoid lineage restricted progenitor cell migration","type":"exact"}],"termid":"GO:0097534"}


id: MONDO:0956965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma SHH activated that is characterized as a molecular subtype by activation of the sonic hedgehog (SHH) pathway and the absence of TP53 mutations.","definition_xrefs":["DOID:0080705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma SHH activated","termid":"MONDO:0850197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma SHH activated and TP53 wild-type","secondary_identifiers":["NCIT:C129443"],"termid":"MONDO:0956965","xrefs":{"Monarch":{"xref_id":"0956965"}}}


id: PBO:0003348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation dependent mannose-6-phosphate cargo receptor (predicted)","termid":"PBO:0003348"}


id: GO:1904942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac ventricle formation.","definition_xrefs":["PMID:23575307","GOC:BHF","GO_REF:0000058","GOC:bc","GOC:TermGenie","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"regulates","term_name":"cardiac ventricle formation","termid":"GO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac ventricle formation","termid":"GO:1904942"}


id: FYPO:0001098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4-nitroquinoline N-oxide. Cells stop growing (and may die) at a concentration of 4-nitroquinoline N-oxide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to 4-nitroquinoline N-oxide","synonyms":[{"name":"hypersensitive to 4-nitroquinoline N-oxide","type":"exact"},{"name":"sensitive to 4-NQO","type":"exact"},{"name":"sensitive to 4-nitroquinoline N-oxide during mitotic cell cycle","type":"related"},{"name":"sensitive to 4-nitroquinoline N-oxide during vegetative growth","type":"exact"},{"name":"sensitive to 4NQO","type":"exact"}],"termid":"FYPO:0001098"}


id: PBO:0073076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDE2 telomere maintenance homolog","termid":"PBO:0073076"}


id: PBO:0119997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAM antisense RNA 2","termid":"PBO:0119997"}


id: PBO:0075195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 7","termid":"PBO:0075195"}


id: PBO:0052391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 28, pseudogene","termid":"PBO:0052391"}


id: PBO:0045271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 18","termid":"PBO:0045271"}


id: GO:0019075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The refolding and structural rearrangements of virion parts to transition from the intermediate virion to the more mature virion. Maturation usually involves proteolysis events and changes in the folding of the virion proteins. Can occur inside the host cell or after release.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus maturation","synonyms":[{"name":"bacteriophage maturation","type":"narrow"},{"name":"viral maturation","type":"exact"}],"termid":"GO:0019075"}


id: PBO:0086504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein; in the Sigma 1278B strain background YLL053C is contiguous with AQY2 which encodes an aquaporin","termid":"PBO:0086504"}


id: GO:0098593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cup shaped specialization of the cytoskeleton that forms a thin layer located just below the apical mass of mature mucin secretory granules in the cytoplasm of goblet cells of the intestinal epithelium. It consists of an orderly network of intermediate filaments and microtubules. Microtubules are arranged vertically, like barrel staves, along the inner aspect of the theta. Intermediate filaments form two networks: an inner, basketlike network and an outer series of circumferential bundles resembling the hoops of a barrel.","definition_xrefs":["PMID:6541604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"goblet cell theca","termid":"GO:0098593"}


id: MONDO:0100307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adult Refsum disease in which the cause of the disease is a mutation in the PEX7 gene.","definition_xrefs":["PMID:12522768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX7 defect","termid":"MONDO:0100272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0005244","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"adult Refsum disease due to PEX7 defect","synonyms":[{"name":"adult Refsum disease due to PEX7 defect","type":"exact"}],"termid":"MONDO:0100307","xrefs":{"Monarch":{"xref_id":"0100307"}}}


id: MONDO:0003831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromophil adenoma of the kidney","termid":"MONDO:0003829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"type 2 papillary adenoma of the kidney","secondary_identifiers":["MEDGEN:311387","DOID:6259","UMLS:C1519710","NCIT:C39810"],"synonyms":[{"name":"type 2 papillary adenoma of the kidney","type":"exact"},{"name":"type 2 renal papillary adenoma","type":"exact"}],"termid":"MONDO:0003831","xrefs":{"Monarch":{"xref_id":"0003831"}}}


id: PBO:0004102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease positive effector (predicted)","termid":"PBO:0004102"}


id: PATO:0001006
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001006 absolute latency (obsolete PATO:0001006)","termid":"PATO:0001006"}


id: GO:0015527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerol phosphate(out) + phosphate(in) = glycerol phosphate(in) + phosphate(out).","definition_xrefs":["TC:2.A.1.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glycerol-phosphate:phosphate antiporter activity","synonyms":[{"name":"glycerol-phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0015527"}


id: GO:0046135
data:
  {"annotated_genes":["SJAG_00957","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92499],"is_not":false,"summary":null,"term":"GO:0046135"},{"annotations":[91037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006216"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73621"],"synonyms":[{"name":"pyrimidine nucleoside breakdown","type":"exact"},{"name":"pyrimidine nucleoside catabolism","type":"exact"},{"name":"pyrimidine nucleoside degradation","type":"exact"}],"termid":"GO:0046135","terms_by_termid":{"GO:0006216":null,"GO:0046135":null}}


id: PBO:0041736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CaM kinase like vesicle associated","termid":"PBO:0041736"}


id: MONDO:0045040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"locational disease characteristic","termid":"MONDO:0045040","xrefs":{"Monarch":{"xref_id":"0045040"}}}


id: PBO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.15","termid":"PBO:0002072"}


id: PBO:0048834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 2","termid":"PBO:0048834"}


id: MONDO:0003441
data:
  {"annotated_genes":["SJAG_01772","SJAG_04003","SJAG_03900","SJAG_01942","SJAG_02007","SJAG_02680","SJAG_03275","SJAG_01236","SJAG_04840","SJAG_03244","SJAG_04966","SJAG_03551","SJAG_03098","SJAG_02210","SJAG_01598","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[87287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[88417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0025691"},{"annotations":[87882,87881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030486"},{"annotations":[87923,87922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030513"},{"annotations":[88774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030958"},{"annotations":[88177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957385"},{"annotations":[86897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"},{"annotations":[88846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[88938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030676"},{"annotations":[88104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010334"},{"annotations":[87956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014889"},{"annotations":[87048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007493"},{"annotations":[87682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010747"}]},"cv_name":"mondo","definition":"A movement disorder characterized by sustained or intermittent muscle contractions, resulting in abnormal movements and/or postures.","definition_xrefs":["NCIT:C34563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrapyramidal and movement disease","termid":"MONDO:0001815"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01236":null,"SJAG_01598":null,"SJAG_01772":null,"SJAG_01942":null,"SJAG_02007":null,"SJAG_02210":null,"SJAG_02680":null,"SJAG_03098":null,"SJAG_03244":null,"SJAG_03275":null,"SJAG_03551":null,"SJAG_03900":null,"SJAG_04003":null,"SJAG_04840":null,"SJAG_04966":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"is_obsolete":false,"name":"dystonic disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:333.90","MEDGEN:3940","UMLS:C0013421","DOID:543","MESH:D020821","ICD10CM:G24","HP:0001332","SCTID:15802004"],"synonyms":[{"name":"dystonia","type":"exact"},{"name":"dystonia disorder","type":"related"},{"name":"dystonia disorders","type":"related"},{"name":"dystonic disease","type":"exact"},{"name":"dystonic disorder","type":"exact"}],"termid":"MONDO:0003441","terms_by_termid":{"MONDO:0007493":null,"MONDO:0007495":null,"MONDO:0010334":null,"MONDO:0010747":null,"MONDO:0012994":null,"MONDO:0014557":null,"MONDO:0014889":null,"MONDO:0015003":null,"MONDO:0025691":null,"MONDO:0030486":null,"MONDO:0030513":null,"MONDO:0030676":null,"MONDO:0030958":null,"MONDO:0957385":null},"xrefs":{"Monarch":{"xref_id":"0003441"}}}


id: PBO:0079871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF1 RNA helicase and ATPase","termid":"PBO:0079871"}


id: PBO:0035855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_calcium_ion","termid":"PBO:0035855"}


id: GO:0047164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biochanin-A + malonyl-CoA = 6'-malonyl-biochanin A + CoA.","definition_xrefs":["EC:2.3.1.115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-malonyltransferase activity","termid":"GO:0050736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"isoflavone-7-O-beta-glucoside 6''-O-malonyltransferase activity","secondary_identifiers":["RHEA:15581","MetaCyc:RXN-4703"],"synonyms":[{"name":"MAT-7","type":"related"},{"name":"flavone (flavonol) 7-O-glycoside malonyltransferase activity","type":"related"},{"name":"flavone/flavonol 7-O-beta-D-glucoside malonyltransferase activity","type":"related"},{"name":"malonyl-CoA:flavone/flavonol 7-O-glucoside malonyltransferase activity","type":"related"},{"name":"malonyl-CoA:isoflavone-7-O-beta-D-glucoside 6''-O-malonyltransferase activity","type":"related"},{"name":"malonyl-coenzyme A:flavone/flavonol-7-O-glycoside malonyltransferase activity","type":"related"},{"name":"malonyl-coenzyme A:isoflavone 7-O-glucoside-6''-malonyltransferase activity","type":"related"}],"termid":"GO:0047164"}


id: GO:0102254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: neoagarotetraose + H2O = 3,6-anhydro-alpha-L-galactopyranose + agarotriose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete neoagarotetraose 1,3-alpha-3,6-anhydro-L-galactosidase activity (obsolete GO:0102254)","termid":"GO:0102254"}


id: GO:0010836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of protein ADP-ribosylation. Protein ADP-ribosylation is the transfer, from NAD, of ADP-ribose to protein amino acids.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ADP-ribosylation","termid":"GO:0010835"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein ADP-ribosylation","synonyms":[{"name":"negative regulation of protein amino acid ADP-ribosylation","type":"exact"}],"termid":"GO:0010836"}


id: PBO:0054939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2353","termid":"PBO:0054939"}


id: PBO:0001991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR91","termid":"PBO:0001991"}


id: PBO:0076846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testin LIM domain protein","termid":"PBO:0076846"}


id: FYPO:0009096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing xylose as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002058","FYPO:0001985","FYPO:0002057","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on xylose carbon source","synonyms":[{"name":"increased growth on xylose carbon source","type":"broad"},{"name":"increased vegetative cell growth on xylose carbon source","type":"exact"}],"termid":"FYPO:0009096"}


id: GO:0060100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"regulation of phagocytosis, engulfment","termid":"GO:0060099"},{"relation_name":"is_a","term_name":"positive regulation of membrane invagination","termid":"GO:1905155"},{"relation_name":"positively_regulates","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phagocytosis, engulfment","termid":"GO:0060100"}


id: PBO:0040345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 2","termid":"PBO:0040345"}


id: PBO:0060759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 3","termid":"PBO:0060759"}


id: MOD:01181
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartate 4-methyl ester.","definition_xrefs":["Unimod:34#D","PubMed:1556110","RESID:AA0435","PubMed:16888766","OMSSA:69","PubMed:9629898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"monomethylated L-aspartic acid","termid":"MOD:01681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-aspartic acid 4-methyl ester","synonyms":[{"name":"(2S)-2-amino-4-methoxy-4-oxobutanoic acid","type":"exact"},{"name":"2-aminobutanedioic acid 4-methyl ester","type":"exact"},{"name":"4-methyl L-2-aminosuccinic acid","type":"exact"},{"name":"4-methyl L-aspartate","type":"exact"},{"name":"4-methyl L-hydrogen aspartate","type":"exact"},{"name":"L-aspartic acid 4-methyl ester","type":"exact"},{"name":"Methyl","type":"related"},{"name":"O4MeAsp","type":"exact"},{"name":"aspartic acid 4-methyl ester","type":"exact"},{"name":"aspartic acid beta-methyl ester","type":"exact"},{"name":"meesterd","type":"exact"}],"termid":"MOD:01181"}


id: PBO:0113460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIID, TFIIF, INO80, SWI/SNF, and NuA3 complexes; involved in RNA polymerase II transcription initiation and in chromatin modification; serves as an additional DNA binding domain for the complex; contains a YEATS domain","termid":"PBO:0113460"}


id: MONDO:0020276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmentation disorder with eye involvement, excluding albinism (obsolete MONDO:0020276)","secondary_identifiers":["Orphanet:98708"],"termid":"MONDO:0020276","xrefs":{"Monarch":{"xref_id":"0020276"}}}


id: GO:0008740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnose = L-rhamnulose.","definition_xrefs":["RHEA:23160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"L-rhamnose isomerase activity","secondary_identifiers":["EC:5.3.1.14","KEGG_REACTION:R02437","MetaCyc:RHAMNISOM-RXN"],"synonyms":[{"name":"L-rhamnose aldose-ketose-isomerase activity","type":"related"},{"name":"L-rhamnose ketol-isomerase activity","type":"related"},{"name":"rhamnose isomerase activity","type":"related"}],"termid":"GO:0008740"}


id: GO:0110150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of biomineralization (obsolete GO:0110150)","synonyms":[{"name":"negative regulation of biomineral formation","type":"narrow"},{"name":"negative regulation of biomineralisation","type":"exact"},{"name":"negative regulation of mineralisation","type":"exact"},{"name":"negative regulation of mineralization","type":"exact"}],"termid":"GO:0110150"}


id: MONDO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urogenital tuberculosis involving a pathogenic inflammatory response in the fallopian tube.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salpingitis","termid":"MONDO:0003619"},{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous salpingitis","secondary_identifiers":["UMLS:C0275933","icd11.foundation:25239933","DOID:0050166","ICD9:016.6","ICD9:016.60","MEDGEN:546960","SCTID:49558004"],"synonyms":[{"name":"fallopian tube tuberculosis","type":"related"}],"termid":"MONDO:0000271","xrefs":{"Monarch":{"xref_id":"0000271"}}}


id: GO:1901802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,5-anhydro-D-fructose.","definition_xrefs":["MetaCyc:PWY-6992","PMID:15716041","UniPathway:UPA00738","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"1,5-anhydro-D-fructose metabolic process","termid":"GO:1901801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose catabolic process","synonyms":[{"name":"1,5-anhydro-D-fructose breakdown","type":"exact"},{"name":"1,5-anhydro-D-fructose catabolism","type":"exact"},{"name":"1,5-anhydro-D-fructose degradation","type":"exact"}],"termid":"GO:1901802"}


id: MONDO:0023083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epimetaphyseal dysplasia cataract","termid":"MONDO:0023083","xrefs":{"Monarch":{"xref_id":"0023083"}}}


id: GO:0036279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm in response to deprivation of glucose.","definition_xrefs":["GOC:al","PMID:3541942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to glucose starvation","termid":"GO:0042149"},{"relation_name":"is_a","term_name":"positive regulation of protein export from nucleus","termid":"GO:0046827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein export from nucleus in response to glucose starvation","termid":"GO:0036279"}


id: MONDO:0100304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peroxisomal single enzyme/protein defect that has its basis in the disruption of bile acid aminotransferase.","definition_xrefs":["MONDO:patterns/inborn_metabolic_disrupts"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal single enzyme/protein defect","termid":"MONDO:0100257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"disorder of bile acid aminotransferase","synonyms":[{"name":"disorder of bile acid aminotransferase","type":"exact"}],"termid":"MONDO:0100304","xrefs":{"Monarch":{"xref_id":"0100304"}}}


id: GO:0000118
data:
  {"annotated_genes":["SJAG_02798","SJAG_02500","SJAG_04389","SJAG_03685","SJAG_00349","SJAG_03145","SJAG_02778","SJAG_04596","SJAG_04186","SJAG_02981","SJAG_00868","SJAG_03694","SJAG_04355","SJAG_03844","SJAG_03982","SJAG_02385","SJAG_01926","SJAG_03627","SJAG_00934","SJAG_03867","SJAG_04097","SJAG_03579","SJAG_02846","SJAG_02990","SJAG_03036","SJAG_05282","SJAG_03884","SJAG_01465","SJAG_00441","SJAG_02439","SJAG_04396","SJAG_02571","SJAG_02466","SJAG_03255","SJAG_05192","SJAG_03441","SJAG_01110","SJAG_04576","SJAG_01804","SJAG_03230","SJAG_01230","SJAG_04758","SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070823"},{"annotations":[82078,90948,96514,77740,77931,64477,80781,61509,108696,116231,63688,79134,77612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033698"},{"annotations":[90949,80501,77613,76567,82079,116141,116232,96515,106653,95101,108697,79937,79135,112447,80782,61510,64478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070210"},{"annotations":[63687,74492,74745,78382,95642,97329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032221"},{"annotations":[106110,68388,80500,95102,80951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034967"},{"annotations":[73430,115279,114088,110116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"},{"annotations":[109833,100859,75445,71849,74697,94232,98540,115307,78744,78075,81835,100128,116714,119460,111029,115135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses histone deacetylase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00349":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_00934":null,"SJAG_01110":null,"SJAG_01230":null,"SJAG_01465":null,"SJAG_01804":null,"SJAG_01926":null,"SJAG_02385":null,"SJAG_02439":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02571":null,"SJAG_02778":null,"SJAG_02798":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03579":null,"SJAG_03627":null,"SJAG_03685":null,"SJAG_03694":null,"SJAG_03844":null,"SJAG_03867":null,"SJAG_03884":null,"SJAG_03982":null,"SJAG_04097":null,"SJAG_04186":null,"SJAG_04355":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04758":null,"SJAG_05192":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"histone deacetylase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"HDAC complex","type":"exact"}],"termid":"GO:0000118","terms_by_termid":{"GO:0000812":null,"GO:0032221":null,"GO:0033698":null,"GO:0034967":null,"GO:0070210":null,"GO:0070823":null,"GO:0070824":null}}


id: PBO:0076142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 1","termid":"PBO:0076142"}


id: MONDO:0005134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune demyelinating disease of the central nervous system that is produced experimentally in animals by the injection of homogenized brain or spinal cord in Freund's adjuvant. Myelin basic protein appears to be the antigen that elicits the hypersensitivity immune response which is characterized by focal areas of lymphocyte and macrophage infiltration into the brain, associated with demyelination and destruction of the blood-brain barrier. Experimental allergic encephalomyelitis (EAE) is used as an animal model for demyelinating diseases of the human central nervous system such as multiple sclerosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"excluded_subClassOf","term_name":"CNS demyelinating autoimmune disease","termid":"MONDO:0006704"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimental autoimmune encephalomyelitis","secondary_identifiers":["EFO:0001066","MESH:D004681"],"termid":"MONDO:0005134","xrefs":{"Monarch":{"xref_id":"0005134"}}}


id: MONDO:0023050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectrodactyly cardiopathy dysmorphism","secondary_identifiers":["UMLS:C2931127","MESH:C536187","MEDGEN:419342"],"synonyms":[{"name":"Van Den Ende Brunner syndrome","type":"related"},{"name":"ectrodactyly of lower limbs, congenital heart defect and characteristic facies","type":"related"}],"termid":"MONDO:0023050","xrefs":{"Monarch":{"xref_id":"0023050"}}}


id: MONDO:0005711
data:
  {"annotated_genes":["SJAG_03786","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859571"},{"annotations":[88620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010606"}]},"cv_name":"mondo","definition":"A posterolateral defect of the diaphragm that allows passage of abdominal viscera into the thorax, leading to respiratory insufficiency and persistent pulmonary hypertension with high mortality.","definition_xrefs":["Orphanet:2140"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"diaphragm disorder","termid":"MONDO:0005728"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_03786":null},"genotype_count":0,"is_obsolete":false,"name":"congenital diaphragmatic hernia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1481","MESH:D065630","MEDGEN:68625","NCIT:C98893","EFO:0007216","DOID:3827","MedDRA:10010439","MESH:D006551","NANDO:1200911","NANDO:2100040","OMIMPS:142340","icd11.foundation:1414428936","NANDO:2200210","UMLS:C0235833"],"synonyms":[{"name":"CDH","type":"exact"},{"name":"agenesis of hemidiaphragm","type":"related"},{"name":"congenital diaphragmatic defect","type":"related"},{"name":"congenital diaphragmatic hernia","type":"exact"},{"name":"diaphragmatic hernia","type":"broad"},{"name":"unilateral agenesis of diaphragm","type":"related"}],"termid":"MONDO:0005711","terms_by_termid":{"MONDO:0010606":null,"MONDO:0859571":null},"xrefs":{"Monarch":{"xref_id":"0005711"}}}


id: PR:Q9UTL0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic spindle-associated MMXD complex subunit MIP18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01940","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIP18 family protein C144.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.16","secondary_identifiers":["UniProtKB:Q9UTL0"],"synonyms":[{"name":"Spom972h-FAM96B","type":"exact"}],"termid":"PR:Q9UTL0"}


id: PBO:0073167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SECIS binding protein 2 like","termid":"PBO:0073167"}


id: PBO:0065269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 30","termid":"PBO:0065269"}


id: PBO:0000823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER heat shock protein BiP","termid":"PBO:0000823"}


id: MONDO:0017098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated focal cortical dysplasia type I","termid":"MONDO:0017095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia type Ic","secondary_identifiers":["MEDGEN:1842276","NANDO:1200567","GARD:20986","Orphanet:268987","UMLS:C5679766"],"synonyms":[{"name":"FCD type Ic","type":"exact"}],"termid":"MONDO:0017098","xrefs":{"Monarch":{"xref_id":"0017098"}}}


id: MONDO:0958123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal origin of the pulmonary artery","termid":"MONDO:0015239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated pulmonary artery sling","secondary_identifiers":["Orphanet:658574"],"termid":"MONDO:0958123","xrefs":{"Monarch":{"xref_id":"0958123"}}}


id: PBO:0041472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 42","termid":"PBO:0041472"}


id: PR:Q9USU2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dimethyladenosine transferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03397","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethyladenosine transferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.02","secondary_identifiers":["UniProtKB:Q9USU2"],"synonyms":[{"name":"18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"18S rRNA dimethylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DIMT1","type":"exact"}],"termid":"PR:Q9USU2"}


id: GO:2000377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reactive oxygen species metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of reactive oxygen species metabolic process","synonyms":[{"name":"regulation of ROS metabolic process","type":"exact"},{"name":"regulation of reactive oxygen species metabolism","type":"exact"}],"termid":"GO:2000377"}


id: PBO:0043606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen like tail subunit of asymmetric acetylcholinesterase","termid":"PBO:0043606"}


id: GO:0098975
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The postsynapse of a neuromuscular junction. In vertebrate muscles this includes the motor end-plate, consisting of postjunctional folds of the sarcolemma.","definition_xrefs":["GOC:dos","Wikipedia:Neuromuscular_junction&oldid=723623502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynapse","termid":"GO:0098794"},{"relation_name":"part_of","term_name":"neuromuscular junction","termid":"GO:0031594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynapse of neuromuscular junction","termid":"GO:0098975"}


id: GO:0102971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + phosphinothricin = H+ + coenzyme A(4-) + N-acetylphosphinatothricinate.","definition_xrefs":["GOC:pz","EC:2.3.1.183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"phosphinothricin N-acetyltransferase activity","secondary_identifiers":["RHEA:12597","MetaCyc:RXN-9382"],"termid":"GO:0102971"}


id: MONDO:0032894
data:
  {"annotated_genes":["SJAG_04021"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88514],"is_not":false,"summary":null,"term":"MONDO:0032894"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04021":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with epilepsy, spasticity, and brain atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618741","MEDGEN:1717952","UMLS:C5394027"],"synonyms":[{"name":"NEDESBA","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH EPILEPSY, SPASTICITY, AND BRAIN ATROPHY","type":"related"}],"termid":"MONDO:0032894","terms_by_termid":{"MONDO:0032894":null},"xrefs":{"Monarch":{"xref_id":"0032894"}}}


id: PBO:0085630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in fluoride export; nearly identical to FEX1, and deletion of both proteins results in a large increase in fluoride sensitivity compared with the single mutant; contains two FEX domains connected by a linker; part of a widespread family of conserved fluoride export proteins","termid":"PBO:0085630"}


id: GO:0031227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the endoplasmic reticulum membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of endoplasmic reticulum membrane (obsolete GO:0031227)","synonyms":[{"name":"intrinsic to endoplasmic reticulum membrane","type":"narrow"}],"termid":"GO:0031227"}


id: MOD:01634
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-aspartic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid removal","termid":"MOD:01634"}


id: PBO:0044035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 4 Y-linked","termid":"PBO:0044035"}


id: GO:1905184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of protein serine/threonine phosphatase activity.","definition_xrefs":["GO_REF:0000059","PMID:16950131","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein serine/threonine phosphatase activity (obsolete GO:1905184)","synonyms":[{"name":"activation of protein serine/threonine phosphatase activity","type":"narrow"},{"name":"activation of serine/threonine specific protein phosphatase activity","type":"narrow"},{"name":"positive regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"up regulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"up regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"up-regulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"up-regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"upregulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"upregulation of serine/threonine specific protein phosphatase activity","type":"exact"}],"termid":"GO:1905184"}


id: FYPO:0001279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to oxidative stress is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during cellular response to oxidative stress","synonyms":[{"name":"increased RNA accumulation during cellular response to oxidative stress","type":"related"},{"name":"increased RNA level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"increased RNA level during oxidative stress response","type":"exact"},{"name":"increased mRNA level during cellular response to oxidative stress","type":"narrow"},{"name":"increased transcript level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0001279"}


id: FYPO:0003768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to mitochondrion","synonyms":[{"name":"normal protein localisation to mitochondrion","type":"exact"},{"name":"normal protein localization to mitochondria","type":"exact"},{"name":"normal protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"normal protein localization to mitochondrion during vegetative growth","type":"exact"}],"termid":"FYPO:0003768"}


id: PBO:0041053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 4","termid":"PBO:0041053"}


id: PBO:0045905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 3","termid":"PBO:0045905"}


id: PBO:0084959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYND domain-containing protein; component of the Mub1p-Ubr2p-Rad6p ubiquitin ligase complex, required for ubiquitination and degradation of Rpn4p; interacts with Ubr2p (E3) and indirectly with Rad6p (E2); short-lived protein degraded in a Ubr2p/Rad6p dependent manner; proposed to function as both a partner and substrate of the Ubr2p/Rad6p ubiquitin ligase; similar to the A. nidulans samB gene","termid":"PBO:0084959"}


id: GO:1902285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that is involved in neuron projection guidance.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:22790009","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway","termid":"GO:0071526"},{"relation_name":"part_of","term_name":"neuron projection guidance","termid":"GO:0097485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in neuron projection guidance","synonyms":[{"name":"semaphorin-plexin signaling pathway involved in neurite guidance","type":"narrow"},{"name":"semaphorin-plexin signaling pathway involved in neuron process guidance","type":"exact"},{"name":"semaphorin-plexin signaling pathway involved in neuron protrusion guidance","type":"exact"},{"name":"semaphorin-plexin signaling pathway involved in neuronal cell projection guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in neurite guidance","type":"narrow"},{"name":"semaphorin-plexin signalling pathway involved in neuron process guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in neuron projection guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in neuron protrusion guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in neuronal cell projection guidance","type":"exact"}],"termid":"GO:1902285"}


id: PBO:0018176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin family histone deacetylase Hst2","termid":"PBO:0018176"}


id: GO:0018992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in an organism's germ line.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line sex determination","termid":"GO:0018992"}


id: GO:0099141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to protozoan","termid":"GO:0001562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to protozoan","termid":"GO:0099141"}


id: GO:0016607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.","definition_xrefs":["PMID:28977640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ribonucleoprotein granule","termid":"GO:0140168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear speck","synonyms":[{"name":"nuclear speckle","type":"exact"},{"name":"nuclear speckles","type":"exact"},{"name":"speckle domain","type":"narrow"},{"name":"speckle focus","type":"related"},{"name":"splicing speckle","type":"exact"}],"termid":"GO:0016607"}


id: PBO:0090605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta (WD repeat) subunit Gnr1","termid":"PBO:0090605"}


id: FYPO:0003645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein serine phosphorylation during vegetative growth (obsolete FYPO:0003645)","synonyms":[{"name":"normal peptidyl-serine phosphorylation during vegetative growth","type":"exact"},{"name":"normal protein serine phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003645"}


id: PBO:0046339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 4","termid":"PBO:0046339"}


id: PBO:0045767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA delta isomerase 2","termid":"PBO:0045767"}


id: GO:0032213
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the semi-conservative replication of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"regulates","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"regulation of telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032213","terms_by_termid":{"GO:0032215":null}}


id: MONDO:0017271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal ichthyosis syndrome with prominent hair abnormalities (obsolete MONDO:0017271)","secondary_identifiers":["Orphanet:281222"],"termid":"MONDO:0017271","xrefs":{"Monarch":{"xref_id":"0017271"}}}


id: PBO:0065878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB29, member RAS oncogene family","termid":"PBO:0065878"}


id: MONDO:0022576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilirubin induced brain injury in the newborn","termid":"MONDO:0022576","xrefs":{"Monarch":{"xref_id":"0022576"}}}


id: PBO:0068543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 149, pseudogene","termid":"PBO:0068543"}


id: PBO:0026783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_synthesis_involved_in_mitotic_DNA_replication","termid":"PBO:0026783"}


id: PBO:0071695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 1","termid":"PBO:0071695"}


id: MONDO:0009756
data:
  {"annotated_genes":["SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88752],"is_not":false,"summary":null,"term":"MONDO:0009756"}]},"cv_name":"mondo","definition":"Niemann-Pick disease type A is a very severe subtype of Niemann-Pick disease, an autosomal recessive lysosomal disease, and is characterized clinically by onset in infancy or early childhood with failure to thrive, hepatosplenomegaly, and rapidly progressive neurodegenerative disorders.","definition_xrefs":["Orphanet:77292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"acid sphingomyelinase deficiency","termid":"MONDO:0100464"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002525","MONDO:0005066","MONDO:0005046","MONDO:0002561","MONDO:0005328"],"is_obsolete":false,"name":"Niemann-Pick disease type A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C126561","UMLS:C0268242","NANDO:1200061","OMIM:257200","NANDO:2201206","GARD:7206","MESH:D052536","SCTID:52165006","DOID:0070111","icd11.foundation:530611243","MEDGEN:78650"],"synonyms":[{"name":"Niemann-PICK disease, type A","type":"related"},{"name":"Niemann-Pick disease, Intermediate, protracted neurovisceral","type":"related"},{"name":"sphingomyelin lipidosis","type":"related"},{"name":"sphingomyelinase deficiency","type":"related"}],"termid":"MONDO:0009756","terms_by_termid":{"MONDO:0009756":null},"xrefs":{"Monarch":{"xref_id":"0009756"}}}


id: MONDO:0014637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"DOCK2 deficiency","secondary_identifiers":["GARD:12653","UMLS:C4225328","MEDGEN:901370","DOID:0111951","OMIM:616433","Orphanet:447737"],"synonyms":[{"name":"IMD40","type":"related"},{"name":"immunodeficiency 40","type":"related"},{"name":"immunodeficiency type 40","type":"exact"}],"termid":"MONDO:0014637","xrefs":{"Monarch":{"xref_id":"0014637"}}}


id: GO:0102620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-geranylgeranylindole + O2 + NADPH + H+ = 10,11-epoxy-3-geranylgeranylindole + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-geranylgeranylindole NADPH:oxygen oxidoreductase (10,11-epoxidizing) activity (obsolete GO:0102620)","termid":"GO:0102620"}


id: MONDO:0004610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple carboxylase deficiency (obsolete MONDO:0004610)","termid":"MONDO:0004610","xrefs":{"Monarch":{"xref_id":"0004610"}}}


id: PBO:0063236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 1","termid":"PBO:0063236"}


id: SO:0001138
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Gamma turns, defined for 3 residues i,( i+1),( i+2) if a hydrogen bond exists between residues i and i+2 and the phi and psi angles of residue i+1 fall within 40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_turn_motif","termid":"SO:0001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"gamma_turn","secondary_identifiers":["BS:00219"],"synonyms":[{"name":"gamma turn","type":"exact"}],"termid":"SO:0001138"}


id: GO:0062108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to a non-growing cell tip.","definition_xrefs":["PMID:18328707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to non-growing cell tip","termid":"GO:0062107"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell tip","termid":"GO:1903067"},{"relation_name":"negatively_regulates","term_name":"protein localization to non-growing cell tip","termid":"GO:1902487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to non-growing cell tip","termid":"GO:0062108"}


id: PBO:0075715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP3 antisense RNA 4","termid":"PBO:0075715"}


id: PBO:0066575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras homolog, mTORC1 binding","termid":"PBO:0066575"}


id: MONDO:0003298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the vulva. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C40326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar leiomyoma","secondary_identifiers":["UMLS:C1520087","DOID:5142","MEDGEN:274417"],"synonyms":[{"name":"leiomyoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva leiomyoma","type":"exact"},{"name":"vulvar leiomyoma","type":"exact"}],"termid":"MONDO:0003298","xrefs":{"Monarch":{"xref_id":"0003298"}}}


id: PBO:0028966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_copper_import","termid":"PBO:0028966"}


id: PBO:0060292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6B pseudogene 1","termid":"PBO:0060292"}


id: GO:0071334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rhamnose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to rhamnose","termid":"GO:0032149"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rhamnose stimulus","synonyms":[{"name":"cellular response to L-rhamnose stimulus","type":"narrow"}],"termid":"GO:0071334"}


id: PBO:0086772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; subunit of evolutionarily conserved EMC (Endoplasmic Reticulum Membrane Complex) implicated in ERAD (ER-associated degradation) and proper assembly of multi-pass transmembrane (TM) proteins; EMC acts in yeast as an ER-mitochondria tether that interacts with outer membrane protein Tom5p of TOM (Translocase of the Mitochondrial Outer Membrane) complex; YDR056C is not an essential protein","termid":"PBO:0086772"}


id: MONDO:0016473
data:
  {"annotated_genes":["SJAG_04213","SJAG_04755","SJAG_01111","SJAG_05313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87023,87022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89159,89158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"A neoplastic syndrome most often caused by mutations in the hSNF5/INI1 tumor suppressor gene. It is characterized by the development of an atypical teratoid/rhabdoid tumor in infancy and early childhood. This highly aggressive tumor develops in the central nervous system as an isolated lesion or in combination with extrarenal or renal rhabdoid tumor. Patients may also develop other central nervous system malignancies including medulloblastoma, supratentorial primitive neuroectodermal tumor, and choroid plexus carcinoma.","definition_xrefs":["NCIT:C93268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdoid tumor","termid":"MONDO:0002728"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial rhabdoid tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17159","MEDGEN:457750","UMLS:C2985524","OMIMPS:609322","Orphanet:231108"],"synonyms":[{"name":"RTPS","type":"exact"},{"name":"familial posterior fossa brain tumor syndrome of infancy","type":"exact"},{"name":"familial posterior fossa brain tumour syndrome of infancy","type":"exact"},{"name":"familial rhabdoid tumor","type":"exact"},{"name":"hereditary rhabdoid tumor","type":"exact"},{"name":"hereditary rhabdoid tumour","type":"exact"},{"name":"rhabdoid predisposition syndrome","type":"exact"},{"name":"rhabdoid tumor predisposition syndrome","type":"exact"},{"name":"rhabdoid tumour predisposition syndrome","type":"exact"}],"termid":"MONDO:0016473","terms_by_termid":{"MONDO:0012252":null,"MONDO:0013224":null},"xrefs":{"Monarch":{"xref_id":"0016473"}}}


id: PBO:0119632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 10","termid":"PBO:0119632"}


id: GO:0006385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase III promoter by the addition of ribonucleotides catalyzed by RNA polymerase III.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase III","secondary_identifiers":["Reactome:R-HSA-73780"],"synonyms":[{"name":"RNA elongation from Pol III promoter","type":"exact"},{"name":"RNA polymerase III transcription elongation factor activity","type":"related"},{"name":"transcription elongation by RNA polymerase III promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006385"}


id: GO:0001965
data:
  {"annotated_genes":["SJAG_02027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74133],"is_not":false,"summary":null,"term":"GO:0001965"}]},"cv_name":"molecular_function","definition":"Binding to a G-protein alpha subunit. The alpha subunit binds a guanine nucleotide.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"G-protein alpha-subunit binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"G-alpha protein subunit binding","type":"exact"}],"termid":"GO:0001965","terms_by_termid":{"GO:0001965":null}}


id: MONDO:0020308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic neurological disorder characterized by childhood to mid-adolescence onset of frequent, brief, diurnal simple partial seizures which usually begin with visual hallucinations (e.g. phosphenes) and/or ictal blindness and may associate non visual seizures (such as deviation of the eyes, oculoclonic seizures), forced eyelid closure and blinking and sensory hallucinations. Post-ictal headache is common while impairment of consciousness is rare.","definition_xrefs":["Orphanet:98816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self-limited childhood occipital epilepsy","termid":"MONDO:0007558"},{"relation_name":"is_a","term_name":"childhood-onset self-limited focal epilepsy syndrome","termid":"MONDO:0800502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"childhood occipital visual epilepsy","secondary_identifiers":["GARD:19582","MEDGEN:581521","UMLS:C0393677"],"synonyms":[{"name":"COVE","type":"exact"},{"name":"benign childhood occipital epilepsy, Gastaut type","type":"exact"},{"name":"childhood occipital epilepsy (Gastaut type)","type":"exact"},{"name":"late-onset benign childhood occipital epilepsy","type":"exact"}],"termid":"MONDO:0020308","xrefs":{"Monarch":{"xref_id":"0020308"}}}


id: MONDO:0044268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete transsexuality (obsolete MONDO:0044268)","secondary_identifiers":["OMIM:600952"],"synonyms":[{"name":"TRANSSEXUALITY","type":"related"}],"termid":"MONDO:0044268","xrefs":{"Monarch":{"xref_id":"0044268"}}}


id: PBO:0069390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 650, pseudogene","termid":"PBO:0069390"}


id: GO:0071246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chlorate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chlorate","termid":"GO:0010157"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chlorate","termid":"GO:0071246"}


id: GO:0090201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of release of cytochrome c from mitochondria","termid":"GO:0090199"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"negatively_regulates","term_name":"release of cytochrome c from mitochondria","termid":"GO:0001836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"negative regulation of release of cytochrome c from mitochondria","termid":"GO:0090201"}


id: MONDO:0019858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic congenital hypothyroidism is a type of primary congenital hypothyroidism whose cause and prevalence are unknown.","definition_xrefs":["Orphanet:95717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism","termid":"MONDO:0018612"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic congenital hypothyroidism","secondary_identifiers":["UMLS:C4273913","SCTID:717334008","MEDGEN:901252","GARD:19298"],"termid":"MONDO:0019858","xrefs":{"Monarch":{"xref_id":"0019858"}}}


id: PR:O14128
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pil2 gene.","definition_xrefs":["UniProtKB:O14128","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid long chain base-responsive protein pil2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.02c","synonyms":[{"name":"Spom972h-pil2","type":"exact"},{"name":"protein kinase inhibitor pil2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14128"}


id: PBO:0089349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Slc1","termid":"PBO:0089349"}


id: MONDO:0011212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensorineural hearing loss, retinal pigment epithelium lesions, discolored teeth","secondary_identifiers":["MESH:C566560","OMIM:602340","UMLS:C1865645","MEDGEN:356334"],"synonyms":[{"name":"sensorineural hearing loss, retinal pigment epithelium lesions, discolored teeth","type":"exact"}],"termid":"MONDO:0011212","xrefs":{"Monarch":{"xref_id":"0011212"}}}


id: MONDO:0010638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by generalized keratosis follicularis, severe proportionate dwarfism and cerebral atrophy. It has been described in six males from one family (three boys and three maternal uncles). Generalized alopecia and microcephaly were also present.","definition_xrefs":["Orphanet:2339"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratosis follicularis-dwarfism-cerebral atrophy syndrome","secondary_identifiers":["MESH:C536158","GARD:3099","UMLS:C1839910","MEDGEN:374340","OMIM:308830"],"synonyms":[{"name":"dwarfism, cerebral atrophy and generalised keratosis follicularis","type":"related"},{"name":"dwarfism, cerebral atrophy and generalized keratosis follicularis","type":"related"},{"name":"keratosis follicularis dwarfism and cerebral atrophy","type":"related"},{"name":"keratosis follicularis, dwarfism, and cerebral atrophy","type":"related"}],"termid":"MONDO:0010638","xrefs":{"Monarch":{"xref_id":"0010638"}}}


id: FYPO:0000286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype observed in the vegetative growth phase of the life cycle in which a population of cells grow poorly in medium that has a low concentration of manganese (Mn2+).","definition_xrefs":["PMID:14723709","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to manganese depletion","synonyms":[{"name":"hypersensitive to manganese depletion","type":"exact"},{"name":"sensitive to manganese depletion during mitotic cell cycle","type":"related"},{"name":"sensitive to manganese depletion during vegetative growth","type":"exact"}],"termid":"FYPO:0000286"}


id: GO:0005617
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete larval serum protein-1 (obsolete GO:0005617)","synonyms":[{"name":"LSP1","type":"exact"},{"name":"larval serum protein-1","type":"exact"}],"termid":"GO:0005617"}


id: PBO:0003418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription related zf-ZZ type zinc finger protein","termid":"PBO:0003418"}


id: PBO:0086853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA binding protein; regulates the cell size requirement for passage through Start and commitment to cell division; WHI4 has a paralog, WHI3, that arose from the whole genome duplication","termid":"PBO:0086853"}


id: GO:0051648
data:
  {"annotated_genes":["SJAG_03005","SJAG_03011","SJAG_04960","SJAG_03864","SJAG_03938","SJAG_02320","SJAG_04391","SJAG_01925","SJAG_02166","SJAG_03357","SJAG_04044","SJAG_00594","SJAG_03268","SJAG_02651"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119754,73023],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[120466],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[101450,103838,67306,90459,60674,119739,116155,92594],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[118186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"},{"annotations":[106478,106812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"Any process in which a vesicle or vesicles are transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00594":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02651":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vesicle localization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic vesicle localization","type":"exact"},{"name":"establishment and maintenance of vesicle localization","type":"exact"},{"name":"vesicle localisation","type":"exact"}],"termid":"GO:0051648","terms_by_termid":{"GO:0030050":null,"GO:0047496":null,"GO:0048205":null,"GO:0090522":null,"GO:0099022":null}}


id: PBO:0060769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B5","termid":"PBO:0060769"}


id: GO:0007519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental sequence of events leading to the formation of adult skeletal muscle tissue. The main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle tissue development","termid":"GO:0014706"},{"relation_name":"part_of","term_name":"skeletal muscle organ development","termid":"GO:0060538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle tissue development","secondary_identifiers":["GO:0048637"],"synonyms":[{"name":"myogenesis","type":"related"}],"termid":"GO:0007519"}


id: MONDO:0007799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatemic bone disease","secondary_identifiers":["OMIM:146350","MESH:C564145","MEDGEN:333534","UMLS:C1840321"],"synonyms":[{"name":"HBD","type":"related"},{"name":"hypophosphatemic bone disease","type":"exact"}],"termid":"MONDO:0007799","xrefs":{"Monarch":{"xref_id":"0007799"}}}


id: FYPO:0007063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any 23S rRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PMID:29641590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rRNA precursor level","termid":"FYPO:0003600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased 23S rRNA precursor level","synonyms":[{"name":"increased 23S rRNA precursor accumulation","type":"related"},{"name":"increased 23S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased 23S rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased 23S rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0007063"}


id: SOFP:citation
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citation","termid":"SOFP:citation"}


id: PBO:0087666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner nuclear membrane Asi ubiquitin ligase complex; the Asi complex targets both misfolded proteins of the inner nuclear membrane-associated degradation (INMAD) pathway and regulators of sterol biosynthesis for ubiquitin-mediated degradation; acts with Asi2p and Asi3p to ensure the fidelity of SPS-sensor signaling by targeting latent unprocessed forms of Stp1p and Stp2p, maintaining the repressed state of gene expression in the absence of inducing amino acids","termid":"PBO:0087666"}


id: GO:0016852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sirohydrochlorin + Co2+ = cobalt-sirohydrochlorin + 2 H+.","definition_xrefs":["RHEA:15893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"sirohydrochlorin cobaltochelatase activity","secondary_identifiers":["MetaCyc:4.99.1.3-RXN","EC:4.99.1.3"],"synonyms":[{"name":"anaerobic cobalt chelatase activity","type":"exact"},{"name":"cobalt-sirohydrochlorin cobalt-lyase (sirohydrochlorin-forming)","type":"related"},{"name":"cobaltochelatase","type":"exact"},{"name":"sirohydrochlorin cobalt-lyase activity","type":"related"}],"termid":"GO:0016852"}


id: PBO:0049775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9 pseudogene 2","termid":"PBO:0049775"}


id: PBO:0088494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha amylase","termid":"PBO:0088494"}


id: MONDO:0023212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Garret-Tripp syndrome","secondary_identifiers":["UMLS:C2930965","MEDGEN:419297","MESH:C535646"],"synonyms":[{"name":"Garret Tripp syndrome","type":"related"},{"name":"Intellectual disability with postaxial polydactyly, congenital absence of hair, severe seborrhoeic dermatitis, and Perthes' disease of the hip","type":"related"},{"name":"intellectual disability with postaxial polydactyly, congenital absence of hair, severe seborrhoeic dermatitis, and Perthes' disease of the hip","type":"related"},{"name":"mental retardation with postaxial polydactyly, congenital absence of hair, severe seborrhoeic dermatitis, and Perthes' disease of the hip","type":"related"},{"name":"polydactyly alopecia seborrheic dermatitis","type":"related"}],"termid":"MONDO:0023212","xrefs":{"Monarch":{"xref_id":"0023212"}}}


id: PBO:0042308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 2","termid":"PBO:0042308"}


id: MONDO:0014065
data:
  {"annotated_genes":["SJAG_00080"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86968],"is_not":false,"summary":null,"term":"MONDO:0014065"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the UQCRQ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00080":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15912","UMLS:C3554607","OMIM:615159","MEDGEN:767521","DOID:0080113"],"synonyms":[{"name":"MC3DN4","type":"related"},{"name":"UQCRQ mitochondrial complex III deficiency","type":"exact"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 4","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in UQCRQ","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 4","type":"related"}],"termid":"MONDO:0014065","terms_by_termid":{"MONDO:0014065":null},"xrefs":{"Monarch":{"xref_id":"0014065"}}}


id: PBO:0067015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 25, pseudogene","termid":"PBO:0067015"}


id: MONDO:0019667
data:
  {"annotated_genes":["SJAG_03467"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010737"}]},"cv_name":"mondo","definition":"Spondyloepiphyseal dysplasia tarda (SEDT) is characterized by disproportionate short stature in adolescence or adulthood, associated with a short trunk and arms and barrel-shaped chest.","definition_xrefs":["Orphanet:93284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia tarda","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112284","NORD:1732","ICD9:756.9","SCTID:51952004"],"termid":"MONDO:0019667","terms_by_termid":{"MONDO:0010737":null},"xrefs":{"Monarch":{"xref_id":"0019667"}}}


id: MONDO:0013097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 8","secondary_identifiers":["MEDGEN:416601","OMIM:613033","UMLS:C2751637"],"synonyms":[{"name":"GLM8","type":"exact"},{"name":"glioma susceptibility 8","type":"exact"}],"termid":"MONDO:0013097","xrefs":{"Monarch":{"xref_id":"0013097"}}}


id: MONDO:0008622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tricho-retino-dento-digital syndrome is an autosomal dominant ectodermal dysplasia syndrome, characterized by uncombable hair syndrome, congenital hypotrichosis and dental abnormalities such as oligodontia or hyperdontia, and associated with early-onset cataract, retinal pigmentary dystrophy, and brachydactyly with brachymetacarpia. Furthermore, hyperactivity and a mild intellectual deficit have been reported in affected patients.","definition_xrefs":["Orphanet:1264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tricho-retino-dento-digital syndrome","secondary_identifiers":["icd11.foundation:200680230","MEDGEN:348658","MESH:C536576","GARD:938","OMIM:191482","SCTID:719910004","UMLS:C1860605"],"synonyms":[{"name":"Bork Stender Schmidt syndrome","type":"related"},{"name":"Bork syndrome","type":"exact"},{"name":"uncombable hair, retinal pigmentary dystrophy, dental anomalies, and brachydactyly","type":"related"},{"name":"uncombable hair-retinal pigmentary dystrophy-dental anomalies-brachydactyly syndrome","type":"exact"}],"termid":"MONDO:0008622","xrefs":{"Monarch":{"xref_id":"0008622"}}}


id: GO:0097527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals which triggers the necroptotic death of a cell. The pathway starts with reception of a signal, is characterized by activation of receptor-interacting serine/threonine-protein kinase 1 and/or 3 (RIPK1/3, also called RIP1/3), and ends when the execution phase of necroptosis is triggered.","definition_xrefs":["PMID:20823910","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"necroptotic signaling pathway","synonyms":[{"name":"necroptosis signaling","type":"related"},{"name":"necroptosis signaling pathway","type":"exact"},{"name":"necroptotic signal transduction","type":"exact"},{"name":"necroptotic signalling pathway","type":"related"}],"termid":"GO:0097527"}


id: GO:0003436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix and contributes to the shaping of the growth plate cartilage of an endochondral bone.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"part_of","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion involved in growth plate cartilage morphogenesis","termid":"GO:0003436"}


id: GO:0046932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate + Na+(out) => ATP + H2O + Na+(in), by a rotational mechanism.","definition_xrefs":["RHEA:58158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sodium-transporting ATP synthase activity, rotational mechanism","secondary_identifiers":["TC:3.A.2.1.2"],"synonyms":[{"name":"sodium-translocating F-type ATPase activity","type":"exact"},{"name":"sodium-transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:0046932"}


id: MONDO:0007288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cataract (disease) in which the cause of the disease is a mutation in the EPHA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 6 multiple types","secondary_identifiers":["MEDGEN:396229","UMLS:C1861825","OMIM:116600","DOID:0110229"],"synonyms":[{"name":"ARCC2","type":"narrow"},{"name":"CTPA","type":"related"},{"name":"CTPP","type":"related"},{"name":"CTPP1","type":"narrow"},{"name":"CTRCT6","type":"exact"},{"name":"EPHA2 cataract (disease)","type":"exact"},{"name":"Posterior polar cataract, 1","type":"related"},{"name":"age related cortical cataract 2","type":"narrow"},{"name":"cataract (disease) caused by mutation in EPHA2","type":"exact"},{"name":"cataract 6, multiple types","type":"related"},{"name":"cataract, age-related cortical, 2","type":"related"},{"name":"cataract, posterior polar, 1","type":"related"},{"name":"posterior polar cataract 1","type":"narrow"}],"termid":"MONDO:0007288","xrefs":{"Monarch":{"xref_id":"0007288"}}}


id: PBO:0012848
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.4.12","termid":"PBO:0012848"}


id: PBO:0069015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 259, pseudogene","termid":"PBO:0069015"}


id: GO:0008746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+.","definition_xrefs":["EC:1.6.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)+ transhydrogenase activity (obsolete GO:0008746)","termid":"GO:0008746"}


id: GO:0099511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Regulation of cytosolic calcium ion concentrations via the directed movement of calcium ions across the plasma-membrane into the cytosol via the action of a voltage-gated calcium ion channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in regulation of cytosolic calcium levels","termid":"GO:0099511"}


id: PBO:0083157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF YNL227C/JJJ1","termid":"PBO:0083157"}


id: PBO:0056668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 6","termid":"PBO:0056668"}


id: PBO:0078214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-7","termid":"PBO:0078214"}


id: PBO:0048440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 3","termid":"PBO:0048440"}


id: PBO:0066259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 2","termid":"PBO:0066259"}


id: GO:0072125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"negative regulation of cell proliferation involved in kidney development","termid":"GO:1901723"},{"relation_name":"negatively_regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glomerular mesangial cell proliferation","termid":"GO:0072125"}


id: MONDO:0011499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Okamoto syndrome (obsolete MONDO:0011499)","termid":"MONDO:0011499","xrefs":{"Monarch":{"xref_id":"0011499"}}}


id: PBO:0116670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 6 interacting protein 1 pseudogene 1","termid":"PBO:0116670"}


id: PR:O13912
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.06c","synonyms":[{"name":"Spom972h-SPAC23C11.06c","type":"exact"}],"termid":"PR:O13912"}


id: PBO:0076207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 17","termid":"PBO:0076207"}


id: PBO:0005811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Sal3","termid":"PBO:0005811"}


id: GO:0120002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic vesicle which contains two urothelial plaques and can deliver these plaques to the apical plasma membrane of urothelial superficial (umbrella) cells. It can also be formed by endocytosis of apical plasma membrane during contractions of the urinary bladder.","definition_xrefs":["PMID:21887288","PMID:21468280","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"fusiform vesicle","termid":"GO:0120002"}


id: GO:0033502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of a steady state level of galactose within a cell.","definition_xrefs":["GOC:mah","PMID:21621292","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular galactose homeostasis (obsolete GO:0033502)","synonyms":[{"name":"cell galactose homeostasis","type":"exact"},{"name":"cellular galactose homeostasis","type":"exact"}],"termid":"GO:0033502"}


id: GO:0043691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peripheral cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism.","definition_xrefs":["PMID:7751809","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"reverse cholesterol transport","termid":"GO:0043691"}


id: SO:0001385
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_amino_acid_feature","synonyms":[{"name":"modified amino acid feature","type":"exact"}],"termid":"SO:0001385"}


id: PR:P24782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P24782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.16c","synonyms":[{"name":"Spom972h-dbp2","type":"exact"},{"name":"p68-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P24782"}


id: MONDO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteoporosis caused by chronic glucocorticoid use. Glucocorticoids impair the replication, differentiation and function of osteoblasts and induce the apoptosis of mature osteoblasts and osteocytes; the also favor osteoclastogenesis leading to an increase in bone resorption.","definition_xrefs":["PMID:17566815","DOID:0060343","PMID:22870429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid-induced osteoporosis","termid":"MONDO:0024651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"glucocorticoid-induced osteoporosis","synonyms":[{"name":"steroid-induced osteoporosis","type":"related"}],"termid":"MONDO:0000757","xrefs":{"Monarch":{"xref_id":"0000757"}}}


id: GO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"},{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell activation involved in immune response","synonyms":[{"name":"T cell activation during immune response","type":"related"},{"name":"T lymphocyte activation during immune response","type":"related"},{"name":"T-cell activation during immune response","type":"related"},{"name":"T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002286"}


id: MONDO:0013325
data:
  {"annotated_genes":["SJAG_02211"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88865],"is_not":false,"summary":null,"term":"MONDO:0013325"}]},"cv_name":"mondo","definition":"COG5-CDG is an extremely rare form of CDG syndrome characterized clinically in the single reported case to date by moderate mental retardation with slow and inarticulate speech, truncal ataxia, and mild hypotonia.","definition_xrefs":["Orphanet:263487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"defect in conserved oligomeric Golgi complex","termid":"MONDO:0017750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02211":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"COG5-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462226","SCTID:721100009","UMLS:C3150876","OMIM:613612","GARD:12348","DOID:0070261"],"synonyms":[{"name":"CDG III","type":"related"},{"name":"CDG syndrome type 3","type":"related"},{"name":"CDG syndrome type III","type":"exact"},{"name":"CDG-III","type":"exact"},{"name":"CDG2I","type":"exact"},{"name":"COG5-CDG","type":"exact"},{"name":"COG5-CDG (CDG-III)","type":"related"},{"name":"COG5-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type III","type":"exact"},{"name":"congenital disorder of glycosylation type 2i","type":"exact"},{"name":"congenital disorder of glycosylation type III","type":"exact"},{"name":"congenital disorder of glycosylation, type III","type":"related"}],"termid":"MONDO:0013325","terms_by_termid":{"MONDO:0013325":null},"xrefs":{"Monarch":{"xref_id":"0013325"}}}


id: PBO:0087449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex that associates with actin filaments; forms a complex with Aim21p that inhibits barbed end F-actin assembly; elevates actin monomer pools to increase endocytotic efficiency and to regulate the distribution of actin between cables and patches; Aim21p/Tda2p forms a larger complex with actin capping proteins Cap1p and Cap2p; TcTex1-type dynein light chain family member; null mutant is sensitive to expression of the top1-T722A allele","termid":"PBO:0087449"}


id: GO:0052108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont during interaction with host (obsolete GO:0052108)","synonyms":[{"name":"growth or development of organism during interaction with host","type":"exact"},{"name":"growth or development of organism in response to host","type":"exact"},{"name":"growth or development of symbiont during interaction with host","type":"exact"}],"termid":"GO:0052108"}


id: MOD:01954
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-selenocysteine residue to dehydroalanine.","definition_xrefs":["PubMed:20805503","PubMed:10220322","PubMed:21420488","PubMed:2914619","ChEBI:17123","PubMed:22031445","PubMed:1815586","PubMed:7947813","PubMed:8239649","RESID:AA0181","PubMed:12781460","PubMed:1547888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Sec)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:01954"}


id: GO:0099050
data:
  {"annotated_genes":["SJAG_02384"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101867],"is_not":false,"summary":null,"term":"GO:0099050"}]},"cv_name":"biological_process","definition":"The membrane scission process that is the final step in the formation of a vesicle, leading to separation from its parent membrane. Vesicle scission involves the constriction of a neck-forming protein complex, consisting e.g. of dynamin, around the budded membrane, leading to vesicle closure during its separation from the parent membrane.","definition_xrefs":["PMID:21779028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane fission","termid":"GO:0090148"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"vesicle scission","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099050","terms_by_termid":{"GO:0099050":null}}


id: PBO:0054848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2262","termid":"PBO:0054848"}


id: PBO:0055400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2830","termid":"PBO:0055400"}


id: GO:0099003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any vesicle-mediated transport that occurs in a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"vesicle-mediated transport in synapse","termid":"GO:0099003"}


id: PBO:0041080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRICK1 pseudogene 1","termid":"PBO:0041080"}


id: GO:0106147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fraxetin.","definition_xrefs":["PMID:29581584","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fraxetin biosynthesis","termid":"GO:0106147"}


id: GO:0051063
data:
  {"annotated_genes":["SJAG_04665","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94301,109211],"is_not":false,"summary":null,"term":"GO:0051063"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dCDP + thioredoxin disulfide + H2O = CDP + thioredoxin.","definition_xrefs":["MetaCyc:CDPREDUCT-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor","termid":"GO:0004748"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"CDP reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CDP reduction","type":"related"}],"termid":"GO:0051063","terms_by_termid":{"GO:0051063":null}}


id: PBO:0047622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fidgetin like 1","termid":"PBO:0047622"}


id: MONDO:0030065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis of corpus callosum, cardiac, ocular, and genital syndrome","secondary_identifiers":["DOID:0080948","MEDGEN:1718475","OMIM:618929","UMLS:C5394523"],"synonyms":[{"name":"ACOGS","type":"exact"},{"name":"AGENESIS OF CORPUS CALLOSUM, CARDIAC, OCULAR, AND GENITAL SYNDROME","type":"exact"},{"name":"agenesis of corpus callosum, cardiac, ocular, and genital syndrome","type":"exact"}],"termid":"MONDO:0030065","xrefs":{"Monarch":{"xref_id":"0030065"}}}


id: PBO:0079007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon TGT) 1-1","termid":"PBO:0079007"}


id: PR:Q9P7P0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1718.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7P0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized acyltransferase C1718.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.04","synonyms":[{"name":"Spom972h-SPBC1718.04","type":"exact"}],"termid":"PR:Q9P7P0"}


id: MONDO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrocalcitonin secretion disease","secondary_identifiers":["ICD9:246.0","DOID:12424","UMLS:C0701822","MEDGEN:675237","SCTID:190303007"],"synonyms":[{"name":"disorder of thyrocalcitonin secretion","type":"exact"}],"termid":"MONDO:0001525","xrefs":{"Monarch":{"xref_id":"0001525"}}}


id: GO:0097375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a spinal sensory neuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A spinal sensory neuron is a sensory neuron that project to the spinal cord.","definition_xrefs":["GOC:pr","CL:0009000","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal sensory neuron axon guidance","termid":"GO:0097375"}


id: MONDO:0005682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the walls of the terminal bronchioles that spreads into the peribronchial alveoli and alveolar ducts. It results in the creation of foci of consolidation, which are surrounded by normal parenchyma. It affects one or more lobes, and is frequently bilateral and basal. It is usually caused by bacteria (e.g., Staphylococcus, Streptococcus, Haemophilus influenzae). Signs and symptoms include fever, cough with production of brown-red sputum, dyspnea, and chest pain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchopneumonia","secondary_identifiers":["SCTID:396285007","UMLS:C0006285","DOID:12375","EFO:0007184","MESH:D001996","icd11.foundation:57624587","ICD9:485","MEDGEN:2737","NCIT:C26710"],"synonyms":[{"name":"bronchial pneumonia","type":"exact"},{"name":"chest infection - bronchopneumonia","type":"exact"},{"name":"chest infection - unspecified bronchopneumonia","type":"exact"},{"name":"lobular pneumonia","type":"exact"}],"termid":"MONDO:0005682","xrefs":{"Monarch":{"xref_id":"0005682"}}}


id: PBO:0071219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 60","termid":"PBO:0071219"}


id: PBO:0112882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxoglutarate dehydrogenase (lipoamide) (e1 component of oxoglutarate dehydrogenase complex), Kgd1","termid":"PBO:0112882"}


id: GO:0098896
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a postsynaptic early endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early endosome membrane","termid":"GO:0031901"},{"relation_name":"is_a","term_name":"postsynaptic endosome membrane","termid":"GO:0098895"},{"relation_name":"part_of","term_name":"postsynaptic early endosome","termid":"GO:0098842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"postsynaptic early endosome membrane","termid":"GO:0098896"}


id: PBO:0050368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 71","termid":"PBO:0050368"}


id: PBO:0005039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar H+-ATPase assembly protein Vma21 (predicted)","termid":"PBO:0005039"}


id: MONDO:0034981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare ophthalmic disorder characterized by a usually congenital and unilateral round or oval, gray, white, or yellowish depression in the optic disk. There may be more than one pit present in one eye, and the anomaly is most commonly found in the inferotemporal region of the optic disk, although any sector may be involved. Patients are often asymptomatic, or may present with visual field defects, in particular paracentral arcuate scotoma connected to an enlarged blind spot. A number of patients develop serous macular detachment, with loss of vision typically becoming apparent in the third or fourth decade of life. [Orphanet:519404]","definition_xrefs":["Orphanet:519404"],"gene_count":0,"genotype_count":0,"name":"obsolete optic disk pit (obsolete MONDO:0034981)","secondary_identifiers":["ICD10CM:Q14.2"],"termid":"MONDO:0034981","xrefs":{"Monarch":{"xref_id":"0034981"}}}


id: FYPO:0004964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer actin cortical patches than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch","termid":"FYPO:0003987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0004803","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"actin cortical patches present in decreased numbers","synonyms":[{"name":"F-actin patches present in decreased numbers","type":"exact"},{"name":"actin cortical patches present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"actin cortical patches present in decreased numbers during vegetative growth","type":"exact"},{"name":"actin cortical patches present in reduced numbers","type":"exact"},{"name":"actin patches present in decreased numbers","type":"exact"},{"name":"decreased actin cortical patch formation during vegetative growth","type":"related"},{"name":"decreased number of actin cortical patches during vegetative growth","type":"exact"},{"name":"fewer actin cortical patches present during vegetative growth","type":"exact"}],"termid":"FYPO:0004964"}


id: MONDO:0024659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Kaposi sarcoma that arises from the colon or rectum.","definition_xrefs":["NCIT:C96510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kaposi's sarcoma","termid":"MONDO:0005055"},{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"},{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colorectal Kaposi sarcoma","secondary_identifiers":["UMLS:C3272833","MEDGEN:474466"],"synonyms":[{"name":"Kaposi's sarcoma (disease) of large intestine","type":"exact"},{"name":"colorectal Kaposi sarcoma","type":"exact"},{"name":"large intestinal Kaposi sarcoma","type":"exact"},{"name":"large intestine Kaposi's sarcoma (disease)","type":"exact"}],"termid":"MONDO:0024659","xrefs":{"Monarch":{"xref_id":"0024659"}}}


id: GO:0046588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of calcium-dependent cell-cell adhesion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of calcium-dependent cell-cell adhesion","termid":"GO:0046586"},{"relation_name":"negatively_regulates","term_name":"calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules","termid":"GO:0016339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of calcium-dependent cell-cell adhesion","synonyms":[{"name":"down regulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"down-regulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"downregulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"inhibition of calcium-dependent cell-cell adhesion","type":"narrow"}],"termid":"GO:0046588"}


id: PBO:0044925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase beta","termid":"PBO:0044925"}


id: GO:0048188
data:
  {"annotated_genes":["SJAG_01325","SJAG_00769","SJAG_02768","SJAG_02329","SJAG_03431","SJAG_00896","SJAG_02170","SJAG_07011"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73047,73663,75725,77281,80314,92555,111316,117708],"is_not":false,"summary":null,"term":"GO:0048188"}]},"cv_name":"cellular_component","definition":"A conserved protein complex that catalyzes methylation of histone H3. In Saccharomyces the complex contains Shg1p, Sdc1p, Swd1p, Swd2p, Swd3p, Spp1p, Bre2p, and the trithorax-related Set1p; in mammals it contains the catalytic subunit (SETD1A or SETD1B), WDR5, WDR82, RBBP5, ASH2L/ASH2, CXXC1/CFP1, HCFC1 and DPY30.","definition_xrefs":["PMID:18838538","PMID:11742990","PMID:11805083","PMID:12488447","PMID:18508253","PMID:11687631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_00896":null,"SJAG_01325":null,"SJAG_02170":null,"SJAG_02329":null,"SJAG_02768":null,"SJAG_03431":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"Set1C/COMPASS complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COMPASS complex","type":"exact"},{"name":"Set1/COMPASS complex","type":"exact"},{"name":"Set1C","type":"exact"}],"termid":"GO:0048188","terms_by_termid":{"GO:0048188":null}}


id: PBO:0071706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 4","termid":"PBO:0071706"}


id: PBO:0090052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker Mto2","termid":"PBO:0090052"}


id: MONDO:0000783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A fruit allergy triggered by Citrus sinensis plant fruit food product.","definition_xrefs":["DOID:0060508"],"gene_count":0,"genotype_count":0,"name":"obsolete orange allergy (obsolete MONDO:0000783)","synonyms":[{"name":"Citrus sinensis fruit allergy","type":"exact"},{"name":"orange allergy","type":"exact"}],"termid":"MONDO:0000783","xrefs":{"Monarch":{"xref_id":"0000783"}}}


id: PBO:0063015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 3","termid":"PBO:0063015"}


id: PBO:0029281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0029281"}


id: GO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloyl-CoA + tyramine = CoA + N-feruloyltyramine.","definition_xrefs":["MetaCyc:TYRAMINE-N-FERULOYLTRANSFERASE-RXN","EC:2.3.1.110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"tyramine N-feruloyltransferase activity","secondary_identifiers":["RHEA:19685"],"synonyms":[{"name":"feruloyl-CoA tyramine N-feruloyl-CoA transferase activity","type":"related"},{"name":"feruloyl-CoA:tyramine N-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"feruloyltyramine synthase activity","type":"related"},{"name":"tyramine N-feruloyl-CoA transferase activity","type":"related"},{"name":"tyramine feruloyltransferase activity","type":"related"}],"termid":"GO:0050366"}


id: MONDO:0014952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-epilepsy-extrapyramidal syndrome","secondary_identifiers":["UMLS:C4310683","GARD:13474","OMIM:617171","MEDGEN:934650","Orphanet:468620"],"synonyms":[{"name":"DYSEIDD","type":"related"},{"name":"dyskinesia, seizures, and intellectual developmental disorder","type":"related"},{"name":"neurodevelopmental disorder with hypotonia, impaired expressive language, and with or without seizures","type":"exact"}],"termid":"MONDO:0014952","xrefs":{"Monarch":{"xref_id":"0014952"}}}


id: FYPO:0000064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 2-deoxyglucose than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to 2-deoxyglucose","synonyms":[{"name":"resistance to 2-DOG","type":"exact"},{"name":"resistance to 2-deoxyglucose during mitotic cell cycle","type":"related"},{"name":"resistance to 2-deoxyglucose during vegetative growth","type":"exact"},{"name":"resistant to 2-DOG","type":"exact"},{"name":"resistant to 2-deoxy-D-glucose","type":"exact"}],"termid":"FYPO:0000064"}


id: PBO:0047152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 183 member B, pseudogene","termid":"PBO:0047152"}


id: PBO:0043772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX20 pseudogene 1","termid":"PBO:0043772"}


id: MONDO:0006400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma of the salivary gland characterized by serous acinar cell differentiation. The vast majority of cases occur in the parotid gland. It usually presents as a slowly enlarging mass. A minority of patients experience pain. It may recur or metastasize. Multiple recurrences and metastasis to cervical lymph nodes are usually associated with a poor prognosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acinar cell carcinoma","termid":"MONDO:0004965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"salivary gland acinic cell carcinoma","secondary_identifiers":["MEDGEN:79030","NCIT:C8013","EFO:1000513","UMLS:C0279738"],"synonyms":[{"name":"acinic cell carcinoma of salivary gland","type":"exact"},{"name":"acinic cell carcinoma of the salivary gland","type":"exact"},{"name":"acinic cell neoplasm of salivary gland","type":"exact"},{"name":"acinic cell neoplasm of the salivary gland","type":"exact"},{"name":"acinic cell tumor of salivary gland","type":"exact"},{"name":"acinic cell tumor of the salivary gland","type":"exact"},{"name":"acinic cell tumour of salivary gland","type":"exact"},{"name":"acinic cell tumour of the salivary gland","type":"exact"},{"name":"salivary gland acinic cell cancer","type":"exact"},{"name":"salivary gland acinic cell neoplasm","type":"exact"},{"name":"salivary gland acinic cell tumor","type":"exact"},{"name":"salivary gland acinic cell tumour","type":"exact"}],"termid":"MONDO:0006400","xrefs":{"Monarch":{"xref_id":"0006400"}}}


id: GO:0015666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of endonucleolytic cleavage of DNA in a site-specific manner, resulting in double-strand breaks.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0140097","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"restriction endodeoxyribonuclease activity","synonyms":[{"name":"restriction endonuclease activity","type":"exact"},{"name":"restriction enzyme activity","type":"exact"}],"termid":"GO:0015666"}


id: MONDO:0008479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of skeletal dysplasia associated with short stature, developmental coxa vara, progressive hip deformity, simulated 'corner fractures' of long tubular bones and vertebral body abnormalities (mostly oval vertebral bodies).","definition_xrefs":["Orphanet:93315"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete type 2 collagen-related bone disorder (obsolete MONDO:0019686)","termid":"MONDO:0019686"},{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"},{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylometaphyseal dysplasia, 'corner fracture' type","secondary_identifiers":["UMLS:C0432221","SCTID:254078005","OMIM:184255","DOID:0112297","MEDGEN:98146","MESH:C535793","GARD:4991","icd11.foundation:1295452752"],"synonyms":[{"name":"SMDCF","type":"related"},{"name":"Sutcliffe SmD","type":"related"},{"name":"Sutcliffe type of spondylometaphyseal dysplasia","type":"related"},{"name":"spondylometaphyseal dysplasia Sutcliffe type","type":"related"},{"name":"spondylometaphyseal dysplasia corner fracture type","type":"related"},{"name":"spondylometaphyseal dysplasia, Sutcliffe type","type":"exact"},{"name":"spondylometaphyseal dysplasia, corner fracture type","type":"related"}],"termid":"MONDO:0008479","xrefs":{"Monarch":{"xref_id":"0008479"}}}


id: GO:0014710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of somitomeric trunk muscle development. The somitomeric trunk muscle is derived from somitomeric mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"},{"relation_name":"is_a","term_name":"negative regulation of muscle organ development","termid":"GO:0048635"},{"relation_name":"negatively_regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of somitomeric trunk muscle development","termid":"GO:0014710"}


id: FYPO:0003750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a normal number of nuclear pore complexes.","definition_xrefs":["PMID:9372936","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal nuclear pore density","synonyms":[{"name":"normal NPC density","type":"exact"},{"name":"normal nuclear pore complex density","type":"exact"},{"name":"normal nuclear pore density during mitotic cell cycle","type":"exact"},{"name":"normal nuclear pore density during vegetative growth","type":"exact"},{"name":"nuclear pore complexes present in normal number","type":"exact"},{"name":"nuclear pores present in normal number","type":"exact"}],"termid":"FYPO:0003750"}


id: PBO:0034273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts","termid":"PBO:0034273"}


id: MONDO:1011173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis, non-human animal","termid":"MONDO:1010299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrosis, horse","secondary_identifiers":["OMIA:000750-9796"],"termid":"MONDO:1011173","xrefs":{"Monarch":{"xref_id":"1011173"}}}


id: PR:O74371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32F12.07c gene.","definition_xrefs":["UniProtKB:O74371","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C32F12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.07c","synonyms":[{"name":"Spom972h-SPBC32F12.07c","type":"exact"}],"termid":"PR:O74371"}


id: MOD:01898
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["PubMed:21950656","RESID:AA0569","PubMed:21568297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated L-arginine","termid":"MOD:00783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N2,N2-dimethyl-L-arginine","synonyms":[{"name":"(2S)-5-[(diaminomethylidene)amino]-2-(dimethylamino)pentanoic acid","type":"exact"},{"name":"(2S)-5-carbamimidamido-2-(dimethylamino)pentanoic acid [tautomer]","type":"exact"},{"name":"MOD_RES N2,N2-dimethylarginine","type":"exact"},{"name":"N(alpha),N(alpha)-dimethylarginine","type":"exact"},{"name":"N2,N2-dimethyl-L-arginine","type":"exact"},{"name":"N2,N2-dimethylarginine","type":"exact"}],"termid":"MOD:01898"}


id: PBO:0053194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and EF-hand containing transmembrane protein 1 pseudogene 2","termid":"PBO:0053194"}


id: PBO:0077143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 3","termid":"PBO:0077143"}


id: MONDO:0030854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos/osteogenesis imperfecta syndrome","termid":"MONDO:0016470"},{"relation_name":"is_a","term_name":"COL1A1-related Ehlers-Danlos syndrome","termid":"MONDO:0100599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined osteogenesis imperfecta and Ehlers-Danlos syndrome 1","secondary_identifiers":["UMLS:C5436842","OMIM:619115","GARD:18316","MEDGEN:1763836"],"synonyms":[{"name":"OIEDS Syndrome 1","type":"exact"},{"name":"OIEDS1","type":"exact"},{"name":"combined osteogenesis imperfecta and Ehlers-Danlos syndrome 1","type":"exact"}],"termid":"MONDO:0030854","xrefs":{"Monarch":{"xref_id":"0030854"}}}


id: GO:0016298
data:
  {"annotated_genes":["SJAG_04105","SJAG_04973","SJAG_00321","SJAG_02543","SJAG_03604","SJAG_02089","SJAG_04292","SJAG_00199","SJAG_02100","SJAG_01036","SJAG_02907","SJAG_02161","SJAG_01219","SJAG_02715","SJAG_01198","SJAG_02093","SJAG_01519","SJAG_03204","SJAG_00158","SJAG_02068","SJAG_04323","SJAG_02487","SJAG_04110","SJAG_04790","SJAG_02091"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100712],"is_not":false,"summary":null,"term":"GO:0016298"},{"annotations":[116058,65949,68991,72510,67337,95786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[110789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[79092,80266,72656,80565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047372"},{"annotations":[99665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[74521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[80363,79189,78208,72860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[79873,77656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004620"},{"annotations":[76128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[64012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"},{"annotations":[76928,79197,76777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004771"},{"annotations":[58480,71510,73249,60232,95787,100362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a lipid.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00199":null,"SJAG_00321":null,"SJAG_01036":null,"SJAG_01198":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02068":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02715":null,"SJAG_02907":null,"SJAG_03204":null,"SJAG_03604":null,"SJAG_04105":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04323":null,"SJAG_04790":null,"SJAG_04973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"lipase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-163402","Reactome:R-HSA-163432"],"termid":"GO:0016298","terms_by_termid":{"GO:0004435":null,"GO:0004620":null,"GO:0004622":null,"GO:0004623":null,"GO:0004630":null,"GO:0004767":null,"GO:0004771":null,"GO:0004806":null,"GO:0016298":null,"GO:0034479":null,"GO:0047372":null,"GO:0052714":null}}


id: MONDO:0018232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary bone dysplasia with micromelia (obsolete MONDO:0018232)","secondary_identifiers":["Orphanet:364536"],"synonyms":[{"name":"primary osteodysplasia with micromelia","type":"exact"},{"name":"primary skeletal dysplasia with micromelia","type":"exact"}],"termid":"MONDO:0018232","xrefs":{"Monarch":{"xref_id":"0018232"}}}


id: GO:0014012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of axons outside the central nervous system (outside the brain and spinal cord) following an axonal injury.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system axon regeneration","synonyms":[{"name":"axon regeneration in peripheral nervous system","type":"exact"}],"termid":"GO:0014012"}


id: PBO:0004099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Pom152","termid":"PBO:0004099"}


id: SO:0001314
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1,2'-O-dimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_two_prime_O_dimethyladenosine","secondary_identifiers":["RNAMOD:097"],"synonyms":[{"name":"1,2'-O-dimethyladenosine","type":"exact"},{"name":"m1Am","type":"exact"},{"name":"one two prime O dimethyladenosine","type":"exact"}],"termid":"SO:0001314"}


id: PBO:0079043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-5","termid":"PBO:0079043"}


