# terms

id: PBO:0045592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 3 (pseudogene)","termid":"PBO:0045592"}


id: PBO:0028389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_methylglyoxal","termid":"PBO:0028389"}


id: PR:O74511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase 6 regulatory subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04756","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extragenic suppressor of kinetochore protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.01c","secondary_identifiers":["UniProtKB:O74511"],"synonyms":[{"name":"Spom972h-PPP6R3","type":"exact"}],"termid":"PR:O74511"}


id: PBO:0044589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBT pseudogene 1","termid":"PBO:0044589"}


id: MONDO:0014986
data:
  {"annotated_genes":["SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88831],"is_not":false,"summary":null,"term":"MONDO:0014986"}]},"cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the RAD51 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005046","MONDO:0005570","MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"Fanconi anemia complementation group R","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4284093","DOID:0111090","MEDGEN:924579","OMIM:617244","GARD:16214"],"synonyms":[{"name":"FANCR","type":"exact"},{"name":"Fanconi Anemia, complementation group R","type":"exact"},{"name":"Fanconi Anemia, complementation group type R","type":"exact"},{"name":"Fanconi anaemia caused by mutation in RAD51","type":"exact"},{"name":"Fanconi anaemia complementation group type R","type":"exact"},{"name":"Fanconi anemia caused by mutation in RAD51","type":"exact"},{"name":"Fanconi anemia complementation group type R","type":"exact"},{"name":"Fanconi anemia, complementation GROUP R","type":"related"},{"name":"RAD51 Fanconi anaemia","type":"exact"},{"name":"RAD51 Fanconi anemia","type":"exact"}],"termid":"MONDO:0014986","terms_by_termid":{"MONDO:0014986":null},"xrefs":{"Monarch":{"xref_id":"0014986"}}}


id: PR:O74796
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- orc6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.12","synonyms":[{"name":"Spom972h-orc6","type":"exact"}],"termid":"PR:O74796"}


id: GO:0042136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter biosynthetic process (obsolete GO:0042136)","synonyms":[{"name":"neurotransmitter anabolism","type":"exact"},{"name":"neurotransmitter biosynthesis","type":"exact"},{"name":"neurotransmitter biosynthesis and storage","type":"broad"},{"name":"neurotransmitter biosynthetic process and storage","type":"broad"},{"name":"neurotransmitter formation","type":"exact"},{"name":"neurotransmitter synthesis","type":"exact"}],"termid":"GO:0042136"}


id: PBO:0063567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase B","termid":"PBO:0063567"}


id: PR:O94288
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar complex protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14428:SF5","PRO:DNx","OMA:SCHPO03754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar complex-associated protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.03c","secondary_identifiers":["UniProtKB:O94288"],"synonyms":[{"name":"Spom972h-NOC3L","type":"exact"}],"termid":"PR:O94288"}


id: PBO:0082907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine aminopeptidase with homocysteine-thiolactonase activity; protects cells against homocysteine toxicity; cytosolic protein, selectively transported to vacuole during nitrogen starvation; has bleomycin hydrolase activity in vitro; transcription is regulated by galactose via Gal4p; orthologous to human BLMH","termid":"PBO:0082907"}


id: MONDO:0020010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease that involves the nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious disorder of the nervous system","secondary_identifiers":["NCIT:C27590","Orphanet:98010","SCTID:128116006","UMLS:C0597039","MEDGEN:108926","ICD9:349.89"],"synonyms":[{"name":"nervous system infectious disease","type":"exact"},{"name":"nervous system infectious disorder","type":"exact"}],"termid":"MONDO:0020010","xrefs":{"Monarch":{"xref_id":"0020010"}}}


id: MONDO:0011479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by development of symptoms while standing. It is an autonomic nervous system disorder and the symptoms are relieved once the person sits back down. Symptoms include heart.","definition_xrefs":["EFO:1000645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"inherited orthostatic hypotension","termid":"MONDO:0021272"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"postural orthostatic tachycardia syndrome","secondary_identifiers":["MEDGEN:226970","NCIT:C85020","UMLS:C1299624","DOID:0111154","OMIM:604715","SCTID:371073003","icd11.foundation:1533647472","GARD:13591","MESH:D054972","Orphanet:443236"],"synonyms":[{"name":"POTS","type":"exact"},{"name":"Soldiers heart","type":"related"},{"name":"familial orthostatic tachycardia due to norepinephrine transporter deficiency","type":"exact"},{"name":"irritable heart","type":"exact"},{"name":"neurocirculatory asthenia","type":"related"},{"name":"orhtostatic intolerance","type":"exact"},{"name":"orthostatic intolerance","type":"related"},{"name":"orthostatic intolerance due to NET deficiency","type":"exact"},{"name":"postural tachycardia syndrome due to NET deficiency","type":"exact"},{"name":"soldiers heart","type":"exact"}],"termid":"MONDO:0011479","xrefs":{"Monarch":{"xref_id":"0011479"}}}


id: PBO:0045072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 4","termid":"PBO:0045072"}


id: GO:0031091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle found in blood platelets, which is unique in that it exhibits further compartmentalization and acquires its protein content via two distinct mechanisms: (1) biosynthesis predominantly at the megakaryocyte (MK) level (with some vestigial platelet synthesis) (e.g. platelet factor 4) and (2) endocytosis and pinocytosis at both the MK and circulating platelet levels (e.g. fibrinogen (Fg) and IgG).","definition_xrefs":["PMID:8467233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"platelet alpha granule","secondary_identifiers":["Wikipedia:Platelet_alpha-granule"],"synonyms":[{"name":"platelet alpha-granule","type":"exact"}],"termid":"GO:0031091"}


id: GO:0141177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont mitigates the effects of recognition by a host innate immune effector. Effectors have a direct activity against a symbiont and include complement, antimicrobial peptides, and bacterial restriction enzymes. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19208801","PMID:33330873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of host innate immune response","termid":"GO:0141043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of recognition by host innate immune effector","synonyms":[{"name":"evasion of symbiont recognition by host innate immune effector","type":"exact"}],"termid":"GO:0141177"}


id: RO:0002610
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two entities, where the entities exhibit a statistical dependence relationship. The entities may be statistical variables, or they may be other kinds of entities such as diseases, chemical entities or processes.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_dependence_to","termid":"RO:0002609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"correlated_with","termid":"RO:0002610"}


id: PBO:0027935
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_in_stationary_phase_during_glucose_starvation","termid":"PBO:0027935"}


id: PBO:0015243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin peroxidase Bcp1","termid":"PBO:0015243"}


id: SO:0001513
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of extension of a tandem repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem","termid":"SO:0001513"}


id: MONDO:1012681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy that occurs in dogs due to mutations in the RPGRIP1 and MAP9 genes.","definition_xrefs":["OMIA:001432-9615","PMID:38752391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy, RPGRIP1-related and MAP9-related, dog","synonyms":[{"name":"RPGRIP1-CRD","type":"exact"},{"name":"canine progressive retinal atrophy","type":"related"},{"name":"cone-rod dystrophy 4, dog","type":"related"},{"name":"early-onset cone-rod dystrophy, dog","type":"related"}],"termid":"MONDO:1012681","xrefs":{"Monarch":{"xref_id":"1012681"}}}


id: GO:0043826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5 sulfur + oxygen + 4 H2O = sulfite + thiosulfate + 2 hydrogen sulfide + 9 H+.","definition_xrefs":["PMID:1522063"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfur oxygenase reductase activity (obsolete GO:0043826)","synonyms":[{"name":"SOR","type":"related"},{"name":"sulphur oxygenase reductase activity","type":"exact"}],"termid":"GO:0043826"}


id: GO:0030099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell differentiation","termid":"GO:0030099"}


id: GO:0106136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the structure or function of a symbiont organism, mediated by secretion of lectins which bind to the bacterial surface. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:rjd","PMID:30049880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lectin-induced modified bacterial internalization","synonyms":[{"name":"LIMBI","type":"exact"}],"termid":"GO:0106136"}


id: FYPO:0003360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which superoxide dismutase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal superoxide dismutase activity","termid":"FYPO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000298","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished superoxide dismutase activity","synonyms":[{"name":"superoxide dismutase activity abolished","type":"exact"}],"termid":"FYPO:0003360"}


id: PBO:0030650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_methylamine_level","termid":"PBO:0030650"}


id: PBO:0090969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding and 3'-end processing protein Seb1","termid":"PBO:0090969"}


id: GO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:20951801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"},{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"positively_regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062043"}


id: PBO:0114275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kexin, type I membrane endopeptidase","termid":"PBO:0114275"}


id: PBO:0043205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase, mitochondrial 2","termid":"PBO:0043205"}


id: GO:2000705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dense core granule biogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"dense core granule biogenesis","termid":"GO:0061110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of dense core granule biogenesis","termid":"GO:2000705"}


id: PBO:0043193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 2 like","termid":"PBO:0043193"}


id: GO:0052325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin biosynthetic process","termid":"GO:0045489"},{"relation_name":"is_a","term_name":"cell wall pectin metabolic process","termid":"GO:0052546"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"},{"relation_name":"part_of","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cell wall pectin biosynthetic process","synonyms":[{"name":"cell wall pectin biosynthesis","type":"exact"},{"name":"pectin biosynthesis during cell wall organization and biogenesis","type":"related"}],"termid":"GO:0052325"}


id: MONDO:0008697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acetophenetidin sensitivity (obsolete MONDO:0008697)","secondary_identifiers":["OMIM:200300"],"synonyms":[{"name":"Acetophenetidin sensitivity","type":"exact"}],"termid":"MONDO:0008697","xrefs":{"Monarch":{"xref_id":"0008697"}}}


id: PR:Q9UTC0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zym1 gene.","definition_xrefs":["UniProtKB:Q9UTC0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein zym1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.13","synonyms":[{"name":"Spom972h-zym1","type":"exact"}],"termid":"PR:Q9UTC0"}


id: FYPO:0002116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified transmembrane transporter activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"},{"relation_name":"is_a","term_name":"transmembrane transporter activity phenotype","termid":"FYPO:0002114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000138","FYPO:0001985","FYPO:0000652","FYPO:0002114","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"}


id: GO:0034946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-isopropylbut-3-enoyl-CoA + H2O = 3-isopropylbut-3-enoic acid + CoASH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-isopropylbut-3-enoyl-CoA thioesterase activity (obsolete GO:0034946)","termid":"GO:0034946"}


id: PBO:0025423
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine encephalopathy","termid":"PBO:0025423"}


id: GO:0016668
data:
  {"annotated_genes":["SJAG_03290","SJAG_01162","SJAG_02016","SJAG_05027","SJAG_00489","SJAG_01693","SJAG_04399","SJAG_03653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96932],"is_not":false,"summary":null,"term":"GO:0016668"},{"annotations":[73524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004148"},{"annotations":[80901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004362"},{"annotations":[60776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047134"},{"annotations":[80124,71936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004783"},{"annotations":[81438,75025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00489":null,"SJAG_01162":null,"SJAG_01693":null,"SJAG_02016":null,"SJAG_03290":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.1.-","GO:0016654"],"synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, disulfide as acceptor","type":"exact"},{"name":"oxidoreductase activity, acting on NADH or NADPH, disulphide as acceptor","type":"exact"},{"name":"oxidoreductase activity, acting on a sulfur group of donors, NAD or NADP as acceptor","type":"related"},{"name":"oxidoreductase activity, acting on sulphur group of donors, NAD or NADP as acceptor","type":"exact"}],"termid":"GO:0016668","terms_by_termid":{"GO:0004148":null,"GO:0004362":null,"GO:0004783":null,"GO:0004791":null,"GO:0016668":null,"GO:0047134":null}}


id: GO:0045694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of embryo sac egg cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"embryo sac egg cell differentiation","termid":"GO:0009560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryo sac egg cell differentiation","synonyms":[{"name":"regulation of female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0045694"}


id: PR:O60097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt8 gene.","definition_xrefs":["UniProtKB:O60097","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor spt8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.17c","synonyms":[{"name":"Spom972h-spt8","type":"exact"}],"termid":"PR:O60097"}


id: MONDO:0012862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit-hyperactivity disorder, susceptibility to, 5","secondary_identifiers":["OMIM:612311","UMLS:C2676741","MEDGEN:394114"],"synonyms":[{"name":"ADHD5","type":"exact"},{"name":"attention Deficit-hyperactivity disorder, susceptibility to, type 5","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, 5","type":"exact"},{"name":"motor timing quantitative trait locus","type":"related"}],"termid":"MONDO:0012862","xrefs":{"Monarch":{"xref_id":"0012862"}}}


id: MONDO:1010836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilson disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wilson disease, non-human animal","termid":"MONDO:1010164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson disease, sheep","secondary_identifiers":["OMIA:001071-9940"],"termid":"MONDO:1010836","xrefs":{"Monarch":{"xref_id":"1010836"}}}


id: PATO:0001705
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of violet hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"violet","termid":"PATO:0001424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark violet","termid":"PATO:0001705"}


id: PBO:0053272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A5","termid":"PBO:0053272"}


id: GO:0048344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a paraxial mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate determination","termid":"GO:0048344"}


id: GO:0090718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adaptive immune response that involves one or more immune effector processes and takes place during the effector phase of the adaptive immune response.","definition_xrefs":["ISBN:1405196831","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune effector response","termid":"GO:0090718"}


id: GO:0080186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of non-reproductive plant parts.","definition_xrefs":["PO:0007134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"developmental vegetative growth","termid":"GO:0080186"}


id: PBO:0070415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 1","termid":"PBO:0070415"}


id: GO:1903730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["PMID:25359770","GO_REF:0000059","GOC:TermGenie","PMID:22334681","PMID:24876385"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphatidate phosphatase activity (obsolete GO:1903730)","synonyms":[{"name":"regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"regulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903730"}


id: PBO:0002583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal signaling protein (predicted)","termid":"PBO:0002583"}


id: MONDO:0023607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laurence-Prosser-Rocker syndrome","secondary_identifiers":["MESH:C537882","UMLS:C2931651","MEDGEN:419133"],"synonyms":[{"name":"Hirschsprung's disease associated with congenital heart malformation, broad big toes, and ulnar polydactyly","type":"related"},{"name":"Hirschsprung's disease associated with ulnar polydactyly, polysyndactyly of big toes and ventricular septal defect","type":"related"}],"termid":"MONDO:0023607","xrefs":{"Monarch":{"xref_id":"0023607"}}}


id: PR:O13845
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 39 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01680","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein rsd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.07c","secondary_identifiers":["UniProtKB:O13845"],"synonyms":[{"name":"Spom972h-RBM39","type":"exact"}],"termid":"PR:O13845"}


id: PR:Q10426
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rik1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein rik1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.08","synonyms":[{"name":"Spom972h-rik1","type":"exact"},{"name":"silencing protein rik1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10426"}


id: GO:0031840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 neuromedin U receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromedin U receptor binding","termid":"GO:0042922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 2 neuromedin U receptor binding","synonyms":[{"name":"type 2 neuromedin U receptor ligand","type":"narrow"}],"termid":"GO:0031840"}


id: FYPO:0001323
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121471,121469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[121472,121470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[121456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[121130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"},{"annotations":[121224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004695"},{"annotations":[121223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002227"},{"annotations":[121457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[121327,121328,121329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01956":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_03689":null,"SJAG_04697":null},"genotype_count":8,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"altered level of substance in cell during vegetative growth","references_by_uniquename":{"PMID:23786411":null,"PMID:25318672":null,"PMID:35226668":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_00426","SJAG_04697","SJAG_03575","SJAG_03351","SJAG_01956","SJAG_03689"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","dcr1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","gms1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal level of substance in cell during vegetative growth","type":"exact"},{"name":"altered level of substance in cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001323","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001327":null,"FYPO:0002227":null,"FYPO:0003727":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004695":null,"FYPO:0004982":null,"FYPO_EXT:0000001":null}}


id: PBO:0109809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule crosslinking factor 2","termid":"PBO:0109809"}


id: FYPO:0005261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on galactose carbon source","synonyms":[{"name":"increased growth on galactose carbon source","type":"broad"},{"name":"increased vegetative cell growth on galactose carbon source","type":"exact"}],"termid":"FYPO:0005261"}


id: PBO:0059209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rRNA methyltransferase 1","termid":"PBO:0059209"}


id: PBO:0116466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSD domain protein, human BSDC1 orthologs, unknown biological role","termid":"PBO:0116466"}


id: MOD:01274
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-histidine residue.","definition_xrefs":["Unimod:276#H","PubMed:8597590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N'-[4-(2-aminoethyl)benzenesulfonyl] derivatized histidine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01274"}


id: PBO:0062618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily X member 1","termid":"PBO:0062618"}


id: PBO:0059197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X4","termid":"PBO:0059197"}


id: PBO:0004355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication fork protection complex subunit Swi3","termid":"PBO:0004355"}


id: MONDO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Waldenstroem's macroglobulinemia (obsolete MONDO:0000830)","termid":"MONDO:0000830","xrefs":{"Monarch":{"xref_id":"0000830"}}}


id: GO:0061227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the mesonephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in mesonephros development","synonyms":[{"name":"mesonephros pattern formation","type":"related"},{"name":"mesonephros pattern specification","type":"exact"}],"termid":"GO:0061227"}


id: PBO:0040375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit d pseudogene 3","termid":"PBO:0040375"}


id: SO:0000480
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone which is part of a tiling path. A tiling path is a set of sequencing substrates, typically clones, which have been selected in order to efficiently cover a region of the genome in preparation for sequencing and assembly.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clone","termid":"SO:0000151"},{"relation_name":"is_a","term_name":"tiling_path_fragment","termid":"SO:0000474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tiling_path_clone","synonyms":[{"name":"tiling path clone","type":"exact"}],"termid":"SO:0000480"}


id: GO:0061764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from late endosomes to lysosomes by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the lysosome.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome to lysosome transport via multivesicular body sorting pathway","termid":"GO:0032510"},{"relation_name":"is_a","term_name":"late endosome to vacuole transport","termid":"GO:0045324"},{"relation_name":"is_a","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"late endosome to lysosome transport via multivesicular body sorting pathway","termid":"GO:0061764"}


id: FYPO:0003708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which a normal proportion of cells in the population undergoes conjugation with wild type h+ cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal conjugation frequency","termid":"FYPO:0003797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"part_of","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0000257"],"is_obsolete":false,"name":"normal frequency of conjugation with h+ cells","synonyms":[{"name":"normal conjugation with WT h+ cells","type":"exact"},{"name":"normal frequency of conjugation with h plus cells","type":"exact"},{"name":"normal frequency of mating with h+ cells","type":"exact"}],"termid":"FYPO:0003708"}


id: MONDO:0700061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characteristic in which the cause of the disease is present in some of the cells of the organism, or in all the cells of the organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic vs complete","termid":"MONDO:0700061","xrefs":{"Monarch":{"xref_id":"0700061"}}}


id: MONDO:0023174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete follicular lymphoreticuloma (obsolete MONDO:0023174)","termid":"MONDO:0023174","xrefs":{"Monarch":{"xref_id":"0023174"}}}


id: MONDO:1012355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy, non-human animal","termid":"MONDO:1011872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, domestic cat","secondary_identifiers":["OMIA:001292-9685"],"termid":"MONDO:1012355","xrefs":{"Monarch":{"xref_id":"1012355"}}}


id: PBO:0067487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 621, pseudogene","termid":"PBO:0067487"}


id: GO:0002883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of hypersensitivity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"},{"relation_name":"regulates","term_name":"hypersensitivity","termid":"GO:0002524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hypersensitivity","termid":"GO:0002883"}


id: MONDO:0030307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 55","secondary_identifiers":["DOID:0112337","MEDGEN:1781781","UMLS:C5543580","OMIM:619380"],"synonyms":[{"name":"SPGF55","type":"exact"},{"name":"spermatogenic failure 55","type":"exact"}],"termid":"MONDO:0030307","xrefs":{"Monarch":{"xref_id":"0030307"}}}


id: PBO:0084160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity zinc transporter of the plasma membrane; responsible for the majority of zinc uptake; transcription is induced under low-zinc conditions by the Zap1p transcription factor","termid":"PBO:0084160"}


id: GO:0030705
data:
  {"annotated_genes":["SJAG_00397","SJAG_03673","SJAG_01370","SJAG_01211","SJAG_01224","SJAG_05266","SJAG_02431","SJAG_00368","SJAG_03437","SJAG_03540","SJAG_01863","SJAG_02737","SJAG_02045","SJAG_04143","SJAG_04597","SJAG_02336","SJAG_04001","SJAG_01613","SJAG_02761","SJAG_01546","SJAG_02651","SJAG_02731","SJAG_02286","SJAG_00113","SJAG_05220","SJAG_00140","SJAG_00918","SJAG_01662","SJAG_01775","SJAG_00594","SJAG_00851","SJAG_01297","SJAG_00332","SJAG_03011","SJAG_01371","SJAG_02561","SJAG_03073","SJAG_05319","SJAG_05185"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99472,93703,115942,118953,89586,93238,113033,113384,105178,92842,97090,104887,102637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[108538,113207,103351],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[99547,101131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[101132,78117,89590,93240,99474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[96281],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[105670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[102294,110226,105826,120698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[91591,118924,90984,109459,100520,111864,110853,92830,116094,102432,98667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[93003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"},{"annotations":[118186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"},{"annotations":[106812,106478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The directed movement of substances along cytoskeletal fibers such as microfilaments or microtubules within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03011":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cytoskeleton-dependent intracellular transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030705","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030050":null,"GO:0030989":null,"GO:0032118":null,"GO:0047496":null,"GO:0090561":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1990976":null}}


id: GO:0036482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a neuron in response to hydrogen peroxide.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0036480"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"hydrogen peroxide-induced neuron apoptosis","type":"broad"},{"name":"hydrogen peroxide-induced neuronal apoptosis","type":"broad"},{"name":"neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"}],"termid":"GO:0036482"}


id: PBO:0091413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein beta subunit EtfB","termid":"PBO:0091413"}


id: FYPO:0005825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to iron ions. Cells stop growing (and may die) at a concentration of iron ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to iron","synonyms":[{"name":"hypersensitive to iron","type":"exact"},{"name":"sensitive to iron during mitotic cell cycle","type":"related"},{"name":"sensitive to iron during vegetative growth","type":"exact"},{"name":"sensitive to iron ions","type":"exact"}],"termid":"FYPO:0005825"}


id: GO:0098869
data:
  {"annotated_genes":["SJAG_04953","SJAG_00141","SJAG_04788","SJAG_00489","SJAG_04125","SJAG_00668","SJAG_04399","SJAG_05181","SJAG_04403","SJAG_01199","SJAG_03623","SJAG_03653","SJAG_01734","SJAG_04632","SJAG_04823","SJAG_02630","SJAG_01162","SJAG_03166","SJAG_01216","SJAG_02515","SJAG_03303"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57631,64724,66512,69690,70317,108745],"is_not":false,"summary":null,"term":"GO:0098869"},{"annotations":[106985,97078,119379,110801,120320,101904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[75990,66221,58381,70437,94998,101171,61559,90821,91246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular oxidant detoxification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0098869","terms_by_termid":{"GO:0019430":null,"GO:0061692":null,"GO:0098869":null}}


id: PBO:0075150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 6","termid":"PBO:0075150"}


id: PBO:0013023
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postaxial acrofacial dysostosis syndrome","termid":"PBO:0013023"}


id: PBO:0082154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adaptor protein for various signaling pathways; involved in mating response, invasive/filamentous growth, osmotolerance; acts as an adaptor that links G protein-associated Cdc42p-Ste20p complex to the effector Ste11p to modulate signal transduction","termid":"PBO:0082154"}


id: PBO:0039986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 1","termid":"PBO:0039986"}


id: GO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with four genes, in this order, are produced in the nuclei of D. melanogaster as well as in those of other dipteran species.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000483"}


id: PR:Q9USP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug1 gene.","definition_xrefs":["UniProtKB:Q9USP4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 1 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.03","synonyms":[{"name":"Spom972h-mug1","type":"exact"}],"termid":"PR:Q9USP4"}


id: MONDO:0017081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated encephalocele","termid":"MONDO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"parietal encephalocele","secondary_identifiers":["SCTID:253109005","Orphanet:268826","icd11.foundation:1122294944","MEDGEN:488903","GARD:20970","UMLS:C0431294"],"termid":"MONDO:0017081","xrefs":{"Monarch":{"xref_id":"0017081"}}}


id: MONDO:0012349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive spondylocostal dysostosis in which the cause of the disease is a mutation in the LFNG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive spondylocostal dysostosis","termid":"MONDO:0010180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0006025","MONDO:0005066","MONDO:0005497"],"is_obsolete":false,"name":"spondylocostal dysostosis 3, autosomal recessive","secondary_identifiers":["DOID:0112361","GARD:4973","MEDGEN:377871","OMIM:609813","UMLS:C1853296"],"synonyms":[{"name":"LFNG autosomal recessive spondylocostal dysostosis","type":"exact"},{"name":"SCDO3","type":"related"},{"name":"SCOD3","type":"related"},{"name":"autosomal recessive spondylocostal dysostosis caused by mutation in LFNG","type":"exact"},{"name":"spondylocostal dysostosis 3","type":"related"},{"name":"spondylocostal dysostosis 3, autosomal recessive","type":"exact"}],"termid":"MONDO:0012349","xrefs":{"Monarch":{"xref_id":"0012349"}}}


id: PBO:0075850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2","termid":"PBO:0075850"}


id: GO:0061873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell contraction.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based movement","termid":"GO:1903115"},{"relation_name":"regulates","term_name":"hepatic stellate cell contraction","termid":"GO:0061872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell contraction","termid":"GO:0061873"}


id: PBO:0058477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5584","termid":"PBO:0058477"}


id: PBO:0068669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 50, pseudogene","termid":"PBO:0068669"}


id: PBO:0081446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 304","termid":"PBO:0081446"}


id: PBO:0029013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029013"}


id: PBO:0069528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 797, pseudogene","termid":"PBO:0069528"}


id: MONDO:0022463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anophthalmia megalocornea cardiopathy skeletal anomalies (obsolete MONDO:0022463)","termid":"MONDO:0022463","xrefs":{"Monarch":{"xref_id":"0022463"}}}


id: PBO:0047613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate hydratase pseudogene 2","termid":"PBO:0047613"}


id: PBO:0029365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_tRNA_level","termid":"PBO:0029365"}


id: GO:0047626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + H2O = S-methyl-5'-thioadenosine + L-homoserine + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adenosylmethionine hydrolase activity (obsolete GO:0047626)","synonyms":[{"name":"adenosyl methionine hydrolase activity","type":"exact"}],"termid":"GO:0047626"}


id: GO:0015573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-glucosides from one side of a membrane to the other. Beta-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in a beta configuration.","definition_xrefs":["GOC:mtg_transport","PMID:7883710","GOC:jl","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"beta-glucoside transmembrane transporter activity","secondary_identifiers":["GO:0015582"],"synonyms":[{"name":"beta-glucoside permease activity","type":"exact"}],"termid":"GO:0015573"}


id: PBO:0085792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; GFP-fusion protein is localized to the cytoplasm; transcription induced under conditions of zinc deficiency","termid":"PBO:0085792"}


id: PBO:0084765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial mRNA maturase with a role in splicing; encoded by both exon and intron sequences of partially processed COB mRNA","termid":"PBO:0084765"}


id: GO:0008943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: glyceraldehyde 3-phosphate + phosphate + NAD(P)+ = 3-phospho-D-glyceroyl-phosphate + NAD(P)H + H+, and glyceraldehyde 3-phosphate + H2O + NAD(P)+ = 3-phospho-D-glycerate + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glyceraldehyde-3-phosphate dehydrogenase activity (obsolete GO:0008943)","synonyms":[{"name":"glyceraldehyde-3-phosphate dehydrogenase activity","type":"exact"}],"termid":"GO:0008943"}


id: MONDO:0018511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A epithelial neoplasm that involves the vermiform appendix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendiceal neoplasm","termid":"MONDO:0001236"},{"relation_name":"is_a","term_name":"epithelial tumor of colon","termid":"MONDO:0024479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"epithelial tumor of the appendix","secondary_identifiers":["MEDGEN:1842930","Orphanet:423982","GARD:21766","UMLS:C5680073"],"synonyms":[{"name":"appendiceal epithelial tumor","type":"exact"},{"name":"appendiceal epithelial tumour","type":"exact"},{"name":"vermiform appendix epithelial neoplasm","type":"exact"}],"termid":"MONDO:0018511","xrefs":{"Monarch":{"xref_id":"0018511"}}}


id: MONDO:0019429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked neurodegenerative disorder characterized by intellectual deficit, blindness, convulsions, spasticity, mild hypomyelination and early death. It has been described in about ten male members from two generations of one family. The genetic defect responsible for the disorder is located in the pericentromeric region of the X chromosome, Xp11.3-q12.","definition_xrefs":["Orphanet:85336"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"X-linked neurodegenerative syndrome, Hamel type","secondary_identifiers":["GARD:19062","UMLS:C4305135","MEDGEN:930804","SCTID:718847005"],"termid":"MONDO:0019429","xrefs":{"Monarch":{"xref_id":"0019429"}}}


id: _global:exemplar_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is exemplar of Y if X is the best evidence for Y.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar_of","termid":"_global:exemplar_of"}


id: PBO:0030522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_assembly","termid":"PBO:0030522"}


id: PBO:0064878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 37","termid":"PBO:0064878"}


id: GO:0050470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trimethylamine + H2O + electron-transferring flavoprotein = dimethylamine + formaldehyde + reduced electron-transferring flavoprotein.","definition_xrefs":["MetaCyc:1.5.8.2-RXN","EC:1.5.8.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"trimethylamine dehydrogenase activity","secondary_identifiers":["UM-BBD_enzymeID:r1378","RHEA:11864"],"synonyms":[{"name":"TMADh activity","type":"related"},{"name":"trimethylamine:electron-transferring flavoprotein oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0050470"}


id: PBO:0056173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maelstrom spermatogenic transposon silencer","termid":"PBO:0056173"}


id: SO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which the T3 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T3_RNA_Polymerase_Promoter","synonyms":[{"name":"T3 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001206"}


id: PBO:0052911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-3","termid":"PBO:0052911"}


id: GO:0080184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as the result of a phenylpropanoid stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism. A phenylpropanoid is any of secondary metabolites with structures based on a phenylpropane skeleton. The class includes phenylpropanoid esters, flavonoids, anthocyanins, coumarins and many small phenolic molecules. Phenylpropanoids are also precursors of lignin.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phenylpropanoid","termid":"GO:0080184"}


id: GO:0015387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + H+(out) = K+(in) + H+(in).","definition_xrefs":["TC:2.A.38.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"potassium:proton symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-3","RHEA:28490"],"synonyms":[{"name":"potassium:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015387"}


id: PBO:0005515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp4 (predicted)","termid":"PBO:0005515"}


id: PBO:0059422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome recycling factor pseudogene 1","termid":"PBO:0059422"}


id: PBO:0044227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin pseudogene 1","termid":"PBO:0044227"}


id: PBO:0038794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 1A (pseudogene)","termid":"PBO:0038794"}


id: PBO:0076390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin receptor 3","termid":"PBO:0076390"}


id: GO:1901998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a toxin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:17118486"],"gene_count":0,"genotype_count":0,"name":"obsolete toxin transport (obsolete GO:1901998)","termid":"GO:1901998"}


id: GO:0003412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an epithelial cell that contributes to the shaping of a camera-type eye.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis","termid":"GO:0003412"}


id: PBO:0060589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neighbor of BRCA1 lncRNA 2","termid":"PBO:0060589"}


id: PBO:0066958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 260","termid":"PBO:0066958"}


id: SO:0001456
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A relatively rare amino acid encoded by the codon UAG in some contexts, whereas UAG is a termination codon in other contexts.","definition_xrefs":["PMID:15788401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrrolysine","synonyms":[{"name":"O","type":"exact"},{"name":"Pyl","type":"exact"}],"termid":"SO:0001456"}


id: FYPO:0005089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which RNA polymerase II carboxy-terminal domain kinase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0005447","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000002","FYPO:0006551","FYPO:0000707"],"is_obsolete":false,"name":"abolished RNA polymerase II carboxy-terminal domain kinase activity","synonyms":[{"name":"RNA polymerase II carboxy-terminal domain kinase activity abolished","type":"exact"}],"termid":"FYPO:0005089"}


id: GO:0050540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminomuconate + H2O + H+ = (Z)-5-oxohex-2-enedioate + NH4.","definition_xrefs":["EC:3.5.99.5","RHEA:20996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-aminomuconate deaminase activity","secondary_identifiers":["KEGG_REACTION:R03887","MetaCyc:3.5.99.5-RXN"],"synonyms":[{"name":"2-aminomuconate aminohydrolase activity","type":"related"}],"termid":"GO:0050540"}


id: GO:0052046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by one of the organisms. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via secreted substance (obsolete GO:0052046)","synonyms":[{"name":"modification of host morphology or physiology via effector molecule","type":"narrow"},{"name":"modification of host morphology or physiology via ellicitor","type":"narrow"}],"termid":"GO:0052046"}


id: PATO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-D extent","termid":"PATO:0001708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thickness","termid":"PATO:0000915"}


id: GO:0140282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + lipid II + ATP + H2O = L-glutamate + beta-D-GlcNAc(1->4)-Mur2Ac(oyl-L-Ala-D-isoGln-L-Lys-D-Ala-D-Ala)-diphospho-di-trans,octa-cis-undecaprenol + ADP + phosphate.","definition_xrefs":["PMID:22291598","PMID:30093673","RHEA:57928","PMID:30154570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"carbon-nitrogen ligase activity on lipid II","secondary_identifiers":["EC:6.3.5.13"],"synonyms":[{"name":"L-glutamate--lipid II transaminase activity","type":"exact"},{"name":"undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl pentapeptide amidotransferase (glutamine-hydrolyzing) activity","type":"exact"}],"termid":"GO:0140282"}


id: PBO:0029689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_iron_ion_starvation-induced_proteins","termid":"PBO:0029689"}


id: PBO:0067850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 152","termid":"PBO:0067850"}


id: GO:0022873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + maltose(out) = protein histidine + maltose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-maltose phosphotransferase system transporter activity","synonyms":[{"name":"maltose PTS transporter activity","type":"exact"}],"termid":"GO:0022873"}


id: GO:0017192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of a glutamine residue in protein to form the N5-methyl-L-glutamine derivative. The occurrence of this modification has not been confirmed. Its annotation in sequence databases is either due to the misidentification of 2-pyrrolidone-5-carboxylic acid, or to inappropriate homolog comparisons when proteolytic modification is more probable.","definition_xrefs":["RESID:AA0045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-glutamine modification","termid":"GO:0018199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"N-terminal peptidyl-glutamine acetylation","termid":"GO:0017192"}


id: PBO:0055988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and sterile alpha motif containing 1","termid":"PBO:0055988"}


id: PBO:0069934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1227, pseudogene","termid":"PBO:0069934"}


id: MONDO:0100608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypophosphatasia in which the cause of the disease is a variant with a dominant negative effect or haploinsufficiency in the ALPL gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hypophosphatasia","termid":"MONDO:0018570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426"],"is_obsolete":false,"name":"ALPL-related autosomal dominant hypophosphatasia","termid":"MONDO:0100608","xrefs":{"Monarch":{"xref_id":"0100608"}}}


id: PBO:0109172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKMYT1 associated lncRNA","termid":"PBO:0109172"}


id: PBO:0049611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 14","termid":"PBO:0049611"}


id: PBO:0083550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YJL181W","termid":"PBO:0083550"}


id: GO:1904608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium L-glutamate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:21389115"],"gene_count":0,"genotype_count":0,"name":"obsolete response to monosodium L-glutamate (obsolete GO:1904608)","termid":"GO:1904608"}


id: PBO:0011969
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YLL042C","termid":"PBO:0011969"}


id: PBO:0075531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E11","termid":"PBO:0075531"}


id: PBO:0068788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 25, pseudogene","termid":"PBO:0068788"}


id: PATO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000900 backcross fertile (obsolete PATO:0000900)","termid":"PATO:0000900"}


id: GO:0050851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the cross-linking of an antigen receptor on a B or T cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-activating cell surface receptor signaling pathway","termid":"GO:0002429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"antigen receptor-mediated signaling pathway","synonyms":[{"name":"antigen receptor-mediated signalling pathway","type":"exact"}],"termid":"GO:0050851"}


id: PBO:0059014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 1","termid":"PBO:0059014"}


id: MONDO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cell type cancer (obsolete MONDO:0000404)","termid":"MONDO:0000404","xrefs":{"Monarch":{"xref_id":"0000404"}}}


id: PBO:0044311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b561","termid":"PBO:0044311"}


id: GO:0061660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of Atg12 to a substrate protein via the reaction X-Atg12 + S = X + S-Atg12, where X is either an E2 or E3 enzyme, the X-Atg12 linkage is a thioester bond, and the S-Atg12 linkage is an isopeptide bond between the C-terminal amino acid of Atg12 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Atg12 transferase activity","termid":"GO:0019777"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0140096","GO:0003824","GO:0016740","GO:0019787"],"is_obsolete":false,"name":"Atg12 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061660"}


id: PR:Q9HE02
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med13 gene.","definition_xrefs":["UniProtKB:Q9HE02","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.02c","synonyms":[{"name":"Spom972h-med13","type":"exact"},{"name":"mediator complex subunit 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B srb9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE02"}


id: GO:0032028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the head/neck region of a myosin heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0008092","GO:0003674"],"is_obsolete":false,"name":"myosin head/neck binding","termid":"GO:0032028"}


id: PBO:0042154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCL15-CCL14 readthrough (NMD candidate)","termid":"PBO:0042154"}


id: MONDO:0012077
data:
  {"annotated_genes":["SJAG_00053","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88472,88473],"is_not":false,"summary":null,"term":"MONDO:0012077"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the VAPB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1837728","DOID:0050752","MEDGEN:325237","OMIM:608627","GARD:10499","MESH:C563895"],"synonyms":[{"name":"ALS8","type":"exact"},{"name":"VAPB amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 8","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in VAPB","type":"exact"},{"name":"amyotrophic lateral sclerosis type 8","type":"exact"}],"termid":"MONDO:0012077","terms_by_termid":{"MONDO:0012077":null},"xrefs":{"Monarch":{"xref_id":"0012077"}}}


id: GO:0051874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine-1-phosphate metabolic process","termid":"GO:0006668"},{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphinganine-1-phosphate catabolic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate catabolic process","type":"exact"},{"name":"dihydrosphingosine-1-phosphate catabolism","type":"exact"}],"termid":"GO:0051874"}


id: PBO:0089286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase Hem15","termid":"PBO:0089286"}


id: PR:Q9P6Q2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An enolase-phosphatase E1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01125","PANTHER:PTHR20371:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase-phosphatase E1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.08","secondary_identifiers":["UniProtKB:Q9P6Q2"],"synonyms":[{"name":"2,3-diketo-5-methylthio-1-phosphopentane phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ENOPH1","type":"exact"}],"termid":"PR:Q9P6Q2"}


id: PBO:0088352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldo-keto reductase family protein","termid":"PBO:0088352"}


id: PBO:0066117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 11 member A","termid":"PBO:0066117"}


id: GO:0102471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6C-glucosyl-2-hydroxynaringenin = isovitexin-7-olate + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxynaringenin-6C-glucoside dehydratase activity (obsolete GO:0102471)","termid":"GO:0102471"}


id: GO:0004720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-L-lysyl-peptide + H2O + O2 = peptidyl-allysyl-peptide + NH3 + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diamine oxidase activity","termid":"GO:0052597"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-lysine 6-oxidase activity","secondary_identifiers":["MetaCyc:PROTEIN-LYSINE-6-OXIDASE-RXN","Reactome:R-HSA-2129375","Reactome:R-HSA-2395340","GO:0018056","Reactome:R-HSA-2002466","RHEA:24544"],"synonyms":[{"name":"lysyl oxidase activity","type":"related"},{"name":"protein-L-lysine:oxygen 6-oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0004720"}


id: GO:0008023
data:
  {"annotated_genes":["SJAG_02416","SJAG_03128","SJAG_01610","SJAG_01213","SJAG_03481","SJAG_02057","SJAG_03967","SJAG_00540","SJAG_04353","SJAG_03211","SJAG_02393","SJAG_03061","SJAG_01151","SJAG_03118","SJAG_00483","SJAG_02238","SJAG_04933","SJAG_02097","SJAG_04670","SJAG_00139","SJAG_01149"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76588,80456],"is_not":false,"summary":null,"term":"GO:0008023"},{"annotations":[78048,80445,68488,72852,74300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016593"},{"annotations":[97680,81289,112890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[74071,74730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032044"},{"annotations":[78188,64638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070449"},{"annotations":[73182,79266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035101"},{"annotations":[110998,110841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"},{"annotations":[60367,101837,115174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032783"}]},"cv_name":"cellular_component","definition":"Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00483":null,"SJAG_00540":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01213":null,"SJAG_01610":null,"SJAG_02057":null,"SJAG_02097":null,"SJAG_02238":null,"SJAG_02393":null,"SJAG_02416":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03128":null,"SJAG_03211":null,"SJAG_03481":null,"SJAG_03967":null,"SJAG_04353":null,"SJAG_04670":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0032991","GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"transcription elongation factor complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008023","terms_by_termid":{"GO:0008023":null,"GO:0016593":null,"GO:0032044":null,"GO:0032783":null,"GO:0035101":null,"GO:0070449":null,"GO:0070691":null,"GO:0070692":null}}


id: GO:0015824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proline, pyrrolidine-2-carboxylic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"proline transport","synonyms":[{"name":"L-proline transport","type":"narrow"}],"termid":"GO:0015824"}


id: GO:0160211
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the lipid bilayers that surround an apicoplast and form the apicoplast envelope.","definition_xrefs":["PMID:38865262","PMID:20124342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"apicoplast","termid":"GO:0020011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"apicoplast membrane","termid":"GO:0160211"}


id: MONDO:0012798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, unilateral, with delayed endolymphatic hydrops","secondary_identifiers":["MEDGEN:393762","MESH:C567420","OMIM:612097","UMLS:C2677512"],"synonyms":[{"name":"deafness, unilateral, with delayed endolymphatic hydrops","type":"exact"}],"termid":"MONDO:0012798","xrefs":{"Monarch":{"xref_id":"0012798"}}}


id: PBO:0029257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029257"}


id: PATO:0000822
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000822 taste type value (obsolete PATO:0000822)","termid":"PATO:0000822"}


id: GO:0021781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glial cell.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell fate commitment","termid":"GO:0021781"}


id: PR:Q9UTH3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk6 gene.","definition_xrefs":["UniProtKB:Q9UTH3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.01c","synonyms":[{"name":"Spom972h-ppk6","type":"exact"}],"termid":"PR:Q9UTH3"}


id: MOD:01167
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod","definition_xrefs":["Unimod:424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum pterin containing modification","termid":"MOD:00744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdopterin guanine dinucleotide","synonyms":[{"name":"MolybdopterinGD","type":"related"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"}],"termid":"MOD:01167"}


id: GO:0098686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the giant synapses that form between the mossy fiber axons of dentate gyrus granule cells and the large complex spines of CA3 pyramidal cells. It consists of a giant bouton known as the mossy fiber expansion, synapsed to the complex, multiheaded spine (thorny excresence) of a CA3 pyramidal cell.","definition_xrefs":["PMID:13869693","PMID:23264762","DOI:10.1002/1096-9861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hippocampal mossy fiber to CA3 synapse","termid":"GO:0098686"}


id: MONDO:0005060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually painless malignant tumor that arises from adipose tissue. Microscopically, it may contain a spectrum of neoplastic adipocytes ranging from lipoblasts to pleomorphic malignant adipocytes. Morphologic variants include: well differentiated, dedifferentiated, pleomorphic, and myxoid liposarcoma. The metastatic potential is higher in less differentiated tumors.","definition_xrefs":["NCIT:C3194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipomatous cancer","termid":"MONDO:0002813"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"liposarcoma","secondary_identifiers":["ICDO:8850/3","DOID:3382","MedDRA:10024627","MEDGEN:44177","Orphanet:69078","MESH:D008080","NANDO:2200065","ONCOTREE:LIPO","ICD9:171.9","UMLS:C0023827","GARD:6913","EFO:0000569","NORD:1925","SCTID:254829001"],"synonyms":[{"name":"lip sarcoma","type":"exact"},{"name":"liposarcoma","type":"exact"},{"name":"liposarcoma, malignant","type":"exact"},{"name":"sarcoma of lip","type":"exact"}],"termid":"MONDO:0005060","xrefs":{"Monarch":{"xref_id":"0005060"}}}


id: PBO:0087511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric peroxisomal ABC transport complex, with Pxa2p; required for import of long-chain fatty acids into peroxisomes; similar to human adrenoleukodystrophy transporters ABCD1and ABCD2, and ALD-related proteins; mutations in ABCD1 cause X-linked adrenoleukodystrophy (X-ALD), a peroxisomal disorder; human ABCD1 and ABCD2 can each partially complement yeast pxa1 pxa2 double null mutant","termid":"PBO:0087511"}


id: PBO:0058311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4684","termid":"PBO:0058311"}


id: PBO:0013838
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoPantothenate-Cysteine","termid":"PBO:0013838"}


id: PBO:0076299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin repeat containing nuclear envelope family member 3","termid":"PBO:0076299"}


id: GO:0046537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate; this reaction does not require the cofactor 2,3-bisphosphoglycerate.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity (obsolete GO:0046537)","termid":"GO:0046537"}


id: MONDO:0011319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete activator of liver function 1 (obsolete MONDO:0011319)","secondary_identifiers":["OMIM:603416"],"synonyms":[{"name":"ALFN1","type":"related"},{"name":"Half1","type":"related"},{"name":"RPL21P1","type":"related"},{"name":"activator of liver function 1","type":"exact"},{"name":"activator of liver function type 1","type":"exact"},{"name":"ribosomal PROTEIN L21 pseudogene 1","type":"related"},{"name":"ribosomal Protein L21 pseudogene 1","type":"related"}],"termid":"MONDO:0011319","xrefs":{"Monarch":{"xref_id":"0011319"}}}


id: GO:0004088
data:
  {"annotated_genes":["SJAG_00412","SJAG_00392","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72127,73674,108471],"is_not":false,"summary":null,"term":"GO:0004088"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogencarbonate + L-glutamine + 2 ATP + H2O = carbamoyl phosphate + L-glutamate + 2 ADP + phosphate + 2 H+.","definition_xrefs":["RHEA:18633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CARBPSYN-RXN","Reactome:R-HSA-73577","EC:6.3.5.5"],"synonyms":[{"name":"CPS activity","type":"related"},{"name":"GD-CPSase activity","type":"related"},{"name":"carbamoyl phosphate synthase (glutamine-hydrolyzing) activity","type":"exact"},{"name":"carbamoyl phosphate synthetase activity","type":"related"},{"name":"carbamoyl-phosphate synthase (glutamine-hydrolysing) activity","type":"related"},{"name":"carbamoyl-phosphate synthetase (glutamine-hydrolysing) activity","type":"related"},{"name":"carbamoyl-phosphate synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"carbamoylphosphate synthetase II activity","type":"related"},{"name":"carbamyl phosphate synthetase (glutamine) activity","type":"related"},{"name":"carbon-dioxide::L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating) activity","type":"related"},{"name":"glutamine-dependent carbamoyl-phosphate synthase activity","type":"related"},{"name":"glutamine-dependent carbamyl phosphate synthetase activity","type":"related"},{"name":"hydrogen-carbonate:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating) activity","type":"related"}],"termid":"GO:0004088","terms_by_termid":{"GO:0004088":null}}


id: PBO:0062651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 1 pseudogene","termid":"PBO:0062651"}


id: PBO:0031199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_arrest_in_mitotic_G2_phase_during_glucose_starvation","termid":"PBO:0031199"}


id: GO:0002791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of peptide transport","termid":"GO:0090087"},{"relation_name":"regulates","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of peptide secretion","termid":"GO:0002791"}


id: PBO:0069912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1204, pseudogene","termid":"PBO:0069912"}


id: PBO:0060193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 13, cell surface associated","termid":"PBO:0060193"}


id: PBO:0032742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Tyr-tRNA deacylase Dtd1 (predicted)","termid":"PBO:0032742"}


id: GO:1902746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lens fiber cell differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mr","PMID:17592637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lens fiber cell differentiation","synonyms":[{"name":"regulation of lens fibre cell differentiation","type":"exact"}],"termid":"GO:1902746"}


id: MONDO:0006472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tracheal carcinoma (obsolete MONDO:0006472)","termid":"MONDO:0006472","xrefs":{"Monarch":{"xref_id":"0006472"}}}


id: MONDO:0014192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the ZMYND10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 22","secondary_identifiers":["OMIM:615444","DOID:0110597","GARD:15968","MEDGEN:815873","UMLS:C3809543"],"synonyms":[{"name":"CILD22","type":"exact"},{"name":"ZMYND10 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 22","type":"related"},{"name":"ciliary dyskinesia, primary, 22, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 22","type":"exact"},{"name":"primary ciliary dyskinesia 22 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in ZMYND10","type":"exact"},{"name":"primary ciliary dyskinesia type 22","type":"exact"}],"termid":"MONDO:0014192","xrefs":{"Monarch":{"xref_id":"0014192"}}}


id: GO:0032369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of lipid localization","termid":"GO:1905953"},{"relation_name":"negatively_regulates","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of lipid transport","synonyms":[{"name":"down regulation of lipid transport","type":"exact"},{"name":"down-regulation of lipid transport","type":"exact"},{"name":"downregulation of lipid transport","type":"exact"},{"name":"inhibition of lipid transport","type":"narrow"}],"termid":"GO:0032369"}


id: PBO:0082312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for F1 sector of mitochondrial F1F0 ATP synthase; conserved protein; required for assembly of alpha and beta subunits into F1 sector of mitochondrial F1F0 ATP synthase; human homolog ATPAF2 can complement yeast atp12 mutant; mutation of human homolog reduces active ATP synthase levels and is associated with the disorder ATPAF2 deficiency","termid":"PBO:0082312"}


id: SO:1000186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000186 sequence_variant_causing_cryptic_splice_donor_activation (obsolete SO:1000186)","synonyms":[{"name":"sequence variant causing cryptic splice donor activation","type":"exact"}],"termid":"SO:1000186"}


id: GO:0052359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of glucan in other organism involved in symbiotic interaction (obsolete GO:0052359)","synonyms":[{"name":"catabolism by organism of glucan in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052359"}


id: MONDO:0008579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toes, relative length of first and second","secondary_identifiers":["OMIM:189200","MEDGEN:396051","UMLS:C1861059"],"synonyms":[{"name":"toes, relative length of first and second","type":"exact"}],"termid":"MONDO:0008579","xrefs":{"Monarch":{"xref_id":"0008579"}}}


id: GO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-3 stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-3","termid":"GO:0036015"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-3","synonyms":[{"name":"cellular response to IL-3","type":"exact"}],"termid":"GO:0036016"}


id: PBO:0064041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 75","termid":"PBO:0064041"}


id: PBO:0046708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 6","termid":"PBO:0046708"}


id: MONDO:0001150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an abnormal increase of cerebrospinal fluid in the ventricles of the brain.","definition_xrefs":["NCIT:C3111"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neurodegenerative disease","termid":"MONDO:0005559"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus","secondary_identifiers":["UMLS:C0020255","DOID:10908","icd11.foundation:574533444","MESH:D006849","SCTID:230745008","ICD10CM:G91","MEDGEN:9335"],"synonyms":[{"name":"hydrocephalus, X-linked","type":"narrow"},{"name":"hydrocephalus, nonsyndromic, autosomal recessive","type":"narrow"}],"termid":"MONDO:0001150","xrefs":{"Monarch":{"xref_id":"0001150"}}}


id: PBO:0074336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1","termid":"PBO:0074336"}


id: GO:0033465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cis-zeatin, (2Z)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zeatin biosynthetic process","termid":"GO:0033398"},{"relation_name":"is_a","term_name":"cis-zeatin metabolic process","termid":"GO:0033399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cis-zeatin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-2781"],"synonyms":[{"name":"cis-zeatin anabolism","type":"exact"},{"name":"cis-zeatin biosynthesis","type":"exact"},{"name":"cis-zeatin formation","type":"exact"},{"name":"cis-zeatin synthesis","type":"exact"}],"termid":"GO:0033465"}


id: PBO:0055391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2821","termid":"PBO:0055391"}


id: GO:1990649
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110258],"is_not":false,"summary":null,"term":"GO:1990649"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,2,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,2,4-trisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol-1,2,4,5-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990649","terms_by_termid":{"GO:1990649":null}}


id: PR:P41412
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- res2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle-related protein res2/pct1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.09c","synonyms":[{"name":"Spom972h-res2","type":"exact"}],"termid":"PR:P41412"}


id: MONDO:0022876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortes Lacassie syndrome","termid":"MONDO:0022876","xrefs":{"Monarch":{"xref_id":"0022876"}}}


id: PBO:0068224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 531","termid":"PBO:0068224"}


id: GO:0042265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-asparagine to form peptidyl-hydroxyasparagine.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine hydroxylation (obsolete GO:0042265)","synonyms":[{"name":"peptidyl-aspartic acid/asparagine hydroxylation","type":"broad"}],"termid":"GO:0042265"}


id: GO:0046298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4-dichlorobenzoate metabolic process","termid":"GO:0018898"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2,4-dichlorobenzoate catabolic process","synonyms":[{"name":"2,4-dichlorobenzoate breakdown","type":"exact"},{"name":"2,4-dichlorobenzoate catabolism","type":"exact"},{"name":"2,4-dichlorobenzoate degradation","type":"exact"}],"termid":"GO:0046298"}


id: PBO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine-mismatch binding protein 1","termid":"PBO:0001465"}


id: PBO:0069470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 737, pseudogene","termid":"PBO:0069470"}


id: PBO:0087522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of holo-CPF; holo-CPF is a multiprotein complex and functional homolog of mammalian CPSF, required for the cleavage and polyadenylation of mRNA and snoRNA 3' ends; involved in pre-tRNA processing; binds to the phosphorylated CTD of RNAPII","termid":"PBO:0087522"}


id: PBO:0061050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPAL4 divergent transcript","termid":"PBO:0061050"}


id: PBO:0117384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like domain 2, triacylglycerol lipase","termid":"PBO:0117384"}


id: GO:0008001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrinogen (obsolete GO:0008001)","synonyms":[{"name":"fibrinogen","type":"exact"}],"termid":"GO:0008001"}


id: GO:0060953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to cardiac glial cell fates and their capacity to differentiate into cardiac glial cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell fate commitment","termid":"GO:0021781"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardiac glial cell differentiation","termid":"GO:0060950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac glial cell fate commitment","termid":"GO:0060953"}


id: PBO:0043305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmegin","termid":"PBO:0043305"}


id: FYPO:0000311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a normal germ tube, but does not septate or go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with normal germ tube morphology","termid":"FYPO:0000310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination with normal, unseptated germ tube morphology","synonyms":[{"name":"inviable following spore germination with normal, unseptated germ tube morphology","type":"exact"},{"name":"inviable germinated spore with normal, unseptated germ tube morphology","type":"exact"},{"name":"lethal after spore germination with normal, unseptated germ tube morphology","type":"exact"}],"termid":"FYPO:0000311"}


id: PBO:0057902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3529","termid":"PBO:0057902"}


id: PBO:0065732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 3B","termid":"PBO:0065732"}


id: PBO:0065888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB35 antisense RNA 1","termid":"PBO:0065888"}


id: PATO:0000207
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000207 circulatory function (obsolete PATO:0000207)","termid":"PATO:0000207"}


id: MOD:00017
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to a glycine.","definition_xrefs":["PubMed:6692818","ChEBI:29947","PubMed:1310545","DeltaMass:0","RESID:AA0008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine residue","synonyms":[{"name":"Gly","type":"exact"},{"name":"aminoacetic acid","type":"exact"},{"name":"aminoethanoic acid","type":"exact"},{"name":"azanylethanoic acid","type":"exact"},{"name":"glycine","type":"exact"},{"name":"glycocoll","type":"exact"}],"termid":"MOD:00017"}


id: PBO:0064213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase B domain containing 2","termid":"PBO:0064213"}


id: PBO:0078130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 12-1","termid":"PBO:0078130"}


id: GO:0098045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a virus baseplate.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral tail assembly","termid":"GO:0098003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus baseplate assembly","termid":"GO:0098045"}


id: MONDO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of rheumatic pericarditis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic pericarditis","termid":"MONDO:0024655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"chronic rheumatic pericarditis","secondary_identifiers":["SCTID:78069008","ICD10CM:I09.2","icd11.foundation:1473004877","DOID:1869","ICD9:393","UMLS:C0155561","MEDGEN:510021"],"synonyms":[{"name":"rheumatic pericarditis, chronic","type":"exact"}],"termid":"MONDO:0002133","xrefs":{"Monarch":{"xref_id":"0002133"}}}


id: PBO:0066929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 231","termid":"PBO:0066929"}


id: PBO:0055765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA associated with lymph node metastasis in cervical cancer","termid":"PBO:0055765"}


id: MONDO:0011885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disorder comprising tubulointerstitial nephritis and uveitis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"tubulointerstitial nephritis and uveitis syndrome","secondary_identifiers":["Orphanet:91500","MedDRA:10069039","NCIT:C123021","MESH:C536922","ICD10CM:N10","UMLS:C1843273","OMIM:607665","GARD:9252","MedDRA:10069034","MEDGEN:334715"],"synonyms":[{"name":"Dobrin syndrome","type":"exact"},{"name":"TINU","type":"related"},{"name":"TINU syndrome","type":"exact"},{"name":"TUBULOINTERSTITIAL nephritis with uveitis","type":"related"},{"name":"Tubulointerstitial nephritis and uveitis","type":"exact"},{"name":"acute Tubulointerstitial nephritis","type":"related"},{"name":"acute tubulointerstitial nephritis and uveitis syndrome","type":"exact"}],"termid":"MONDO:0011885","xrefs":{"Monarch":{"xref_id":"0011885"}}}


id: GO:2000341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:0035926","GO:1904207"],"synonyms":[{"name":"chemokine (C-C motif) ligand 2 secretion","type":"narrow"},{"name":"regulation of CCL2 secretion","type":"narrow"},{"name":"regulation of CXCL2 production","type":"exact"},{"name":"regulation of MIP-2 production","type":"exact"},{"name":"regulation of MIP2 production","type":"exact"},{"name":"regulation of SCYB2 production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000341"}


id: PBO:0054015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1345","termid":"PBO:0054015"}


id: PBO:0043903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein 3","termid":"PBO:0043903"}


id: GO:0140149
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The non-collagenous component of interstitial extracellular matrices, including glycoprotein like fibronectin and elastin.","definition_xrefs":["PMID:25701227","PMID:33605520","PMID:39223427","PMID:21123617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"},{"relation_name":"part_of","term_name":"interstitial matrix","termid":"GO:0005614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"non-collagenous component of interstitial matrix","termid":"GO:0140149"}


id: PBO:0070229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 165 pseudogene","termid":"PBO:0070229"}


id: MONDO:0015379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cervical dermoid cyst is a rare, benign cutaneous neoplasm containing keratinized epithelium and dermal derivatives, such as hair follicles, sweat and sebaceous glands, smooth muscle or fibroadipose tissue which usually manifests as a slow-growing, painless mass in the submandibular or sublingual space. Depending on the location, and especially after sudden enlargement, it can cause dyspnea, dysphagia or dysphonia.","definition_xrefs":["Orphanet:141046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermoid cyst","termid":"MONDO:0002378"},{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"},{"relation_name":"is_a","term_name":"neoplasm of neck","termid":"MONDO:0021351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical dermoid cyst","secondary_identifiers":["MEDGEN:1643725","GARD:19937","UMLS:C4706299","SCTID:763129001"],"synonyms":[{"name":"dermoid cyst of the neck","type":"exact"}],"termid":"MONDO:0015379","xrefs":{"Monarch":{"xref_id":"0015379"}}}


id: PBO:0077599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11B","termid":"PBO:0077599"}


id: FYPO:0002514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein palmitoylation during meiosis","synonyms":[{"name":"abnormal protein palmitoylation during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002514"}


id: GO:0018041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-glycine acid amide by hydrolysis and oxidation of an interior Gly-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0088"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glycine amidation (obsolete GO:0018041)","termid":"GO:0018041"}


id: PBO:0052376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 20A","termid":"PBO:0052376"}


id: PBO:0039769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 4","termid":"PBO:0039769"}


id: PBO:0078221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 10-2","termid":"PBO:0078221"}


id: GO:0150106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell-cell junction.","definition_xrefs":["GOC:bc","PMID:26706435","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell-cell junction","termid":"GO:0150106"}


id: MONDO:0013990
data:
  {"annotated_genes":["SJAG_00900"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88868],"is_not":false,"summary":null,"term":"MONDO:0013990"}]},"cv_name":"mondo","definition":"A novel very rare form of pontocerebellar hypoplasia (see this term) characterized clinically by progressive microencephaly, feeding difficulties, severe developmental delay, although walking may be achieved, hypotonia often associated with increased muscle tone of lower extremities and deep tendon reflexes, joint deformities in the lower extremities, and occasionally complex seizures. PCH8 is caused by a loss-of-function mutation in the CHMP1A gene. MRI demonstrates a pontocerebellar hypoplasia with vermis and hemispheres equally affected and mild to severely reduced cerebral white matter volume with a fully formed very thin corpus callosum.","definition_xrefs":["Orphanet:324569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060277","GARD:17488","OMIM:614961","MEDGEN:767123","SCTID:718611007","UMLS:C3554209"],"synonyms":[{"name":"CHMP1A non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"PCH8","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in CHMP1A","type":"exact"},{"name":"pontocerebellar hypoplasia due to CHMP1A mutation","type":"exact"},{"name":"pontocerebellar hypoplasia type 8","type":"exact"},{"name":"pontocerebellar hypoplasia, type 8","type":"related"}],"termid":"MONDO:0013990","terms_by_termid":{"MONDO:0013990":null},"xrefs":{"Monarch":{"xref_id":"0013990"}}}


id: PBO:0045783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDAR associated via death domain","termid":"PBO:0045783"}


id: PBO:0057647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1243","termid":"PBO:0057647"}


id: GO:0043734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the oxidative demethylation of N1-methyladenine and N3-methylcytosine in DNA, with concomitant decarboxylation of 2-oxoglutarate and releases oxidized methyl group on N1-methyladenine and N3-methylcytosine as formaldehyde.","definition_xrefs":["PMID:19786499"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA-N1-methyladenine dioxygenase activity (obsolete GO:0043734)","synonyms":[{"name":"AlkB","type":"narrow"},{"name":"alpha-ketoglutarate-dependent dioxygenase","type":"narrow"}],"termid":"GO:0043734"}


id: PBO:0046205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B pseudogene 2","termid":"PBO:0046205"}


id: SO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Similarity due to common ancestry.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved","termid":"SO:0000856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous","termid":"SO:0000857"}


id: MONDO:0007669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal cysts and diabetes syndrome (RCAD) is a rare form of maturity-onset diabetes of the young (MODY) characterized clinically by heterogeneous cystic renal disease and early-onset familial non-autoimmune diabetes. Pancreatic atrophy, liver dysfunction and genital tract anomalies are also features of the syndrome.","definition_xrefs":["Orphanet:93111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0019254","MONDO:0004335","MONDO:0005015","MONDO:0005066"],"is_obsolete":false,"name":"renal cysts and diabetes syndrome","secondary_identifiers":["OMIM:137920","DECIPHER:47","DOID:0111101","GARD:10221","MESH:C535520","NCIT:C123018","SCTID:446641003","UMLS:C0431693","MEDGEN:96569","NANDO:2201073"],"synonyms":[{"name":"CAKUT with diabetes","type":"exact"},{"name":"FJHN atypical","type":"related"},{"name":"FJHN, atypical","type":"related"},{"name":"HNF1B-MODY","type":"exact"},{"name":"HNF1B-related renal cysts and diabetes syndrome","type":"exact"},{"name":"MODY type 5","type":"related"},{"name":"MODY5","type":"exact"},{"name":"RCAD","type":"exact"},{"name":"RCAD syndrome","type":"exact"},{"name":"atypical FJHN","type":"exact"},{"name":"atypical familial juvenile hyperuricemic nephropathy","type":"exact"},{"name":"congenital anomalies of the kidney and urinary tract with diabetes","type":"exact"},{"name":"familial hypoplastic glomerulocystic kidney","type":"exact"},{"name":"glomerulocystic kidney disease, hypoplastic type","type":"related"},{"name":"glomerulocystic kidney, familial hypoplastic","type":"related"},{"name":"hepatocyte nuclear Factor 1-beta-associated monogenic diabetes","type":"exact"},{"name":"hyperuricemic nephropathy, familial juvenile, atypical","type":"related"},{"name":"hypoplastic type glomerulocystic kidney disease","type":"exact"},{"name":"maturity onset diabetes of the Young, type 5","type":"exact"},{"name":"maturity-onset diabetes of the Young, type 5","type":"related"},{"name":"maturity-onset diabetes of the young type 5","type":"related"},{"name":"renal cysts and diabetes syndrome","type":"exact"},{"name":"renal cysts-maturity-onset diabetes of the young syndrome","type":"exact"},{"name":"renal dysfunction-early-onset diabetes syndrome","type":"exact"}],"termid":"MONDO:0007669","xrefs":{"Monarch":{"xref_id":"0007669"}}}


id: MONDO:1011849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myasthenia, non-human animal","secondary_identifiers":["OMIA:000684"],"termid":"MONDO:1011849","xrefs":{"Monarch":{"xref_id":"1011849"}}}


id: MONDO:0958353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of congenital muscular dystrophy characterized by congenital weakness, hypotonia, proximal joint contractures, marked hyperlaxity of the distal joints, attainment of independent ambulation which is subsequently lost and uniform respiratory insufficiency during the teenage years.","definition_xrefs":["Orphanet:646113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen 6-related congenital muscular dystrophy","termid":"MONDO:0958077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"intermediate collagen VI-related muscular dystrophy","secondary_identifiers":["MEDGEN:1853152","UMLS:C5816698"],"termid":"MONDO:0958353","xrefs":{"Monarch":{"xref_id":"0958353"}}}


id: PBO:0081302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 84","termid":"PBO:0081302"}


id: PR:P40372
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl301 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L3-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.03","synonyms":[{"name":"Spom972h-rpl301","type":"exact"}],"termid":"PR:P40372"}


id: MONDO:0009947
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87617],"is_not":false,"summary":null,"term":"MONDO:0009947"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited glutathione synthetase deficiency","termid":"MONDO:0017909"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0019241"}],"interesting_parent_ids":["MONDO:0019241","MONDO:0005066","MONDO:0005046"],"is_obsolete":false,"name":"glutathione synthetase deficiency with 5-oxoprolinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:97988","UMLS:C0398746","SCTID:39112005","GARD:17330","icd11.foundation:2005562438","Orphanet:289846","DOID:0081034","ICD9:270.8","OMIM:266130"],"synonyms":[{"name":"5-oxoprolinuria","type":"related"},{"name":"GSSD","type":"related"},{"name":"glutathione synthetase deficiency","type":"related"},{"name":"pyroglutamic aciduria","type":"related"}],"termid":"MONDO:0009947","terms_by_termid":{"MONDO:0009947":null},"xrefs":{"Monarch":{"xref_id":"0009947"}}}


id: GO:0140331
data:
  {"annotated_genes":["SJAG_03050","SJAG_02516","SJAG_00669"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60410,63630,70238],"is_not":false,"summary":null,"term":"GO:0140331"}]},"cv_name":"biological_process","definition":"The movement of an aminophospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminophospholipid transport","termid":"GO:0015917"},{"relation_name":"is_a","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_02516":null,"SJAG_03050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"aminophospholipid translocation","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0140331","terms_by_termid":{"GO:0140331":null}}


id: FYPO:0008017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glutamate as the nitrogen source.","definition_xrefs":["PMID:7903653","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on glutamate nitrogen source","synonyms":[{"name":"normal cell population growth on glutamate nitrogen source","type":"exact"}],"termid":"FYPO:0008017"}


id: PBO:0038889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin 2","termid":"PBO:0038889"}


id: PR:Q10483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UBX domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17C9.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.11c","secondary_identifiers":["UniProtKB:Q10483"],"synonyms":[{"name":"Spom972h-UBXN1","type":"exact"}],"termid":"PR:Q10483"}


id: GO:0031321
data:
  {"annotated_genes":["SJAG_04275","SJAG_04271","SJAG_03688","SJAG_04010","SJAG_03250","SJAG_04781","SJAG_00114","SJAG_03915","SJAG_05309","SJAG_04615","SJAG_00821","SJAG_04470","SJAG_04901","SJAG_02529","SJAG_02241","SJAG_00826","SJAG_01483","SJAG_02320","SJAG_00405","SJAG_04922","SJAG_01769","SJAG_04080","SJAG_03536","SJAG_04483","SJAG_00486","SJAG_00663","SJAG_03746","SJAG_02248","SJAG_00971"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74776,93355,106915],"is_not":false,"summary":null,"term":"GO:0031321"},{"annotations":[100724,112087,99447,97254,115925,120565,109338,120866,121049,107228,101807,99484,103626,93144],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[109670,99448,101737,108781,115926,104840,94151,101736,106053,98763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[96380,102026,101738,101739,107959,117973],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"During ascospore formation, the process in which each haploid nucleus becomes encapsulated by a double membrane.","definition_xrefs":["GOC:mah","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_01483":null,"SJAG_01769":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_03250":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0030437","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"ascospore-type prospore assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ascospore-type prospore formation","type":"exact"},{"name":"forespore formation","type":"related"}],"termid":"GO:0031321","terms_by_termid":{"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0070583":null}}


id: PBO:0049201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIK1 antisense RNA 2","termid":"PBO:0049201"}


id: PBO:0035777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_spindle_pole_body_oscillation","termid":"PBO:0035777"}


id: PBO:0000967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit p30 (predicted)","termid":"PBO:0000967"}


id: GO:0030335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell migration.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"positive regulation of cell motility","termid":"GO:2000147"},{"relation_name":"positively_regulates","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell migration","synonyms":[{"name":"activation of cell migration","type":"narrow"},{"name":"stimulation of cell migration","type":"narrow"},{"name":"up regulation of cell migration","type":"exact"},{"name":"up-regulation of cell migration","type":"exact"},{"name":"upregulation of cell migration","type":"exact"}],"termid":"GO:0030335"}


id: PBO:0088489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal export complex protein Arx1, peptidase family","termid":"PBO:0088489"}


id: GO:0010098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the suspensor over time, from its formation to the mature structure. The suspensor is the extension at the base of the embryo that anchors the embryo in the embryo sac and pushes it into the endosperm.","definition_xrefs":["ISBN:0471245208","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suspensor development","termid":"GO:0010098"}


id: PBO:0048943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi SNAP receptor complex member 1","termid":"PBO:0048943"}


id: PBO:0076234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 2","termid":"PBO:0076234"}


id: PBO:0108913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG2 cohesin complex component","termid":"PBO:0108913"}


id: GO:2000575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of microtubule motor activity.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of microtubule motor activity (obsolete GO:2000575)","synonyms":[{"name":"negative regulation of axonemal motor activity","type":"related"},{"name":"negative regulation of dynein","type":"related"},{"name":"negative regulation of dynein ATPase activity","type":"related"},{"name":"negative regulation of kinesin","type":"related"},{"name":"negative regulation of kinesin motor activity","type":"related"},{"name":"negative regulation of kinetochore motor activity","type":"related"}],"termid":"GO:2000575"}


id: PBO:0073259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 3","termid":"PBO:0073259"}


id: MONDO:0008874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bangstad syndrome is a rare endocrine disease characterized by the association of primordial birdheaded nanism, progressive ataxia, goiter, primary gonadal insufficiency and insulin resistant diabetes mellitus. Plasma concentrations of TSH, PTH, LH, FSH, ACTH, glucagon, and insulin are usually elevated. A generalized cell membrane defect was suggested to be the pathophysiological abnormality in these patients. The mode of inheritance was thought to be autosomal recessive. There have been no further descriptions in the literature since 1989.","definition_xrefs":["Orphanet:1227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bangstad syndrome","secondary_identifiers":["SCTID:237614004","MESH:C537902","MEDGEN:90978","GARD:812","OMIM:210740","UMLS:C0342284","ICD9:759.89"],"synonyms":[{"name":"Bangstad syndrome","type":"exact"},{"name":"Bird-headed dwarfism with progressive ataxia, insulin-resistant diabetes, goiter and primary gonadal insufficiency","type":"related"},{"name":"Bird-headed dwarfism with progressive ataxia, insulin-resistant diabetes, goiter, and primary gonadal insufficiency","type":"related"},{"name":"Bird-headed dwarfism with progressive ataxia, insulin-resistant diabetes, goitre and primary gonadal insufficiency","type":"related"},{"name":"ataxia-diabetes-goiter-gonadal insufficiency syndrome","type":"exact"}],"termid":"MONDO:0008874","xrefs":{"Monarch":{"xref_id":"0008874"}}}


id: GO:0003284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the septum primum over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum development","termid":"GO:0003283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"septum primum development","termid":"GO:0003284"}


id: RO:HOM0000004
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homoplasy that involves different underlying mechanisms or structures.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homoplasy_relationship_with","termid":"RO:HOM0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_convergence_relationship_with","synonyms":[{"name":"analogy","type":"related"}],"termid":"RO:HOM0000004"}


id: PBO:0018218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme import protein Shu1","termid":"PBO:0018218"}


id: GO:0009373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving pheromones that modulates the frequency, rate or extent of transcription.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription by pheromones (obsolete GO:0009373)","termid":"GO:0009373"}


id: FYPO:0004027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5' deoxyribonuclease (pyrimidine dimer) activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004027"}


id: MONDO:0003307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuroma","termid":"MONDO:0002173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple mucosal neuroma","secondary_identifiers":["MEDGEN:233722","UMLS:C1334828","NCIT:C6559","DOID:5155"],"synonyms":[{"name":"multiple mucosal neuromas","type":"related"}],"termid":"MONDO:0003307","xrefs":{"Monarch":{"xref_id":"0003307"}}}


id: FYPO:0001083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered polysaccharide level during vegetative growth","termid":"FYPO:0001085"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased polysaccharide level during vegetative growth","synonyms":[{"name":"increased cellular polysaccharide level during vegetative growth","type":"exact"},{"name":"increased polysaccharide accumulation during vegetative growth","type":"related"},{"name":"increased polysaccharide level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001083"}


id: PBO:0000621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid efflux transporter Atg22","termid":"PBO:0000621"}


id: GO:0007296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of yolk. Yolk is a mixture of materials used for embryonic nutrition.","definition_xrefs":["GOC:dph","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm organization","termid":"GO:0007028"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vitellogenesis","secondary_identifiers":["Wikipedia:Vitellogenesis"],"synonyms":[{"name":"yolk formation","type":"exact"},{"name":"yolk production","type":"exact"}],"termid":"GO:0007296"}


id: GO:0004973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-methyl-D-aspartate receptor-associated protein activity (obsolete GO:0004973)","synonyms":[{"name":"N-methyl-D-aspartate receptor-associated protein activity","type":"exact"}],"termid":"GO:0004973"}


id: PATO:0000823
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000823 quinine taste (obsolete PATO:0000823)","termid":"PATO:0000823"}


id: GO:1900293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of galactotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of galactotriose transport","termid":"GO:1900291"},{"relation_name":"positively_regulates","term_name":"galactotriose transport","termid":"GO:2001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of galactotriose transport","synonyms":[{"name":"activation of galactotriose transport","type":"narrow"},{"name":"up regulation of galactotriose transport","type":"exact"},{"name":"up-regulation of galactotriose transport","type":"exact"},{"name":"upregulation of galactotriose transport","type":"exact"}],"termid":"GO:1900293"}


id: FYPO:0004597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which DNA replication is initiated at one or more origins during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:11532929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"replication origin firing during mitotic G2 phase","synonyms":[{"name":"replication origin firing during G2 phase of mitotic cell cycle","type":"exact"},{"name":"replication origin firing during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004597"}


id: GO:0090516
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105758],"is_not":false,"summary":null,"term":"GO:0090516"}]},"cv_name":"biological_process","definition":"The directed movement of L-serine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine transport","termid":"GO:0015825"},{"relation_name":"is_a","term_name":"neutral amino acid transmembrane import into vacuole","termid":"GO:0034491"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-serine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090516","terms_by_termid":{"GO:0090516":null}}


id: PBO:0090718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome base subcomplex ATPase subunit Rpt3","termid":"PBO:0090718"}


id: GO:0015966
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98898],"is_not":false,"summary":null,"term":"GO:0015966"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diadenosine tetraphosphate, a derivative of the nucleoside adenosine with four phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate biosynthetic process","termid":"GO:0015960"},{"relation_name":"is_a","term_name":"diadenosine tetraphosphate metabolic process","termid":"GO:0015965"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"diadenosine tetraphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine tetraphosphate anabolism","type":"exact"},{"name":"diadenosine tetraphosphate biosynthesis","type":"exact"},{"name":"diadenosine tetraphosphate formation","type":"exact"},{"name":"diadenosine tetraphosphate synthesis","type":"exact"}],"termid":"GO:0015966","terms_by_termid":{"GO:0015966":null}}


id: FYPO:0008171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nuclear pore complexes are more clustered together than normal.","definition_xrefs":["PMID:35354597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased nuclear pore complex clustering","termid":"FYPO:0008171"}


id: MONDO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bursitis that involves the olecranon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enthesopathy","termid":"MONDO:0002183"},{"relation_name":"is_a","term_name":"bursitis","termid":"MONDO:0002471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olecranon bursitis","secondary_identifiers":["UMLS:C0263962","MEDGEN:538225","DOID:12581","ICD10CM:M70.2","ICD9:726.33","SCTID:425940002"],"synonyms":[{"name":"Miners' elbow","type":"exact"},{"name":"bursitis of elbow","type":"exact"},{"name":"bursitis of elbow region","type":"exact"},{"name":"bursitis of olecranon","type":"exact"},{"name":"capped elbow","type":"exact"},{"name":"elbow bursitis","type":"exact"},{"name":"elbow bursitis (& olecranon)","type":"exact"},{"name":"miner's elbow","type":"exact"},{"name":"olecranon bursitis","type":"exact"},{"name":"shoe boil","type":"exact"}],"termid":"MONDO:0001557","xrefs":{"Monarch":{"xref_id":"0001557"}}}


id: GO:0047063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ferricytochrome B5 + ascorbate = ferrocytochrome B5 + monodehydroascorbate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete L-ascorbate-cytochrome-b5 reductase activity (obsolete GO:0047063)","synonyms":[{"name":"L-ascorbate:ferricytochrome-b5 oxidoreductase activity","type":"related"},{"name":"ascorbate-cytochrome b5 reductase activity","type":"related"}],"termid":"GO:0047063"}


id: GO:0060960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a neuron of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardiac neuron differentiation","termid":"GO:0060945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neuron fate commitment","synonyms":[{"name":"heart neuron fate commitment","type":"exact"}],"termid":"GO:0060960"}


id: GO:1903958
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of nitric-oxide synthase activity.","definition_xrefs":["GOC:TermGenie","PMID:25417112","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nitric-oxide synthase complex","synonyms":[{"name":"iNOS-S100A8/A9 complex","type":"narrow"}],"termid":"GO:1903958"}


id: GO:0019446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of tyrosine into other compounds, including phosphoenolpyruvate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tyrosine catabolic process to phosphoenolpyruvate (obsolete GO:0019446)","synonyms":[{"name":"tyrosine breakdown to phosphoenolpyruvate","type":"exact"},{"name":"tyrosine degradation to phosphoenolpyruvate","type":"exact"}],"termid":"GO:0019446"}


id: MONDO:0007329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cirrhosis in which no causative agent can be identified.","definition_xrefs":["NCIT:C84411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"cirrhosis of liver","termid":"MONDO:0005155"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"cirrhosis, familial","secondary_identifiers":["MEDGEN:350049","OMIM:215600","UMLS:C1861556","SCTID:6183001","MESH:C566123"],"synonyms":[{"name":"Indian childhood cirrhosis","type":"related"},{"name":"Sen syndrome","type":"related"},{"name":"cirrhosis, Noncryptogenic, susceptibility to","type":"related"},{"name":"cirrhosis, cryptogenic","type":"related"},{"name":"cirrhosis, familial","type":"exact"},{"name":"cirrhosis, familial, with pulmonary hypertension","type":"related"},{"name":"copper toxicosis, idiopathic","type":"related"},{"name":"copper-overload cirrhosis","type":"related"},{"name":"cryptogenic cirrhosis","type":"exact"},{"name":"endemic Tyrolean infantile cirrhosis","type":"related"},{"name":"hereditary cirrhosis of liver","type":"exact"}],"termid":"MONDO:0007329","xrefs":{"Monarch":{"xref_id":"0007329"}}}


id: PBO:0072426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28","termid":"PBO:0072426"}


id: PBO:0029611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_tapered_cell","termid":"PBO:0029611"}


id: PBO:0090113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RagC/D GTPase Gtr2","termid":"PBO:0090113"}


id: PBO:0005234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Scw1","termid":"PBO:0005234"}


id: PBO:0012612
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papulacandin B resistance","termid":"PBO:0012612"}


id: PBO:0086722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; weak similarity with uridine kinases and with phosphoribokinases","termid":"PBO:0086722"}


id: PR:P04551
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal-type cyclin-dependent kinase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:P04551","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"CDK1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cdc2","type":"exact"},{"name":"cdk1","type":"related"},{"name":"cell division control protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cell division protein kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p34 protein kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi002, SPBC11B10.09","type":"related"},{"name":"swo2","type":"related"}],"termid":"PR:P04551"}


id: GO:0036083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of unsaturated fatty acid biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:9927444"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of unsaturated fatty acid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0036083)","termid":"GO:0036083"}


id: GO:0009745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of sucrose.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar mediated signaling pathway","termid":"GO:0010182"},{"relation_name":"part_of","term_name":"cellular response to sucrose stimulus","termid":"GO:0071329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sucrose mediated signaling","synonyms":[{"name":"sucrose mediated signalling","type":"exact"}],"termid":"GO:0009745"}


id: GO:0006406
data:
  {"annotated_genes":["SJAG_01652","SJAG_01715","SJAG_02209","SJAG_04721","SJAG_03693","SJAG_01529","SJAG_00992","SJAG_04536","SJAG_03847","SJAG_04017","SJAG_04360","SJAG_01065","SJAG_02534","SJAG_00093","SJAG_00471","SJAG_03986","SJAG_00641","SJAG_04589","SJAG_03300","SJAG_02704","SJAG_04202","SJAG_04148","SJAG_04379","SJAG_04480","SJAG_04115","SJAG_04310","SJAG_04472","SJAG_04645","SJAG_00375","SJAG_04656","SJAG_01584","SJAG_01185","SJAG_01374","SJAG_04347","SJAG_01449","SJAG_01083","SJAG_03002","SJAG_05328","SJAG_03283","SJAG_00178","SJAG_00298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61639,63228,74489,74573,75853,78469,79300,82009,91329,103064,119274],"is_not":false,"summary":null,"term":"GO:0006406"},{"annotations":[74957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[79116,118056,75528,113731,117804,98426,103312,118316,74803,77467,112401,71648,94053,104569,76240,73150,98840,120958,105866,82233,116458,74956,75913,120039,113103,76486,109586,76144,111830,103780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of mRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"is_a","term_name":"mRNA transport","termid":"GO:0051028"},{"relation_name":"part_of","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03283":null,"SJAG_03300":null,"SJAG_03693":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810","GO:0051179","GO:0010467"],"is_obsolete":false,"name":"mRNA export from nucleus","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-72202"],"synonyms":[{"name":"mRNA export from cell nucleus","type":"exact"},{"name":"mRNA export out of nucleus","type":"exact"},{"name":"mRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"mRNA-nucleus export","type":"exact"}],"termid":"GO:0006406","terms_by_termid":{"GO:0006406":null,"GO:0016973":null,"GO:0031990":null}}


id: PBO:0077652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 1A","termid":"PBO:0077652"}


id: MONDO:0006685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by a reduction of oxygen in the blood combined with reduced blood flow (ischemia) to the brain from a localized obstruction of a cerebral artery or from systemic hypoperfusion. Prolonged hypoxia-ischemia is associated with ischemic attack, transient; brain infarction; brain edema; coma; and other conditions.","definition_xrefs":["MESH:D020925"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"brain ischemia","termid":"MONDO:0005299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain hypoxia - ischemia","secondary_identifiers":["MEDGEN:199862","UMLS:C0752308"],"termid":"MONDO:0006685","xrefs":{"Monarch":{"xref_id":"0006685"}}}


id: PBO:0056959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 20b","termid":"PBO:0056959"}


id: PBO:0060117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 18","termid":"PBO:0060117"}


id: GO:0048726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the labrum over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labrum development","termid":"GO:0048726"}


id: PBO:0030890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_response_phenotype_during_vegetative_growth","termid":"PBO:0030890"}


id: PBO:0054264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1649","termid":"PBO:0054264"}


id: MONDO:0958236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ullrich congenital muscular dystrophy","termid":"MONDO:0000355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"Ullrich congenital muscular dystrophy 1C","secondary_identifiers":["OMIM:620728","UMLS:C5935583","DOID:0060943","MEDGEN:1862699"],"termid":"MONDO:0958236","xrefs":{"Monarch":{"xref_id":"0958236"}}}


id: PBO:0049953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible factor 3 subunit alpha","termid":"PBO:0049953"}


id: PR:Q9P6J3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trehalose-6-phosphate hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02339","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase Mal1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.07","secondary_identifiers":["UniProtKB:Q9P6J3"],"synonyms":[{"name":"SPBC1683.07","type":"related"},{"name":"Spom972h-treC","type":"exact"},{"name":"maltase (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:Q9P6J3"}


id: GO:0035882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rhythmic process of defecation that consists of an intestinal oscillator which regulates calcium waves. These waves in turn control a stereotypical, three-part pattern of muscle contractions. In some organisms, defecation can recur with a regularity more frequent than every 24 hours. For example, in a well-fed Caenorhabditis elegans, the defecation motor program occurs approximately every 45 seconds, and is temperature- and touch-compensated.","definition_xrefs":["PMID:8158250","GOC:bf","GOC:kmv","PMID:9066270","PMID:7479775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ultradian rhythm","termid":"GO:0007624"},{"relation_name":"part_of","term_name":"defecation","termid":"GO:0030421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defecation rhythm","synonyms":[{"name":"DMP","type":"exact"},{"name":"defecation behavior","type":"related"},{"name":"defecation cycle","type":"exact"},{"name":"defecation motor program","type":"exact"}],"termid":"GO:0035882"}


id: FYPO:0003616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to fluphenazine. Cells stop growing (and may die) at a concentration of fluphenazine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to fluphenazine","synonyms":[{"name":"hypersensitive to fluphenazine","type":"exact"},{"name":"sensitive to fluphenazine during mitotic cell cycle","type":"related"},{"name":"sensitive to fluphenazine during vegetative growth","type":"exact"}],"termid":"FYPO:0003616"}


id: GO:1901527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any abscisic acid mediated signaling pathway that is involved in stomatal movement.","definition_xrefs":["GOC:TermGenie","PMID:22730405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid-activated signaling pathway","termid":"GO:0009738"},{"relation_name":"part_of","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"abscisic acid-activated signaling pathway involved in stomatal movement","synonyms":[{"name":"abscisic acid mediated signaling pathway involved in stomatal movement","type":"related"},{"name":"abscisic acid mediated signalling involved in stomatal movement","type":"exact"}],"termid":"GO:1901527"}


id: MONDO:0006241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granuloma located in the liver.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatic granuloma","secondary_identifiers":["EFO:1000291","SCTID:714253009","ICD9:572.8","MEDGEN:155428","UMLS:C0745754"],"termid":"MONDO:0006241","xrefs":{"Monarch":{"xref_id":"0006241"}}}


id: GO:0060516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size of the prostatic bud as it forms.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"is_a","term_name":"prostate gland morphogenetic growth","termid":"GO:0060737"},{"relation_name":"is_a","term_name":"prostate gland epithelium morphogenesis","termid":"GO:0060740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary prostatic bud elongation","synonyms":[{"name":"prostate bud elongation","type":"broad"},{"name":"prostate bud elongation involved in prostate morphogenesis","type":"exact"}],"termid":"GO:0060516"}


id: PBO:0090653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor GTPase Guf1","termid":"PBO:0090653"}


id: MONDO:0008590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any essential tremor in which the cause of the disease is a mutation in the DRD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 1","secondary_identifiers":["OMIM:190300","UMLS:C1860861","DOID:0111428","MEDGEN:349909","MESH:C536545"],"synonyms":[{"name":"DRD3 essential tremor","type":"exact"},{"name":"ETM1","type":"related"},{"name":"FET1","type":"related"},{"name":"essential tremor caused by mutation in DRD3","type":"exact"},{"name":"essential tremor, hereditary, 1","type":"exact"},{"name":"tremor familial essential, 1","type":"related"},{"name":"tremor hereditary essential, 1","type":"related"},{"name":"tremor, familial essential, 1","type":"related"},{"name":"tremor, hereditary essential, 1","type":"exact"},{"name":"tremor, hereditary essential, type 1","type":"exact"}],"termid":"MONDO:0008590","xrefs":{"Monarch":{"xref_id":"0008590"}}}


id: PBO:0054768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2180","termid":"PBO:0054768"}


id: MONDO:0020641
data:
  {"annotated_genes":["SJAG_04114","SJAG_03453","SJAG_03689","SJAG_00229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88639,89170,88638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[88184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm involving the respiratory tract.","definition_xrefs":["NCIT:C3355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_04114":null},"genotype_count":0,"is_obsolete":false,"name":"respiratory tract neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:126667002","EFO:0003853","MEDGEN:11200","MESH:D012142","UMLS:C0035244","ICD10CM:C30-C39"],"synonyms":[{"name":"neoplasm of respiratory tract","type":"exact"},{"name":"neoplasm of the respiratory tract","type":"exact"},{"name":"neoplasm, respiratory tract","type":"exact"},{"name":"neoplasms, respiratory tract","type":"exact"},{"name":"respiratory system neoplasm","type":"exact"},{"name":"respiratory tract neoplasm","type":"exact"},{"name":"respiratory tract tumor","type":"exact"},{"name":"respiratory tract tumour","type":"exact"},{"name":"tract neoplasm, respiratory","type":"exact"},{"name":"tract neoplasms, respiratory","type":"exact"},{"name":"tumor of respiratory tract","type":"exact"},{"name":"tumor of the respiratory tract","type":"exact"},{"name":"tumour of respiratory tract","type":"exact"},{"name":"tumour of the respiratory tract","type":"exact"}],"termid":"MONDO:0020641","terms_by_termid":{"MONDO:0008903":null,"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0020641"}}}


id: MONDO:0008630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary bladder, atony of","secondary_identifiers":["UMLS:C5231389","MEDGEN:1684829","OMIM:191800"],"synonyms":[{"name":"atony of urinary bladder","type":"exact"},{"name":"bladder dysfunction, autonomic, with impaired pupillary reflex and secondary CAKUT","type":"exact"},{"name":"urinary bladder, atony of","type":"exact"}],"termid":"MONDO:0008630","xrefs":{"Monarch":{"xref_id":"0008630"}}}


id: MONDO:0022407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal ciliopathy due to mutation in Bardet-Biedl gene (obsolete MONDO:0022407)","secondary_identifiers":["Orphanet:156183"],"termid":"MONDO:0022407","xrefs":{"Monarch":{"xref_id":"0022407"}}}


id: PBO:0081598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 4","termid":"PBO:0081598"}


id: GO:0045616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of keratinocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"regulates","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of keratinocyte differentiation","secondary_identifiers":["Reactome:R-HSA-8939242"],"termid":"GO:0045616"}


id: PBO:0047804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box K1","termid":"PBO:0047804"}


id: PBO:0013777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mst2/NuA4 histone acetyltransferase complex subunit Eaf6","termid":"PBO:0013777"}


id: MONDO:0017104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central nervous system cystic malformation (obsolete MONDO:0017104)","secondary_identifiers":["Orphanet:269194"],"termid":"MONDO:0017104","xrefs":{"Monarch":{"xref_id":"0017104"}}}


id: MONDO:0007909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial multiple lipomatosis is a rare, benign, genetic skin disease characterized by numerous, painless, encapsulated lipomas located in the subcutaneous adipose tissue of the trunk and extremities, with relative sparing of the neck and shoulders. Association with gastroduodenal lipomatosis, brain anomalies or lipomatosis, and refractory epilepsy has been reported.","definition_xrefs":["Orphanet:199276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial multiple lipomatosis","secondary_identifiers":["GARD:12925","ICD9:214.8","MEDGEN:698553","UMLS:C1275273","ICD9:214.9","OMIM:151900","SCTID:766888002","MESH:D000071070","DOID:0070518"],"synonyms":[{"name":"lipoma","type":"related"},{"name":"lipomatosis, familial multiple","type":"related"},{"name":"lipomatosis, multiple","type":"related"}],"termid":"MONDO:0007909","xrefs":{"Monarch":{"xref_id":"0007909"}}}


id: PBO:0048366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAPDH pseudogene 77","termid":"PBO:0048366"}


id: FYPO:0006440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein kinase activity is absent during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein kinase activity during cellular response to HU","type":"exact"},{"name":"protein kinase activity abolished during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006440"}


id: PBO:0070850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 2","termid":"PBO:0070850"}


id: PBO:0041340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 putative open reading frame 36","termid":"PBO:0041340"}


id: GO:0047181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzoyl-CoA + 3 malonyl-CoA = 3 CO2 + 2,3',4,6-tetrahydroxybenzophenone + 4 coenzyme A.","definition_xrefs":["EC:2.3.1.151","MetaCyc:2.3.1.151-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tetrahydroxybenzophenone synthase activity","secondary_identifiers":["RHEA:19305"],"synonyms":[{"name":"malonyl-CoA:3-hydroxybenzoyl-CoA malonyltransferase activity","type":"related"}],"termid":"GO:0047181"}


id: MONDO:0001393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"focal chorioretinitis","termid":"MONDO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"peripheral focal chorioretinitis","secondary_identifiers":["ICD9:363.04","MEDGEN:573121","SCTID:56787009","UMLS:C0339394","DOID:11864"],"termid":"MONDO:0001393","xrefs":{"Monarch":{"xref_id":"0001393"}}}


id: GO:0016247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a channel. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter regulator activity","termid":"GO:0141108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"channel regulator activity","termid":"GO:0016247"}


id: GO:0035750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained in, the abaxonal region of the myelin sheath. The abaxonal region is the region of the myelin sheath furthest from the axon.","definition_xrefs":["PMID:20237282","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to myelin sheath abaxonal region","synonyms":[{"name":"protein localisation to myelin sheath abaxonal region","type":"exact"}],"termid":"GO:0035750"}


id: PBO:0113163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inhibitor of Las17p-mediated Arp2/3 complex activation; F-BAR protein that directly inhibits Las17p stimulation of Arp2/3 complex-mediated actin assembly in vitro; involved in formation of the endocytic site; intrinsically disordered domain induces bundling of Cdc11p-capped septin filaments to promote septin collar assembly, similar to mammalian ortholog FCHo2; localizes to sites of polarized growth, the septin ring, and endocytic patches; involved in actin cytoskeletal organization","termid":"PBO:0113163"}


id: FYPO:0003050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type). Synapsis is the process in which the side by side pairing and physical juxtaposition of homologous chromosomes is established and maintained. Pairing may be assayed globally or at one or more specific loci.","definition_xrefs":["GO:0007129","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal homologous chromosome pairing","synonyms":[{"name":"normal homologous chromosome pairing at meiosis","type":"exact"},{"name":"normal synapsis","type":"exact"}],"termid":"FYPO:0003050"}


id: GO:0009298
data:
  {"annotated_genes":["SJAG_00890","SJAG_02783","SJAG_03188","SJAG_02648"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69858,77210,79786,105009],"is_not":false,"summary":null,"term":"GO:0009298"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-mannose metabolic process","termid":"GO:0019673"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"GDP-mannose biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446205"],"synonyms":[{"name":"GDP-mannose anabolism","type":"exact"},{"name":"GDP-mannose biosynthesis","type":"exact"},{"name":"GDP-mannose formation","type":"exact"},{"name":"GDP-mannose synthesis","type":"exact"}],"termid":"GO:0009298","terms_by_termid":{"GO:0009298":null}}


id: PBO:0084520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of Hsp110 subclass of the heat shock protein 70 (HSP70) family; serves as nucleotide exchange factor to load ATP onto the SSA class of cytosolic Hsp70s; may be involved in protein folding; localized to the cytoplasm; SSE2 has a paralog, SSE1, that arose from the whole genome duplication","termid":"PBO:0084520"}


id: GO:0005192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete urinary protein (obsolete GO:0005192)","synonyms":[{"name":"urinary protein","type":"exact"}],"termid":"GO:0005192"}


id: PBO:0005019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) cytochrome b subunit (predicted)","termid":"PBO:0005019"}


id: MOD:00509
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:6273432","Unimod:141","PubMed:12643539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidination of lysines or N-terminal amines with methyl acetimidate","synonyms":[{"name":"Amidine","type":"related"},{"name":"amidination of lysines or N-terminal amines with methyl acetimidate","type":"related"}],"termid":"MOD:00509"}


id: MONDO:0006136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical endometrioid adenocarcinoma (obsolete MONDO:0006136)","termid":"MONDO:0006136","xrefs":{"Monarch":{"xref_id":"0006136"}}}


id: PBO:0050208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 25","termid":"PBO:0050208"}


id: MONDO:0009587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoaxial hexadactyly and cardiac malformation","secondary_identifiers":["MEDGEN:167099","OMIM:249670","MESH:C563087","UMLS:C0796057"],"synonyms":[{"name":"Mexican Cardiomelic dysplasia","type":"related"},{"name":"mesoaxial hexadactyly and cardiac malformation","type":"exact"}],"termid":"MONDO:0009587","xrefs":{"Monarch":{"xref_id":"0009587"}}}


id: GO:0002478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC protein complex. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous antigen","termid":"GO:0019884"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen","synonyms":[{"name":"exogenous peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0002478"}


id: FYPO:0005334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the Holliday junctions is greater than normal. A Holliday junction is a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices.","definition_xrefs":["PomBase:mah","GO:0000400","PMID:15367656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Holliday junctions","synonyms":[{"name":"increased amount of X-shaped DNA","type":"related"},{"name":"increased number of Holliday junctions during mitotic cell cycle","type":"related"},{"name":"increased number of Holliday junctions during vegetative growth","type":"exact"},{"name":"increased number of four-way junctions","type":"exact"}],"termid":"FYPO:0005334"}


id: GO:0004430
data:
  {"annotated_genes":["SJAG_05330","SJAG_04537","SJAG_01571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73545,78299,95088],"is_not":false,"summary":null,"term":"GO:0004430"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol + ATP = a 1-phosphatidyl-1D-myo-inositol 4-phosphate + ADP + H+.","definition_xrefs":["EC:2.7.1.67","RHEA:19877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01571":null,"SJAG_04537":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1675780","Reactome:R-HSA-1675813","KEGG_REACTION:R03361","MetaCyc:1-PHOSPHATIDYLINOSITOL-KINASE-RXN","Reactome:R-HSA-1675883","Reactome:R-HSA-1676185","Reactome:R-HSA-1675974"],"synonyms":[{"name":"PI 4-kinase activity","type":"exact"},{"name":"PI kinase activity","type":"broad"},{"name":"PI4-kinase activity","type":"exact"},{"name":"PI4K","type":"exact"},{"name":"PI4K-alpha activity","type":"exact"},{"name":"PtdIns-4-kinase activity","type":"exact"},{"name":"phosphatidylinositol 4-kinase activity","type":"exact"},{"name":"phosphatidylinositol kinase (phosphorylating) activity","type":"broad"},{"name":"phosphatidylinositol kinase activity","type":"broad"},{"name":"type II phosphatidylinositol kinase activity","type":"related"}],"termid":"GO:0004430","terms_by_termid":{"GO:0004430":null}}


id: PBO:0062276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 7 pseudogene","termid":"PBO:0062276"}


id: MONDO:0009109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lysinuric protein intolerance (LPI) is a very rare inherited multisystem condition caused by disturbance in amino acid metabolism.","definition_xrefs":["Orphanet:470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"lysinuric protein intolerance","secondary_identifiers":["DOID:0060439","NCIT:C121563","OMIM:222700","UMLS:C0268647","SCTID:303852004","MESH:C562687","ICD9:270.8","GARD:3335","icd11.foundation:972050440","MedDRA:10058300","NANDO:1200809","NANDO:2200488","MEDGEN:75704"],"synonyms":[{"name":"Dibasicamino aciduria II","type":"related"},{"name":"LPI","type":"exact"},{"name":"dibasic amino aciduria 2","type":"related"},{"name":"dibasic amino aciduria II","type":"exact"},{"name":"dibasic aminoaciduria 2","type":"related"},{"name":"hyperdibasic aminoaciduria","type":"exact"},{"name":"hyperdibasic aminoaciduria type 2","type":"exact"},{"name":"lysinuric PROTEIN intolerance","type":"related"},{"name":"lysinuric protein intolerance","type":"exact"}],"termid":"MONDO:0009109","xrefs":{"Monarch":{"xref_id":"0009109"}}}


id: GO:0021650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the vestibulocochlear nerve. This process pertains to the initial formation of a structure from unspecified parts. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GO_REF:0000021","GOC:dph","ISBN:0838580343","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve morphogenesis","termid":"GO:0021648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve formation","synonyms":[{"name":"CN VII formation","type":"related"}],"termid":"GO:0021650"}


id: PR:O13767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A5.05c gene.","definition_xrefs":["UniProtKB:O13767","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A5.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.05c","synonyms":[{"name":"Spom972h-SPAC17A5.05c","type":"exact"}],"termid":"PR:O13767"}


id: PBO:0083467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NOP4/YPL043W","termid":"PBO:0083467"}


id: FYPO:0002791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small vacuoles during stationary phase","termid":"FYPO:0002789"},{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"},{"relation_name":"is_a","term_name":"small vacuoles during stationary phase","termid":"FYPO:0002789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during stationary phase","synonyms":[{"name":"fragmented vacuoles during stationary phase","type":"related"},{"name":"small vacuoles present in greater numbers during stationary phase","type":"exact"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during stationary phase","type":"exact"}],"termid":"FYPO:0002791"}


id: MONDO:0044870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of torsion dystonia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"torsion dystonia","termid":"MONDO:0044843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"acquired torsion dystonia","secondary_identifiers":["MEDGEN:739598","SCTID:433493000","UMLS:C1719382"],"synonyms":[{"name":"acquired torsion dystonia","type":"exact"}],"termid":"MONDO:0044870","xrefs":{"Monarch":{"xref_id":"0044870"}}}


id: PBO:0018214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor, glutathione S-transferase (predicted)","termid":"PBO:0018214"}


id: PBO:0083032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta-1-pyrroline-5-carboxylate dehydrogenase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; deficiency of human homolog ALDH4A1 causes type II hyperprolinemia (HPII), an autosomal recessive inborn error of metabolism; human homolog ALDH4A1 can complement yeast null mutant","termid":"PBO:0083032"}


id: PR:Q9HFE6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop8 gene.","definition_xrefs":["UniProtKB:Q9HFE6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein P16F5.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.06","synonyms":[{"name":"Spom972h-nop8","type":"exact"}],"termid":"PR:Q9HFE6"}


id: GO:1905715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cornification.","definition_xrefs":["PMID:26014679","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cornification","termid":"GO:1905715"}


id: GO:0052346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont nitric oxide production (obsolete GO:0052346)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont NO production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052346"}


id: GO:0004519
data:
  {"annotated_genes":["SJAG_01979","SJAG_01648","SJAG_01623","SJAG_01551","SJAG_06613","SJAG_01433","SJAG_01471","SJAG_03425","SJAG_MIT06","SJAG_03994","SJAG_04752","SJAG_01948","SJAG_02031","SJAG_02298","SJAG_02553","SJAG_03962","SJAG_00754","SJAG_02039","SJAG_03539","SJAG_02374","SJAG_05237","SJAG_03234","SJAG_00623","SJAG_02790","SJAG_03952","SJAG_05373","SJAG_00306","SJAG_02828","SJAG_00772","SJAG_01260","SJAG_01044","SJAG_01173","SJAG_04006","SJAG_01262","SJAG_04916","SJAG_04091","SJAG_02556","SJAG_03665","SJAG_03675","SJAG_04527","SJAG_02708","SJAG_04019","SJAG_03796","SJAG_04519","SJAG_04907","SJAG_03328","SJAG_01581","SJAG_01463","SJAG_04198","SJAG_01569","SJAG_03689","SJAG_00955","SJAG_04183","SJAG_01884","SJAG_01832","SJAG_MIT05","SJAG_03724","SJAG_06022","SJAG_02621","SJAG_04587","SJAG_00400","SJAG_MIT07","SJAG_02156","SJAG_04885","SJAG_04582","SJAG_01476","SJAG_02547","SJAG_01936","SJAG_04435","SJAG_00997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65678,68883,75569,89964,102202,121072,121080,121081],"is_not":false,"summary":null,"term":"GO:0004519"},{"annotations":[120800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990599"},{"annotations":[76119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[82215,71824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042781"},{"annotations":[106085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990601"},{"annotations":[77382,73036,80275,67760,76340,74546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"},{"annotations":[66662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140078"},{"annotations":[80356,81116,59944,96614,103087,76115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"},{"annotations":[107889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033892"},{"annotations":[81719,74966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003906"},{"annotations":[103089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"},{"annotations":[120119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070551"},{"annotations":[93561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990174"},{"annotations":[75328,78482,60935,69238,60023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004525"},{"annotations":[72983,117310,106712,120627,107603,106493,107604,117397,96587,115484,98394,98683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000171"},{"annotations":[96588,106494,64512,60961,72981,98684,103974,117311,70156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[73637,68059,64574,74255,78656,71747,109421,110972,81138,118334,114912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004521"},{"annotations":[78177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016891"},{"annotations":[78875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008419"},{"annotations":[82055,90137,104871,77761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004523"},{"annotations":[81208,112009,73638,112802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000014"},{"annotations":[73225,80774,119692,74675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of ester linkages within nucleic acids by creating internal breaks.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"}],"gene_count":70,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00400":null,"SJAG_00623":null,"SJAG_00754":null,"SJAG_00772":null,"SJAG_00955":null,"SJAG_00997":null,"SJAG_01044":null,"SJAG_01173":null,"SJAG_01260":null,"SJAG_01262":null,"SJAG_01433":null,"SJAG_01463":null,"SJAG_01471":null,"SJAG_01476":null,"SJAG_01551":null,"SJAG_01569":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_01884":null,"SJAG_01936":null,"SJAG_01948":null,"SJAG_01979":null,"SJAG_02031":null,"SJAG_02039":null,"SJAG_02156":null,"SJAG_02298":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02556":null,"SJAG_02621":null,"SJAG_02708":null,"SJAG_02790":null,"SJAG_02828":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03425":null,"SJAG_03539":null,"SJAG_03665":null,"SJAG_03675":null,"SJAG_03689":null,"SJAG_03724":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_03962":null,"SJAG_03994":null,"SJAG_04006":null,"SJAG_04019":null,"SJAG_04091":null,"SJAG_04183":null,"SJAG_04198":null,"SJAG_04435":null,"SJAG_04519":null,"SJAG_04527":null,"SJAG_04582":null,"SJAG_04587":null,"SJAG_04752":null,"SJAG_04885":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_05237":null,"SJAG_05373":null,"SJAG_06022":null,"SJAG_06613":null,"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824"],"is_obsolete":false,"name":"endonuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5358512","Reactome:R-HSA-5690990","Reactome:R-HSA-5358518","Reactome:R-HSA-5693533","Reactome:R-HSA-72180"],"termid":"GO:0004519","terms_by_termid":{"GO:0000014":null,"GO:0000171":null,"GO:0000213":null,"GO:0003906":null,"GO:0004519":null,"GO:0004521":null,"GO:0004523":null,"GO:0004525":null,"GO:0004526":null,"GO:0008419":null,"GO:0008821":null,"GO:0016891":null,"GO:0017108":null,"GO:0033892":null,"GO:0042781":null,"GO:0048257":null,"GO:0070551":null,"GO:0106332":null,"GO:0140078":null,"GO:1990174":null,"GO:1990599":null,"GO:1990601":null}}


id: GO:1904939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:BHF","GOC:bc","GOC:BHF_miRNA","PMID:23575307"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904939)","synonyms":[{"name":"regulation of TdT","type":"related"},{"name":"regulation of addase activity","type":"exact"},{"name":"regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"regulation of terminal addition enzyme activity","type":"related"},{"name":"regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"regulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904939"}


id: MONDO:0011100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, retinitis pigmentosa, and sutural cataract","secondary_identifiers":["OMIM:601537","MEDGEN:316936","UMLS:C1832214","MESH:C563296"],"synonyms":[{"name":"microcephaly, retinitis pigmentosa, and sutural cataract","type":"exact"}],"termid":"MONDO:0011100","xrefs":{"Monarch":{"xref_id":"0011100"}}}


id: GO:0090256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"},{"relation_name":"regulates","term_name":"cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090256"}


id: MONDO:0003544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the spinal cord. Representative examples include lymphoma, melanoma, and sarcoma.","definition_xrefs":["NCIT:C3572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spinal cord cancer","secondary_identifiers":["ICD9:192.2","MEDGEN:56317","ICD10CM:C72.0","DOID:5612","SCTID:363475005","UMLS:C0153646"],"synonyms":[{"name":"cancer of spinal cord","type":"exact"},{"name":"intraspinal tumor","type":"broad"},{"name":"intraspinal tumour","type":"broad"},{"name":"malignant neoplasm of spinal cord","type":"exact"},{"name":"malignant neoplasm of the spinal cord","type":"exact"},{"name":"malignant spinal cord neoplasm","type":"exact"},{"name":"malignant spinal cord tumor","type":"exact"},{"name":"malignant spinal cord tumour","type":"exact"},{"name":"malignant tumor of spinal cord","type":"exact"},{"name":"malignant tumor of the spinal cord","type":"exact"},{"name":"malignant tumour of spinal cord","type":"exact"},{"name":"malignant tumour of the spinal cord","type":"exact"},{"name":"spinal cancer","type":"exact"},{"name":"spinal cord cancer","type":"exact"},{"name":"spinal cord neoplasm","type":"broad"},{"name":"spinal neoplasm","type":"related"},{"name":"spine cancer","type":"exact"},{"name":"tumor of the spinal cord","type":"broad"},{"name":"tumour of the spinal cord","type":"broad"}],"termid":"MONDO:0003544","xrefs":{"Monarch":{"xref_id":"0003544"}}}


id: GO:1903403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renal phosphate excretion.","definition_xrefs":["GOC:pm","GO_REF:0000058","GOC:TermGenie","PMID:8700837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of renal phosphate excretion","termid":"GO:1903402"},{"relation_name":"negatively_regulates","term_name":"renal phosphate excretion","termid":"GO:0044722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal phosphate excretion","synonyms":[{"name":"down regulation of renal phosphate excretion","type":"exact"},{"name":"down regulation of renal phosphate ion excretion","type":"exact"},{"name":"down-regulation of renal phosphate excretion","type":"exact"},{"name":"down-regulation of renal phosphate ion excretion","type":"exact"},{"name":"downregulation of renal phosphate excretion","type":"exact"},{"name":"downregulation of renal phosphate ion excretion","type":"exact"},{"name":"inhibition of renal phosphate excretion","type":"narrow"},{"name":"inhibition of renal phosphate ion excretion","type":"narrow"},{"name":"negative regulation of renal phosphate ion excretion","type":"exact"}],"termid":"GO:1903403"}


id: PBO:0088811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Sft2","termid":"PBO:0088811"}


id: GO:0018645
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propene + NADH + H+ + O2 = 1,2-epoxypropane + NAD+ + H2O.","definition_xrefs":["EC:1.14.13.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alkene monooxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:r0856","MetaCyc:1.14.13.69-RXN","RHEA:11792","UM-BBD_enzymeID:r0857"],"synonyms":[{"name":"alkene epoxygenase activity","type":"related"},{"name":"alkene,NADH:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0018645"}


id: GO:0102704
data:
  {"annotated_genes":["SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61357],"is_not":false,"summary":null,"term":"GO:0102704"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose(2-) + a (mannosyl)2-(N-acetylglucosaminyl)2-diphosphodolichol = H+ + GDP(3-) + a (mannosyl)3-(N-acetylglucosaminyl)2-diphosphodolichol.","definition_xrefs":["GOC:pz","EC:2.4.1.257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid 1,6-alpha-mannosyltransferase activity","termid":"GO:0033164"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03056":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"GDP-Man:Man2GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["RHEA:29519","MetaCyc:RXN-5463"],"termid":"GO:0102704","terms_by_termid":{"GO:0102704":null}}


id: PBO:0039338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, placental","termid":"PBO:0039338"}


id: GO:0005050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome receptor (obsolete GO:0005050)","synonyms":[{"name":"peroxisome receptor","type":"exact"}],"termid":"GO:0005050"}


id: GO:0097601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retina homeostatic process preventing the degeneration of a retina blood vessel.","definition_xrefs":["GOC:jh2","PMID:23093773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina homeostasis","termid":"GO:0001895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina blood vessel maintenance","synonyms":[{"name":"maintenance of choriocapillaris","type":"narrow"},{"name":"maintenance of retina blood vessel","type":"exact"},{"name":"maintenance of retinal blood vessel","type":"exact"}],"termid":"GO:0097601"}


id: PBO:0074356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC3 pseudogene 1","termid":"PBO:0074356"}


id: MOD:01047
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to a monohydroxylated lysine.","definition_xrefs":["DeltaMass:168","OMSSA:60","Unimod:35#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated lysine","termid":"MOD:00681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated lysine","synonyms":[{"name":"Hy1Lys","type":"exact"},{"name":"Hydroxy Lysyl (-Hyl-)","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"hydroxylationk","type":"exact"}],"termid":"MOD:01047"}


id: PBO:0043839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 2","termid":"PBO:0043839"}


id: GO:0034133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 1 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 1 signaling pathway","termid":"GO:0034131"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 1 signaling pathway","termid":"GO:0034130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 1 signaling pathway","synonyms":[{"name":"positive regulation of TLR1 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034133"}


id: PBO:0117207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfite efflux transmembrane transporter Ssu2","termid":"PBO:0117207"}


id: PBO:0060454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAGPA antisense RNA 1","termid":"PBO:0060454"}


id: MOD:01391
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-valine residue, and C-5 methoxymethylates to form L-valine 5-(methoxymethyl)thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:10625477","PubMed:7844053","RESID:AA0468","PubMed:1880060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-valine 5-(methoxymethyl)thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-methylpropyl]-5-(methoxymethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-methylpropyl]-5-(methoxymethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-(methoxymethyl)thiazole-4-carboxylic acid (Val-Cys)","type":"exact"},{"name":"L-valine 5-(methoxymethyl)thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01391"}


id: PBO:0084838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit","termid":"PBO:0084838"}


id: GO:0010085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the establishment of polarity along the proximal/distal axis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"proximal/distal axis specification","termid":"GO:0009946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polarity specification of proximal/distal axis","termid":"GO:0010085"}


id: GO:0047596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-methylsalicylate + H+ = 3-cresol + CO2.","definition_xrefs":["RHEA:23112","EC:4.1.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"6-methylsalicylate decarboxylase activity","secondary_identifiers":["MetaCyc:6-METHYLSALICYLATE-DECARBOXYLASE-RXN","KEGG_REACTION:R03567"],"synonyms":[{"name":"6-MSA decarboxylase activity","type":"related"},{"name":"6-methylsalicylate carboxy-lyase (3-cresol-forming)","type":"related"},{"name":"6-methylsalicylate carboxy-lyase activity","type":"related"},{"name":"6-methylsalicylic acid (2,6-cresotic acid) decarboxylase activity","type":"related"}],"termid":"GO:0047596"}


id: PBO:0053850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1119","termid":"PBO:0053850"}


id: PBO:0032740
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, uncharacterized","termid":"PBO:0032740"}


id: PBO:0036382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl3, DIPSY family","termid":"PBO:0036382"}


id: PBO:0013474
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses wee1delta sensitivity to UV and hydroxyurea","termid":"PBO:0013474"}


id: PBO:0054017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1347","termid":"PBO:0054017"}


id: PBO:0074844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 36A","termid":"PBO:0074844"}


id: MONDO:1010581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in bongo.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, bongo","secondary_identifiers":["OMIA:000424-69297"],"termid":"MONDO:1010581","xrefs":{"Monarch":{"xref_id":"1010581"}}}


id: PBO:0047489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin reductase","termid":"PBO:0047489"}


id: FYPO:0000062
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121285,121287,121187,121280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003779"},{"annotations":[121492,121496,121489,121504,121488,121501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001556"},{"annotations":[121381],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal nuclear morphology","termid":"FYPO:0002256"},{"relation_name":"output_of","term_name":"abnormal nucleus organization","termid":"FYPO:0000810"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03940":null,"SJAG_04464":null},"genotype_count":11,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002403","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nuclear morphology during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null},"secondary_identifiers":["FYPO:0000259"],"single_locus_annotated_genes":["SJAG_03940","SJAG_03449","SJAG_01745","SJAG_01906","SJAG_02763","SJAG_04464"],"single_locus_genotype_uniquenames":["ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","lem2delta","nem2delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","ned1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta"],"synonyms":[{"name":"abnormal nuclear morphology during mitotic cell cycle","type":"related"},{"name":"deformed nucleus during vegetative growth","type":"exact"},{"name":"nuclear morphology defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000062","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO_EXT:0000001":null}}


id: PBO:0054531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1931","termid":"PBO:0054531"}


id: MONDO:0003257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low-grade neoplasm that arises from the neurohypophysis. It includes the granular cell tumor of the neurohypophysis and pituicytoma.","definition_xrefs":["NCIT:C7157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"neuroendocrine disorder","termid":"MONDO:0100070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior pituitary gland neoplasm","secondary_identifiers":["MEDGEN:235368","UMLS:C1334957","DOID:5048"],"synonyms":[{"name":"Neurohypophysis neoplasm","type":"exact"},{"name":"Neurohypophysis tumor","type":"exact"},{"name":"Neurohypophysis tumour","type":"exact"},{"name":"PITUICYTOMA, benign","type":"exact"},{"name":"neoplasm of neurohypophysis","type":"exact"},{"name":"neurohypophysis neoplasm","type":"exact"},{"name":"neurohypophysis neoplasm (disease)","type":"exact"},{"name":"neurohypophysis tumor","type":"exact"},{"name":"neurohypophysis tumour","type":"exact"},{"name":"posterior pituitary gland neoplasm","type":"exact"},{"name":"posterior pituitary gland tumor","type":"exact"},{"name":"posterior pituitary gland tumour","type":"exact"},{"name":"posterior pituitary neoplasm","type":"exact"},{"name":"posterior pituitary tumor","type":"exact"},{"name":"posterior pituitary tumour","type":"exact"},{"name":"tumor of neurohypophysis","type":"exact"},{"name":"tumour of neurohypophysis","type":"exact"}],"termid":"MONDO:0003257","xrefs":{"Monarch":{"xref_id":"0003257"}}}


id: internal:replaced_by
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replaced_by","termid":"internal:replaced_by"}


id: FYPO:0009019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which the poportion of cells with two nuclei is higher than normal.","definition_xrefs":["PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"increased vegetative cell population binucleate index","synonyms":[{"name":"higher proportion of binucleate cells during vegetative growth","type":"exact"},{"name":"more cells with two nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0009019"}


id: MONDO:0022293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the blood vessels of the penis. Representative examples include atherosclerosis, venous leak, and hemangioma.","definition_xrefs":["NCIT:C35218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penile disorder","termid":"MONDO:0002036"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular disorder of penis","secondary_identifiers":["UMLS:C0156307","SCTID:198029003","ICD9:607.82","MEDGEN:102349"],"synonyms":[{"name":"Penile Vascular Disorder","type":"related"},{"name":"Penile vascular disorder","type":"related"},{"name":"Penis vascular disorder","type":"related"},{"name":"Vascular disorder of penis","type":"related"},{"name":"penile vascular disorder","type":"exact"}],"termid":"MONDO:0022293","xrefs":{"Monarch":{"xref_id":"0022293"}}}


id: GO:0047398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl beta-D-mannosyl phosphate + H2O = dolichol-phosphate + mannose.","definition_xrefs":["EC:3.1.4.49","MetaCyc:3.1.4.49-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"dolichylphosphate-mannose phosphodiesterase activity","secondary_identifiers":["RHEA:12989"],"synonyms":[{"name":"dolichyl-beta-D-mannosyl-phosphate dolichylphosphohydrolase activity","type":"related"},{"name":"mannosylphosphodolichol phosphodiesterase activity","type":"related"}],"termid":"GO:0047398"}


id: MONDO:0011105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital alacrima","termid":"MONDO:0019627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"alacrima, congenital, autosomal recessive","secondary_identifiers":["OMIM:601549","MEDGEN:861034","GARD:18166","UMLS:C4012597"],"synonyms":[{"name":"alacrima, congenital, autosomal recessive","type":"exact"}],"termid":"MONDO:0011105","xrefs":{"Monarch":{"xref_id":"0011105"}}}


id: GO:0017067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + L-tyrosine methyl ester = L-tyrosine methyl ester 4-sulfate + adenosine 3',5'-diphosphate + H+.","definition_xrefs":["RHEA:19977","EC:2.8.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"tyrosine-ester sulfotransferase activity","secondary_identifiers":["MetaCyc:TYROSINE-ESTER-SULFOTRANSFERASE-RXN","KEGG_REACTION:R04213","GO:0008128"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:L-tyrosine-methyl-ester sulfotransferase activity","type":"related"},{"name":"L-tyrosine methyl ester sulfotransferase activity","type":"related"},{"name":"aryl sulfotransferase IV","type":"related"},{"name":"tyrosine-ester sulphotransferase activity","type":"exact"}],"termid":"GO:0017067"}


id: FYPO:0001707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the incidence of mitotic cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000298","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased mitotic DNA damage checkpoint activation","synonyms":[{"name":"increased mitotic DNA damage checkpoint activation under non-stressed conditions","type":"narrow"}],"termid":"FYPO:0001707"}


id: GO:2000736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stem cell differentiation","termid":"GO:2000736"}


id: MONDO:0013212
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88311],"is_not":false,"summary":null,"term":"MONDO:0013212"}]},"cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2N (CMT2N) is a mild form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy, characterized by distal legs sensory loss and weakness that can be asymmetric. Tendon reflexes are reduced in the knees and absent in ankles. Progression is slow.","definition_xrefs":["Orphanet:228174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2N","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567653","OMIM:613287","DOID:0110177","SCTID:719515001","GARD:12429","MEDGEN:413754","UMLS:C2750090"],"synonyms":[{"name":"AARS Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"CMT2N","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in AARS","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2N","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2N","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2N","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy axonal type 2N","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, axonal, type 2N","type":"related"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2N","type":"exact"},{"name":"autosomal dominant axonal Charcot-Marie-Tooth disease type 2N","type":"exact"}],"termid":"MONDO:0013212","terms_by_termid":{"MONDO:0013212":null},"xrefs":{"Monarch":{"xref_id":"0013212"}}}


id: GO:0007036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions in the vacuole or between a vacuole and its surroundings.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"vacuolar calcium ion homeostasis","termid":"GO:0007036"}


id: GO:0031023
data:
  {"annotated_genes":["SJAG_03052","SJAG_00594","SJAG_04558","SJAG_01805","SJAG_00773","SJAG_03264","SJAG_00794","SJAG_04901","SJAG_01760","SJAG_03200","SJAG_03544","SJAG_04003","SJAG_00719","SJAG_04745","SJAG_04781","SJAG_02529","SJAG_02795","SJAG_03915","SJAG_02651"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106476,106808],"is_not":false,"summary":null,"term":"GO:0031023"},{"annotations":[104240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031025"},{"annotations":[97192],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140456"},{"annotations":[79609,97193,77604],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[104241,114756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031024"},{"annotations":[95663,117125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990395"},{"annotations":[91973,109382,114629,114832,117126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903087"},{"annotations":[100168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905047"},{"annotations":[115927,93150,98765],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"},{"annotations":[91490,97255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051300"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microtubule organizing center, a structure from which microtubules grow.","definition_xrefs":["GOC:jl","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00594":null,"SJAG_00719":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_01760":null,"SJAG_01805":null,"SJAG_02529":null,"SJAG_02651":null,"SJAG_02795":null,"SJAG_03052":null,"SJAG_03200":null,"SJAG_03264":null,"SJAG_03544":null,"SJAG_03915":null,"SJAG_04003":null,"SJAG_04558":null,"SJAG_04745":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"microtubule organizing center organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"microtubule organising center organisation","type":"exact"},{"name":"microtubule organizing center organization and biogenesis","type":"related"}],"termid":"GO:0031023","terms_by_termid":{"GO:0000073":null,"GO:0031023":null,"GO:0031024":null,"GO:0031025":null,"GO:0051300":null,"GO:0140456":null,"GO:1902441":null,"GO:1903087":null,"GO:1905047":null,"GO:1990395":null}}


id: GO:0005400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal membrane transporter (obsolete GO:0005400)","synonyms":[{"name":"peroxisomal membrane transporter","type":"exact"}],"termid":"GO:0005400"}


id: PBO:0057752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1911","termid":"PBO:0057752"}


id: PBO:0079382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI","termid":"PBO:0079382"}


id: PBO:0056009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056009"}


id: MONDO:0007016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of vitamin A due to malnutrition, malabsorption, or dietary lack. It is manifested with reduced night vision, night blindness, and xerophthalmia.","definition_xrefs":["NCIT:C85220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin deficiency disorder","termid":"MONDO:0024298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin A deficiency","secondary_identifiers":["ICD9:264.8","MEDGEN:22668","ICD9:264","MedDRA:10047586","ICD9:264.9","EFO:1001237","HP:0004905","UMLS:C0042842","SCTID:72000004","icd11.foundation:435342452","MESH:D014802"],"synonyms":[{"name":"deficiencies, vitamin A","type":"related"},{"name":"deficiency, vitamin A","type":"related"},{"name":"vitamin A deficiencies","type":"related"},{"name":"vitamin A deficiency","type":"exact"},{"name":"vitamin A deficiency (disease)","type":"exact"}],"termid":"MONDO:0007016","xrefs":{"Monarch":{"xref_id":"0007016"}}}


id: PBO:0048601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ghrelin opposite strand/antisense RNA","termid":"PBO:0048601"}


id: GO:0010418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the backbone structure of pectic rhamnogalacturonan II. The back bone contains at least 8 1,4-linked alpha-D-GalpA residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogalacturonan metabolic process","termid":"GO:0010394"},{"relation_name":"is_a","term_name":"rhamnogalacturonan II metabolic process","termid":"GO:0010396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"rhamnogalacturonan II backbone metabolic process","synonyms":[{"name":"rhamnogalacturonan II backbone metabolism","type":"exact"}],"termid":"GO:0010418"}


id: GO:1990632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the submandibular gland is generated and organized.","definition_xrefs":["PMID:15063181","PMID:20890964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in salivary gland morphogenesis","termid":"GO:0060445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in submandibular gland morphogenesis","synonyms":[{"name":"submandibular gland branching morphogenesis","type":"exact"},{"name":"submandibular gland ductal branching","type":"exact"}],"termid":"GO:1990632"}


id: GO:0007163
data:
  {"annotated_genes":["SJAG_00268","SJAG_02022","SJAG_02760","SJAG_03170","SJAG_04703","SJAG_02695","SJAG_00236","SJAG_04509","SJAG_03048","SJAG_04653","SJAG_00152","SJAG_03718","SJAG_03126","SJAG_00140","SJAG_00216","SJAG_01901","SJAG_00317","SJAG_02536","SJAG_02392","SJAG_04724","SJAG_00229","SJAG_04666","SJAG_00333","SJAG_01732","SJAG_00594","SJAG_00596","SJAG_00185","SJAG_00514","SJAG_03540","SJAG_00424","SJAG_01799","SJAG_04322","SJAG_03596","SJAG_00661","SJAG_01722","SJAG_04980","SJAG_03486","SJAG_02651","SJAG_04624","SJAG_02737","SJAG_01196","SJAG_03637","SJAG_03705","SJAG_00851","SJAG_03086","SJAG_02838","SJAG_04522","SJAG_01373","SJAG_03748","SJAG_01376","SJAG_01613","SJAG_01794","SJAG_00030","SJAG_00910","SJAG_00355","SJAG_04461","SJAG_02624","SJAG_03754","SJAG_00028","SJAG_02366","SJAG_01388","SJAG_02819","SJAG_00845","SJAG_03581","SJAG_02222","SJAG_03453","SJAG_00610","SJAG_03625","SJAG_01456","SJAG_00332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61630,78339,92999,99814,105669,106303,107107,108842,111065],"is_not":false,"summary":null,"term":"GO:0007163"},{"annotations":[118485,101641,108802,119916,112737,105409,89885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[121643,106583,94451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061171"},{"annotations":[81971,72496,99090,95337,116801,80162,94129,92692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030010"},{"annotations":[78121,106475,106807,118954,98869],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000132"},{"annotations":[97729,101222,91278,90302,112738,75011,102082,107294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030950"},{"annotations":[97730,119918,116042,109562,91710,114291,101548,101642,120671,106586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061245"},{"annotations":[103184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030952"},{"annotations":[81257,78706,101117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030951"},{"annotations":[73212,75083,72146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030011"},{"annotations":[92810],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904846"},{"annotations":[109564,114461,105621],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061173"},{"annotations":[109565,118591],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[102084,95605,107296],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[105623],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[70827,96458],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000114"},{"annotations":[104306],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000099"},{"annotations":[96459,92993,115036,120819,97541,106466],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[95340,58860,111391,71269,92782,102299],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032878"},{"annotations":[89728,94286,104768,108055],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":70,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_00140":null,"SJAG_00152":null,"SJAG_00185":null,"SJAG_00216":null,"SJAG_00229":null,"SJAG_00236":null,"SJAG_00268":null,"SJAG_00317":null,"SJAG_00332":null,"SJAG_00333":null,"SJAG_00355":null,"SJAG_00424":null,"SJAG_00514":null,"SJAG_00594":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00910":null,"SJAG_01196":null,"SJAG_01373":null,"SJAG_01376":null,"SJAG_01388":null,"SJAG_01456":null,"SJAG_01613":null,"SJAG_01722":null,"SJAG_01732":null,"SJAG_01794":null,"SJAG_01799":null,"SJAG_01901":null,"SJAG_02022":null,"SJAG_02222":null,"SJAG_02366":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02737":null,"SJAG_02760":null,"SJAG_02819":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03086":null,"SJAG_03126":null,"SJAG_03170":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03540":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_03718":null,"SJAG_03748":null,"SJAG_03754":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04624":null,"SJAG_04653":null,"SJAG_04666":null,"SJAG_04703":null,"SJAG_04724":null,"SJAG_04980":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of cell polarity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:30664646":null},"secondary_identifiers":["GO:0030012","GO:0030467"],"synonyms":[{"name":"cell polarity","type":"related"},{"name":"establishment and/or maintenance of cell polarity","type":"related"},{"name":"establishment and/or maintenance of cell polarization","type":"related"}],"termid":"GO:0007163","terms_by_termid":{"GO:0000132":null,"GO:0007163":null,"GO:0030010":null,"GO:0030011":null,"GO:0030950":null,"GO:0030951":null,"GO:0030952":null,"GO:0032878":null,"GO:0051523":null,"GO:0061171":null,"GO:0061173":null,"GO:0061245":null,"GO:0061361":null,"GO:1904846":null,"GO:2000099":null,"GO:2000100":null,"GO:2000114":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: MONDO:0012744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the TPM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1Y","secondary_identifiers":["GARD:15530","OMIM:611878","UMLS:C2678476","DOID:0110457","MESH:C567507","MEDGEN:437215"],"synonyms":[{"name":"CMD1Y","type":"exact"},{"name":"TPM1 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1Y","type":"related"},{"name":"cardiomyopathy, dilated, type 1Y","type":"exact"},{"name":"dilated cardiomyopathy type 1Y","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in TPM1","type":"exact"},{"name":"left ventricular noncompaction 9","type":"related"}],"termid":"MONDO:0012744","xrefs":{"Monarch":{"xref_id":"0012744"}}}


id: MONDO:1010486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in alpaca.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, alpaca","secondary_identifiers":["OMIA:001041-30538"],"termid":"MONDO:1010486","xrefs":{"Monarch":{"xref_id":"1010486"}}}


id: GO:0050928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"negatively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis","synonyms":[{"name":"down regulation of positive chemotaxis","type":"exact"},{"name":"down-regulation of positive chemotaxis","type":"exact"},{"name":"downregulation of positive chemotaxis","type":"exact"},{"name":"inhibition of positive chemotaxis","type":"narrow"}],"termid":"GO:0050928"}


id: GO:0006730
data:
  {"annotated_genes":["SJAG_01616","SJAG_01766","SJAG_01466","SJAG_03224","SJAG_04156","SJAG_00106","SJAG_01126","SJAG_06611","SJAG_03914","SJAG_03712"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106687,115496],"is_not":false,"summary":null,"term":"GO:0006730"},{"annotations":[77487,78374,106726,60013,74336,72673,61658,73624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the transfer of one-carbon units in various oxidation states.","definition_xrefs":["GOC:pde","GOC:mah","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01126":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_03224":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"one-carbon metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_pathwayID:C1cyc","GO:0019753","GO:0019754"],"synonyms":[{"name":"one carbon metabolic process","type":"exact"},{"name":"one carbon metabolism","type":"exact"},{"name":"one-carbon metabolism","type":"exact"},{"name":"one-carbon transfer metabolic process","type":"exact"},{"name":"one-carbon transfer metabolism","type":"exact"}],"termid":"GO:0006730","terms_by_termid":{"GO:0006730":null,"GO:0035999":null}}


id: MONDO:0014051
data:
  {"annotated_genes":["SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86948],"is_not":false,"summary":null,"term":"MONDO:0014051"}]},"cv_name":"mondo","definition":"Any fatal infantile encephalocardiomyopathy in which the cause of the disease is a mutation in the COX15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal infantile encephalocardiomyopathy","termid":"MONDO:0015487"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069","MONDO:0005267"],"is_obsolete":false,"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18571","UMLS:C3554534","OMIM:615119","DOID:0080358","MEDGEN:767448"],"synonyms":[{"name":"CEMCOX2","type":"related"},{"name":"COX15 fatal infantile encephalocardiomyopathy","type":"exact"},{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome C oxidase deficiency type 2","type":"exact"},{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 2","type":"exact"},{"name":"fatal infantile encephalocardiomyopathy caused by mutation in COX15","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 6","type":"exact"}],"termid":"MONDO:0014051","terms_by_termid":{"MONDO:0014051":null},"xrefs":{"Monarch":{"xref_id":"0014051"}}}


id: GO:1903838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["PMID:19575011","GOC:als","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA 3'-UTR binding (obsolete GO:1903838)","synonyms":[{"name":"down regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"downregulation of mRNA 3' UTR binding","type":"exact"},{"name":"downregulation of mRNA 3'-UTR binding","type":"exact"},{"name":"inhibition of mRNA 3' UTR binding","type":"narrow"},{"name":"inhibition of mRNA 3'-UTR binding","type":"narrow"},{"name":"negative regulation of mRNA 3' UTR binding","type":"exact"}],"termid":"GO:1903838"}


id: FYPO:0001948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered level of substance in cytosol","termid":"FYPO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased level of substance in cytosol","synonyms":[{"name":"increased cytosolic level of substance","type":"exact"},{"name":"increased level of substance in cytosol during mitotic cell cycle","type":"related"},{"name":"increased level of substance in cytosol during vegetative growth","type":"exact"}],"termid":"FYPO:0001948"}


id: PBO:0047230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member B","termid":"PBO:0047230"}


id: FYPO:0003823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, producing inviable daughter cells, and in which the septum forms in a position that partitions both nuclei into one compartment, when a cell is exposed to hydroxyurea. Cell separation may or may not be completed.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoseptate vegetative cell with binucleate and anucleate compartments","termid":"FYPO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"septation following abnormal chromosome segregation, with binucleate and anucleate compartment formation during cellular response to hydroxyurea","synonyms":[{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"septation following abnormal chromosome segregation, with binucleate cell formation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0003823"}


id: PBO:0035730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methylation_during_vegetative_growth","termid":"PBO:0035730"}


id: GO:0043412
data:
  {"annotated_genes":["SJAG_01375","SJAG_04034","SJAG_03188","SJAG_03236","SJAG_01058","SJAG_01164","SJAG_02341","SJAG_00747","SJAG_04948","SJAG_02417","SJAG_02386","SJAG_03950","SJAG_00352","SJAG_02978","SJAG_00255","SJAG_03289","SJAG_04090","SJAG_01172","SJAG_04175","SJAG_00878","SJAG_02042","SJAG_03311","SJAG_00088","SJAG_01269","SJAG_01264","SJAG_04704","SJAG_03871","SJAG_03676","SJAG_04890","SJAG_04189","SJAG_03790","SJAG_00499","SJAG_00604","SJAG_04182","SJAG_03240","SJAG_00831","SJAG_04954","SJAG_00886","SJAG_00776","SJAG_02503","SJAG_02350","SJAG_05023","SJAG_03056","SJAG_04363","SJAG_02764","SJAG_04848","SJAG_04265","SJAG_02467","SJAG_03932","SJAG_04085","SJAG_01261","SJAG_02903","SJAG_01638","SJAG_00174","SJAG_03325","SJAG_02163","SJAG_02783","SJAG_03213","SJAG_04065","SJAG_03901","SJAG_03082","SJAG_02302","SJAG_00033","SJAG_04680","SJAG_03333","SJAG_01418","SJAG_00816","SJAG_04649","SJAG_02261","SJAG_02268","SJAG_00683","SJAG_03896","SJAG_04011","SJAG_03713","SJAG_00924","SJAG_02996","SJAG_01575","SJAG_01858","SJAG_02352","SJAG_02056","SJAG_03150","SJAG_04821","SJAG_01595","SJAG_04316","SJAG_03332","SJAG_04906","SJAG_01781","SJAG_01314","SJAG_05334","SJAG_04452","SJAG_00720","SJAG_01006","SJAG_00892","SJAG_03774","SJAG_04181","SJAG_05348","SJAG_02637","SJAG_01018","SJAG_01276","SJAG_04127","SJAG_04201","SJAG_00394","SJAG_03764","SJAG_02648","SJAG_00615","SJAG_03149","SJAG_01491","SJAG_03616","SJAG_03555","SJAG_04770","SJAG_01877","SJAG_04453","SJAG_04233","SJAG_00378","SJAG_03677","SJAG_00598","SJAG_02024","SJAG_02099","SJAG_01024","SJAG_00235","SJAG_06560","SJAG_00083","SJAG_00722","SJAG_00183","SJAG_00727","SJAG_01069","SJAG_00186","SJAG_05249","SJAG_04544","SJAG_06284","SJAG_01950","SJAG_03410","SJAG_04754","SJAG_01302","SJAG_04735","SJAG_02179","SJAG_00358","SJAG_00744","SJAG_04095","SJAG_01972","SJAG_04952","SJAG_02519","SJAG_04700","SJAG_03572","SJAG_03032","SJAG_04728","SJAG_03843","SJAG_03733","SJAG_05032","SJAG_03008","SJAG_02863","SJAG_00795","SJAG_04231","SJAG_04113","SJAG_00251","SJAG_03330","SJAG_03016","SJAG_04380","SJAG_03755","SJAG_00334","SJAG_05228","SJAG_01776","SJAG_02084","SJAG_00554","SJAG_00579","SJAG_05297","SJAG_01021","SJAG_00319","SJAG_03877","SJAG_02082","SJAG_03773","SJAG_05977","SJAG_05219","SJAG_02821","SJAG_00943","SJAG_04756","SJAG_04367","SJAG_01041","SJAG_03656","SJAG_00437","SJAG_04846","SJAG_00774","SJAG_01958","SJAG_03367","SJAG_00566","SJAG_01389","SJAG_04993","SJAG_02102","SJAG_04053","SJAG_03125","SJAG_00325","SJAG_00865","SJAG_04401","SJAG_02281","SJAG_04736","SJAG_02377","SJAG_01234","SJAG_04571"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036261"},{"annotations":[73019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019988"},{"annotations":[82082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061504"},{"annotations":[96744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045007"},{"annotations":[65432,113069,62341,81832,101897,66863,64339,78641,70732,92980,79012,106945,74896,76611,101685,95763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[68174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"},{"annotations":[57307,108173,77304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000455"},{"annotations":[62106,71402,57203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098734"},{"annotations":[79893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[77260,120649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[108830,118970,96130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[94658,78011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[82107,74727,77433,72436,80290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990481"},{"annotations":[80602,94870,112306,72780,91482,108442,93307,82262,94749,97180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000338"},{"annotations":[70204,97588,115953,76215,77211,64119,58990,110350,64423,119837,101935,73835,68140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006486"},{"annotations":[120808,68205,80927,60181,78818,81938,59847,79664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017183"},{"annotations":[107175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009249"},{"annotations":[81145,76462,79806,112682,77128,77608,71814,78762,112688,79314,75419,76590,80146,81011,81725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006487"},{"annotations":[59934,100675,100676,102237,78200,80688,76205,100673,120070,81353,89329,81063,71505,100674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018279"},{"annotations":[73125,81496,74673,76849,91091,75947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045116"},{"annotations":[81146,112683,76591,120071,79315,63926,112689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006493"},{"annotations":[103459,94897,107911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"},{"annotations":[77346,74277,74295,77463,77236,99652,116647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016925"},{"annotations":[62666,72420,75976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032447"},{"annotations":[66316,70557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001522"},{"annotations":[105020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990983"},{"annotations":[60386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106005"},{"annotations":[81944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[74156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904812"},{"annotations":[81411,80061,80471,77407,80747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070475"},{"annotations":[67042,76913,80536,81228,64968,65336,59889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031167"},{"annotations":[59463,82109,79411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031118"},{"annotations":[95992,100690,113329,112171,61618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"},{"annotations":[76284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000454"},{"annotations":[97073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120049"},{"annotations":[61119,79412,82110,108174,108237,59458,64928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"},{"annotations":[59387,69050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[74157,109274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051391"},{"annotations":[108718,112129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[107723,92303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[61140,66096,67200,76290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002943"},{"annotations":[75927,63916,77156,98107,75463,74569,74176,77699,99968,74238,96576,78010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030488"},{"annotations":[61861,72749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006400"},{"annotations":[72902,79889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[75048,106061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[116822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[77434,74728,80291,108175,64740,104411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031119"},{"annotations":[100175,80546,101356,59076,103049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002949"},{"annotations":[103024,75586,59429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002100"},{"annotations":[115968,81582,74101,120809,102485,112126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002926"},{"annotations":[90096,95791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[74154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002101"},{"annotations":[91523,97674,100482,100481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002099"},{"annotations":[79326,119209,75971,75850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002143"},{"annotations":[107495,97942,120677,89620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002098"},{"annotations":[104812,99744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"},{"annotations":[96577,75464,74177,76656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological macromolecule, resulting in a change in its properties.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":198,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00083":null,"SJAG_00088":null,"SJAG_00174":null,"SJAG_00183":null,"SJAG_00186":null,"SJAG_00235":null,"SJAG_00251":null,"SJAG_00255":null,"SJAG_00319":null,"SJAG_00325":null,"SJAG_00334":null,"SJAG_00352":null,"SJAG_00358":null,"SJAG_00378":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00499":null,"SJAG_00554":null,"SJAG_00566":null,"SJAG_00579":null,"SJAG_00598":null,"SJAG_00604":null,"SJAG_00615":null,"SJAG_00683":null,"SJAG_00720":null,"SJAG_00722":null,"SJAG_00727":null,"SJAG_00744":null,"SJAG_00747":null,"SJAG_00774":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00865":null,"SJAG_00878":null,"SJAG_00886":null,"SJAG_00892":null,"SJAG_00924":null,"SJAG_00943":null,"SJAG_01006":null,"SJAG_01018":null,"SJAG_01021":null,"SJAG_01024":null,"SJAG_01041":null,"SJAG_01058":null,"SJAG_01069":null,"SJAG_01164":null,"SJAG_01172":null,"SJAG_01234":null,"SJAG_01261":null,"SJAG_01264":null,"SJAG_01269":null,"SJAG_01276":null,"SJAG_01302":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_01389":null,"SJAG_01418":null,"SJAG_01491":null,"SJAG_01575":null,"SJAG_01595":null,"SJAG_01638":null,"SJAG_01776":null,"SJAG_01781":null,"SJAG_01858":null,"SJAG_01877":null,"SJAG_01950":null,"SJAG_01958":null,"SJAG_01972":null,"SJAG_02024":null,"SJAG_02042":null,"SJAG_02056":null,"SJAG_02082":null,"SJAG_02084":null,"SJAG_02099":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02179":null,"SJAG_02261":null,"SJAG_02268":null,"SJAG_02281":null,"SJAG_02302":null,"SJAG_02341":null,"SJAG_02350":null,"SJAG_02352":null,"SJAG_02377":null,"SJAG_02386":null,"SJAG_02417":null,"SJAG_02467":null,"SJAG_02503":null,"SJAG_02519":null,"SJAG_02637":null,"SJAG_02648":null,"SJAG_02764":null,"SJAG_02783":null,"SJAG_02821":null,"SJAG_02863":null,"SJAG_02903":null,"SJAG_02978":null,"SJAG_02996":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03125":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03213":null,"SJAG_03236":null,"SJAG_03240":null,"SJAG_03289":null,"SJAG_03311":null,"SJAG_03325":null,"SJAG_03330":null,"SJAG_03332":null,"SJAG_03333":null,"SJAG_03367":null,"SJAG_03410":null,"SJAG_03555":null,"SJAG_03572":null,"SJAG_03616":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03677":null,"SJAG_03713":null,"SJAG_03733":null,"SJAG_03755":null,"SJAG_03764":null,"SJAG_03773":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03843":null,"SJAG_03871":null,"SJAG_03877":null,"SJAG_03896":null,"SJAG_03901":null,"SJAG_03932":null,"SJAG_03950":null,"SJAG_04011":null,"SJAG_04034":null,"SJAG_04053":null,"SJAG_04065":null,"SJAG_04085":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04113":null,"SJAG_04127":null,"SJAG_04175":null,"SJAG_04181":null,"SJAG_04182":null,"SJAG_04189":null,"SJAG_04201":null,"SJAG_04231":null,"SJAG_04233":null,"SJAG_04265":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04367":null,"SJAG_04380":null,"SJAG_04401":null,"SJAG_04452":null,"SJAG_04453":null,"SJAG_04544":null,"SJAG_04571":null,"SJAG_04649":null,"SJAG_04680":null,"SJAG_04700":null,"SJAG_04704":null,"SJAG_04728":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04754":null,"SJAG_04756":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04846":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_04906":null,"SJAG_04948":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_04993":null,"SJAG_05023":null,"SJAG_05032":null,"SJAG_05219":null,"SJAG_05228":null,"SJAG_05249":null,"SJAG_05297":null,"SJAG_05334":null,"SJAG_05348":null,"SJAG_05977":null,"SJAG_06284":null,"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macromolecule modification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0043412","terms_by_termid":{"GO:0000338":null,"GO:0000452":null,"GO:0000454":null,"GO:0000455":null,"GO:0001522":null,"GO:0002098":null,"GO:0002099":null,"GO:0002100":null,"GO:0002101":null,"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002143":null,"GO:0002926":null,"GO:0002939":null,"GO:0002940":null,"GO:0002943":null,"GO:0002946":null,"GO:0002949":null,"GO:0006400":null,"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0009249":null,"GO:0016925":null,"GO:0017183":null,"GO:0018279":null,"GO:0019988":null,"GO:0030488":null,"GO:0031118":null,"GO:0031119":null,"GO:0031120":null,"GO:0031167":null,"GO:0031591":null,"GO:0032447":null,"GO:0035269":null,"GO:0036261":null,"GO:0045007":null,"GO:0045116":null,"GO:0051391":null,"GO:0061504":null,"GO:0070475":null,"GO:0070476":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0098734":null,"GO:0106004":null,"GO:0106005":null,"GO:0106217":null,"GO:0120049":null,"GO:1904380":null,"GO:1904812":null,"GO:1990481":null,"GO:1990799":null,"GO:1990983":null}}


id: PBO:0047942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(14)(q24.1)","termid":"PBO:0047942"}


id: PBO:0044852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 133 (pseudogene)","termid":"PBO:0044852"}


id: PBO:0046330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecto-NOX disulfide-thiol exchanger 1","termid":"PBO:0046330"}


id: PBO:0011077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain protein Rim20 (predicted)","termid":"PBO:0011077"}


id: PBO:0064910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 1 like (pseudogene)","termid":"PBO:0064910"}


id: GO:0141221
data:
  {"annotated_genes":["SJAG_03844","SJAG_03627","SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111442,64758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[111443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[111444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[111445,99108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[111446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[111447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-acetyl-L-lysyl-[histone] = acetate + L-lysyl-[histone].","definition_xrefs":["PMID:24691964","PMID:28450737","RHEA:58196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_03627":null,"SJAG_03844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0033558","GO:0016787","GO:0016810","GO:0003824","GO:0140096","GO:0003674","GO:0019213"],"is_obsolete":false,"name":"histone deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.5.1.98-RXN","EC:3.5.1.98"],"synonyms":[{"name":"histone deacetylase activity","type":"broad"},{"name":"histone deacetylase activity, NAD-independent","type":"exact"}],"termid":"GO:0141221","terms_by_termid":{"GO:0031078":null,"GO:0032129":null,"GO:0034739":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null}}


id: GO:0032595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell receptor within a lipid bilayer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport within lipid bilayer","termid":"GO:0032594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"B cell receptor transport within lipid bilayer","synonyms":[{"name":"B cell receptor translocation within membrane","type":"exact"},{"name":"BCR translocation within membrane","type":"exact"},{"name":"BCR transport within lipid bilayer","type":"exact"}],"termid":"GO:0032595"}


id: PBO:0069006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 250, pseudogene","termid":"PBO:0069006"}


id: SO:0001143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The peptide twists in an anticlockwise, left handed manner. The dihedral angles for this turn are: Residue(i): -140 degrees < chi(1) -120 degrees < -20 degrees, +80 degrees psi +120 degrees < +180 degrees, residue(i+1): +20 degrees < phi < +140 degrees, -40 < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine_threonine_turn","termid":"SO:0001141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"st_turn_left_handed_type_two","secondary_identifiers":["BS:00232"],"synonyms":[{"name":"st turn left handed type two","type":"exact"},{"name":"st_turn_iil","type":"exact"}],"termid":"SO:0001143"}


id: GO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine catabolic process","termid":"GO:0042424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine catabolic process","secondary_identifiers":["Reactome:R-HSA-379398","Reactome:R-HSA-379397"],"synonyms":[{"name":"dopamine breakdown","type":"exact"},{"name":"dopamine catabolism","type":"exact"},{"name":"dopamine degradation","type":"exact"}],"termid":"GO:0042420"}


id: PBO:0030667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_27S_rRNA_precursor_level","termid":"PBO:0030667"}


id: MONDO:0012232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stutter disorder","termid":"MONDO:0000723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stuttering, familial persistent, 2","secondary_identifiers":["MESH:C563756","MEDGEN:332218","OMIM:609261","UMLS:C1836484"],"synonyms":[{"name":"STUT2","type":"exact"},{"name":"stuttering, familial persistent, 2","type":"exact"}],"termid":"MONDO:0012232","xrefs":{"Monarch":{"xref_id":"0012232"}}}


id: MONDO:0016511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious embryofetopathy","secondary_identifiers":["UMLS:C5439342","MEDGEN:1736309","Orphanet:232035"],"termid":"MONDO:0016511","xrefs":{"Monarch":{"xref_id":"0016511"}}}


id: GO:0046279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3,4-dihydroxybenzoate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"3,4-dihydroxybenzoate metabolic process","termid":"GO:0046278"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3,4-dihydroxybenzoate biosynthetic process","synonyms":[{"name":"protocatechuate anabolism","type":"exact"},{"name":"protocatechuate biosynthesis","type":"exact"},{"name":"protocatechuate biosynthetic process","type":"exact"},{"name":"protocatechuate formation","type":"exact"},{"name":"protocatechuate synthesis","type":"exact"}],"termid":"GO:0046279"}


id: PBO:0028263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_queuosine_level_in_tRNA","termid":"PBO:0028263"}


id: PBO:0074813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 14E","termid":"PBO:0074813"}


id: PATO:0002054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along transverse axis.","definition_xrefs":["PATOC:msp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laterally compressed","synonyms":[{"name":"laterally flattened","type":"exact"},{"name":"transversely flattened","type":"related"}],"termid":"PATO:0002054"}


id: PATO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000084 relative rhythym (obsolete PATO:0000084)","termid":"PATO:0000084"}


id: PBO:0062218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AN member 2 pseudogene","termid":"PBO:0062218"}


id: PBO:0091900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf5","termid":"PBO:0091900"}


id: PBO:0080853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS domain containing 2","termid":"PBO:0080853"}


id: PR:Q9P6N6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 38 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01086","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 38 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.10c","secondary_identifiers":["UniProtKB:Q9P6N6"],"synonyms":[{"name":"Spom972h-SLC25A38","type":"exact"}],"termid":"PR:Q9P6N6"}


id: PBO:0052531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 4","termid":"PBO:0052531"}


id: GO:1904948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a midbrain dopaminergic neuron.","definition_xrefs":["GOC:TermGenie","PMID:17331494","PMID:19122665","GO_REF:0000086","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"dopaminergic neuron differentiation","termid":"GO:0071542"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain dopaminergic neuron differentiation","synonyms":[{"name":"DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"mDA neuron differentiation","type":"exact"},{"name":"midbrain DA neurogenesis","type":"exact"},{"name":"midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1904948"}


id: PBO:0036459
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcript","termid":"PBO:0036459"}


id: GO:0015449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type IV protein (DNA-protein) secretor activity (obsolete GO:0015449)","synonyms":[{"name":"type IV protein (DNA-protein) secretor activity","type":"exact"}],"termid":"GO:0015449"}


id: PBO:0061120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 9 pseudogene 1","termid":"PBO:0061120"}


id: MONDO:0018537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Squamous cell carcinoma of the gallbladder and extrahepatic biliary tract is a rare hepatic and biliary tract tumor, arising either in the gallbladder itself or in the epithelium lining the extrahepatic biliary tree, the cystic duct and peribiliary glands. It is characterized by a substantial keratinization with abundant keratohyalin pearls and central deposition of dense keratin material within infiltrative nests and locally aggressive nature. In the early stages of the disease symptoms are vague and nonspecific (abdominal pain, jaundice and vomiting). In the advanced stages it may present with a bulky tumor and symptoms of adjacent organ involvement.","definition_xrefs":["Orphanet:424996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct squamous cell carcinoma","termid":"MONDO:0006203"},{"relation_name":"is_a","term_name":"carcinoma of gallbladder and extrahepatic biliary tract","termid":"MONDO:0018918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"squamous cell carcinoma of gallbladder and extrahepatic biliary tract","secondary_identifiers":["UMLS:C4707898","MEDGEN:1635098","SCTID:766978002","GARD:21792"],"synonyms":[{"name":"squamous cell carcinoma of gallblader and EBT","type":"exact"}],"termid":"MONDO:0018537","xrefs":{"Monarch":{"xref_id":"0018537"}}}


id: MONDO:0021100
data:
  {"annotated_genes":["SJAG_03720","SJAG_02426","SJAG_04502","SJAG_01410","SJAG_03453","SJAG_02460","SJAG_00079","SJAG_04206","SJAG_00757","SJAG_04394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89153,89154,88033,89152,88031,89151,88032,89155,88030,88034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm of the breast parenchyma. It can originate from the ducts, lobules or the breast adipose tissue. Breast neoplasms are much more common in females than males.","definition_xrefs":["NCIT:C2910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00757":null,"SJAG_01410":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_03453":null,"SJAG_03720":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04502":null},"genotype_count":0,"is_obsolete":false,"name":"breast neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:126926005","UMLS:C1458155","ONCOTREE:BREAST","EFO:0003869","ICD9:239.3","MESH:D001943","MEDGEN:264172"],"synonyms":[{"name":"breast neoplasm","type":"exact"},{"name":"breast neoplasm (disease)","type":"exact"},{"name":"breast tumor","type":"exact"},{"name":"breast tumour","type":"exact"},{"name":"neoplasm of breast","type":"exact"},{"name":"neoplasm of the breast","type":"exact"},{"name":"neoplasm, breast","type":"exact"},{"name":"tumor of breast","type":"exact"},{"name":"tumor of the breast","type":"exact"},{"name":"tumour of breast","type":"exact"},{"name":"tumour of the breast","type":"exact"}],"termid":"MONDO:0021100","terms_by_termid":{"MONDO:0016419":null},"xrefs":{"Monarch":{"xref_id":"0021100"}}}


id: PBO:0070471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 6","termid":"PBO:0070471"}


id: PBO:0065698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 3","termid":"PBO:0065698"}


id: GO:0070968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyrroloquinoline quinone, PQQ, the coenzyme or the prosthetic group of certain alcohol dehydrogenases and glucose dehydrogenases.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyrroloquinoline quinone binding","synonyms":[{"name":"PQQ binding","type":"exact"}],"termid":"GO:0070968"}


id: PBO:0117086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA2 antisense RNA 2","termid":"PBO:0117086"}


id: GO:0009576
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a leucoplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"leucoplast","termid":"GO:0009516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"leucoplast stroma","termid":"GO:0009576"}


id: PBO:0052631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRT7 antisense RNA 1","termid":"PBO:0052631"}


id: PBO:0039244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDH1A3 antisense RNA 1","termid":"PBO:0039244"}


id: GO:0102461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside + UDP-L-rhamnose = kaempferol 3-O-rhamnosyl(1->2)glucoside-7-O-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol 3-sophoroside 7-O-rhamnosyltransferase activity (obsolete GO:0102461)","termid":"GO:0102461"}


id: MONDO:0859332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical dysplasia, complex, with other brain malformations 11","secondary_identifiers":["UMLS:C5774270","MEDGEN:1824043","OMIM:620156"],"termid":"MONDO:0859332","xrefs":{"Monarch":{"xref_id":"0859332"}}}


id: PBO:0056357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 10","termid":"PBO:0056357"}


id: PBO:0085109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear transport factor (karyopherin); involved in protein transport between the cytoplasm and nucleoplasm; similar to Nmd5p, Cse1p, Lph2p, and the human cellular apoptosis susceptibility protein, CAS1","termid":"PBO:0085109"}


id: GO:0016092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prenols, isoprenoids of general formula (H-CH2-C(CH3)=CH-CH2-)n-OH, any primary monohydroxy alcohol whose carbon skeleton consists of two or more isoprenoid residues linked head to tail.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"},{"relation_name":"is_a","term_name":"prenol metabolic process","termid":"GO:0016090"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"prenol catabolic process","synonyms":[{"name":"prenol breakdown","type":"exact"},{"name":"prenol catabolism","type":"exact"},{"name":"prenol degradation","type":"exact"}],"termid":"GO:0016092"}


id: GO:0015888
data:
  {"annotated_genes":["SJAG_02962","SJAG_04673","SJAG_00835","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[102587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[91989,91988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of thiamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Thiamine is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"thiamine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiamin transport","type":"exact"},{"name":"vitamin B1 transport","type":"exact"}],"termid":"GO:0015888","terms_by_termid":{"GO:0071934":null,"GO:0140125":null,"GO:1990545":null}}


id: PBO:0087158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAPII degradation factor; forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII present in an elongation complex; interacts with general transcription factor TFIIH; mutant is deficient in Zip1p loading onto chromosomes during meiosis","termid":"PBO:0087158"}


id: GO:0031935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that affects the rate, extent or location of chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin silencing (obsolete GO:0031935)","synonyms":[{"name":"regulation of heterochromatic silencing","type":"related"}],"termid":"GO:0031935"}


id: PBO:0086371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl alcohol dehydrogenase; similar to Phanerochaete chrysosporium aryl alcohol dehydrogenase; ORFs AAD6/YFL056C and AAD16/YFL057C are displaced from one another by -1 frameshift; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086371"}


id: MONDO:0006170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of the conjunctiva.","definition_xrefs":["NCIT:C27605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye adnexa disorder","termid":"MONDO:0000462"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival disorder","secondary_identifiers":["DOID:4251","MEDGEN:3207","EFO:1000203","ICD10CM:H10-H11","UMLS:C0009759"],"synonyms":[{"name":"conjunctiva disease","type":"exact"},{"name":"conjunctiva disease or disorder","type":"exact"},{"name":"conjunctival disease","type":"exact"},{"name":"conjunctival disorder","type":"exact"},{"name":"disease of conjunctiva","type":"exact"},{"name":"disease or disorder of conjunctiva","type":"exact"},{"name":"disorder of conjunctiva","type":"exact"}],"termid":"MONDO:0006170","xrefs":{"Monarch":{"xref_id":"0006170"}}}


id: MONDO:0005506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An cancer with eccrine differentiation arising from the sweat glands.B","definition_xrefs":["EFO:0005553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine sweat gland neoplasm","termid":"MONDO:0002090"},{"relation_name":"is_a","term_name":"sweat gland cancer","termid":"MONDO:0002206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"eccrine sweat gland cancer","secondary_identifiers":["UMLS:C1334577","DOID:4921","MEDGEN:233660","NCIT:C5559"],"synonyms":[{"name":"cancer of eccrine sweat gland","type":"exact"},{"name":"eccrine sweat gland cancer","type":"exact"},{"name":"malignant eccrine neoplasm","type":"exact"},{"name":"malignant eccrine neoplasm of skin","type":"exact"},{"name":"malignant eccrine neoplasm of the skin","type":"exact"},{"name":"malignant eccrine skin neoplasm","type":"exact"},{"name":"malignant eccrine skin tumor","type":"exact"},{"name":"malignant eccrine skin tumour","type":"exact"},{"name":"malignant eccrine sweat gland neoplasm","type":"exact"},{"name":"malignant eccrine tumor","type":"exact"},{"name":"malignant eccrine tumor of skin","type":"exact"},{"name":"malignant eccrine tumor of the skin","type":"exact"},{"name":"malignant eccrine tumour","type":"exact"},{"name":"malignant eccrine tumour of skin","type":"exact"},{"name":"malignant eccrine tumour of the skin","type":"exact"},{"name":"malignant neoplasm of eccrine sweat gland","type":"exact"}],"termid":"MONDO:0005506","xrefs":{"Monarch":{"xref_id":"0005506"}}}


id: GO:0016080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which synaptic vesicles are directed to specific destination membranes, mediated by molecules at the vesicle membrane and target membrane surfaces.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0023052","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle targeting","termid":"GO:0016080"}


id: GO:0005531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose binding lectin (obsolete GO:0005531)","synonyms":[{"name":"galactose binding lectin","type":"exact"}],"termid":"GO:0005531"}


id: PBO:0043068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRM3 antisense RNA 1","termid":"PBO:0043068"}


id: FYPO_EXT:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"intermediate fraction of cells (penetrance) or moderate phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium","termid":"FYPO_EXT:0000002"}


id: MONDO:1010457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, Rhesus monkey","secondary_identifiers":["OMIA:000515-9544"],"termid":"MONDO:1010457","xrefs":{"Monarch":{"xref_id":"1010457"}}}


id: PBO:0012577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 4 Pre6","termid":"PBO:0012577"}


id: PBO:0073658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 transcription regulator family member A","termid":"PBO:0073658"}


id: MONDO:0018861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare mitochondrial disorder characterized by facial dysmorphism similar to that seen in Zellweger syndrome, such as frontal bossing, high forehead, upslanting palpebral fissures, hypoplastic supraorbital ridges, and epicanthal folds, and in addition, pale skin, profound hypotonia, developmental delay, and minor metabolic anomalies. No peroxysomal defects, however, have been reported. Transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:50812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"Zellweger-like syndrome without peroxisomal anomalies","secondary_identifiers":["SCTID:718880003","UMLS:C4305104","icd11.foundation:697302760","GARD:18841","MEDGEN:930773"],"synonyms":[{"name":"AHN-Lerman-Sagie syndrome","type":"exact"}],"termid":"MONDO:0018861","xrefs":{"Monarch":{"xref_id":"0018861"}}}


id: GO:0003197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a cardiac cushion over time, from its initial formation to the mature structure. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion development","termid":"GO:0003197"}


id: GO:0103069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 17alpha-hydroxyprogesterone + O2 + reduced [NADPH--hemoprotein reductase] = 11-deoxycortisol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:50308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 21-monooxygenase activity","termid":"GO:0004509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"17-hydroxyprogesterone 21-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN66-356"],"termid":"GO:0103069"}


id: GO:2001055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process","termid":"GO:2001053"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell apoptotic process","synonyms":[{"name":"positive regulation of mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:2001055"}


id: PBO:0073795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 2","termid":"PBO:0073795"}


id: MONDO:0015358
data:
  {"annotated_genes":["SJAG_01383","SJAG_00252","SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011002"},{"annotations":[88790,88791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032792"}]},"cv_name":"mondo","definition":"A group of slowly progressive inherited disorders affecting motor and sensory peripheral nerves. Subtypes include HMSNs I-VII. HMSN I and II both refer to CHARCOT-MARIE-Tooth DISEASE. HMSN III refers to hypertrophic neuropathy of infancy. HMSN IV refers to REFSUM DISEASE. HMSN V refers to a condition marked by a hereditary motor and sensory neuropathy associated with spastic paraplegia (see SPASTIC PARAPLEGIA, HEREDITARY). HMSN VI refers to HMSN associated with an inherited optic atrophy (OPTIC ATROPHIES, HEREDITARY), and HMSN VII refers to HMSN associated with retinitis pigmentosa. (From Adams et al., Principles of Neurology, 6th ed, p1343)","definition_xrefs":["MESH:D015417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00252":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary motor and sensory neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0027888","MEDGEN:45066","NANDO:2200855","Orphanet:140450","GARD:12685","icd11.foundation:1538134578","SCTID:398100001"],"synonyms":[{"name":"HMSN","type":"exact"}],"termid":"MONDO:0015358","terms_by_termid":{"MONDO:0011002":null,"MONDO:0032792":null},"xrefs":{"Monarch":{"xref_id":"0015358"}}}


id: PBO:0067023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 36, pseudogene","termid":"PBO:0067023"}


id: PBO:0078982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon TGA) 2-1","termid":"PBO:0078982"}


id: GO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-7 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-7 receptor activity","synonyms":[{"name":"IL-7 receptor activity","type":"exact"},{"name":"IL-7R","type":"exact"}],"termid":"GO:0004917"}


id: PR:Q9HFE8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tra1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFE8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription-associated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.03c","synonyms":[{"name":"Spom972h-tra1","type":"exact"}],"termid":"PR:Q9HFE8"}


id: GO:0099001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into the host cell through the host cell envelope via a long, flexible tail ejection system consisting a baseplate, a central tube and a terminator complex which attaches the tail to the phage capsid. Upon binding to the host cell surface, the baseplate changes its conformation and triggers genome ejection into the host cell cytoplasm. Occurs in non-enveloped prokaryotic viruses.","definition_xrefs":["GOC:dos","PMID:22297512","VZ:3952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont genome ejection through host cell envelope","termid":"GO:0039678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome ejection through host cell envelope, long flexible tail mechanism","synonyms":[{"name":"viral genome ejection through host cell envelope, long flexible tail mechanism","type":"related"},{"name":"viral long flexible tail ejection system","type":"exact"}],"termid":"GO:0099001"}


id: PBO:0031421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_morphology","termid":"PBO:0031421"}


id: MOD:00668
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a decanoyloxy group.","definition_xrefs":["Unimod:449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decanoylated residue","termid":"MOD:00667"},{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-decanoylated residue","synonyms":[{"name":"Decanoyl","type":"related"},{"name":"ODecRes","type":"exact"},{"name":"lipid","type":"related"}],"termid":"MOD:00668"}


id: MOD:01911
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one chlorine atom.","definition_xrefs":["Unimod:936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated residue","termid":"MOD:00753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochlorinated residue","synonyms":[{"name":"Cl1Res","type":"exact"}],"termid":"MOD:01911"}


id: PR:G2TRU5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmc2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX assembly mitochondrial protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.20","synonyms":[{"name":"Cx9C motif-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cmc2","type":"exact"}],"termid":"PR:G2TRU5"}


id: PBO:0110030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 2","termid":"PBO:0110030"}


id: PBO:0085276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal malate dehydrogenase; catalyzes interconversion of malate and oxaloacetate; involved in the glyoxylate cycle; mutation in human homolog MDH2 causes early-onset severe encephalopathy","termid":"PBO:0085276"}


id: GO:0010511
data:
  {"annotated_genes":["SJAG_03170","SJAG_00053","SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59709,92256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[119543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol.","definition_xrefs":["GOC:tb","GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_02613":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0010511","terms_by_termid":{"GO:1902647":null,"GO:1902648":null}}


id: GO:0051180
data:
  {"annotated_genes":["SJAG_03652","SJAG_02779","SJAG_03503","SJAG_05175","SJAG_02152","SJAG_02962","SJAG_04673","SJAG_00835","SJAG_02780","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73561,81034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[62454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015884"},{"annotations":[105560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[74242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"},{"annotations":[120781,91983,119479,91982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[91984,120782,91985,119480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[120783,91986,91987,119481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"},{"annotations":[102587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[91988,91989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of vitamins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A vitamin is one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02152":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03503":null,"SJAG_03652":null,"SJAG_03808":null,"SJAG_04673":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vitamin transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"vitamin or cofactor transport","type":"broad"}],"termid":"GO:0051180","terms_by_termid":{"GO:0015884":null,"GO:0071934":null,"GO:0098717":null,"GO:0140125":null,"GO:1903090":null,"GO:1903091":null,"GO:1903092":null,"GO:1905135":null,"GO:1990545":null}}


id: PBO:0071391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 14","termid":"PBO:0071391"}


id: PBO:0039140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ajuba LIM protein","termid":"PBO:0039140"}


id: GO:0106328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + H+ + UDP.","definition_xrefs":["RHEA:46884"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylgalactosaminyl-O-glycosyl-seryl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity (obsolete GO:0106328)","termid":"GO:0106328"}


id: GO:1905574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GM2.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","PMID:1454804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"ganglioside GM2 binding","termid":"GO:1905574"}


id: FYPO:0006418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cleavage and rejoining of intermediates formed during meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"},{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal resolution of meiotic recombination intermediates","termid":"FYPO:0006418"}


id: FYPO:0000343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of hydrogen sulfide released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of hydrogen sulfide in growth medium","synonyms":[{"name":"increased concentration of H2S in growth medium","type":"exact"},{"name":"increased hydrogen sulfide biosynthesis","type":"related"}],"termid":"FYPO:0000343"}


id: PBO:0034277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_end_location","termid":"PBO:0034277"}


id: PBO:0040963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 34","termid":"PBO:0040963"}


id: FYPO:0004992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during interphase of the meiotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiotic cell cycle","termid":"FYPO:0004991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during meiotic interphase","synonyms":[{"name":"decreased protein accumulation during meiotic interphase","type":"related"},{"name":"decreased protein level during interphase of meiotic cell cycle","type":"exact"},{"name":"reduced protein level during meiotic interphase","type":"exact"}],"termid":"FYPO:0004992"}


id: PBO:0042737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPN antisense RNA 1","termid":"PBO:0042737"}


id: MONDO:1010674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any thrombopathia in cattle in which the cause of the disease is a mutation in the RASGRP2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"thrombopathia, non-human animal","termid":"MONDO:1011695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombopathia, RASGRP2-related, cattle","secondary_identifiers":["OMIA:002433-9913"],"termid":"MONDO:1010674","xrefs":{"Monarch":{"xref_id":"1010674"}}}


id: MONDO:0014339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive cerebellar ataxia in which the cause of the disease is a mutation in the STUB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 16","secondary_identifiers":["OMIM:615768","DOID:0080029","GARD:17689","Orphanet:412057","MEDGEN:1674542","UMLS:C5190574"],"synonyms":[{"name":"SCAR16","type":"exact"},{"name":"STUB1 autosomal recessive cerebellar ataxia","type":"exact"},{"name":"autosomal recessive cerebellar ataxia caused by mutation in STUB1","type":"exact"},{"name":"autosomal recessive cerebellar ataxia due to STUB1 deficiency","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia 16","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 16","type":"exact"},{"name":"spinocerebellar ataxia autosomal recessive type 16","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 16","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 16","type":"exact"}],"termid":"MONDO:0014339","xrefs":{"Monarch":{"xref_id":"0014339"}}}


id: PBO:0064739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 75","termid":"PBO:0064739"}


id: GO:0047778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [citrate (pro-3S)-lyase](acetyl form) + H2O = [citrate (pro-3S)-lyase](thiol form) + acetate.","definition_xrefs":["EC:3.1.2.16","MetaCyc:CITRATE-PRO-3S-LYASE-THIOLESTERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"[citrate-(pro-3S)-lyase] thiolesterase activity","secondary_identifiers":["RHEA:13657"],"synonyms":[{"name":"[citrate-(pro-3S)-lyase] thioesterase activity","type":"related"},{"name":"citrate (pro-3S)-lyase thiolesterase activity","type":"exact"},{"name":"citrate lyase deacetylase activity","type":"related"},{"name":"citrate-(pro-3S)-lyase thioesterase activity","type":"related"},{"name":"citrate-(pro-3S)-lyase thiolesterase activity","type":"related"},{"name":"citrate-(pro-3S)-lyase(acetyl-form) hydrolase activity","type":"related"}],"termid":"GO:0047778"}


id: GO:0034910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-hydroxy-3-succinoylpyridine + H2O = succinic semialdehyde + 2,5-dihydroxypyridine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy-3-succinoylpyridine hydrolase activity (obsolete GO:0034910)","termid":"GO:0034910"}


id: PBO:0050286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H6 family homeobox 3","termid":"PBO:0050286"}


id: PBO:0050026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA-DQA1 antisense RNA 1","termid":"PBO:0050026"}


id: GO:0032627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-23 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-23 production","secondary_identifiers":["GO:0042240","GO:0072621"],"synonyms":[{"name":"IL-23 production","type":"exact"},{"name":"interleukin-23 biosynthetic process","type":"narrow"},{"name":"interleukin-23 secretion","type":"narrow"}],"termid":"GO:0032627"}


id: MONDO:0015467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis, Philadelphia type is a form of syndromic craniosynostosis, characterized by sagittal/dolichocephalic head shape with a relatively normal facial appearance and complete soft tissue syndactyly of hand and foot. Transmission is autosomal dominant with variable expression of the hand findings, and incomplete penetrance of the sagittal craniosynostosis. Craniosynostosis, Philadelphia type has been suggested to share the same etiology as syndactyly type 1A.","definition_xrefs":["Orphanet:1527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis, Philadelphia type","secondary_identifiers":["MESH:C563368","GARD:1601","icd11.foundation:234032200","UMLS:C1832590","MEDGEN:321988","SCTID:720818003"],"termid":"MONDO:0015467","xrefs":{"Monarch":{"xref_id":"0015467"}}}


id: MONDO:0030933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 37","secondary_identifiers":["UMLS:C5543064","GARD:16434","MEDGEN:1786742","OMIM:619185"],"synonyms":[{"name":"JBTS37","type":"exact"},{"name":"Joubert syndrome 37","type":"exact"}],"termid":"MONDO:0030933","xrefs":{"Monarch":{"xref_id":"0030933"}}}


id: GO:0070454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heme biosynthetic process","termid":"GO:0070453"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"negatively_regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"negative regulation of heme biosynthetic process","synonyms":[{"name":"down regulation of heme biosynthetic process","type":"exact"},{"name":"down-regulation of heme biosynthetic process","type":"exact"},{"name":"downregulation of heme biosynthetic process","type":"exact"},{"name":"inhibition of heme biosynthetic process","type":"narrow"},{"name":"negative regulation of haem biosynthetic process","type":"exact"},{"name":"negative regulation of heme anabolism","type":"exact"},{"name":"negative regulation of heme biosynthesis","type":"exact"},{"name":"negative regulation of heme formation","type":"exact"},{"name":"negative regulation of heme synthesis","type":"exact"}],"termid":"GO:0070454"}


id: GO:0140226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transient cleavage and passage of individual RNA strands or double helices through one another, resulting a topological transformation in RNA.","definition_xrefs":["PMID:23912945","PMID:27257063","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid conformation isomerase activity","termid":"GO:0120545"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"RNA topoisomerase activity","termid":"GO:0140226"}


id: PBO:0015263
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDRC and RITS complexes associate together, and with noncoding centromeric RNA in a Dcr1 (hence siRNA) and Clr4 dependent manner","termid":"PBO:0015263"}


id: GO:2000831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of steroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of steroid hormone secretion","termid":"GO:2000831"}


id: FYPO:0003801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at an origin of replication is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased chromatin binding at replication origin","synonyms":[{"name":"decreased chromatin binding at origin of replication","type":"exact"},{"name":"reduced chromatin binding at replication origin","type":"exact"}],"termid":"FYPO:0003801"}


id: MONDO:0016127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"bacterial myositis","secondary_identifiers":["MEDGEN:538237","Orphanet:206994","GARD:20378","icd11.foundation:1277815767","SCTID:30330001","UMLS:C0263979"],"termid":"MONDO:0016127","xrefs":{"Monarch":{"xref_id":"0016127"}}}


id: GO:0051593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a folic acid stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to folic acid","synonyms":[{"name":"cellular response to folate","type":"exact"},{"name":"cellular response to vitamin B9","type":"exact"}],"termid":"GO:0051593"}


id: GO:0031835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a substance P receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurokinin receptor binding","termid":"GO:0031834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"substance P receptor binding","synonyms":[{"name":"neurokinin-1 receptor binding","type":"exact"},{"name":"substance P receptor ligand","type":"narrow"}],"termid":"GO:0031835"}


id: GO:0071265
data:
  {"annotated_genes":["SJAG_00309","SJAG_00881","SJAG_03881","SJAG_01404","SJAG_03671","SJAG_02290","SJAG_04425","SJAG_02293","SJAG_00395","SJAG_03614","SJAG_02972","SJAG_02689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69932,62031,113073,66749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[102580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[82116,78676,59106,79602,81028,80157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[100418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methionine biosynthetic process","termid":"GO:0009086"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00395":null,"SJAG_00881":null,"SJAG_01404":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03881":null,"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"L-methionine anabolism","type":"exact"},{"name":"L-methionine biosynthesis","type":"exact"},{"name":"L-methionine formation","type":"exact"},{"name":"L-methionine synthesis","type":"exact"}],"termid":"GO:0071265","terms_by_termid":{"GO:0019280":null,"GO:0019284":null,"GO:0019509":null,"GO:0071266":null}}


id: GO:0001665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetylneuraminate + glycano-(1->3)-(N-acetyl-alpha-D-galactosaminyl)-glycoprotein = CMP + glycano-[(2->6)-alpha-N-acetylneuraminyl]-(N-acetyl-D-galactosaminyl)-glycoprotein.","definition_xrefs":["EC:2.4.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9603991","Reactome:R-HSA-9846305","MetaCyc:2.4.99.3-RXN","Reactome:R-HSA-4084980","RHEA:11136"],"synonyms":[{"name":"GalNAc alpha-2,6-sialyltransferase I activity","type":"related"}],"termid":"GO:0001665"}


id: PBO:0077338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 74B","termid":"PBO:0077338"}


id: PBO:0076259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SVIL antisense RNA 1","termid":"PBO:0076259"}


id: MONDO:0030518
data:
  {"annotated_genes":["SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87939],"is_not":false,"summary":null,"term":"MONDO:0030518"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 9, nonphotosensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619692","MEDGEN:1794268","UMLS:C5562058"],"synonyms":[{"name":"TTD9","type":"exact"}],"termid":"MONDO:0030518","terms_by_termid":{"MONDO:0030518":null},"xrefs":{"Monarch":{"xref_id":"0030518"}}}


id: GO:0010649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:dph","GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"regulates","term_name":"cell communication by electrical coupling","termid":"GO:0010644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"}


id: MOD:01788
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal L-histidine residue to histidine immonium ion.","definition_xrefs":["PubMed:18688235","PubMed:17074506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine immonium ion","synonyms":[{"name":"2-(1H-imidazolyl)ethaniminium","type":"exact"}],"termid":"MOD:01788"}


id: MONDO:0007044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant skeletal dysplasia caused by mutation(s) in the PRKAR1A gene, encoding cAMP-dependent protein kinase type I-alpha regulatory subunit. It is characterized by short stature, brachydactyly, and characteristic facial features. Resistance to multiple hormones is a common finding.","definition_xrefs":["NCIT:C136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrodysostosis","termid":"MONDO:0019797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Acrodysostosis 1 with or without hormone resistance","secondary_identifiers":["UMLS:C3276228","GARD:15030","MEDGEN:477858","OMIM:101800"],"synonyms":[{"name":"ACRDYS1","type":"related"},{"name":"ADOHR","type":"exact"},{"name":"Acrodysostosis 1","type":"exact"},{"name":"Acrodysostosis 1 with or without hormone resistance","type":"exact"},{"name":"Acrodysostosis 1, with or without hormone resistance","type":"exact"}],"termid":"MONDO:0007044","xrefs":{"Monarch":{"xref_id":"0007044"}}}


id: PBO:0089739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS complex subunit Vac7","termid":"PBO:0089739"}


id: MONDO:0010785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternally inherited diabetes and deafness (MIDD) is a mitochondrial disorder characterized by maternally transmitted diabetes and sensorineural deafness.","definition_xrefs":["Orphanet:225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005015","MONDO:0004335"],"is_obsolete":false,"name":"maternally-inherited diabetes and deafness","secondary_identifiers":["OMIM:520000","UMLS:C0342289","MEDGEN:90979","MESH:C536246","NCIT:C131859","SCTID:237619009","GARD:4003","ICD9:250.80"],"synonyms":[{"name":"Ballinger Wallace syndrome","type":"related"},{"name":"Ballinger-Wallace syndrome","type":"related"},{"name":"MIDD","type":"exact"},{"name":"Niddm with deafness","type":"related"},{"name":"diabetes and deafness, maternally inherited","type":"related"},{"name":"diabetes mellitus type II with deafness","type":"related"},{"name":"diabetes mellitus, type II, with deafness","type":"related"},{"name":"diabetes-deafness syndrome, maternally Transmitted","type":"related"},{"name":"maternally inherited diabetes and deafness","type":"related"},{"name":"mitochondrial diabetes","type":"exact"},{"name":"noninsulin-dependent diabetes mellitus with deafness","type":"related"}],"termid":"MONDO:0010785","xrefs":{"Monarch":{"xref_id":"0010785"}}}


id: PBO:0053117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 6","termid":"PBO:0053117"}


id: MONDO:0005279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The obstruction of the pulmonary artery or one of its branches by an embolus, sometimes associated with infarction of the lung.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary embolism","secondary_identifiers":["MEDGEN:11027","NCIT:C50713","MESH:D011655","EFO:0003827","DOID:9477","UMLS:C0034065","HP:0002204","SCTID:59282003","ICD9:415.19"],"synonyms":[{"name":"embolism, pulmonary","type":"exact"},{"name":"pulmonary artery embolism","type":"exact"},{"name":"pulmonary embolism","type":"exact"},{"name":"pulmonary embolism (disease)","type":"exact"},{"name":"pulmonary embolus","type":"exact"}],"termid":"MONDO:0005279","xrefs":{"Monarch":{"xref_id":"0005279"}}}


id: MONDO:0032576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0032576 (obsolete MONDO:0032576)","termid":"MONDO:0032576","xrefs":{"Monarch":{"xref_id":"0032576"}}}


id: MONDO:0020679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hearing loss caused by impaired transmission of signals from the external auditory canal or middle ear to the cochlea.","definition_xrefs":["NCIT:C27645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conductive hearing loss disorder","secondary_identifiers":["MEDGEN:9163","SCTID:44057004","UMLS:C0018777"],"synonyms":[{"name":"conductive deafness","type":"exact"},{"name":"conductive hearing loss","type":"exact"}],"termid":"MONDO:0020679","xrefs":{"Monarch":{"xref_id":"0020679"}}}


id: GO:1903973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to macrophage colony-stimulating factor stimulus.","definition_xrefs":["GOC:BHF","PMID:19100238","GOC:TermGenie","GOC:nc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to macrophage colony-stimulating factor","termid":"GO:1903970"},{"relation_name":"is_a","term_name":"regulation of cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:1903972"},{"relation_name":"negatively_regulates","term_name":"cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:0036006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to macrophage colony-stimulating factor stimulus","synonyms":[{"name":"down regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"down regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"down regulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"down-regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"down-regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"down-regulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"downregulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"downregulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"downregulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"inhibition of cellular response to M-CSF stimulus","type":"narrow"},{"name":"inhibition of cellular response to macrophage colony-stimulating factor","type":"narrow"},{"name":"inhibition of cellular response to macrophage colony-stimulating factor stimulus","type":"narrow"},{"name":"negative regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"negative regulation of cellular response to macrophage colony-stimulating factor","type":"exact"}],"termid":"GO:1903973"}


id: PBO:0062865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 3","termid":"PBO:0062865"}


id: PBO:0054659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2065","termid":"PBO:0054659"}


id: PR:O14356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tor1 gene.","definition_xrefs":["UniProtKB:O14356","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase tor1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.10c","synonyms":[{"name":"PI3-kinase tor1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K tor1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase tor1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tor1","type":"exact"}],"termid":"PR:O14356"}


