# terms

id: GO:0004482
data:
  {"annotated_genes":["SJAG_04034"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74118],"is_not":false,"summary":null,"term":"GO:0004482"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + G(5')pppR-RNA = S-adenosyl-L-homocysteine + m7G(5')pppR-RNA. m7G(5')pppR-RNA is mRNA containing an N7-methylguanine cap; R may be guanosine or adenosine.","definition_xrefs":["EC:2.1.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04034":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0140098","GO:0016741"],"is_obsolete":false,"name":"mRNA 5'-cap (guanine-N7-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9684016","Reactome:R-HSA-9830848","Reactome:R-HSA-9694492","Reactome:R-HSA-9694737","Reactome:R-HSA-9684017","Reactome:R-HSA-77090","Reactome:R-HSA-9684018","Reactome:R-HSA-9694476","MetaCyc:MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:mRNA (guanine-7-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:mRNA (guanine-N7-)-methyltransferase activity","type":"related"},{"name":"guanine-7-methyltransferase activity","type":"related"},{"name":"messenger RNA guanine 7-methyltransferase activity","type":"related"},{"name":"messenger ribonucleate guanine 7-methyltransferase activity","type":"related"}],"termid":"GO:0004482","terms_by_termid":{"GO:0004482":null}}


id: GO:0060573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of the identity of a cell in a field of cells that is being instructed as to how to differentiate. Once specification has taken place, that cell will be committed to differentiate down a specific pathway if left in its normal environment.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate specification involved in pattern specification","termid":"GO:0060573"}


id: GO:1900801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cspyrone B1.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"cspyrone B1 metabolic process","termid":"GO:1900800"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cspyrone B1 catabolic process","synonyms":[{"name":"cspyrone B1 breakdown","type":"exact"},{"name":"cspyrone B1 catabolism","type":"exact"},{"name":"cspyrone B1 degradation","type":"exact"}],"termid":"GO:1900801"}


id: GO:0061221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric mesenchymal tissue are generated and organized. Mesonephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchyme morphogenesis","termid":"GO:0061221"}


id: PBO:0026638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_interphase","termid":"PBO:0026638"}


id: MONDO:0010042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic diplegia and intellectual disability","secondary_identifiers":["MESH:C537481","MEDGEN:376526","UMLS:C1849139","OMIM:270600"],"synonyms":[{"name":"hereditary spastic diplegia with intellectual disability","type":"related"},{"name":"hereditary spastic diplegia with mental retardation","type":"related"},{"name":"spastic diplegia and intellectual disability","type":"exact"},{"name":"spastic diplegia and mental retardation","type":"exact"},{"name":"spastic diplegia infantile type","type":"related"},{"name":"spastic diplegia, infantile type","type":"related"}],"termid":"MONDO:0010042","xrefs":{"Monarch":{"xref_id":"0010042"}}}


id: PR:O42922
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16A3.17c gene.","definition_xrefs":["UniProtKB:O42922","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C16A3.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.17c","synonyms":[{"name":"Spom972h-SPBC16A3.17c","type":"exact"}],"termid":"PR:O42922"}


id: GO:0004057
data:
  {"annotated_genes":["SJAG_02705"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73952],"is_not":false,"summary":null,"term":"GO:0004057"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-terminal L-alpha-aminoacyl-[protein] + L-arginyl-tRNA(Arg) = H+ + N-terminal L-arginyl-L-amino acid-[protein] + tRNA(Arg).","definition_xrefs":["RHEA:10208","PMID:16492767","PMID:9858543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02705":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0003674","GO:0003824","GO:0140096","GO:0016746","GO:0140101"],"is_obsolete":false,"name":"arginyl-tRNA--protein transferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ARGINYLTRANSFERASE-RXN","EC:2.3.2.8","GO:0042172"],"synonyms":[{"name":"arginine transferase activity","type":"broad"},{"name":"arginyl-tRNA protein transferase activity","type":"exact"},{"name":"arginyltransferase activity","type":"broad"}],"termid":"GO:0004057","terms_by_termid":{"GO:0004057":null}}


id: PBO:0080449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 10 like","termid":"PBO:0080449"}


id: GO:0032825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell activation","termid":"GO:0032816"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte differentiation","termid":"GO:0045621"},{"relation_name":"positively_regulates","term_name":"natural killer cell differentiation","termid":"GO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell differentiation","synonyms":[{"name":"activation of natural killer cell differentiation","type":"narrow"},{"name":"positive regulation of NK cell differentiation","type":"exact"},{"name":"positive regulation of natural killer cell development","type":"related"},{"name":"stimulation of natural killer cell differentiation","type":"narrow"},{"name":"up regulation of natural killer cell differentiation","type":"exact"},{"name":"up-regulation of natural killer cell differentiation","type":"exact"},{"name":"upregulation of natural killer cell differentiation","type":"exact"}],"termid":"GO:0032825"}


id: PBO:0016073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial cortical node protein Nod1","termid":"PBO:0016073"}


id: GO:1900919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of octadecene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of octadecene metabolic process","termid":"GO:1900917"},{"relation_name":"positively_regulates","term_name":"octadecene metabolic process","termid":"GO:1900681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of octadecene metabolic process","synonyms":[{"name":"activation of octadecene metabolic process","type":"narrow"},{"name":"activation of octadecene metabolism","type":"narrow"},{"name":"positive regulation of octadecene metabolism","type":"related"},{"name":"up regulation of octadecene metabolic process","type":"exact"},{"name":"up regulation of octadecene metabolism","type":"related"},{"name":"up-regulation of octadecene metabolic process","type":"exact"},{"name":"up-regulation of octadecene metabolism","type":"related"},{"name":"upregulation of octadecene metabolic process","type":"exact"},{"name":"upregulation of octadecene metabolism","type":"related"}],"termid":"GO:1900919"}


id: GO:0043786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phenylpropanoate + NAD+ = (E)-cinnamate + NADH + H+.","definition_xrefs":["PMID:10849007","RHEA:50944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cinnamate reductase activity","termid":"GO:0043786"}


id: GO:0071233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-leucine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to L-leucine","termid":"GO:0043201"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-leucine","synonyms":[{"name":"cellular response to leucine","type":"broad"}],"termid":"GO:0071233"}


id: GO:0040005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attaching of a chitin-containing cuticle to the epithelium underlying it. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle attachment to epithelium","synonyms":[{"name":"cuticular attachment to epithelium","type":"broad"}],"termid":"GO:0040005"}


id: GO:0071892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell activation process that occurs in thrombocytes and consists of a series of progressive, overlapping events including shape change, adhesiveness, and aggregation, which, when carried through to completion, lead to the formation of a stable hemostatic plug. Thrombocytes are nucleated cells found in non-mammalian vertebrates and are involved in hemostasis. They are the functional equivalent of the non-nucleated platelets found in mammals.","definition_xrefs":["GOC:mah","GOC:lb","PMID:10606877","PMID:15634265","PMID:20180901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thrombocyte activation","synonyms":[{"name":"blood coagulation, thrombocyte activation","type":"exact"}],"termid":"GO:0071892"}


id: PBO:0030096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_methionine_nitrogen_source","termid":"PBO:0030096"}


id: GO:0010674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb","PMID:8618927"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (obsolete GO:0010674)","synonyms":[{"name":"activation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter, meiotic","type":"exact"},{"name":"positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0010674"}


id: MONDO:0013406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the RAX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 6","secondary_identifiers":["MESH:C563674","MEDGEN:462410","OMIM:613757","UMLS:C3151060","DOID:0110018"],"synonyms":[{"name":"ARMD6","type":"exact"},{"name":"RAX2 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 6","type":"exact"},{"name":"age-related macular degeneration caused by mutation in RAX2","type":"exact"},{"name":"macular Degeneration, age-related, type 6","type":"exact"},{"name":"macular degeneration, age-related, 6","type":"related"}],"termid":"MONDO:0013406","xrefs":{"Monarch":{"xref_id":"0013406"}}}


id: PBO:0045039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIX domain containing 1","termid":"PBO:0045039"}


id: MONDO:0003526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lung giant cell carcinoma (obsolete MONDO:0003526)","termid":"MONDO:0003526","xrefs":{"Monarch":{"xref_id":"0003526"}}}


id: PBO:0067467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 596, pseudogene","termid":"PBO:0067467"}


id: PBO:0048758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2A pseudogene 1","termid":"PBO:0048758"}


id: FYPO:0002602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation during mitotic S phase","synonyms":[{"name":"decreased histone H2A phosphorylation during mitotic S phase during vegetative growth","type":"exact"},{"name":"reduced histone H2A phosphorylation during mitotic S phase","type":"exact"}],"termid":"FYPO:0002602"}


id: PBO:0086264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates ubiquitination of Rsp5p; has a WW domain consensus motif of PPPSY (residues 131-135) that mediates binding of Rsp5p to Ubp2p; contains an UBA domain; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086264"}


id: PR:000050481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2-specific protein kinase fin1 (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Ser-377, Ser-526, and Ser-698 of the amino acid sequence represented by UniProtKB:O13839. Example: UniProtKB:O13839, Ser-377/Ser-526/Ser-698, MOD:00046.","definition_xrefs":["PMID:22684255","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2-specific protein kinase fin1 (Schizosaccharomyces pombe)","termid":"PR:000050480"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fin1/Phos(S377,S526,S698)","pombase_gene_id":"SPAC19E9.02","synonyms":[{"name":"PomBase_original_PRO_term_name: G2-specific protein kinase fin1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-fin1/Phos:1","type":"exact"},{"name":"UniProtKB:O13839, Ser-377/Ser-526/Ser-698, MOD:00046","type":"narrow"},{"name":"fin1/Phos(S377,S526,S698)","type":"exact"}],"termid":"PR:000050481"}


id: PBO:0043208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 1","termid":"PBO:0043208"}


id: MONDO:0013444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the NEK8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 9","secondary_identifiers":["UMLS:C3151188","MEDGEN:462538","OMIM:613824","DOID:0111120"],"synonyms":[{"name":"NEK8 nephronophthisis (disease)","type":"exact"},{"name":"NPHP9","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in NEK8","type":"exact"},{"name":"nephronophthisis 9","type":"exact"},{"name":"nephronophthisis type 9","type":"exact"}],"termid":"MONDO:0013444","xrefs":{"Monarch":{"xref_id":"0013444"}}}


id: PBO:0065375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 3","termid":"PBO:0065375"}


id: MONDO:0013323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cranioectodermal dysplasia in which the cause of the disease is a mutation in the WDR35 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranioectodermal dysplasia","termid":"MONDO:0009032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005497","MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"cranioectodermal dysplasia 2","secondary_identifiers":["GARD:15680","OMIM:613610","DOID:0080804","MEDGEN:462224","UMLS:C3150874"],"synonyms":[{"name":"CED2","type":"related"},{"name":"CRANIOECTODERMAL dysplasia 2","type":"related"},{"name":"Cranioectodermal dysplasia type 2","type":"exact"},{"name":"WDR35 cranioectodermal dysplasia","type":"exact"},{"name":"WDR35-related cranioectodermal dysplasia","type":"exact"},{"name":"cranioectodermal dysplasia 2","type":"exact"},{"name":"cranioectodermal dysplasia caused by mutation in WDR35","type":"exact"}],"termid":"MONDO:0013323","xrefs":{"Monarch":{"xref_id":"0013323"}}}


id: MONDO:0009119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diverticulosis, small-intestinal","secondary_identifiers":["MESH:C565620","MEDGEN:341730","UMLS:C1857228","OMIM:223320"],"synonyms":[{"name":"diverticulosis, small-intestinal","type":"exact"}],"termid":"MONDO:0009119","xrefs":{"Monarch":{"xref_id":"0009119"}}}


id: MONDO:1010097
data:
  {"annotated_genes":["SJAG_02163"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044326"},{"annotations":[88590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013468"}]},"cv_name":"mondo","definition":"Any neurological disorder in which the cause of the disease is a mutation in the DHDDS gene.","definition_xrefs":["PMID:34034154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02163":null},"genotype_count":0,"is_obsolete":false,"name":"DHDDS-related syndrome","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"progressive myoclonus ataxia","type":"broad"}],"termid":"MONDO:1010097","terms_by_termid":{"MONDO:0013468":null,"MONDO:0044326":null},"xrefs":{"Monarch":{"xref_id":"1010097"}}}


id: PBO:0050563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRG pseudogene 1","termid":"PBO:0050563"}


id: MONDO:0000448
data:
  {"annotated_genes":["SJAG_02398","SJAG_01671","SJAG_03163","SJAG_01895","SJAG_03920","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[88854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[88764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[87468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[89000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm arising from paraganglia located along the sympathetic or parasympathetic nerves. Infrequently, it may arise outside the usual distribution of the sympathetic and parasympathetic paraganglia. Tumors arising from the adrenal gland medulla are called pheochromocytomas. Morphologically, paragangliomas usually display a nesting (Zellballen) growth pattern. There are no reliable morphologic criteria to distinguish between benign and malignant paragangliomas. The only definitive indicator of malignancy is the presence of regional or distant metastases.","definition_xrefs":["NCIT:C3308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system neoplasm","termid":"MONDO:0002366"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03163":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"paraganglioma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D010235","ONCOTREE:PGNG","SCTID:127027008","MEDGEN:10571","UMLS:C0030421","OMIMPS:168000","ICD9:239.7","ICDO:8680/1","DOID:0050773","EFO:1000453"],"synonyms":[{"name":"Paraganglionic neoplasm","type":"exact"},{"name":"Paraganglionic tumor","type":"exact"},{"name":"Paraganglionic tumour","type":"exact"},{"name":"chemodectoma","type":"narrow"},{"name":"neoplasm of paraganglion","type":"exact"},{"name":"neoplasm of the paraganglion","type":"exact"},{"name":"paraganglioma","type":"exact"},{"name":"paragangliomas","type":"exact"},{"name":"paraganglion neoplasm","type":"exact"},{"name":"paraganglion tumor","type":"exact"},{"name":"paraganglion tumour","type":"exact"},{"name":"tumor of paraganglion","type":"exact"},{"name":"tumor of the paraganglion","type":"exact"},{"name":"tumour of paraganglion","type":"exact"},{"name":"tumour of the paraganglion","type":"exact"}],"termid":"MONDO:0000448","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null,"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0000448"}}}


id: PBO:0050662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 1B","termid":"PBO:0050662"}


id: PBO:0069795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1081, pseudogene","termid":"PBO:0069795"}


id: PBO:0046617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group S71 member 2","termid":"PBO:0046617"}


id: PBO:0085348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase C; hydrolyzes phosphatidylinositol 4,5-biphosphate (PIP2) to generate the signaling molecules inositol 1,4,5-triphosphate (IP3) and 1,2-diacylglycerol (DAG); involved in regulating many cellular processes; Plc1p and inositol polyphosphates are required for acetyl-CoA homeostasis which regulates global histone acetylation","termid":"PBO:0085348"}


id: PBO:0066535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 2","termid":"PBO:0066535"}


id: FYPO:0003333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell is inviable, and grows in the form of a lemon prior to cell death. A lemon shape is defined mathematically as having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lemon-shaped cell","termid":"FYPO:0000224"},{"relation_name":"is_a","term_name":"lemon-shaped cell","termid":"FYPO:0000224"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"inviable lemon-shaped cell","synonyms":[{"name":"inviable lemon-shaped cell during mitotic cell cycle","type":"related"},{"name":"inviable lemon-shaped cell during vegetative growth","type":"exact"},{"name":"inviable lemon-shaped vegetative cell","type":"exact"},{"name":"lethal; lemon-shaped cell","type":"exact"}],"termid":"FYPO:0003333"}


id: GO:0071257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to electrical stimulus","synonyms":[{"name":"cellular response to electricity","type":"related"}],"termid":"GO:0071257"}


id: PBO:0086328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to tRNA synthetases; non-tagged protein is detected in purified mitochondria; null mutant is viable and displays elevated frequency of mitochondrial genome loss","termid":"PBO:0086328"}


id: PBO:0054656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2061","termid":"PBO:0054656"}


id: GO:0008163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete DDT resistance (obsolete GO:0008163)","synonyms":[{"name":"DDT resistance","type":"exact"}],"termid":"GO:0008163"}


id: GO:0102916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + (+)-piperitol + NADPH + O2 = (+)-sesamin + NADP + 2 H2O.","definition_xrefs":["PMID:16785429","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sesamin synthase activity (obsolete GO:0102916)","termid":"GO:0102916"}


id: PBO:0061454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 5 group A member 2","termid":"PBO:0061454"}


id: MONDO:0010616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypogonadism, male (obsolete MONDO:0010616)","termid":"MONDO:0010616","xrefs":{"Monarch":{"xref_id":"0010616"}}}


id: PBO:0067240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 311, pseudogene","termid":"PBO:0067240"}


id: PBO:0075120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 169","termid":"PBO:0075120"}


id: PBO:0111839
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kar3 subfamily","termid":"PBO:0111839"}


id: GO:0009609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiotic bacterium, a bacterium living in close physical association with another organism.","definition_xrefs":["GOC:hb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"},{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to symbiotic bacterium","synonyms":[{"name":"response to symbiotic bacteria","type":"exact"}],"termid":"GO:0009609"}


id: FYPO:0005692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from one or more microtubule organizing centers (MTOCs) is abnormal.","definition_xrefs":["PomBase:mah","PMID:19001497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"},{"relation_name":"is_a","term_name":"abnormal microtubule nucleation","termid":"FYPO:0007484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule nucleation during vegetative growth","synonyms":[{"name":"abnormal microtubule nucleation during mitotic cell cycle","type":"related"},{"name":"microtubule nucleation defects during vegetative growth","type":"exact"}],"termid":"FYPO:0005692"}


id: SO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the reduction of a the 3' UTR with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3_prime_UTR_variant","termid":"SO:0001624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3_prime_UTR_truncation","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"3 prime UTR truncation","type":"exact"},{"name":"Jannovar:3_prime_utr_truncation","type":"exact"},{"name":"snpEff:UTR_3_DELETED","type":"exact"}],"termid":"SO:0002015"}


id: GO:0141187
data:
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id: GO:0060827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of Wnt signaling through beta-catenin that results in the formation of the neural plate anterior/posterior pattern.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation (obsolete GO:0060827)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway through beta-catenin involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"regulation of canonical Wnt receptor signaling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060827"}


id: PBO:0051316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-118 (pseudogene)","termid":"PBO:0051316"}


id: GO:0007375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Internalization of the anterior midgut into the interior of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut invagination","termid":"GO:0007375"}


id: PBO:0000537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GatB/YqeY domain protein","termid":"PBO:0000537"}


id: GO:0008186
data:
  {"annotated_genes":["SJAG_02991","SJAG_02242","SJAG_01499","SJAG_04589","SJAG_02295","SJAG_00798","SJAG_03479","SJAG_00986","SJAG_04118","SJAG_00786","SJAG_02287","SJAG_03897","SJAG_04480","SJAG_00884","SJAG_00887","SJAG_04650","SJAG_03157","SJAG_02061","SJAG_01315","SJAG_04772","SJAG_00583","SJAG_00898","SJAG_04081","SJAG_01182","SJAG_00597","SJAG_04974","SJAG_02686","SJAG_04210","SJAG_03780","SJAG_02558","SJAG_04669","SJAG_03077","SJAG_00616","SJAG_04230","SJAG_16455","SJAG_03730","SJAG_05025","SJAG_02835","SJAG_02879","SJAG_03923","SJAG_03886","SJAG_02382","SJAG_03533","SJAG_01152","SJAG_03193","SJAG_05276","SJAG_00857"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117282,108379,109195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033679"},{"annotations":[75916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034458"},{"annotations":[101791,114514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033678"},{"annotations":[101792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032574"},{"annotations":[69040,105055,109232,78001,81007,77189,117430,81541,80859,101237,102547,109752,64580,78923,57197,70949,73582,62590,58079,60549,60923,77308,59042,80506,66439,75854,97883,57771,103331,82260,120705,89610,77294,118369,105456,73734,77227,73592,63073,62033,75914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003724"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of RNA, and it drives another reaction.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00583":null,"SJAG_00597":null,"SJAG_00616":null,"SJAG_00786":null,"SJAG_00798":null,"SJAG_00857":null,"SJAG_00884":null,"SJAG_00887":null,"SJAG_00898":null,"SJAG_00986":null,"SJAG_01152":null,"SJAG_01182":null,"SJAG_01315":null,"SJAG_01499":null,"SJAG_02061":null,"SJAG_02242":null,"SJAG_02287":null,"SJAG_02295":null,"SJAG_02382":null,"SJAG_02558":null,"SJAG_02686":null,"SJAG_02835":null,"SJAG_02879":null,"SJAG_02991":null,"SJAG_03077":null,"SJAG_03157":null,"SJAG_03193":null,"SJAG_03479":null,"SJAG_03533":null,"SJAG_03730":null,"SJAG_03780":null,"SJAG_03886":null,"SJAG_03897":null,"SJAG_03923":null,"SJAG_04081":null,"SJAG_04118":null,"SJAG_04210":null,"SJAG_04230":null,"SJAG_04480":null,"SJAG_04589":null,"SJAG_04650":null,"SJAG_04669":null,"SJAG_04772":null,"SJAG_04974":null,"SJAG_05025":null,"SJAG_05276":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"ATP-dependent activity, acting on RNA","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-9772351","GO:0004010","Reactome:R-HSA-9770847"],"synonyms":[{"name":"ATPase activity, acting on RNA","type":"exact"},{"name":"ATPase, acting on RNA","type":"exact"},{"name":"RNA-dependent ATPase activity","type":"exact"},{"name":"RNA-dependent adenosinetriphosphatase activity","type":"exact"}],"termid":"GO:0008186","terms_by_termid":{"GO:0003724":null,"GO:0032574":null,"GO:0033678":null,"GO:0033679":null,"GO:0034458":null}}


id: PR:Q9P7H0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01976","PANTHER:PTHR23105:SF12","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.10c","secondary_identifiers":["UniProtKB:Q9P7H0"],"synonyms":[{"name":"H/ACA snoRNP protein NHP2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"P17-nhp2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NHP2","type":"exact"},{"name":"high mobility group-like nuclear protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7H0"}


id: PBO:0046525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum to nucleus signaling 2","termid":"PBO:0046525"}


id: GO:1903690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of wound healing, spreading of epidermal cells.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:18394891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of wound healing","termid":"GO:0061045"},{"relation_name":"is_a","term_name":"regulation of wound healing, spreading of epidermal cells","termid":"GO:1903689"},{"relation_name":"negatively_regulates","term_name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of wound healing, spreading of epidermal cells","synonyms":[{"name":"down regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"down-regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"downregulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"inhibition of wound healing, spreading of epidermal cells","type":"narrow"}],"termid":"GO:1903690"}


id: GO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase during which the polar microtubules elongate and the two poles of the spindle move farther apart as part of mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic anaphase","termid":"GO:0000090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000090"},{"rel_name":"part_of","termid":"GO:0000087"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000087","GO:0000090"],"is_obsolete":false,"name":"mitotic anaphase B","termid":"GO:0000092"}


id: PBO:0057004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 98","termid":"PBO:0057004"}


id: PBO:0085068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonfunctional homolog of Gpm1p phosphoglycerate mutase; if functional, would convert 3-phosphoglycerate to 2-phosphoglycerate in glycolysis; GPM3 has a paralog, GPM2, that arose from the whole genome duplication","termid":"PBO:0085068"}


id: GO:0003774
data:
  {"annotated_genes":["SJAG_04001","SJAG_04745","SJAG_02848","SJAG_03011","SJAG_00042","SJAG_03703","SJAG_00773","SJAG_00031","SJAG_01546","SJAG_02384","SJAG_00930","SJAG_02431","SJAG_02336","SJAG_00332","SJAG_01613","SJAG_01297","SJAG_00938","SJAG_00851","SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061791"},{"annotations":[104691,101869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990606"},{"annotations":[71933,78447,81392,76139,72870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000146"},{"annotations":[62052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003777"},{"annotations":[96658,67402,98671,59426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008569"},{"annotations":[63024,79603,80642,77598,105472,105673,77725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"Generation of force resulting in movement, for example along a microfilament or microtubule, or in torque resulting in membrane scission or rotation of a flagellum. The energy required is obtained either from the hydrolysis of a nucleoside triphosphate or by an electrochemical proton gradient (proton-motive force).","definition_xrefs":["GOC:mah","PMID:29716949","GOC:vw","PMID:11242086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00042":null,"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_00938":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02384":null,"SJAG_02431":null,"SJAG_02848":null,"SJAG_03011":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04745":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"cytoskeletal motor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-1861595"],"synonyms":[{"name":"motor activity","type":"broad"}],"termid":"GO:0003774","terms_by_termid":{"GO:0000146":null,"GO:0003777":null,"GO:0008569":null,"GO:0008574":null,"GO:0061791":null,"GO:1990606":null}}


id: PBO:0054580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1982","termid":"PBO:0054580"}


id: MONDO:0018404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic male infertility.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic male infertility (obsolete MONDO:0018404)","secondary_identifiers":["Orphanet:399980"],"synonyms":[{"name":"rare genetic male infertility","type":"exact"}],"termid":"MONDO:0018404","xrefs":{"Monarch":{"xref_id":"0018404"}}}


id: PBO:0038325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immersed_in","termid":"PBO:0038325"}


id: GO:0120214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of histidine biosynthetic process.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of histidine biosynthetic process","termid":"GO:0120213"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"L-histidine biosynthetic process","termid":"GO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of histidine biosynthetic process","synonyms":[{"name":"down regulation of histidine anabolism","type":"exact"},{"name":"down regulation of histidine biosynthesis","type":"exact"},{"name":"down regulation of histidine biosynthetic process","type":"exact"},{"name":"down regulation of histidine formation","type":"exact"},{"name":"down regulation of histidine synthesis","type":"exact"},{"name":"down-regulation of histidine anabolism","type":"exact"},{"name":"down-regulation of histidine biosynthesis","type":"exact"},{"name":"down-regulation of histidine biosynthetic process","type":"exact"},{"name":"down-regulation of histidine formation","type":"exact"},{"name":"down-regulation of histidine synthesis","type":"exact"},{"name":"downregulation of histidine anabolism","type":"exact"},{"name":"downregulation of histidine biosynthesis","type":"exact"},{"name":"downregulation of histidine biosynthetic process","type":"exact"},{"name":"downregulation of histidine formation","type":"exact"},{"name":"downregulation of histidine synthesis","type":"exact"},{"name":"inhibition of histidine anabolism","type":"narrow"},{"name":"inhibition of histidine biosynthesis","type":"narrow"},{"name":"inhibition of histidine biosynthetic process","type":"narrow"},{"name":"inhibition of histidine formation","type":"narrow"},{"name":"inhibition of histidine synthesis","type":"narrow"},{"name":"negative regulation of histidine anabolism","type":"exact"},{"name":"negative regulation of histidine biosynthesis","type":"exact"},{"name":"negative regulation of histidine formation","type":"exact"},{"name":"negative regulation of histidine synthesis","type":"exact"}],"termid":"GO:0120214"}


id: MONDO:0016981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"disorder of thiamine metabolism and transport","termid":"MONDO:0017578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"infantile spams-psychomotor retardation-progressive brain atrophy-basal ganglia disease syndrome","secondary_identifiers":["MEDGEN:1675231","GARD:20899","Orphanet:263410","UMLS:C5190692"],"synonyms":[{"name":"infantile spasms-psychomotor retardation-progressive brain atrophy-basal ganglia disease syndrome","type":"related"}],"termid":"MONDO:0016981","xrefs":{"Monarch":{"xref_id":"0016981"}}}


id: MONDO:0043765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bilateral hearing loss caused by progressive degeneration of cochlear structures and central auditory pathways, typically associated with the aging process.","definition_xrefs":["NCIT:C116367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensorineural hearing loss disorder","termid":"MONDO:0020678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presbycusis","secondary_identifiers":["MEDGEN:10911","icd11.foundation:1569854675","SCTID:49526009","MESH:D011304","UMLS:C0033074"],"synonyms":[{"name":"ARHI","type":"exact"},{"name":"Presbycuses","type":"related"},{"name":"age-related hearing impairment","type":"exact"},{"name":"age-related hearing loss","type":"related"},{"name":"presbyacusia","type":"related"},{"name":"presbycusis","type":"exact"},{"name":"senile deafness","type":"related"}],"termid":"MONDO:0043765","xrefs":{"Monarch":{"xref_id":"0043765"}}}


id: PBO:0041875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic arginine sensor for mTORC1 subunit 2","termid":"PBO:0041875"}


id: PBO:0045919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB13 divergent transcript","termid":"PBO:0045919"}


id: PBO:0045532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 3","termid":"PBO:0045532"}


id: GO:0035504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of myosin light chain kinase activity.","definition_xrefs":["GOC:go_curators","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of myosin light chain kinase activity (obsolete GO:0035504)","termid":"GO:0035504"}


id: GO:0035803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of an egg coat, a specialized extracellular matrix that surrounds the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development.","definition_xrefs":["GOC:sart","GOC:bf","PMID:16944418","GOC:yaf","PMID:17163408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"egg coat formation","synonyms":[{"name":"VE formation","type":"narrow"},{"name":"ZP assembly","type":"narrow"},{"name":"vitelline envelope formation","type":"narrow"},{"name":"zona pellucida assembly","type":"narrow"}],"termid":"GO:0035803"}


id: PBO:0011126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin homolog Far8 (predicted)","termid":"PBO:0011126"}


id: PBO:0076492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell-interacting, activating receptor on myeloid cells 1","termid":"PBO:0076492"}


id: PR:Q10152
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1D4.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1D4.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.07c","synonyms":[{"name":"Spom972h-SPAC1D4.07c","type":"exact"}],"termid":"PR:Q10152"}


id: PATO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An affinity inhering in a tissue constituent by virtue of the bearer exhibiting a molecular interaction for acidic dyes under specific ph conditions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidophilic","termid":"PATO:0002418"}


id: PR:Q9UUF0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisome biogenesis factor 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23350:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome biogenesis factor 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.10","secondary_identifiers":["UniProtKB:Q9UUF0"],"synonyms":[{"name":"Spom972h-PEX10","type":"exact"},{"name":"peroxin-10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisomal biogenesis factor 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisome assembly protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi036","type":"related"}],"termid":"PR:Q9UUF0"}


id: GO:0007202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme phospolipase C as the result of The series of molecular signals generated as a consequence of a G protein-coupled receptor binding to its physiological ligand.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph","PMID:8280098"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of phospholipase C activity (obsolete GO:0007202)","synonyms":[{"name":"phospholipase C activation","type":"exact"}],"termid":"GO:0007202"}


id: PR:O94629
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sro1 gene.","definition_xrefs":["UniProtKB:O94629","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-responsive protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.11","synonyms":[{"name":"Spom972h-sro1","type":"exact"}],"termid":"PR:O94629"}


id: MONDO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epilepsy syndrome that is located in an area of the brain other than the temporal lobe.","definition_xrefs":["DOID:2544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"extratemporal epilepsy","secondary_identifiers":["NCIT:C7760","ICD9:345.80","MEDGEN:78737","SCTID:111498005","UMLS:C0270849"],"synonyms":[{"name":"extratemporal epilepsy","type":"exact"}],"termid":"MONDO:0002338","xrefs":{"Monarch":{"xref_id":"0002338"}}}


id: PBO:0064033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 67","termid":"PBO:0064033"}


id: SO:0001864
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif to which the S. pombe Sap1 protein binds. The consensus sequence is 5'-TARGCAGNTNYAACGMG-3'; it is found at the mating type locus, where it is important for mating type switching, and at replication fork barriers in rDNA repeats.","definition_xrefs":["PMID:16166653","PMID:7651412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sap1_recognition_motif","synonyms":[{"name":"Sap1 recognitions site","type":"exact"}],"termid":"SO:0001864"}


id: PBO:0060910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurite extension and migration factor","termid":"PBO:0060910"}


id: PBO:0038638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 4","termid":"PBO:0038638"}


id: PR:O13704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C13F5.05, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.05","synonyms":[{"name":"Spom972h-mpd1","type":"exact"}],"termid":"PR:O13704"}


id: PBO:0061115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 6","termid":"PBO:0061115"}


id: PBO:0116268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; strong preference for dsRNA; remodels RNP structure for efficient transcription termination; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may suppress transcription from cryptic initiation sites; promotes Mex67p-mediated nuclear export of mRNA by facilitating annealing with antisense RNAs to create dsRNAs; binds G-quadruplex (G4) nucleic acids","termid":"PBO:0116268"}


id: MONDO:1010651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelger-Huet anomaly that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelger-Huet anomaly, non-human animal","termid":"MONDO:1010077"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pelger-Huet anomaly, domestic cat","secondary_identifiers":["OMIA:000783-9685"],"termid":"MONDO:1010651","xrefs":{"Monarch":{"xref_id":"1010651"}}}


id: MONDO:1010898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurological disease characterized by ataxia, hypermetria, wide-base stance, and strabismus that occurs in cattle due to a sphingomyelinase deficiency resulting in the accumulation of sphingomyelin in neurons and macrophages.","definition_xrefs":["PMID:18424834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, cattle","termid":"MONDO:1010862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelinase deficiency, cattle","secondary_identifiers":["OMIA:001795-9913"],"synonyms":[{"name":"Niemann-Pick disease, type A, cattle","type":"related"}],"termid":"MONDO:1010898","xrefs":{"Monarch":{"xref_id":"1010898"}}}


id: MONDO:0003664
data:
  {"annotated_genes":["SJAG_05283","SJAG_01351","SJAG_00839","SJAG_01162","SJAG_04495","SJAG_00930","SJAG_04731","SJAG_01183","SJAG_03497","SJAG_03153","SJAG_00605","SJAG_04334","SJAG_04881","SJAG_00846","SJAG_02539","SJAG_02009","SJAG_00988","SJAG_02796","SJAG_04192","SJAG_01077","SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[87292,87293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009134"},{"annotations":[87336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007109"},{"annotations":[88227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008494"},{"annotations":[87297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[87139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012204"},{"annotations":[87742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[88046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[87515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[88902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[88018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[88694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[89163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859172"},{"annotations":[87307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012981"},{"annotations":[88300,88301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[88239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008493"},{"annotations":[87286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"},{"annotations":[88742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[87796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"},{"annotations":[87436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[87039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012700"},{"annotations":[89031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019107"},{"annotations":[87477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008165"},{"annotations":[87627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Anemia resulting from the premature destruction of the peripheral blood red cells. It may be congenital or it may be caused by infections, medications, or malignancies.","definition_xrefs":["NCIT:C34376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normocytic anemia","termid":"MONDO:0004139"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_00846":null,"SJAG_00930":null,"SJAG_00988":null,"SJAG_01077":null,"SJAG_01162":null,"SJAG_01183":null,"SJAG_01351":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02539":null,"SJAG_02796":null,"SJAG_03153":null,"SJAG_03497":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04731":null,"SJAG_04881":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1916","MESH:D000743","NANDO:2200636","SCTID:61261009","ICD10CM:D55-D59","UMLS:C0002878","DOID:583"],"synonyms":[{"name":"anaemia hemolytic","type":"exact"},{"name":"anemia hemolytic","type":"exact"},{"name":"anemia, hemolytic","type":"exact"},{"name":"hemolytic anemia","type":"exact"}],"termid":"MONDO:0003664","terms_by_termid":{"MONDO:0007109":null,"MONDO:0008165":null,"MONDO:0008493":null,"MONDO:0008494":null,"MONDO:0009113":null,"MONDO:0009134":null,"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010438":null,"MONDO:0010480":null,"MONDO:0012204":null,"MONDO:0012700":null,"MONDO:0012981":null,"MONDO:0012992":null,"MONDO:0013275":null,"MONDO:0014166":null,"MONDO:0014221":null,"MONDO:0019107":null,"MONDO:0019531":null,"MONDO:0859172":null},"xrefs":{"Monarch":{"xref_id":"0003664"}}}


id: PBO:0051779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing B2 pseudogene","termid":"PBO:0051779"}


id: FYPO:0007767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of thiabendazole binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:33925026","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased thiabendazole binding","synonyms":[{"name":"decreased TBZ binding","type":"exact"},{"name":"reduced TBZ binding","type":"exact"},{"name":"reduced thiabendazole binding","type":"exact"}],"termid":"FYPO:0007767"}


id: PBO:0085475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable Hsp40p co-chaperone; has a DnaJ-like domain and appears to be involved in ER-associated degradation of misfolded proteins containing a tightly folded cytoplasmic domain; inhibits replication of Brome mosaic virus in S. cerevisiae","termid":"PBO:0085475"}


id: PBO:0025541
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae VAM7","termid":"PBO:0025541"}


id: PBO:0042231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 3 (pseudogene)","termid":"PBO:0042231"}


id: PBO:0079979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 17","termid":"PBO:0079979"}


id: GO:0007557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone metabolic process","termid":"GO:0007556"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"regulates","term_name":"juvenile hormone biosynthetic process","termid":"GO:0006718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"regulation of juvenile hormone biosynthetic process","synonyms":[{"name":"regulation of juvenile hormone anabolism","type":"exact"},{"name":"regulation of juvenile hormone biosynthesis","type":"exact"},{"name":"regulation of juvenile hormone formation","type":"exact"},{"name":"regulation of juvenile hormone synthesis","type":"exact"}],"termid":"GO:0007557"}


id: PBO:0055358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2787","termid":"PBO:0055358"}


id: PBO:0047666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fukutin","termid":"PBO:0047666"}


id: MONDO:0003597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0003597 (obsolete MONDO:0003597)","termid":"MONDO:0003597","xrefs":{"Monarch":{"xref_id":"0003597"}}}


id: MONDO:0003166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pilocytic astrocytoma (obsolete MONDO:0003166)","termid":"MONDO:0003166","xrefs":{"Monarch":{"xref_id":"0003166"}}}


id: MONDO:0003795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the ovary and is characterized by the presence of small malignant cells. It includes small cell carcinoma, hypercalcemic type and small cell carcinoma, pulmonary type.","definition_xrefs":["NCIT:C27390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"ovarian neuroendocrine neoplasm","termid":"MONDO:0002481"},{"relation_name":"is_a","term_name":"ovarian carcinoma","termid":"MONDO:0005140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian small cell carcinoma","secondary_identifiers":["UMLS:C2212006","DOID:6179","EFO:1000431","GARD:10411","MEDGEN:389177","ONCOTREE:SCCO","Orphanet:370396"],"synonyms":[{"name":"SCCO","type":"exact"},{"name":"ovarian small cell NEC","type":"exact"},{"name":"ovarian small cell cancer","type":"exact"},{"name":"ovarian small cell carcinoma","type":"exact"},{"name":"ovarian small cell neuroendocrine carcinoma","type":"exact"},{"name":"ovary small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of ovary","type":"exact"},{"name":"small cell carcinoma of the ovary","type":"exact"},{"name":"small cell ovarian carcinoma","type":"exact"}],"termid":"MONDO:0003795","xrefs":{"Monarch":{"xref_id":"0003795"}}}


id: PBO:0117208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfite efflux transmembrane transporter Ssu3","termid":"PBO:0117208"}


id: GO:1900791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving shamixanthone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"shamixanthone metabolic process","synonyms":[{"name":"shamixanthone metabolism","type":"exact"}],"termid":"GO:1900791"}


id: PBO:0111817
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT1 subfamily","termid":"PBO:0111817"}


id: PBO:0049522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.P histone","termid":"PBO:0049522"}


id: MONDO:1011199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary chondrodysplasia in cattle associated with a variation in the FGFR3 gene.","definition_xrefs":["PMID:32239744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia FGFR3-related, cattle","secondary_identifiers":["OMIA:001703-9913"],"termid":"MONDO:1011199","xrefs":{"Monarch":{"xref_id":"1011199"}}}


id: PBO:0088023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP protein involved in splicing; interacts with the branchpoint-binding protein during the formation of the second commitment complex","termid":"PBO:0088023"}


id: MONDO:0012784
data:
  {"annotated_genes":["SJAG_00933"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88142],"is_not":false,"summary":null,"term":"MONDO:0012784"}]},"cv_name":"mondo","definition":"This syndrome is characterized by childhood-onset progressive ataxia and cerebellar atrophy.","definition_xrefs":["Orphanet:139485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"},{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0005244","MONDO:0004069","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive ataxia due to ubiquinone deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070241","MEDGEN:436985","UMLS:C2677589","MESH:C567436","OMIM:612016","GARD:10294","SCTID:725394006"],"synonyms":[{"name":"ARCA2","type":"exact"},{"name":"COQ10D4","type":"related"},{"name":"SCAR9","type":"exact"},{"name":"autosomal recessive ataxia due to coenzyme Q10 deficiency","type":"exact"},{"name":"autosomal recessive cerebellar ataxia type 2","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia 9","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia type 9","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, 4","type":"related"},{"name":"coenzyme Q10 deficiency, primary, type 4","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 9","type":"related"}],"termid":"MONDO:0012784","terms_by_termid":{"MONDO:0012784":null},"xrefs":{"Monarch":{"xref_id":"0012784"}}}


id: PBO:0059336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S7 pseudogene 1","termid":"PBO:0059336"}


id: FYPO:0004755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the minus ends of microtubules is abnormal.","definition_xrefs":["PMID:25987607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to microtubule minus-end","synonyms":[{"name":"abnormal protein localisation to microtubule minus-end","type":"exact"},{"name":"abnormal protein localization to microtubule minus end","type":"exact"},{"name":"abnormal protein localization to microtubule minus-end during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to microtubule minus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0004755"}


id: PBO:0031793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_cell_cycle_phase_transition","termid":"PBO:0031793"}


id: PBO:0004692
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.25","termid":"PBO:0004692"}


id: MONDO:0034661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic biliary atresia (obsolete MONDO:0034661)","secondary_identifiers":["Orphanet:498350"],"termid":"MONDO:0034661","xrefs":{"Monarch":{"xref_id":"0034661"}}}


id: PBO:0113188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity inorganic phosphate (Pi) transporter; acts upstream of Pho81p in regulation of PHO pathway; targeted to vacuole via AP-3 pathway; expression is independent of Pi concentration and Pho4p activity; contains 12 membrane-spanning segments; PHO87 has a paralog, PHO90, that arose from the whole genome duplication","termid":"PBO:0113188"}


id: FYPO:0005824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the permeability of the plasma membrane to one or more substances is greater than normal.","definition_xrefs":["PomBase:mah","PMID:27886462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane morphology during vegetative growth","termid":"FYPO:0000364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased plasma membrane permeability","synonyms":[{"name":"increased plasma membrane permeability during mitotic cell cycle","type":"related"},{"name":"increased plasma membrane permeability during vegetative growth","type":"exact"}],"termid":"FYPO:0005824"}


id: PBO:0071555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 20","termid":"PBO:0071555"}


id: MONDO:0002478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biphasic neoplasm that arises from the ovary or the testis. It is characterized by the presence of neoplastic germ cells and neoplastic sex cord-stromal cells. It includes the gonadoblastoma and mixed germ cell-sex cord stromal tumor, unclassifiable.","definition_xrefs":["NCIT:C5241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed germ cell-sex cord-stromal tumor","secondary_identifiers":["DOID:2996","UMLS:C1321220","MEDGEN:232941"],"synonyms":[{"name":"mixed germ cell-Sex cord neoplasm","type":"exact"},{"name":"mixed germ cell-Sex cord tumor","type":"exact"},{"name":"mixed germ cell-Sex cord tumour","type":"exact"},{"name":"mixed germ cell-Sex cord-stromal neoplasm","type":"exact"},{"name":"mixed germ cell-Sex cord-stromal tumor","type":"exact"},{"name":"mixed germ cell-Sex cord-stromal tumour","type":"exact"},{"name":"mixed germ cell-sex cord-stromal tumor (morphologic abnormality)","type":"exact"},{"name":"mixed germ cell-sex cord-stromal tumour (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002478","xrefs":{"Monarch":{"xref_id":"0002478"}}}


id: GO:0061390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the direction of cell growth.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"regulation of direction of cell growth","termid":"GO:0061389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of direction of cell growth","termid":"GO:0061390"}


id: PBO:0079574
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C","termid":"PBO:0079574"}


id: MONDO:0003931
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytoma that arises from the visual pathway and occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"optic nerve astrocytoma","termid":"MONDO:0003234"},{"relation_name":"excluded_subClassOf","term_name":"childhood optic nerve glioma","termid":"MONDO:0003932"},{"relation_name":"is_a","term_name":"childhood cerebral astrocytoma","termid":"MONDO:0004071"},{"relation_name":"is_a","term_name":"optic tract astrocytoma","termid":"MONDO:0024649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood optic tract astrocytoma","secondary_identifiers":["MEDGEN:232072","NCIT:C7534","UMLS:C1333014","DOID:6575"],"synonyms":[{"name":"childhood optic tract astrocytoma","type":"exact"},{"name":"childhood visual pathway astrocytoma","type":"exact"},{"name":"optic tract astrocytoma of childhood","type":"exact"},{"name":"paediatric optic tract astrocytoma","type":"exact"},{"name":"paediatric visual pathway astrocytoma","type":"exact"},{"name":"pediatric optic tract astrocytoma","type":"exact"},{"name":"pediatric visual pathway astrocytoma","type":"exact"}],"termid":"MONDO:0003931","xrefs":{"Monarch":{"xref_id":"0003931"}}}


id: SO:0002020
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Boundary elements are DNA motifs that prevent heterochromatin from spreading into neighboring euchromatic regions.","definition_xrefs":["PMID:24013502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulator","termid":"SO:0000627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"boundary_element","synonyms":[{"name":"boundary element","type":"exact"},{"name":"insulator","type":"related"}],"termid":"SO:0002020"}


id: PBO:0011154
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metachromatic leukodystrophy","termid":"PBO:0011154"}


id: PBO:0068209
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 516","termid":"PBO:0068209"}


id: PBO:0080313
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 77 pseudogene","termid":"PBO:0080313"}


id: FYPO:0001036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is delaminated, i.e. one or more of its layers peels off.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology during vegetative growth","termid":"FYPO:0000351"},{"relation_name":"is_a","term_name":"delaminated cell wall","termid":"FYPO:0002948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002946"],"is_obsolete":false,"name":"delaminated cell wall during vegetative growth","synonyms":[{"name":"delaminate cell wall during vegetative growth","type":"exact"},{"name":"delaminated cell wall during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001036"}


id: PBO:0057954
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3677 and MIR940 host gene","termid":"PBO:0057954"}


id: PBO:0075729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 9","termid":"PBO:0075729"}


id: PBO:0050197
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 14","termid":"PBO:0050197"}


id: GO:0021797
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"forebrain regionalization","termid":"GO:0021871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain anterior/posterior pattern specification","synonyms":[{"name":"forebrain anterior-posterior pattern specification","type":"exact"}],"termid":"GO:0021797"}


id: PBO:0002220
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase Sdh1 (predicted)","termid":"PBO:0002220"}


id: PBO:0054738
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2147","termid":"PBO:0054738"}


id: FYPO:0003513
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of hercynylcysteine sulfoxide measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide absent from cell","synonyms":[{"name":"hercynylcysteine sulphoxide absent from cell","type":"exact"}],"termid":"FYPO:0003513"}


id: PBO:0028524
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9K14_acetylation","termid":"PBO:0028524"}


id: PBO:0049166
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 8","termid":"PBO:0049166"}


id: GO:0101031
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id: GO:0010629
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id: MONDO:0001057
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metastasizing granular cell tumor that arises from the stomach.","definition_xrefs":["NCIT:C5484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"},{"relation_name":"is_a","term_name":"granular cell cancer","termid":"MONDO:0003252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"malignant gastric granular cell tumor","secondary_identifiers":["MEDGEN:233664","UMLS:C1334585","DOID:10536"],"synonyms":[{"name":"malignant gastric granular cell neoplasm","type":"exact"},{"name":"malignant gastric granular cell tumor","type":"exact"},{"name":"malignant granular cell neoplasm of stomach","type":"exact"},{"name":"malignant granular cell neoplasm of the stomach","type":"exact"},{"name":"malignant granular cell stomach neoplasm","type":"exact"},{"name":"malignant granular cell stomach tumor","type":"exact"},{"name":"malignant granular cell stomach tumour","type":"exact"},{"name":"malignant granular cell tumor of stomach","type":"exact"},{"name":"malignant granular cell tumor of the stomach","type":"exact"},{"name":"malignant granular cell tumour of stomach","type":"exact"},{"name":"malignant granular cell tumour of the stomach","type":"exact"}],"termid":"MONDO:0001057","xrefs":{"Monarch":{"xref_id":"0001057"}}}


id: GO:0047679
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine = D-arginine.","definition_xrefs":["MetaCyc:ARGININE-RACEMASE-RXN","EC:5.1.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"arginine racemase activity","secondary_identifiers":["RHEA:18069"],"termid":"GO:0047679"}


id: PBO:0081064
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CW-type and PWWP domain containing 1","termid":"PBO:0081064"}


id: GO:0035513
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id: PBO:0002005
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L20 (predicted)","termid":"PBO:0002005"}


id: PBO:0067067
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 93, pseudogene","termid":"PBO:0067067"}


id: PBHQ:001
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  {"annotation_feature_type":"gene","cv_name":"pombase_has_qualifier_range","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_qualifier_range","termid":"PBHQ:001"}


id: PBO:0081133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP14 zinc finger protein","termid":"PBO:0081133"}


id: PBO:0070791
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 21","termid":"PBO:0070791"}


id: MOD:01661
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to pyruvic acid.","definition_xrefs":["PubMed:10085076","PubMed:500639","PubMed:8464063","RESID:AA0127#TYR","PubMed:3042771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"pyruvic acid","termid":"MOD:01154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid (Tyr)","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Tyr)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:01661"}


id: PBO:0082817
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved mitochondrial protein of unknown function; processed by both mitochondrial processing peptidase and mitochondrial octapeptidyl aminopeptidase; gene contains the nested antisense gene NAG1","termid":"PBO:0082817"}


id: MOD:00756
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to 4-hydroxy-D-valine.","definition_xrefs":["RESID:AA0388","PubMed:15853325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-D-valine","synonyms":[{"name":"(2R,3Xi)-2-amino-4-hydroxy-3-methylbutanoic acid","type":"exact"},{"name":"4-hydroxy-D-valine","type":"exact"},{"name":"D-4HyVal","type":"exact"},{"name":"D-gamma-hydroxyvaline","type":"exact"},{"name":"MOD_RES D-4-hydroxyvaline","type":"exact"}],"termid":"MOD:00756"}


id: PBO:0087131
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein, component of the U1 snRNP protein; mutants are defective in meiotic recombination and in formation of viable spores, involved in the formation of DSBs through meiosis-specific splicing of REC107 pre-mRNA; Nam8p regulon embraces the meiotic pre-mRNAs of REC107, HFM1, AMA1 SPO22 and PCH2; the putative RNA binding domains RRM2 and RRM3 are required for Nam8p meiotic function","termid":"PBO:0087131"}


id: GO:0000225
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id: PBO:0090300
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Cwf7","termid":"PBO:0090300"}


id: GO:0043658
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A double-enveloped cell compartment, composed of the endosymbiont with its plasmalemma (as inner envelope) and an outer envelope (the perisymbiontic membrane) derived from the host cell.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host symbiosome","termid":"GO:0043658"}


id: PBO:0090244
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIK complex ubiquitin-protein ligase E3 subunit, Pmh1","termid":"PBO:0090244"}


id: PBO:0074320
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD9 intronic transcript 1","termid":"PBO:0074320"}


id: FYPO:0005451
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one of two different alleles of a gene is lost less frequently than normal after a double-strand break forms nearby.","definition_xrefs":["PMID:17724078","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased break-induced loss of heterozygosity","synonyms":[{"name":"decreased break-induced loss of heterozygosity during mitotic cell cycle","type":"related"},{"name":"decreased break-induced loss of heterozygosity during vegetative growth","type":"exact"},{"name":"reduced break-induced loss of heterozygosity","type":"exact"}],"termid":"FYPO:0005451"}


id: GO:0106265
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 H+ + hexanoyl-CoA + 3 malonyl-CoA = 2,4,6-trihydroxyphenylhexan-1-one + 3 CO2 + 4 CoA.","definition_xrefs":["PMID:9446571","RHEA:64352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"THPH synthase activity","synonyms":[{"name":"polyketide syntase","type":"broad"}],"termid":"GO:0106265"}


id: PBO:0070990
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 14","termid":"PBO:0070990"}


id: PBO:0059814
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 40","termid":"PBO:0059814"}


id: MONDO:1011955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylosis deformans, non-human animal","secondary_identifiers":["OMIA:001132"],"termid":"MONDO:1011955","xrefs":{"Monarch":{"xref_id":"1011955"}}}


id: GO:1905751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endosome to plasma membrane protein transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22869721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"is_a","term_name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"},{"relation_name":"is_a","term_name":"positive regulation of endocytic recycling","termid":"GO:2001137"},{"relation_name":"positively_regulates","term_name":"endosome to plasma membrane protein transport","termid":"GO:0099638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endosome to plasma membrane protein transport","synonyms":[{"name":"activation of endosome to plasma membrane protein transport","type":"narrow"},{"name":"up regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"up-regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"upregulation of endosome to plasma membrane protein transport","type":"exact"}],"termid":"GO:1905751"}


id: PBO:0056120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 7","termid":"PBO:0056120"}


id: GO:0051835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of synaptic structural plasticity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of synapse structural plasticity","termid":"GO:0051823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synapse structural plasticity","synonyms":[{"name":"activation of synapse structural plasticity","type":"narrow"},{"name":"stimulation of synapse structural plasticity","type":"narrow"},{"name":"up regulation of synapse structural plasticity","type":"exact"},{"name":"up-regulation of synapse structural plasticity","type":"exact"},{"name":"upregulation of synapse structural plasticity","type":"exact"}],"termid":"GO:0051835"}


id: PBO:0055873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 3","termid":"PBO:0055873"}


id: GO:1990001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the activation of an inactive cysteine-type endopeptidase involved in an apoptotic process.","definition_xrefs":["PMID:11943137","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibition of cysteine-type endopeptidase activity involved in apoptotic process (obsolete GO:1990001)","termid":"GO:1990001"}


id: SO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5' most region of a precursor transcript that is clipped off during processing.","direct_ancestors":[{"relation_name":"is_a","term_name":"clip","termid":"SO:0000303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_clip","synonyms":[{"name":"5' clip","type":"related"},{"name":"five prime clip","type":"exact"}],"termid":"SO:0000555"}


id: MONDO:0002686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mast-cell sarcoma (obsolete MONDO:0002686)","termid":"MONDO:0002686","xrefs":{"Monarch":{"xref_id":"0002686"}}}


id: PBO:0003487
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.13.11.-","termid":"PBO:0003487"}


id: GO:0019445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-tyrosine into other compounds, including fumarate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fumarate metabolic process","termid":"GO:0006106"},{"relation_name":"is_a","term_name":"L-tyrosine catabolic process","termid":"GO:0006572"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-tyrosine catabolic process to fumarate","secondary_identifiers":["MetaCyc:TYRFUMCAT-PWY"],"synonyms":[{"name":"tyrosine breakdown to fumarate","type":"exact"},{"name":"tyrosine degradation to fumarate","type":"exact"}],"termid":"GO:0019445"}


id: PR:Q9Y7U1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfk1 gene.","definition_xrefs":["UniProtKB:Q9Y7U1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sfk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.01","synonyms":[{"name":"Spom972h-sfk1","type":"exact"}],"termid":"PR:Q9Y7U1"}


id: MONDO:0014822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"15q14 microdeletion syndrome is a recently described syndrome characterized by developmental delay, short stature and facial dysmorphism.","definition_xrefs":["Orphanet:261190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15q14 microdeletion syndrome","secondary_identifiers":["SCTID:719575008","MEDGEN:930899","OMIM:616898","UMLS:C4305230","GARD:17242"],"synonyms":[{"name":"Del(15)(q14)","type":"exact"},{"name":"chromosome 15q14 deletion syndrome","type":"related"},{"name":"monosomy 15q14","type":"exact"}],"termid":"MONDO:0014822","xrefs":{"Monarch":{"xref_id":"0014822"}}}


id: MONDO:1011038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any oculocutaneous albinism that occurs in western gorillas due to a mutation in the SLC45A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, SLC45A2-related, western gorilla","secondary_identifiers":["OMIA:001821-9593"],"synonyms":[{"name":"coat color albinism, oculocutaneous type IV, western gorilla","type":"related"}],"termid":"MONDO:1011038","xrefs":{"Monarch":{"xref_id":"1011038"}}}


id: PBO:0064549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 11, pseudogene","termid":"PBO:0064549"}


id: PR:Q1MTQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- brl1 gene.","definition_xrefs":["UniProtKB:Q1MTQ0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase brl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.15","synonyms":[{"name":"BRE1-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RING finger protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-brl1","type":"exact"}],"termid":"PR:Q1MTQ0"}


id: MONDO:0015331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation syndrome with skin/mucosae involvement (obsolete MONDO:0015331)","secondary_identifiers":["Orphanet:139027"],"termid":"MONDO:0015331","xrefs":{"Monarch":{"xref_id":"0015331"}}}


id: PBO:0031429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glycerol_dehydrogenase_activity","termid":"PBO:0031429"}


id: PBO:0070705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 10","termid":"PBO:0070705"}


id: GO:0016144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside metabolic process","termid":"GO:0016143"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-glycoside biosynthetic process","synonyms":[{"name":"S-glycoside anabolism","type":"exact"},{"name":"S-glycoside biosynthesis","type":"exact"},{"name":"S-glycoside formation","type":"exact"},{"name":"S-glycoside synthesis","type":"exact"},{"name":"thioglycoside biosynthesis","type":"exact"},{"name":"thioglycoside biosynthetic process","type":"exact"}],"termid":"GO:0016144"}


id: PBO:0066494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 5","termid":"PBO:0066494"}


id: GO:0070851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth factor receptor.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"growth factor receptor binding","termid":"GO:0070851"}


id: PBO:0003657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK family kinase","termid":"PBO:0003657"}


id: GO:0017013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a flavin group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein flavinylation","synonyms":[{"name":"protein amino acid flavinylation","type":"exact"}],"termid":"GO:0017013"}


id: MONDO:0012071
data:
  {"annotated_genes":["SJAG_01957"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87435],"is_not":false,"summary":null,"term":"MONDO:0012071"}]},"cv_name":"mondo","definition":"Any congenital generalized lipodystrophy in which the cause of the disease is a mutation in the AGPAT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"},{"relation_name":"is_a","term_name":"Berardinelli-Seip congenital lipodystrophy","termid":"MONDO:0018883"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"congenital generalized lipodystrophy type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:318592","OMIM:608594","GARD:84","UMLS:C1720862","DOID:0111135"],"synonyms":[{"name":"AGPAT2 congenital generalised lipodystrophy (disease)","type":"exact"},{"name":"AGPAT2 congenital generalized lipodystrophy (disease)","type":"exact"},{"name":"AGPAT2-related Brunzell syndrome","type":"related"},{"name":"BSCL1","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy type 1","type":"related"},{"name":"Berardinelli-Seip congenital lipodystrophy, type 1","type":"exact"},{"name":"Brunzell syndrome AGPAT2-related","type":"exact"},{"name":"Brunzell syndrome, AGPAT2-related","type":"related"},{"name":"CGL1","type":"exact"},{"name":"congenital generalised lipodystrophy (disease) caused by mutation in AGPAT2","type":"exact"},{"name":"congenital generalized lipodystrophy (disease) caused by mutation in AGPAT2","type":"exact"},{"name":"congenital generalized lipodystrophy type 1","type":"exact"},{"name":"lipodystrophy, Berardinelli-Seip congenital, type 1","type":"related"},{"name":"lipodystrophy, congenital generalized, type 1","type":"related"}],"termid":"MONDO:0012071","terms_by_termid":{"MONDO:0012071":null},"xrefs":{"Monarch":{"xref_id":"0012071"}}}


id: GO:2001139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"regulation of phospholipid transport","termid":"GO:2001138"},{"relation_name":"negatively_regulates","term_name":"phospholipid transport","termid":"GO:0015914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of phospholipid transport","termid":"GO:2001139"}


id: GO:0019837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete herbicide susceptibility/resistance (obsolete GO:0019837)","synonyms":[{"name":"herbicide susceptibility/resistance","type":"exact"}],"termid":"GO:0019837"}


id: GO:0080012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trihydroxyferuloyl spermidine + S-adenosyl-L-methionine = dihydroxyferuloyl-sinapoyl spermidine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:18557837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"trihydroxyferuloyl spermidine O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11263"],"synonyms":[{"name":"N1,N5,N10-tris-(5-hydroxyferuloyl)spermidine O-methyltransferase activity","type":"exact"}],"termid":"GO:0080012"}


id: PBO:0090585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNAHis guanylyltransferase Thg1","termid":"PBO:0090585"}


id: MONDO:0010234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete body length, mouse, human homolog (obsolete MONDO:0010234)","synonyms":[{"name":"body length, mouse, HUMAN homolog","type":"related"}],"termid":"MONDO:0010234","xrefs":{"Monarch":{"xref_id":"0010234"}}}


id: MONDO:0003800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant hemangiopericytoma characterized by the presence of necrotic changes and in some cases high mitotic activity.","definition_xrefs":["NCIT:C9425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma, malignant","termid":"MONDO:0009330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conventional malignant hemangiopericytoma","secondary_identifiers":["DOID:6197","MEDGEN:232395","UMLS:C1333158"],"synonyms":[{"name":"conventional malignant hemangiopericytoma","type":"exact"}],"termid":"MONDO:0003800","xrefs":{"Monarch":{"xref_id":"0003800"}}}


id: FYPO:0002004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable microtubules of one or more types.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"microtubules absent from cell","synonyms":[{"name":"absent microtubules","type":"exact"},{"name":"microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"microtubules absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002004"}


id: MONDO:0002232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the nasal cavity.","direct_ancestors":[{"relation_name":"is_a","term_name":"nasal disorder","termid":"MONDO:0002436"},{"relation_name":"is_a","term_name":"upper respiratory tract disorder","termid":"MONDO:0004867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal cavity disorder","secondary_identifiers":["NCIT:C27102","SCTID:232340005","UMLS:C0339820","DOID:2163","MEDGEN:137929"],"synonyms":[{"name":"disease of nasal cavity","type":"exact"},{"name":"disease or disorder of nasal cavity","type":"exact"},{"name":"disorder of nasal cavity","type":"exact"},{"name":"nasal cavity disease","type":"exact"},{"name":"nasal cavity disease or disorder","type":"exact"},{"name":"nasal cavity disorder","type":"exact"}],"termid":"MONDO:0002232","xrefs":{"Monarch":{"xref_id":"0002232"}}}


id: MONDO:0017197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopathia striata-pigmentary dermopathy-white forelock syndrome is characterized by the association of osteopathia striata (longitudinal striations through most of the long bones) with a macular, hyperpigmented dermopathy and a white forelock.","definition_xrefs":["Orphanet:2779"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"osteopathia striata-pigmentary dermopathy-white forelock syndrome","secondary_identifiers":["MESH:C536054","GARD:5562","UMLS:C2931096","MEDGEN:419711"],"synonyms":[{"name":"Whyte Murphy syndrome","type":"related"},{"name":"Whyte-Murphy syndrome","type":"exact"},{"name":"osteopathia striata associated with familial dermopathy and white forelock","type":"related"},{"name":"osteopathia striata with pigmentary dermopathy including white forelock","type":"related"}],"termid":"MONDO:0017197","xrefs":{"Monarch":{"xref_id":"0017197"}}}


id: PBO:0031806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_at_mitotic_metaphase/anaphase_transition","termid":"PBO:0031806"}


id: PBO:0092012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine (ucu), mitochondrial","termid":"PBO:0092012"}


id: PBO:0075660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPTBN1 antisense RNA 1","termid":"PBO:0075660"}


id: PBO:0030502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_checkpoint","termid":"PBO:0030502"}


id: GO:0097304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways by which signal peptide cleavage leads to formation of a water-soluble protein-lipid complex.","definition_xrefs":["GOC:pde","UniPathway:UPA00665","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein biosynthetic process via signal peptide cleavage (obsolete GO:0097304)","synonyms":[{"name":"lipoprotein biosynthesis (signal peptide cleavage)","type":"exact"}],"termid":"GO:0097304"}


id: PR:O94295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pus2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.11","synonyms":[{"name":"Spom972h-pus2","type":"exact"},{"name":"tRNA pseudouridylate synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-uridine isomerase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94295"}


id: PBO:0004400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dbf4(Dfp1)-dependent protein kinase Hsk1","termid":"PBO:0004400"}


id: PBO:0048896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 17, pseudogene","termid":"PBO:0048896"}


id: PBO:0042742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPP pseudogene 1","termid":"PBO:0042742"}


id: PBO:0083534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF TSR2/YLR435W","termid":"PBO:0083534"}


id: PR:O94556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle protein 23 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00543","PANTHER:PTHR12558:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.14","secondary_identifiers":["UniProtKB:O94556"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDC23","type":"exact"},{"name":"cell untimely torn protein 23 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94556"}


id: MONDO:0005565
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant neoplasm composed of undifferentiated cells.","definition_xrefs":["NCIT:C8997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"blastoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0936282","DOID:0070003","DOID:4766","MEDGEN:181704","EFO:0005785","ICDO:8981/3"],"synonyms":[{"name":"blastoma","type":"exact"},{"name":"embryoma","type":"exact"}],"termid":"MONDO:0005565","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0005565"}}}


id: GO:0150078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuroinflammatory response.","definition_xrefs":["GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"is_a","term_name":"regulation of neuroinflammatory response","termid":"GO:0150077"},{"relation_name":"positively_regulates","term_name":"neuroinflammatory response","termid":"GO:0150076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuroinflammatory response","termid":"GO:0150078"}


id: PBO:0090141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit, ribosomal protein L7-like Rpl701","termid":"PBO:0090141"}


id: GO:0006495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete terminal O-glycosylation (obsolete GO:0006495)","synonyms":[{"name":"terminal O-glycosylation","type":"exact"}],"termid":"GO:0006495"}


id: MONDO:0008000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 1","secondary_identifiers":["MEDGEN:854348","SCTID:37796009","OMIM:157300","ICD9:346.80","UMLS:C3887485","ICD9:346.90"],"synonyms":[{"name":"Mgau","type":"related"},{"name":"Mgr1","type":"related"},{"name":"migraine","type":"related"},{"name":"migraine with or without aura, susceptibility to, 1","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 1","type":"exact"},{"name":"migraine without aura, susceptibility to","type":"exact"},{"name":"migraine, resistance to","type":"exact"},{"name":"migraine, susceptibility to","type":"exact"}],"termid":"MONDO:0008000","xrefs":{"Monarch":{"xref_id":"0008000"}}}


id: GO:0034006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = amorpha-4,11-diene + diphosphate.","definition_xrefs":["EC:4.2.3.24","RHEA:18325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"amorpha-4,11-diene synthase activity","secondary_identifiers":["MetaCyc:RXN-8046","KEGG_REACTION:R07630"],"synonyms":[{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase (amorpha-4,11-diene-forming) activity","type":"related"},{"name":"amorphadiene synthase activity","type":"related"}],"termid":"GO:0034006"}


id: PBO:0084647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule polymerase of the XMAP215/Dis1 family; required for elongation of mitotic spindle during anaphase, as well as for spindle orientation and metaphase chromosome alignment; stabilizes or destabilizes kinetochore-microtubule attachment depending on kinetochore tension; interacts with spindle pole body component Spc72p; metazoan ch-TOG/XMAP215 family member","termid":"PBO:0084647"}


id: GO:1900604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tensidol A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"tensidol A metabolic process","termid":"GO:1900603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"tensidol A catabolic process","synonyms":[{"name":"tensidol A breakdown","type":"exact"},{"name":"tensidol A catabolism","type":"exact"},{"name":"tensidol A degradation","type":"exact"}],"termid":"GO:1900604"}


id: PBO:0038323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malacards_displayed_disease_name","termid":"PBO:0038323"}


id: PBO:0004538
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Phx1","termid":"PBO:0004538"}


id: GO:0160065
data:
  {"annotated_genes":["SJAG_04943","SJAG_01188"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94702,117474],"is_not":false,"summary":null,"term":"GO:0160065"}]},"cv_name":"cellular_component","definition":"A protein complex associated with the mitotic spindle pole body during interphase and mitosis and comprises of the proteins of the septation initiation signaling network (SIN) of fission yeast or mitotic exit network (MEN) of budding yeast, organized by two scaffold/adaptor proteins.","definition_xrefs":["PMID:22525225","PMID:21131906","PMID:22684255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer plaque of mitotic spindle pole body","termid":"GO:0061499"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01188":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SIN/MEN signaling complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Hippo signaling complex","type":"narrow"},{"name":"MEN signaling complex","type":"narrow"},{"name":"SIN signaling complex","type":"narrow"},{"name":"SIN/MEN signalling complex","type":"exact"}],"termid":"GO:0160065","terms_by_termid":{"GO:0160065":null}}


id: PBO:0081509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 415 pseudogene 1","termid":"PBO:0081509"}


id: MOD:00725
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group linked through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"complex glycosylation","termid":"MOD:00725"}


id: PBO:0061499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropilin 1","termid":"PBO:0061499"}


id: PBO:0076248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUV39H2 divergent transcript","termid":"PBO:0076248"}


id: PBO:0041857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 4","termid":"PBO:0041857"}


id: GO:0071211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the vacuole using signals contained within the protein, occurring as part of autophagy, the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"part_of","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006605","GO:0006914","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein targeting to vacuole involved in autophagy","synonyms":[{"name":"protein targeting to autophagosome","type":"related"}],"termid":"GO:0071211"}


id: PBO:0055807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 2b, pseudogene","termid":"PBO:0055807"}


id: PBO:0116627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 4","termid":"PBO:0116627"}


id: GO:1901309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of sterol regulatory element binding protein cleavage.","definition_xrefs":["PMID:15899885","PMID:16525117","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sterol regulatory element binding protein cleavage (obsolete GO:1901309)","synonyms":[{"name":"down regulation of SREBP cleavage","type":"exact"},{"name":"down regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"down-regulation of SREBP cleavage","type":"exact"},{"name":"down-regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"downregulation of SREBP cleavage","type":"exact"},{"name":"downregulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"inhibition of SREBP cleavage","type":"exact"},{"name":"inhibition of SREBP processing","type":"exact"},{"name":"inhibition of sterol regulatory element binding protein cleavage","type":"narrow"},{"name":"negative regulation of SREBP cleavage","type":"exact"}],"termid":"GO:1901309"}


id: PATO:0000741
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000741 high enzyme function value (obsolete PATO:0000741)","termid":"PATO:0000741"}


id: MOD:00912
data:
  {"annotated_genes":["SJAG_01766","SJAG_04149","SJAG_03641","SJAG_03671","SJAG_03914","SJAG_00432","SJAG_03861","SJAG_02972","SJAG_05230","SJAG_00937","SJAG_02450","SJAG_00464","SJAG_02205","SJAG_02766","SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00126"},{"annotations":[82286,82467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00123"},{"annotations":[82301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00127"},{"annotations":[82534,82413,82383,82282,82375,82424,82331,82339,82530,82429,82404,82459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00128"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-lysine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00432":null,"SJAG_00464":null,"SJAG_00937":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02450":null,"SJAG_02766":null,"SJAG_02972":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_04149":null,"SJAG_05230":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-lysine residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"ModLys","type":"exact"}],"termid":"MOD:00912","terms_by_termid":{"MOD:00123":null,"MOD:00126":null,"MOD:00127":null,"MOD:00128":null}}


id: PBO:0084100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanosine diphosphatase located in the Golgi; involved in the transport of GDP-mannose into the Golgi lumen, converting GDP to GMP after mannose is transferred to substrates; null mutants are defective in sporulation and pre-meiotic S phase entry; orthologous to human ENTPD6, a meiosis-associated non-obstructive azoospermia (NOA) related gene identified in GWAS studies","termid":"PBO:0084100"}


id: PBO:0067558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 711, pseudogene","termid":"PBO:0067558"}


id: MONDO:0007716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-thalassemia-intellectual deficit syndrome linked to chromosome 16 (ATR-16), a contiguous gene deletion syndrome, is a form of alpha-thalassemia characterized by microcytosis, hypochromia, normal hemoglobin (Hb) level or mild anemia, associated with developmental abnormalities.","definition_xrefs":["Orphanet:98791"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"alpha thalassemia-intellectual disability syndrome type 1","secondary_identifiers":["ICD10CM:D56.0","MESH:C563050","OMIM:141750","SCTID:277918006","DOID:0110029","GARD:16862","UMLS:C0795917","DECIPHER:65","MEDGEN:162892","NORD:1879","ICD9:282.49"],"synonyms":[{"name":"ALPHA-thalassemia/intellectual disability syndrome, chromosome 16-related","type":"related"},{"name":"ALPHA-thalassemia/mental retardation syndrome, chromosome 16-related","type":"related"},{"name":"ATR syndrome linked to chromosome 16","type":"exact"},{"name":"ATR syndrome, deletion type","type":"exact"},{"name":"ATR, deletion-type","type":"related"},{"name":"ATR-16 Syndrome","type":"exact"},{"name":"ATR-16 syndrome","type":"exact"},{"name":"Alpha thalassemia-intellectual disability syndrome","type":"exact"},{"name":"Alpha thalassemia-intellectual disability syndrome, deletion type","type":"exact"},{"name":"Alpha thalassemia-mental retardation syndrome","type":"exact"},{"name":"Alpha-thalassemia-intellectual disability syndrome linked to chromosome type 16","type":"exact"},{"name":"Alpha-thalassemia/intellectual disability syndrome, deletion-type","type":"related"},{"name":"Alpha-thalassemia/mental retardation syndrome, deletion-type","type":"related"},{"name":"Haemoglobin H-related intellectual disability","type":"related"},{"name":"Haemoglobin H-related mental retardation","type":"related"},{"name":"Hemoglobin H-related intellectual disability","type":"related"},{"name":"Hemoglobin H-related mental retardation","type":"related"},{"name":"alpha thalassemia-intellectual disability syndrome, deletion type","type":"exact"},{"name":"alpha thalassemia-retardation syndrome","type":"exact"},{"name":"alpha-thalassemia-intellectual disability syndrome linked to chromosome 16","type":"exact"},{"name":"alpha-thalassemia/intellectual disability syndrome, deletion-type","type":"exact"},{"name":"alpha-thalassemia/intellectual disability syndrome, type 1","type":"exact"},{"name":"alpha-thalassemia/mental retardation syndrome, deletion-type","type":"exact"},{"name":"alpha-thalassemia/mental retardation syndrome, type 1","type":"exact"},{"name":"chromosome 16P deletion syndrome","type":"related"},{"name":"intellectual disability with Haemoglobin H","type":"related"},{"name":"intellectual disability with Hemoglobin H","type":"related"},{"name":"mental retardation with Haemoglobin H","type":"related"},{"name":"mental retardation with Hemoglobin H","type":"related"}],"termid":"MONDO:0007716","xrefs":{"Monarch":{"xref_id":"0007716"}}}


id: SO:0002361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for cytosolic LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_rRNA_gene","termid":"SO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_LSU_rRNA_gene","synonyms":[{"name":"cytosolic large subunit rRNA gene","type":"exact"}],"termid":"SO:0002361"}


id: PBO:0049465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin C (Gerbich blood group)","termid":"PBO:0049465"}


id: MONDO:0970950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Rothmund-Thomson syndrome","termid":"MONDO:0010002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Rothmund-Thomson syndrome, type 4","secondary_identifiers":["MEDGEN:1854023","UMLS:C5935619","OMIM:620819"],"termid":"MONDO:0970950","xrefs":{"Monarch":{"xref_id":"0970950"}}}


id: GO:0061956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infiltration by sperm of the cumulus oophorus to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.","definition_xrefs":["PMID:21380641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration of cumulus oophorus","synonyms":[{"name":"penetration of cumulus cells layer","type":"exact"},{"name":"penetration of cumulus mass","type":"exact"}],"termid":"GO:0061956"}


id: PBO:0039950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARIH2 opposite strand lncRNA","termid":"PBO:0039950"}


id: PBO:0030131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_iron_level","termid":"PBO:0030131"}


id: GO:0010520
data:
  {"annotated_genes":["SJAG_04205","SJAG_00266","SJAG_02592","SJAG_03438","SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91011,96244,118288],"is_not":false,"summary":null,"term":"GO:0010520"},{"annotations":[109925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[109928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[90903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01677":null,"SJAG_02592":null,"SJAG_03438":null,"SJAG_04205":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010520","terms_by_termid":{"GO:0010520":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null}}


id: PBO:0091474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase, implicated in vitamin metabolism, or cellular detoxification","termid":"PBO:0091474"}


id: PBO:0088401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus2","termid":"PBO:0088401"}


id: GO:0019132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of peptides after specific recognition of a C-terminal tripeptide, Xaa-Yaa-Zaa, in which Xaa is preferably Ala or Leu, Yaa is preferably Ala or Tyr, and Zaa is preferably Ala. Cleavage is at a variable distance from the C-terminus; a typical cleavage is -Ala-Ala-Arg-Ala-Ala-Lys-Glu-Asn-Tyr-Ala-Leu-Ala-Ala.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal processing peptidase activity (obsolete GO:0019132)","synonyms":[{"name":"C-terminal processing peptidase activity","type":"exact"},{"name":"CtpA gene product (Synechocystis sp.)","type":"related"},{"name":"Tsp protease","type":"narrow"},{"name":"photosystem II D1 protein processing peptidase","type":"narrow"},{"name":"protease Re","type":"related"},{"name":"tail-specific protease activity","type":"related"}],"termid":"GO:0019132"}


id: PBO:0071902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 40","termid":"PBO:0071902"}


id: GO:2001147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to camalexin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"camalexin binding","synonyms":[{"name":"3-(1,3-thiazol-2-yl)-1H-indole binding","type":"exact"}],"termid":"GO:2001147"}


id: PBO:0057716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-2","termid":"PBO:0057716"}


id: PBO:0047938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(13)(q21)","termid":"PBO:0047938"}


id: MONDO:0012046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital corneal opacities, cornea guttata, and corectopia","secondary_identifiers":["UMLS:C1837970","OMIM:608484","MEDGEN:324911","MESH:C563921"],"synonyms":[{"name":"congenital corneal opacities, cornea guttata, and corectopia","type":"exact"},{"name":"corneal opacities, congenital, with cornea guttata and corectopia","type":"related"}],"termid":"MONDO:0012046","xrefs":{"Monarch":{"xref_id":"0012046"}}}


id: PBO:0065033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin regulatory element binding","termid":"PBO:0065033"}


id: GO:0072362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glycolysis by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glycolytic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0072362)","synonyms":[{"name":"regulation of glycolysis by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072362"}


id: PBO:0113418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein that associates with polysomes; may be involved in regulating mRNA translation; involved in the copper-dependent mineralization of copper sulfide complexes on cell surface in cells cultured in copper salts; role in preventing L-A mycovirus pathogenesis; SLF1 has a paralog, SRO9, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0113418"}


id: GO:2000448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage migration inhibitory factor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of macrophage migration inhibitory factor signaling pathway","termid":"GO:2000446"},{"relation_name":"positively_regulates","term_name":"macrophage migration inhibitory factor signaling pathway","termid":"GO:0035691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"positive regulation of MIF signaling pathway","type":"exact"},{"name":"positive regulation of macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:2000448"}


id: MONDO:1012076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facial digital syndrome, non-human animal","termid":"MONDO:1011654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial digital syndrome, cattle","secondary_identifiers":["OMIA:000360-9913"],"termid":"MONDO:1012076","xrefs":{"Monarch":{"xref_id":"1012076"}}}


id: PBO:0053754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 994","termid":"PBO:0053754"}


id: GO:1901044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein polyubiquitination that is involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:21324894","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete protein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process (obsolete GO:1901044)","termid":"GO:1901044"}


id: PBO:0073334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 10","termid":"PBO:0073334"}


id: GO:0008347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a glial cell, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration","secondary_identifiers":["GO:0043359"],"synonyms":[{"name":"glia cell migration","type":"exact"}],"termid":"GO:0008347"}


id: MONDO:1012088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alpha fucosidosis, non-human animal","termid":"MONDO:1011783"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha fucosidosis, domestic cat","secondary_identifiers":["OMIA:000396-9685"],"termid":"MONDO:1012088","xrefs":{"Monarch":{"xref_id":"1012088"}}}


id: PBO:0017495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyketide cyclase SnoaL-like domain protein","termid":"PBO:0017495"}


id: PR:O60100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An importin-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10527:SF6","OMA:SCHPO04012","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit beta-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.03c","secondary_identifiers":["UniProtKB:O60100"],"synonyms":[{"name":"Spom972h-IPO4","type":"exact"},{"name":"importin-123 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit beta-4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin-123 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60100"}


id: PBO:0038410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-characteristic_of_part_of","termid":"PBO:0038410"}


id: FYPO:0003053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is increased (i.e. occurs to a greater extent) at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PMID:22582262","PMID:24173580","PMID:23117617","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"increased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"increased homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"increased synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003053"}


id: MONDO:0019538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that is caused by stress.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired secondary polycythemia","termid":"MONDO:0016541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Gaisbock syndrome","secondary_identifiers":["MedDRA:10053885","icd11.foundation:533704171","MEDGEN:745735","MedDRA:10042217","SCTID:36874002","GARD:19104","Orphanet:90041","DOID:2838","NCIT:C27174","UMLS:C2242785"],"synonyms":[{"name":"Gaisbock's syndrome","type":"exact"},{"name":"Gaisboeck's syndrome","type":"related"},{"name":"GaisböCK syndrome","type":"related"},{"name":"Pseudopolycythaemia","type":"related"},{"name":"Pseudopolycythemia","type":"related"},{"name":"polycythemia, emotional","type":"exact"},{"name":"stress erythrocytosis","type":"exact"},{"name":"stress polycythemia","type":"exact"}],"termid":"MONDO:0019538","xrefs":{"Monarch":{"xref_id":"0019538"}}}


id: GO:0031028
data:
  {"annotated_genes":["SJAG_02232","SJAG_01464","SJAG_01805","SJAG_03631","SJAG_04468","SJAG_02514","SJAG_02169","SJAG_06270","SJAG_03376","SJAG_04943","SJAG_04597","SJAG_03342","SJAG_00526","SJAG_03353","SJAG_03508","SJAG_03681","SJAG_04776","SJAG_01188","SJAG_04455","SJAG_03048","SJAG_00082","SJAG_03592","SJAG_00600","SJAG_00883","SJAG_01386","SJAG_00229","SJAG_03936","SJAG_01790","SJAG_00078"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76070,91085,96285,102855,108335,109093],"is_not":false,"summary":null,"term":"GO:0031028"},{"annotations":[112141,74682,95319,109493,103186,94790,97519,106980,94705,109182,92573,101490,93591,117906,109048],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[104303,91846,95672,89359,112500],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[91807,115357,106432],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031029"}]},"cv_name":"biological_process","definition":"The series of molecular signals, mediated by the small GTPase Ras, that results in the initiation of contraction of the contractile ring, at the beginning of cytokinesis and cell division by septum formation. The pathway coordinates chromosome segregation with mitotic exit and cytokinesis.","definition_xrefs":["GOC:mah","PMID:16775007","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00883":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02232":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03376":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"septation initiation signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SIN","type":"exact"},{"name":"septation initiation network","type":"exact"},{"name":"septation initiation signaling cascade","type":"related"},{"name":"septation initiation signalling","type":"exact"}],"termid":"GO:0031028","terms_by_termid":{"GO:0031028":null,"GO:0031029":null,"GO:0031030":null,"GO:0031031":null}}


id: GO:0004436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol = D-myo-inositol 1,2-cyclic phosphate + diacylglycerol.","definition_xrefs":["EC:4.6.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol diacylglycerol-lyase activity","secondary_identifiers":["RHEA:17093","MetaCyc:3.1.4.10-RXN"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol diacyl-sn-glycerol-lyase (1D-myo-inositol-1,2-cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidyl-1D-myo-inositol diacylglycerol-lyase (1,2-cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidyl-D-myo-inositol inositolphosphohydrolase (cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidylinositol phosphodiesterase activity","type":"exact"},{"name":"monophosphatidylinositol phosphodiesterase activity","type":"broad"}],"termid":"GO:0004436"}


id: PATO:0000923
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000923 relative width (obsolete PATO:0000923)","termid":"PATO:0000923"}


id: PBO:0043771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX20","termid":"PBO:0043771"}


id: MONDO:0034024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare systemic disease for which two subtypes exist, either related to the gene PLOD1 or FKBP14 (formerly FKBP22), and for which the clinically overlapping characteristics include congenital muscle hypotonia, congenital or early-onset kyphoscoliosis (progressive or non-progressive), and generalized joint hypermobility with dislocations/subluxations (in particular of the shoulders, hips, and knees). Additional features which may occur in both subtypes are skin hyperextensibility, easy bruising of the skin, rupture/aneurysm of a medium-sized artery, osteopenia/osteoporosis, blue sclerae, umbilical or inguinal hernia, chest deformity, marfanoid habitus, talipes equinovarus, and refractive errors. Gene-specific features, with variable presentation, are additionally observed in each subtype.","definition_xrefs":["Orphanet:536545"],"gene_count":0,"genotype_count":0,"name":"obsolete kyphoscoliotic Ehlers-Danlos syndrome (obsolete MONDO:0034024)","secondary_identifiers":["NANDO:2201259","NANDO:1200649"],"synonyms":[{"name":"EDS VI","type":"exact"},{"name":"kyphoscoliotic EDS","type":"exact"}],"termid":"MONDO:0034024","xrefs":{"Monarch":{"xref_id":"0034024"}}}


id: MONDO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant ovarian germ cell neoplasm (obsolete MONDO:0002231)","termid":"MONDO:0002231","xrefs":{"Monarch":{"xref_id":"0002231"}}}


id: GO:0033620
data:
  {"annotated_genes":["SJAG_03939","SJAG_01412","SJAG_00145","SJAG_04768","SJAG_02622","SJAG_04942","SJAG_04601","SJAG_02720","SJAG_02037","SJAG_00285","SJAG_00448","SJAG_03747","SJAG_04022"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89310,94683,97035,97387,99440,100028,100984,106220,111185,111786,113276,114741,120127],"is_not":false,"summary":null,"term":"GO:0033620"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that forms during meiotic prophase in a fixed position in the horsetail nucleus; contains Mei2 and meiRNA. May play a role in the progression of meiosis I.","definition_xrefs":["PMID:12808043","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00285":null,"SJAG_00448":null,"SJAG_01412":null,"SJAG_02037":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_03747":null,"SJAG_03939":null,"SJAG_04022":null,"SJAG_04601":null,"SJAG_04768":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Mei2 nuclear dot complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mei2 dot","type":"exact"},{"name":"Mei2 nuclear dot","type":"broad"},{"name":"nuclear body","type":"related"}],"termid":"GO:0033620","terms_by_termid":{"GO:0033620":null}}


id: PBO:0077864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 5","termid":"PBO:0077864"}


id: GO:0031771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 orexin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orexin receptor binding","termid":"GO:0042324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 1 orexin receptor binding","synonyms":[{"name":"OX1 orexin receptor binding","type":"exact"},{"name":"type 1 hypocretin receptor binding","type":"exact"},{"name":"type 1 hypocretin receptor ligand","type":"narrow"}],"termid":"GO:0031771"}


id: PR:Q9UT23
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fml1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase fml1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.05","synonyms":[{"name":"FANCM-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fml1","type":"exact"}],"termid":"PR:Q9UT23"}


id: MONDO:0008508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"symphalangism","termid":"MONDO:0000151"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symphalangism, C. S. Lewis type","secondary_identifiers":["OMIM:185650","UMLS:C1861404","MESH:C566100","MEDGEN:396126"],"synonyms":[{"name":"symphalangism, C. S. Lewis type","type":"exact"},{"name":"thumbs, stiff","type":"related"}],"termid":"MONDO:0008508","xrefs":{"Monarch":{"xref_id":"0008508"}}}


id: MONDO:0044632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carotid artery disorder","termid":"MONDO:0005269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracranial carotid artery aneurysm","secondary_identifiers":["Orphanet:494424","UMLS:C4476554","GARD:22003","MEDGEN:1393749"],"synonyms":[{"name":"ECAA","type":"exact"},{"name":"ECCA","type":"exact"},{"name":"Ecca","type":"exact"}],"termid":"MONDO:0044632","xrefs":{"Monarch":{"xref_id":"0044632"}}}


id: PBO:0043076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 5 subunit","termid":"PBO:0043076"}


id: PBO:0084844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; has similarity to E. coli L7/L12 and human MRPL7 ribosomal proteins; associates with the mitochondrial nucleoid; required for normal respiratory growth","termid":"PBO:0084844"}


id: MONDO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm that arises from the vagina and is characterized by the presence of a fibrovascular stalk lined by normal squamous epithelium. There is no evidence of atypia or relation to human papillomavirus.","definition_xrefs":["NCIT:C6374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign vaginal neoplasm","termid":"MONDO:0000647"},{"relation_name":"is_a","term_name":"vaginal squamous tumor","termid":"MONDO:0001806"},{"relation_name":"is_a","term_name":"squamous papilloma","termid":"MONDO:0001825"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal squamous papilloma","secondary_identifiers":["UMLS:C1336943","DOID:137","MEDGEN:234983"],"synonyms":[{"name":"squamous papilloma of the vagina","type":"exact"},{"name":"squamous papilloma of vagina","type":"exact"},{"name":"vagina squamous papilloma","type":"exact"},{"name":"vaginal squamous papilloma","type":"exact"}],"termid":"MONDO:0001779","xrefs":{"Monarch":{"xref_id":"0001779"}}}


id: PBO:0090156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm3","termid":"PBO:0090156"}


id: PBO:0114489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase; required for signal transduction during entry into meiosis; promotes the formation of the Ime1p-Ume6p complex by phosphorylating Ime1p and Ume6p; shares similarity with mammalian glycogen synthase kinase 3-beta; protein abundance increases in response to DNA replication stress; RIM11 has a paralog, MRK1, that arose from the whole genome duplication","termid":"PBO:0114489"}


id: GO:0034408
data:
  {"annotated_genes":["SJAG_03587","SJAG_04771","SJAG_04666","SJAG_04483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[89341,94281],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan metabolic process","termid":"GO:0070879"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore wall biogenesis","termid":"GO:0070591"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0007049","GO:0030437","GO:0008150","GO:0071554","GO:0005975","GO:0044085"],"is_obsolete":false,"name":"ascospore wall beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall beta-glucan metabolism","type":"exact"}],"termid":"GO:0034408","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0140748":null}}


id: MONDO:0016986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital smooth muscle hamartoma (CSMH) is a rare cutaneous hamartomatous lesion most often located on the lumbosacral area or proximal limbs (but rarely on atypical areas such as scalp, eyelid or foot) and characterized by a disorganized proliferation of smooth muscle fibers of arrector pili presenting usually as a localized skin-colored or hyperpigmented plaque (up to 10 cm in diameter) with prominent vellus hairs (most common classic form) or less commonly by multiple skin-colored papules that can coalesce to form irregularly shaped plaques. With time, hyperpigmentation and vellus hairs usually diminish and neither malignant transformation nor associated systemic involvement has been reported.","definition_xrefs":["Orphanet:263435"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital smooth muscle hamartoma","secondary_identifiers":["SCTID:239144007","MEDGEN:590701","GARD:20902","UMLS:C0406819","ICD9:759.6"],"termid":"MONDO:0016986","xrefs":{"Monarch":{"xref_id":"0016986"}}}


id: GO:0009425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the three major substructures of the bacterial-type flagellum, the basal body is embedded in the cell envelope (the plasma membrane, peptidoglycan cell wall, and, if one is present, the outer membrane); it houses the secretion apparatus that exports the more distal components and the flagellar motor.","definition_xrefs":["PMID:10572114","PMID:12624192","PMID:24697492","GOC:mtg_sensu","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum","termid":"GO:0009288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body","synonyms":[{"name":"flagellar basal body","type":"broad"},{"name":"flagellin-based flagellum basal body","type":"exact"}],"termid":"GO:0009425"}


id: PBO:0048083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 4","termid":"PBO:0048083"}


id: MONDO:0008880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bowen syndrome of multiple malformations","secondary_identifiers":["MESH:C538164","Orphanet:1271","UMLS:C1859404","OMIM:211200","MEDGEN:349159"],"synonyms":[{"name":"Bowen syndrome","type":"exact"},{"name":"Bowen syndrome of multiple malformations","type":"exact"}],"termid":"MONDO:0008880","xrefs":{"Monarch":{"xref_id":"0008880"}}}


id: PBO:0086145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for normal mitochondrial morphology; has similarity to hemolysins","termid":"PBO:0086145"}


id: MONDO:0005457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute stress reaction (obsolete MONDO:0005457)","termid":"MONDO:0005457","xrefs":{"Monarch":{"xref_id":"0005457"}}}


id: PBO:0087194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rpd3L histone deacetylase complex subunit; key transcriptional regulator of early meiotic genes; involved in chromatin remodeling and transcriptional repression via DNA looping; binds URS1 upstream regulatory sequence, represses transcription by recruiting conserved histone deacetylase Rpd3p (through co-repressor Sin3p) and chromatin-remodeling factor Isw2p; couples metabolic responses to nutritional cues with initiation and progression of meiosis","termid":"PBO:0087194"}


id: PBO:0073949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 20 member 1 pseudogene 2","termid":"PBO:0073949"}


id: PBO:0110040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAA40 pseudogene 1","termid":"PBO:0110040"}


id: PBO:0050712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPB1 associated protein 1","termid":"PBO:0050712"}


id: PBO:0083536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YAP1802/YGR241C","termid":"PBO:0083536"}


id: PR:O74436
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle subunit SRP68 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04287","PANTHER:PTHR12860:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit srp68 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.05c","secondary_identifiers":["UniProtKB:O74436"],"synonyms":[{"name":"Spom972h-SRP68","type":"exact"},{"name":"signal recognition particle 68 kDa protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74436"}


id: PBO:0087683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the multiprotein cohesin complex; essential protein involved in chromosome segregation and in double-strand DNA break repair; SMC chromosomal ATPase family member, binds DNA with a preference for DNA with secondary structure","termid":"PBO:0087683"}


id: GO:0033535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ajugose, the hexasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"ajugose metabolic process","synonyms":[{"name":"ajugose metabolism","type":"exact"}],"termid":"GO:0033535"}


id: PBO:0017964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Mtd1 (predicted)","termid":"PBO:0017964"}


id: PBO:0036407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 2 Mtx2 (predicted)","termid":"PBO:0036407"}


id: PBO:0079678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3A","termid":"PBO:0079678"}


id: GO:0009330
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses DNA topoisomerase II (double strand cut, ATP-hydrolyzing) activity.","definition_xrefs":["WikiPedia:Type_II_topoisomerase","GOC:mah","GOC:krc","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex","termid":"GO:0009330"}


id: PBO:0086795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBL044W is not an essential protein","termid":"PBO:0086795"}


id: GO:1990239
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a steroid hormone.","definition_xrefs":["GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"steroid hormone binding","termid":"GO:1990239"}


id: MONDO:0043707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A non-neoplastic or neoplastic disorder that affects the structures of the mediastinum. Representative examples include mediastinitis, mediastinal lipoma, mediastinal schwannoma, thymoma, and mediastinal lymphoma.","definition_xrefs":["NCIT:C26826"],"gene_count":0,"genotype_count":0,"name":"obsolete mediastinal disorder (obsolete MONDO:0043707)","secondary_identifiers":["MESH:D008477","SCTID:49483002"],"synonyms":[{"name":"disease of mediastinum","type":"exact"},{"name":"disease or disorder of mediastinum","type":"exact"},{"name":"disease, mediastinal","type":"related"},{"name":"diseases, mediastinal","type":"related"},{"name":"disorder of mediastinum","type":"exact"},{"name":"mediastinal disease","type":"exact"},{"name":"mediastinal disorder","type":"exact"},{"name":"mediastinum disease","type":"exact"},{"name":"mediastinum disease or disorder","type":"exact"}],"termid":"MONDO:0043707","xrefs":{"Monarch":{"xref_id":"0043707"}}}


id: SO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small nuclear RNA molecule involved in pre-mRNA splicing and processing.","definition_xrefs":["WB:ems","PMID:11733745"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"snRNA_primary_transcript","termid":"SO:0000231"},{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/SnRNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:snRNA","type":"exact"},{"name":"small nuclear RNA","type":"exact"}],"termid":"SO:0000274"}


id: PBO:0054625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2030","termid":"PBO:0054625"}


id: GO:0033979
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving box H/ACA type small nucleolar RNA.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0008150","GO:0016074"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"box H/ACA sRNA metabolic process","type":"narrow"},{"name":"box H/ACA snoRNA metabolic process","type":"narrow"}],"termid":"GO:0033979","terms_by_termid":{"GO:0000495":null}}


id: FYECO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping starvation and timing","termid":"FYECO:0000239"}


id: GO:0097388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 19 (CCL19) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 19 production","synonyms":[{"name":"CCL19 production","type":"exact"},{"name":"EBI1 ligand chemokine production","type":"exact"},{"name":"ELC production","type":"exact"},{"name":"MIP-3-beta production","type":"exact"},{"name":"macrophage inflammatory protein-3-beta production","type":"exact"}],"termid":"GO:0097388"}


id: FYPO:0002838
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome","termid":"FYPO:0004996"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_01050"],"name":"abnormal protein localization to chromosome during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromosome during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002838","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: PBO:0085995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus","termid":"PBO:0085995"}


id: GO:1904459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of substance P secretion.","definition_xrefs":["GO_REF:0000058","PMID:11278900","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"is_a","term_name":"regulation of substance P secretion","termid":"GO:1904458"},{"relation_name":"negatively_regulates","term_name":"substance P secretion","termid":"GO:1990772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of substance P secretion","synonyms":[{"name":"down regulation of substance P secretion","type":"exact"},{"name":"down-regulation of substance P secretion","type":"exact"},{"name":"downregulation of substance P secretion","type":"exact"},{"name":"inhibition of substance P secretion","type":"narrow"}],"termid":"GO:1904459"}


id: PBO:0079843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-13 homolog B","termid":"PBO:0079843"}


id: GO:0039704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral translation initiation mechanism where ribosomes are loaded onto viral mRNA at the 5'-cap structure and start scanning for a short distance before by-passing the large internal leader region and initiating at a downstream start site.","definition_xrefs":["VZ:608","PMID:15827182","PMID:18195037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral translational shunt","synonyms":[{"name":"ribosomal shunt initiation pathway","type":"exact"}],"termid":"GO:0039704"}


id: PBO:0030708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_replication_origin_binding","termid":"PBO:0030708"}


id: GO:0031652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of heat generation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heat generation","termid":"GO:0031650"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heat generation","synonyms":[{"name":"activation of heat generation","type":"narrow"},{"name":"stimulation of heat generation","type":"narrow"},{"name":"up regulation of heat generation","type":"exact"},{"name":"up-regulation of heat generation","type":"exact"},{"name":"upregulation of heat generation","type":"exact"}],"termid":"GO:0031652"}


id: GO:0044510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of signal transduction in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete venom-mediated activation of signal transduction in another organism (obsolete GO:0044510)","synonyms":[{"name":"envenomation resulting in positive regulation of signal transduction in another organism","type":"exact"},{"name":"envenomation resulting in positive regulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044510"}


id: GO:0051444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ubiquitin transferase activity.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein ubiquitination","termid":"GO:0031397"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-protein transferase activity","termid":"GO:0051438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ubiquitin-protein transferase activity","synonyms":[{"name":"APC inhibition","type":"narrow"},{"name":"APC inhibitor","type":"narrow"},{"name":"SCF complex inhibitor","type":"narrow"},{"name":"anaphase promoting complex inhibition","type":"narrow"},{"name":"anaphase promoting complex inhibitor","type":"narrow"},{"name":"anaphase-promoting complex inhibition","type":"narrow"},{"name":"anaphase-promoting complex inhibitor","type":"narrow"},{"name":"down regulation of ubiquitin transferase activity","type":"exact"},{"name":"down-regulation of ubiquitin transferase activity","type":"exact"},{"name":"downregulation of ubiquitin transferase activity","type":"exact"},{"name":"inhibition of ubiquitin transferase activity","type":"narrow"},{"name":"negative regulation of ubiquitin transferase activity","type":"exact"},{"name":"ubiquitin transferase inhibitor","type":"narrow"}],"termid":"GO:0051444"}


id: MONDO:0020763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Menke-Hennekam syndrome","termid":"MONDO:0020774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menke-Hennekam syndrome 1","secondary_identifiers":["MEDGEN:1675629","UMLS:C5193034","OMIM:618332"],"synonyms":[{"name":"MKHK1","type":"related"},{"name":"Menke-Hennekam syndrome 1","type":"exact"}],"termid":"MONDO:0020763","xrefs":{"Monarch":{"xref_id":"0020763"}}}


id: PBO:0083546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized gene YCR087C-A; YCR087W is not an essential gene","termid":"PBO:0083546"}


id: MOD:00717
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a methylated phenylalanine, such as N-methyl-L-phenylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated phenylalanine","synonyms":[{"name":"MePhe","type":"exact"}],"termid":"MOD:00717"}


id: MONDO:0850421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute pancreatits that is characterized by acute inflammation of the pancreas in which the initial edematous pancreatitis evolved into necrosis accompanied by hemorrhage.","definition_xrefs":["DOID:0080999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute pancreatitis","termid":"MONDO:0006515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"acute hemorrhagic pancreatitis","secondary_identifiers":["UMLS:C0267940","MEDGEN:541079"],"termid":"MONDO:0850421","xrefs":{"Monarch":{"xref_id":"0850421"}}}


id: PBO:0109992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF181 like, unknown biological role","termid":"PBO:0109992"}


id: GO:0015658
data:
  {"annotated_genes":["SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104725,112001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"}]},"cv_name":"molecular_function","definition":"Enables the transfer of branched-chain amino acids from one side of a membrane to the other. Branched-chain amino acids are amino acids with a branched carbon skeleton without rings.","definition_xrefs":["ISBN:0815340729","GOC:bf","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"branched-chain amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9672770","GO:1901240"],"synonyms":[{"name":"branched-chain aliphatic amino acid transmembrane transporter activity","type":"exact"},{"name":"branched-chain aliphatic amino acid transporter activity","type":"exact"},{"name":"leucine/valine/isoleucine permease activity","type":"related"},{"name":"valine/tyrosine/tryptophan permease activity","type":"related"}],"termid":"GO:0015658","terms_by_termid":{"GO:0015188":null}}


id: GO:2000108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"positively_regulates","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte apoptotic process","synonyms":[{"name":"positive regulation of leukocyte apoptosis","type":"narrow"}],"termid":"GO:2000108"}


id: MONDO:0007643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-A-globulin, defect in assembly of","secondary_identifiers":["MEDGEN:342627","UMLS:C1850934","OMIM:137050","MESH:C564991"],"synonyms":[{"name":"IgA, defect in Assembly of","type":"related"},{"name":"Immunoglobulin A, defect in Assembly of","type":"related"},{"name":"gamma-A-globulin, defect in ASSEMBLY OF","type":"related"}],"termid":"MONDO:0007643","xrefs":{"Monarch":{"xref_id":"0007643"}}}


id: PBO:0076193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 2","termid":"PBO:0076193"}


id: MONDO:0018762
data:
  {"annotated_genes":["SJAG_02829","SJAG_03418","SJAG_00321","SJAG_03597","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[88784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032787"},{"annotations":[87727,87728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026763"},{"annotations":[88825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030886"}]},"cv_name":"mondo","definition":"Congenital hypopituitarism is characterized by multiple pituitary hormone deficiency, including somatotroph, thyrotroph, lactotroph, corticotroph or gonadotroph deficiencies, due to mutations of pituitary transcription factors involved in pituitary ontogenesis.","definition_xrefs":["Orphanet:467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-acquired pituitary hormone deficiency","termid":"MONDO:0019824"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_02829":null,"SJAG_03418":null,"SJAG_03597":null,"SJAG_03698":null},"genotype_count":0,"is_obsolete":false,"name":"non-acquired combined pituitary hormone deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2252","UMLS:C5680091","ICD10CM:E23.0","MEDGEN:1842250","NANDO:2200312"],"synonyms":[{"name":"congenital combined pituitary hormone deficiency","type":"exact"},{"name":"congenital hypopituitarism","type":"exact"}],"termid":"MONDO:0018762","terms_by_termid":{"MONDO:0012794":null,"MONDO:0026763":null,"MONDO:0030886":null,"MONDO:0032787":null},"xrefs":{"Monarch":{"xref_id":"0018762"}}}


id: PBO:0052729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 21","termid":"PBO:0052729"}


id: PBO:0044283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 6","termid":"PBO:0044283"}


id: GO:0034300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["GOC:mah","PMID:32839172","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporangiospore formation","termid":"GO:0034300"}


id: PBO:0046992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member C","termid":"PBO:0046992"}


id: MONDO:0008770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 1","termid":"MONDO:0015047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta type 1C","secondary_identifiers":["OMIM:204650","MEDGEN:388763","UMLS:C2673923","DOID:0110056","GARD:15136","MESH:C567147"],"synonyms":[{"name":"AI1C","type":"exact"},{"name":"amelogenesis imperfecta type IC","type":"exact"},{"name":"amelogenesis imperfecta, hypoplastic, with or without Openbite malocclusion, autosomal recessive","type":"related"},{"name":"amelogenesis imperfecta, local hypoplastic type, autosomal recessive","type":"related"},{"name":"amelogenesis imperfecta, type 1C","type":"exact"},{"name":"amelogenesis imperfecta, type IC","type":"related"},{"name":"autosomal recessive amelogenesis imperfecta hypoplastic with or without openbite malocclusion","type":"exact"},{"name":"autosomal recessive amelogenesis imperfecta local hypoplastic type","type":"exact"}],"termid":"MONDO:0008770","xrefs":{"Monarch":{"xref_id":"0008770"}}}


id: GO:0086068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between a Purkinje myocyte and its surroundings that contributes to the process of the Purkinje myocyte communicating with a ventricular cardiac muscle cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Purkinje myocyte to ventricular cardiac muscle cell communication","termid":"GO:0086068"}


id: PBO:0083541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YLR201C; ORF contains a putative intron","termid":"PBO:0083541"}


id: GO:0098595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space between the membrane of an oocyte and a surrounding membranous structure (zona pellucida or perivitelline membrane).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"perivitelline space","termid":"GO:0098595"}


id: GO:0021964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the red nucleus of the midbrain towards target cells in the spinal cord.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rubrospinal tract morphogenesis","termid":"GO:0021964"}


id: MONDO:0054696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 53","secondary_identifiers":["OMIM:617585","UMLS:C4539811","DOID:0111992","MEDGEN:1612104"],"synonyms":[{"name":"IMD53","type":"related"},{"name":"immunodeficiency 53","type":"exact"}],"termid":"MONDO:0054696","xrefs":{"Monarch":{"xref_id":"0054696"}}}


id: GO:0071981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in exit from diapause. Diapause is a neurohormonally mediated, dynamic state of low metabolic activity. Associated characteristics of this form of dormancy include reduced morphogenesis, increased resistance to environmental extremes, and altered or reduced behavioral activity. Full expression develops in a species-specific manner, usually in response to a number of environmental stimuli that precede unfavorable conditions. Once diapause has begun, metabolic activity is suppressed even if conditions favorable for development prevail. Once initiated, only certain stimuli are capable of releasing the organism from this state, and this characteristic is essential in distinguishing diapause from hibernation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from diapause","termid":"GO:0071981"}


id: GO:0004834
data:
  {"annotated_genes":["SJAG_05007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75228],"is_not":false,"summary":null,"term":"GO:0004834"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O.","definition_xrefs":["RHEA:10532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"tryptophan synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02722","EC:4.2.1.20","MetaCyc:TRYPSYN-RXN"],"synonyms":[{"name":"L-serine hydro-lyase (adding indoleglycerol-phosphate)","type":"related"},{"name":"L-serine hydro-lyase [adding 1-C-(indol-3-yl)glycerol 3-phosphate; L-tryptophan and glyceraldehyde-3-phosphate-forming]","type":"related"},{"name":"L-tryptophan synthetase activity","type":"related"},{"name":"indoleglycerol phosphate aldolase activity","type":"related"},{"name":"tryptophan desmolase activity","type":"related"},{"name":"tryptophan synthetase activity","type":"related"}],"termid":"GO:0004834","terms_by_termid":{"GO:0004834":null}}


id: PR:O74824
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gtr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein gtr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.13c","synonyms":[{"name":"Spom972h-gtr1","type":"exact"}],"termid":"PR:O74824"}


id: GO:0032343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aldosterone, a corticosteroid hormone that is produced by the zona glomerulosa of the adrenal cortex and regulates salt (sodium and potassium) and water balance.","definition_xrefs":["PMID:16527843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineralocorticoid catabolic process","termid":"GO:0006712"},{"relation_name":"is_a","term_name":"C21-steroid hormone catabolic process","termid":"GO:0008208"},{"relation_name":"is_a","term_name":"aldosterone metabolic process","termid":"GO:0032341"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"aldosterone catabolic process","termid":"GO:0032343"}


id: PBO:0036346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydratase Leu2","termid":"PBO:0036346"}


id: PBO:0018150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated sorting nexin Atg20 (predicted)","termid":"PBO:0018150"}


id: MONDO:0017604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually indolent mature B-cell lymphoma, arising from the marginal zone of lymphoid tissues. It is characterized by the presence of small to medium sized atypical lymphocytes. It comprises three entities, according to the anatomic sites involved: extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue, which affects extranodal sites (most often stomach, lung, skin, and ocular adnexa); nodal marginal zone B-cell lymphoma, which affects lymph nodes without evidence of extranodal disease; and splenic marginal zone B-cell lymphoma, which affects the spleen and splenic hilar lymph nodes, bone marrow, and often the peripheral blood.","definition_xrefs":["NCIT:C4341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent B-cell non-Hodgkin lymphoma","termid":"MONDO:0017594"},{"relation_name":"is_a","term_name":"spleen neoplasm","termid":"MONDO:0036696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"marginal zone lymphoma","secondary_identifiers":["SCTID:447100004","UMLS:C1367654","Orphanet:300912","EFO:1000630","ICDO:9699/3","DOID:0050748","MEDGEN:277950","ONCOTREE:MZL","GARD:13237"],"synonyms":[{"name":"MZBCL","type":"exact"},{"name":"MZL","type":"exact"},{"name":"lymphoma of marginal zone B cell","type":"exact"},{"name":"marginal zone B cell lymphoma","type":"exact"},{"name":"marginal zone B-cell lymphoma","type":"exact"},{"name":"marginal zone lymphoma","type":"exact"}],"termid":"MONDO:0017604","xrefs":{"Monarch":{"xref_id":"0017604"}}}


id: GO:0099589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine serotonin and transmitting a signal across a membrane by activating some effector activity. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"serotonin receptor activity","termid":"GO:0099589"}


id: PBO:0061114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 5","termid":"PBO:0061114"}


id: PATO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viviparous organism that has given birth two or more times.","definition_xrefs":["wiki:http://en.wikipedia.org/wiki/Parity_(biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parity","termid":"PATO:0002370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiparous","termid":"PATO:0002369"}


id: PBO:0058744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6868","termid":"PBO:0058744"}


id: PR:O42650
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase RIO1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10593:SF5","OMA:SCHPO00494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase rio1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.10","secondary_identifiers":["UniProtKB:O42650"],"synonyms":[{"name":"Spom972h-RIOK1","type":"exact"}],"termid":"PR:O42650"}


id: GO:0019785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A thiol-dependent isopeptidase activity that cleaves ISG15 from a target protein to which it is conjugated.","definition_xrefs":["GOC:mah","PMID:30213559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0008233","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"ISG15-specific peptidase activity","secondary_identifiers":["Reactome:R-HSA-9729725","Reactome:R-HSA-1678841","Reactome:R-HSA-9755244","Reactome:R-HSA-5653786"],"synonyms":[{"name":"ISG15-specific protease activity","type":"exact"}],"termid":"GO:0019785"}


id: PBO:0112995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP/GDP nucleotidase, essential functional component of KEOPS complex, with Bud32p, Cgi121p, Pcc1p, and Gon7p; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; homolog of human OSGEP","termid":"PBO:0112995"}


id: PBO:0028706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0028706"}


id: GO:0000740
data:
  {"annotated_genes":["SJAG_00810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"}]},"cv_name":"biological_process","definition":"The joining of 2 or more lipid bilayer membranes that surround the nucleus.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"},{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear membrane fusion","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000740","terms_by_termid":{"GO:0048288":null}}


id: PR:P87237
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4G3.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C4G3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.12c","synonyms":[{"name":"Spom972h-SPCC4G3.12c","type":"exact"}],"termid":"PR:P87237"}


id: FYPO:0001644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lithium ions measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular lithium level","synonyms":[{"name":"decreased cellular lithium ion level","type":"exact"},{"name":"decreased cellular lithium level during mitotic cell cycle","type":"related"},{"name":"decreased cellular lithium level during vegetative growth","type":"exact"},{"name":"decreased lithium accumulation","type":"related"},{"name":"reduced cellular lithium level","type":"exact"}],"termid":"FYPO:0001644"}


id: FYPO:0005303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is elongated during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated vegetative cell during cellular response to UV (obsolete FYPO:0005303)","synonyms":[{"name":"elongated cell during cellular response to UV during vegetative growth","type":"exact"},{"name":"elongated vegetative cell during cellular response to UV","type":"exact"},{"name":"elongated vegetative cell during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"elongated vegetative cell during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005303"}


id: MONDO:0014751
data:
  {"annotated_genes":["SJAG_03997","SJAG_02401"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87730,87731],"is_not":false,"summary":null,"term":"MONDO:0014751"}]},"cv_name":"mondo","definition":"Palatal anomalies-widely spaced teeth-facial dysmorphism-developmental delay syndrome is a rare, genetic multiple congenital anomalies/dysmorphic syndrome characterized by global developmental delay, axial hypotonia, palate abnormalities (including cleft palate and/or high and narrow palate), dysmorphic facial features (including prominent forehead, hypertelorism, downslanting palpebral fissures, wide nasal bridge, thin lips and widely spaced teeth), and short stature. Additional manifestations may include digital anomalies (such as brachydactyly, clinodactyly, and hypoplastic toenails), a single palmar crease, lower limb hypertonia, joint hypermobility, as well as ocular and urogenital anomalies.","definition_xrefs":["Orphanet:477993"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02401":null,"SJAG_03997":null},"genotype_count":0,"is_obsolete":false,"name":"palatal anomalies-widely spaced teeth-facial dysmorphism-developmental delay syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225229","GARD:17862","MEDGEN:895943","OMIM:616728"],"synonyms":[{"name":"CPRF","type":"related"},{"name":"cleft palate, psychomotor retardation, and distinctive FACIAL features","type":"related"},{"name":"cleft palate, psychomotor retardation, and distinctive Facial features","type":"related"},{"name":"palatal anomalies-multiple diastemata-facial dysmorphism-developmental delay syndrome","type":"exact"}],"termid":"MONDO:0014751","terms_by_termid":{"MONDO:0014751":null},"xrefs":{"Monarch":{"xref_id":"0014751"}}}


id: FYPO:0002241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid, has one or more septa, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"},{"relation_name":"is_a","term_name":"septated spheroid vegetative cell","termid":"FYPO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001312","FYPO:0000257","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"normal volume septated spheroid vegetative cell","synonyms":[{"name":"normal volume septated rounded vegetative cell","type":"exact"}],"termid":"FYPO:0002241"}


id: GO:0006173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009183"},{"relation_name":"is_a","term_name":"dADP metabolic process","termid":"GO:0046056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dADP biosynthetic process","synonyms":[{"name":"dADP anabolism","type":"exact"},{"name":"dADP biosynthesis","type":"exact"},{"name":"dADP formation","type":"exact"},{"name":"dADP synthesis","type":"exact"}],"termid":"GO:0006173"}


id: MONDO:0042496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Poisoning caused by ingesting ergotized grain or by the misdirected or excessive use of ergot as a medicine.","definition_xrefs":["MESH:D004881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxicosis","termid":"MONDO:0042497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergotism","secondary_identifiers":["icd11.foundation:1013848192","SCTID:51510002","ICD9:988.2"],"synonyms":[{"name":"Saint Anthony fire","type":"related"},{"name":"Saint Anthony's fire","type":"related"},{"name":"Saint Anthonys fire","type":"related"},{"name":"St Anthony's fire","type":"related"},{"name":"St. Anthony fire","type":"related"},{"name":"St. Anthony's fire","type":"related"},{"name":"St. Anthonys fire","type":"related"},{"name":"ergot poisoning","type":"related"},{"name":"ergot poisonings","type":"related"},{"name":"ergotism","type":"exact"},{"name":"ergotisms","type":"related"},{"name":"fire, St. Anthonys","type":"related"},{"name":"poisoning, ergot","type":"related"},{"name":"poisonings, ergot","type":"related"}],"termid":"MONDO:0042496","xrefs":{"Monarch":{"xref_id":"0042496"}}}


id: MOD:01944
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms (2-aminosuccinimidyl)acetic acid by crosslinking either an aspartic acid residue or an asparagine residue with the following residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminosuccinimide ring crosslinked residues","termid":"MOD:01944"}


id: GO:0045003
data:
  {"annotated_genes":["SJAG_03221","SJAG_01410","SJAG_02267","SJAG_01708","SJAG_02294","SJAG_02690","SJAG_02465","SJAG_00757","SJAG_02079","SJAG_02460","SJAG_00935","SJAG_04530","SJAG_02708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72804,79850,110105,119454],"is_not":false,"summary":null,"term":"GO:0045003"},{"annotations":[77568,74084,66114,76887,66955],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000730"},{"annotations":[80355],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000707"},{"annotations":[112275,109615],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[102555],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"SDSA is a major mechanism of double-strand break repair in mitosis which allows for the error-free repair of a double-strand break without the exchange of adjacent sequences. The broken DNA searches for and base pairs with a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template. Newly synthesized DNA is then displaced from the template and anneal with its complement on the other side of the double-strand break.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_00935":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281","GO:0006310"],"is_obsolete":false,"name":"double-strand break repair via synthesis-dependent strand annealing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693554"],"synonyms":[{"name":"SDSA","type":"broad"},{"name":"mitotic gene conversion","type":"related"}],"termid":"GO:0045003","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null,"GO:0045003":null,"GO:1902346":null}}


id: MONDO:0018005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-Paget disease of bone syndrome is an extremely rare, complex form of hereditary spastic paraplegia characterized by a slowly progressive spastic paraplegia (with increased muscle tone, decreased strength in the anterior tibial muscles and hyperreflexia in the lower extremities with Babinski sign) presenting in adulthood, associated with Paget disease of the bone. Cognitive decline, dementia and myopathic changes at muscle biopsy have not been reported.","definition_xrefs":["Orphanet:329475"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spastic paraplegia-Paget disease of bone syndrome","secondary_identifiers":["UMLS:C4511969","GARD:21491","MEDGEN:1388986"],"termid":"MONDO:0018005","xrefs":{"Monarch":{"xref_id":"0018005"}}}


id: FYPO:0004317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the post-anaphase array of microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal post-anaphase array","termid":"FYPO:0004316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002399","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal post-anaphase array morphology","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during mitotic cell cycle","type":"related"},{"name":"abnormal post-anaphase array morphology during vegetative growth","type":"exact"},{"name":"abnormal post-anaphase microtubule array morphology","type":"exact"}],"termid":"FYPO:0004317"}


id: GO:1905404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activated CD8-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905402"},{"relation_name":"positively_regulates","term_name":"activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905404"}


id: FYPO:0004909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that dots cannot be observed, and the protein is instead distributed throughout the nucleus.","definition_xrefs":["PomBase:mah","PMID:8937982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of punctate nuclear protein localization","termid":"FYPO:0005863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"loss of punctate nuclear protein localization, with protein distributed in nucleus","synonyms":[{"name":"abolished punctate nuclear protein localization, with protein distributed in nucleus","type":"exact"},{"name":"loss of punctate nuclear protein localisation, with protein distributed in nucleus","type":"exact"},{"name":"loss of punctate nuclear protein localization, with protein dispersed through nucleus","type":"exact"},{"name":"loss of punctate nuclear protein localization, with protein distributed in nucleus, during mitotic cell cycle","type":"related"},{"name":"loss of punctate nuclear protein localization, with protein distributed in nucleus, during vegetative growth","type":"exact"},{"name":"loss of punctate nuclear protein localization, with protein distributed throughout nucleus","type":"exact"}],"termid":"FYPO:0004909"}


id: PBO:0039590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 7 like 1 (pseudogene)","termid":"PBO:0039590"}


id: PBO:0003328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp10 (predicted)","termid":"PBO:0003328"}


id: PATO:0000690
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's being marked by breaks or interruptions.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discontinuous","secondary_identifiers":["PATO:0000426"],"synonyms":[{"name":"intermittent","type":"related"},{"name":"interrupted","type":"exact"}],"termid":"PATO:0000690"}


id: FYPO:0006235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of any macromolecular complex present in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal level of macromolecular complex","synonyms":[{"name":"normal level of macromolecular complex during mitotic cell cycle","type":"related"},{"name":"normal level of macromolecular complex during vegetative growth","type":"exact"}],"termid":"FYPO:0006235"}


id: PBO:0047805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box K2","termid":"PBO:0047805"}


id: GO:0097678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the suppressor of cytokine signaling (SOCS) family of proteins. SOCS represent an important mechanism to extinguish cytokine and growth factor receptor signaling. Individual SOCS proteins are typically induced by specific cytokines and growth factors, thereby generating a negative feedback loop. SOCS proteins have important functions in development and homeostasis, and in disease, particularly tumor suppression and anti-inflammatory functions.","definition_xrefs":["PMID:24705897","InterPro:IPR028413","PMID:23885323","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"SOCS family protein binding","synonyms":[{"name":"suppressor of cytokine signaling family protein binding","type":"exact"}],"termid":"GO:0097678"}


id: GO:0046308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of Z-phenylacetaldoxime, a member of the glucosinolate group of compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"Z-phenylacetaldoxime metabolic process","termid":"GO:0018983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Z-phenylacetaldoxime catabolic process","synonyms":[{"name":"Z-phenylacetaldoxime breakdown","type":"exact"},{"name":"Z-phenylacetaldoxime catabolism","type":"exact"},{"name":"Z-phenylacetaldoxime degradation","type":"exact"}],"termid":"GO:0046308"}


id: PBO:0049341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi","termid":"PBO:0049341"}


id: PBO:0066910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 211","termid":"PBO:0066910"}


id: PBO:0003219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid11 (predicted)","termid":"PBO:0003219"}


id: PBO:0003179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M B-type cyclin Cdc13","termid":"PBO:0003179"}


id: SO:1000109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000109 mutation_causing_out_of_frame_polypeptide_C_terminal_elongation (obsolete SO:1000109)","synonyms":[{"name":"mutation causing out of frame polypeptide C terminal elongation","type":"exact"},{"name":"out of frame polypeptide C-terminal elongation","type":"exact"}],"termid":"SO:1000109"}


id: PBO:0004740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U3B","termid":"PBO:0004740"}


id: MOD:01227
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to an L-fluorophenylalanine.","definition_xrefs":["DeltaMass:181","Unimod:127#F","OMSSA:46","PubMed:8069568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"halogenated phenylalanine","termid":"MOD:01066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated L-phenylalanine","synonyms":[{"name":"Fluoro","type":"related"},{"name":"fluorophenylalanine replacement of phenylalanine","type":"related"},{"name":"phef","type":"exact"}],"termid":"MOD:01227"}


id: GO:0031564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A positive regulation of gene expression mechanism that allows RNA polymerase to continue transcription beyond a termination site, thus allowing expression of downstream genes under specific conditions.","definition_xrefs":["ISBN:0198577788","PMID:12456320","PMID:21478900","PMID:30191803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of termination of DNA-templated transcription","termid":"GO:0060567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"transcription antitermination","synonyms":[{"name":"transcriptional readthrough","type":"exact"}],"termid":"GO:0031564"}


id: MONDO:1012797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta that occurs in dogs due to a mutation in the COL1A1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta, dog","termid":"MONDO:1011581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, type III, COL1A1-related, dog","secondary_identifiers":["OMIA:002126-9615"],"synonyms":[{"name":"osteogenesis imperfecta, type III, COL1A1-related, dog","type":"exact"}],"termid":"MONDO:1012797","xrefs":{"Monarch":{"xref_id":"1012797"}}}


id: PATO:0000324
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with medium wavelength of that portion of the visible spectrum lying between orange and green, evoked in the human observer by radiant energy with wavelengths of approximately 570 to 590 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow","termid":"PATO:0000324"}


id: GO:0000070
data:
  {"annotated_genes":["SJAG_01228","SJAG_00930","SJAG_04999","SJAG_05321","SJAG_04177","SJAG_00646","SJAG_03540","SJAG_00207","SJAG_02814","SJAG_01613","SJAG_00773","SJAG_01224","SJAG_02731","SJAG_03683","SJAG_01082","SJAG_00146","SJAG_05329","SJAG_02246","SJAG_05319","SJAG_04581","SJAG_05290","SJAG_02286","SJAG_02807","SJAG_00350","SJAG_02761","SJAG_00684","SJAG_03989","SJAG_01330","SJAG_04003","SJAG_04597","SJAG_02336","SJAG_01837","SJAG_02186","SJAG_05193","SJAG_03161","SJAG_03327","SJAG_00335","SJAG_04412","SJAG_03062","SJAG_03048","SJAG_00460","SJAG_01370","SJAG_05266","SJAG_01601","SJAG_04661","SJAG_03217","SJAG_00418","SJAG_03126","SJAG_02169","SJAG_00768","SJAG_01546","SJAG_02045","SJAG_03353","SJAG_03543","SJAG_04255","SJAG_03682","SJAG_03567","SJAG_05032","SJAG_04745","SJAG_00697","SJAG_02513","SJAG_01371","SJAG_04623","SJAG_00302","SJAG_00918","SJAG_01873","SJAG_02609","SJAG_01297","SJAG_07018","SJAG_03619","SJAG_02346","SJAG_04884","SJAG_00883","SJAG_04076","SJAG_02664","SJAG_01775","SJAG_04901","SJAG_01211","SJAG_04699","SJAG_00794","SJAG_03681","SJAG_04126","SJAG_03835","SJAG_03073","SJAG_04280","SJAG_02542","SJAG_01805","SJAG_00082","SJAG_01679","SJAG_05220","SJAG_04259","SJAG_01215","SJAG_02624","SJAG_00678","SJAG_03437","SJAG_03832","SJAG_01956","SJAG_00796","SJAG_04040","SJAG_03942","SJAG_02451","SJAG_00871","SJAG_03220","SJAG_01928","SJAG_04140","SJAG_03116","SJAG_04841","SJAG_01278","SJAG_01067"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63037,73119,92627,96166,96573,98128,107487,108312,111109,111182,113878,114168,115545,116133,116562,117928,118874],"is_not":false,"summary":null,"term":"GO:0000070"},{"annotations":[102286,112332,99799,118530,113665,89833,70184,77506,89584,91884,112286,92841,74715,66711,73786,93237,97441,107414],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[115775,105816,92569,113944,110213,109181,101488,116268,117903],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[79609,97193,77604],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[110214],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[104971,75862,98662,101122],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[96651,111877],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[113667,89835],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990893"},{"annotations":[72234,73947,108139,99651,78546,67847,61475,73557,106566,62305],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007076"},{"annotations":[102290,105818,110217],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007079"},{"annotations":[101126,105819,96062,100516,110218],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[114610,90983,114611,104355,91204,110219,110852,100518,105820,92829,102431,91590,79780,111863,105466,118923,64601,116498,96063,116093,120723,101021,115219,109458,95696],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[92191,93614,97050,102707,119589,103754],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051306"},{"annotations":[112560,102900,111580,98764,120696],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090307"},{"annotations":[116499,117560,101330,111878,108265,103714],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[66712,70185,109381],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000022"},{"annotations":[105468,96652,102292],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061805"},{"annotations":[110222,100519,99175,101758,102293,105823,103358],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[103359,101128],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140641"},{"annotations":[96654,99176,110823,78963,101129],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[104279],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[105200],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000816"},{"annotations":[96064],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[118011,107120,113945],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[118681],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[113183,95670,91844,104299,118684],"is_not":false,"rel_names":["regulates","part_of"],"summary":null,"term":"GO:0140429"},{"annotations":[96280,91845],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902846"}]},"cv_name":"biological_process","definition":"The cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. 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id: GO:0075296
data:
  {"annotated_genes":["SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104207],"is_not":false,"summary":null,"term":"GO:0075296"},{"annotations":[92574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of ascospore formation","termid":"GO:0034307"},{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"positively_regulates","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0030437","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075296","terms_by_termid":{"GO:0075296":null,"GO:1903024":null}}


id: GO:0098616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2SeO4 => diphosphate + adenylylselenate.","definition_xrefs":["PMID:2537056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"selenate adenylyltransferase (ATP) activity","secondary_identifiers":["Reactome:R-HSA-2408525"],"termid":"GO:0098616"}


id: PBO:0082787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import steps for all mitochondrially directed proteins; promotes assembly and stability of the TOM complex","termid":"PBO:0082787"}


id: PR:P08092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ran1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P08092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of sexual conjugation and meiosis (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.05","synonyms":[{"name":"Spom972h-ran1","type":"exact"}],"termid":"PR:P08092"}


id: PR:O14199
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-N-acetylglucosamine transferase subunit ALG14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00606","PANTHER:PTHR12154:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase subunit alg14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.06c","secondary_identifiers":["UniProtKB:O14199"],"synonyms":[{"name":"Spom972h-ALG14","type":"exact"},{"name":"asparagine-linked glycosylation protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14199"}


id: MONDO:0003695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon benign neoplasm of glandular epithelium characterized by the presence of clear or hobnail cells within a dense fibrous stroma.","definition_xrefs":["NCIT:C40085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"clear cell adenofibroma","termid":"MONDO:0003460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian clear cell adenofibroma","secondary_identifiers":["DOID:5897","MEDGEN:309502","UMLS:C1518694"],"synonyms":[{"name":"clear cell adenofibroma of ovary","type":"exact"},{"name":"ovarian clear cell adenofibroma","type":"exact"},{"name":"ovary clear cell adenofibroma","type":"exact"}],"termid":"MONDO:0003695","xrefs":{"Monarch":{"xref_id":"0003695"}}}


id: MONDO:0001038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"perforated corneal ulcer","secondary_identifiers":["DOID:10445","icd11.foundation:232838320","UMLS:C0151844","ICD9:370.06","SCTID:46606001","MEDGEN:508831"],"termid":"MONDO:0001038","xrefs":{"Monarch":{"xref_id":"0001038"}}}


id: FYPO:0000490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial genome maintenance is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion organization","termid":"FYPO:0000809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitochondrial genome maintenance","synonyms":[{"name":"loss of mitochondrial DNA","type":"narrow"},{"name":"mitochondrial DNA depletion","type":"narrow"},{"name":"mitochondrial genome maintenance: abnormal","type":"related"}],"termid":"FYPO:0000490"}


id: PR:O94394
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC126.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C126.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.01c","synonyms":[{"name":"Spom972h-SPCC126.01c","type":"exact"}],"termid":"PR:O94394"}


id: GO:1903358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Golgi organization.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:17562788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"Golgi organization","termid":"GO:0007030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Golgi organization","synonyms":[{"name":"regulation of Golgi organisation","type":"exact"},{"name":"regulation of Golgi organization and biogenesis","type":"related"}],"termid":"GO:1903358"}


id: GO:0022027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"cell proliferation in forebrain","termid":"GO:0021846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"interkinetic nuclear migration","termid":"GO:0022027"}


id: SO:0001883
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_translocation","termid":"SO:0001881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_translocation","synonyms":[{"name":"transcript translocation","type":"exact"}],"termid":"SO:0001883"}


id: PBO:0079632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 2","termid":"PBO:0079632"}


id: PBO:0029860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_vegetative_cell","termid":"PBO:0029860"}


id: GO:0071914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular membrane-bounded vesicle that contains prominin proteins (in mouse Prom1/CD33 or Prom2) and are found in body fluids including ventricular fluid, saliva, urine and seminal fluid. In the ventricular fluid of the developing mouse brain two major classes of these particles have been observed (P2 particles of 500-1000 nm and P4 particles of 50-80 nm) which likely originate from microvilli, primary cilia and/or the midbody of neuroepithelial cells. The physiological role is not known.","definition_xrefs":["GOC:vesicles","PMID:15976444","PMID:17109118","PMID:17283184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"prominosome","synonyms":[{"name":"prominin-containing extracellular membrane vesicle","type":"exact"}],"termid":"GO:0071914"}


id: SO:1000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transversion","termid":"SO:1000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine_to_purine_transversion","synonyms":[{"name":"pyrimidine to purine transversion","type":"exact"}],"termid":"SO:1000018"}


id: GO:1905796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intraciliary anterograde transport.","definition_xrefs":["GO_REF:0000058","PMID:27930654","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"intraciliary anterograde transport","termid":"GO:0035720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of intraciliary anterograde transport","synonyms":[{"name":"regulation of intraflagellar anterograde transport","type":"exact"}],"termid":"GO:1905796"}


id: MONDO:0011108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Stüve-Wiedemann syndrome (obsolete MONDO:0011108)","termid":"MONDO:0011108","xrefs":{"Monarch":{"xref_id":"0011108"}}}


id: MOD:00269
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(sn-1-glycerophosphoryl)-L-serine.","definition_xrefs":["RESID:AA0264","Unimod:419#S","PubMed:8645220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(sn-1-glycerophosphoryl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[(2Xi)-2,3-dihydroxypropyl]phosphonoxypropanoic acid","type":"exact"},{"name":"Glycerophospho","type":"related"},{"name":"MOD_RES O-(sn-1-glycerophosphoryl)serine","type":"exact"},{"name":"O-(sn-1-glycerophosphoryl)-L-serine","type":"exact"},{"name":"O3-(sn-1-glycerophosphoryl)-L-serine","type":"exact"},{"name":"O3-2,3-dihydroxypropyl hydrogen phosphate-L-serine ester","type":"exact"},{"name":"O3-L-serine glyceryl-1-phosphodiester","type":"exact"},{"name":"alpha-glycerophosphoryl serine","type":"exact"},{"name":"glycerophospho","type":"related"},{"name":"glycerophosphoserine","type":"exact"}],"termid":"MOD:00269"}


id: PBO:0111821
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC family","termid":"PBO:0111821"}


id: PBO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-V, dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase (predicted)","termid":"PBO:0000274"}


id: PATO:0000670
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000670 saccharin versus water value (obsolete PATO:0000670)","termid":"PATO:0000670"}


id: MONDO:0023662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 10","secondary_identifiers":["OMIM:619369","MEDGEN:1780452","UMLS:C5543531"],"synonyms":[{"name":"LMPHM10","type":"exact"}],"termid":"MONDO:0023662","xrefs":{"Monarch":{"xref_id":"0023662"}}}


id: GO:0044843
data:
  {"annotated_genes":["SJAG_00996","SJAG_00169","SJAG_03591","SJAG_03160","SJAG_03048","SJAG_01210","SJAG_03681","SJAG_02026","SJAG_01825","SJAG_01401","SJAG_01000","SJAG_03699","SJAG_05346","SJAG_00991","SJAG_02404","SJAG_01187","SJAG_02723","SJAG_01311","SJAG_00100","SJAG_02810","SJAG_04140","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80211,114018,110319,75897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000082"},{"annotations":[110856,90783,104276,103537,117905],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031568"},{"annotations":[93161,111642],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031571"},{"annotations":[100771,95189,93599,94018],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000134"},{"annotations":[104291,111154,107918,108604,119083,107755],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900087"},{"annotations":[110862,117907,117340,78514,76756,93605],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell in G1 phase commits to S phase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00100":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01187":null,"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02026":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044843","terms_by_termid":{"GO:0000082":null,"GO:0007089":null,"GO:0031568":null,"GO:0031571":null,"GO:1900087":null,"GO:2000134":null}}


id: PR:P50530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sck1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase sck1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B9.02c","synonyms":[{"name":"Spom972h-sck1","type":"exact"}],"termid":"PR:P50530"}


id: GO:0070243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of thymocyte death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"thymocyte apoptotic process","termid":"GO:0070242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thymocyte apoptotic process","synonyms":[{"name":"regulation of immature T cell apoptosis","type":"related"},{"name":"regulation of thymocyte apoptosis","type":"narrow"}],"termid":"GO:0070243"}


id: GO:0010977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"negatively_regulates","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection development","synonyms":[{"name":"growth cone collapse","type":"related"},{"name":"negative regulation of neurite biosynthesis","type":"narrow"},{"name":"negative regulation of neurite development","type":"narrow"},{"name":"negative regulation of neurite formation","type":"narrow"},{"name":"negative regulation of neurite growth","type":"narrow"}],"termid":"GO:0010977"}


id: MONDO:0006109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from mesothelial cells in the pleura. It is characterized by the presence of neoplastic epithelioid cells and sarcomatoid features.","definition_xrefs":["NCIT:C4282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant biphasic mesothelioma","secondary_identifiers":["DOID:4486","ICDO:9053/3","EFO:1000124","MEDGEN:137775","UMLS:C0334515"],"synonyms":[{"name":"biphasic mesothelioma","type":"exact"},{"name":"malignant biphasic mesothelioma","type":"exact"},{"name":"malignant biphasic mesothelioma, malignant","type":"exact"},{"name":"malignant mixed mesothelioma","type":"exact"},{"name":"mesothelioma, biphasic, malignant","type":"exact"},{"name":"mesothelioma, biphasic, malignant (morphologic abnormality)","type":"exact"},{"name":"mixed mesothelioma","type":"exact"}],"termid":"MONDO:0006109","xrefs":{"Monarch":{"xref_id":"0006109"}}}


id: PBO:0064393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase","termid":"PBO:0064393"}


id: MONDO:0002500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gliosarcoma (obsolete MONDO:0002500)","termid":"MONDO:0002500","xrefs":{"Monarch":{"xref_id":"0002500"}}}


id: GO:0034766
data:
  {"annotated_genes":["SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115352,93070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"negatively_regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transmembrane ion transport","type":"exact"},{"name":"down-regulation of transmembrane ion transport","type":"exact"},{"name":"downregulation of transmembrane ion transport","type":"exact"},{"name":"inhibition of transmembrane ion transport","type":"narrow"},{"name":"negative regulation of ion membrane transport","type":"exact"},{"name":"negative regulation of ion transmembrane transport","type":"broad"},{"name":"negative regulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034766","terms_by_termid":{"GO:1905949":null}}


id: PBO:0027707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_polymerase_processivity_factor_activity","termid":"PBO:0027707"}


id: MONDO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the hypoglossal nerve.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoglossal nerve disorder","secondary_identifiers":["MEDGEN:57513","NCIT:C26954","MESH:D020437","DOID:13814","SCTID:24777009","UMLS:C0152181","ICD9:352.5"],"synonyms":[{"name":"disease of hypoglossal nerve","type":"exact"},{"name":"disease or disorder of hypoglossal nerve","type":"exact"},{"name":"disorder of 12th nerve","type":"exact"},{"name":"disorder of XII nerve","type":"exact"},{"name":"disorder of hypoglossal [12th] nerve","type":"exact"},{"name":"disorder of hypoglossal nerve","type":"exact"},{"name":"disorder of the XII nerve","type":"exact"},{"name":"hypoglossal nerve disease","type":"exact"},{"name":"hypoglossal nerve disease or disorder","type":"exact"},{"name":"hypoglossal nerve disorder","type":"exact"},{"name":"twelfth nerve disorder","type":"exact"}],"termid":"MONDO:0001810","xrefs":{"Monarch":{"xref_id":"0001810"}}}


id: GO:1905668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to endosome.","definition_xrefs":["PMID:22732145","GOC:PARL","GOC:bc","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to endosome","termid":"GO:1905666"},{"relation_name":"positively_regulates","term_name":"protein localization to endosome","termid":"GO:0036010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to endosome","synonyms":[{"name":"activation of protein localisation in endosome","type":"narrow"},{"name":"activation of protein localization in endosome","type":"narrow"},{"name":"activation of protein localization to endosome","type":"narrow"},{"name":"positive regulation of protein localisation in endosome","type":"exact"},{"name":"positive regulation of protein localization in endosome","type":"exact"},{"name":"up regulation of protein localisation in endosome","type":"exact"},{"name":"up regulation of protein localization in endosome","type":"exact"},{"name":"up regulation of protein localization to endosome","type":"exact"},{"name":"up-regulation of protein localisation in endosome","type":"exact"},{"name":"up-regulation of protein localization in endosome","type":"exact"},{"name":"up-regulation of protein localization to endosome","type":"exact"},{"name":"upregulation of protein localisation in endosome","type":"exact"},{"name":"upregulation of protein localization in endosome","type":"exact"},{"name":"upregulation of protein localization to endosome","type":"exact"}],"termid":"GO:1905668"}


id: GO:0000159
data:
  {"annotated_genes":["SJAG_00600","SJAG_00229","SJAG_00078","SJAG_03353","SJAG_00526","SJAG_01270","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63584,66071,72864,73486,77623,80047,106428],"is_not":false,"summary":null,"term":"GO:0000159"}]},"cv_name":"cellular_component","definition":"A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit.","definition_xrefs":["ISBN:0198547684","GOC:mah","PMID:17245430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_01270":null,"SJAG_03353":null,"SJAG_03681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein phosphatase type 2A complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PP2A complex","type":"exact"},{"name":"PP2A-pi","type":"narrow"},{"name":"PP2a-protector","type":"narrow"},{"name":"protein phosphatase 2 complex","type":"related"}],"termid":"GO:0000159","terms_by_termid":{"GO:0000159":null}}


id: MONDO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or subacute inflammatory process of the central nervous system characterized histologically by multiple foci of perivascular demyelination. Symptom onset usually occurs several days after an acute viral infection or immunization, but it may coincide with the onset of infection or rarely no antecedent event can be identified. Clinical manifestations include confusion, somnolence, fever, nuchal rigidity, and involuntary movements. The illness may progress to coma and eventually be fatal. (Adams et al., Principles of Neurology, 6th ed, p921)","definition_xrefs":["MESH:D004673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-vaccinal encephalitis","secondary_identifiers":["ICD9:323.51","DOID:13664","SCTID:31367003","MEDGEN:152946","UMLS:C0751101"],"synonyms":[{"name":"encephalitis following immunisation procedures","type":"exact"},{"name":"encephalitis following immunization procedures","type":"exact"},{"name":"postvaccinal encephalomyelitis","type":"exact"}],"termid":"MONDO:0001773","xrefs":{"Monarch":{"xref_id":"0001773"}}}


id: MONDO:0700205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehrlichiosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease, non-human animal","termid":"MONDO:0700113"},{"relation_name":"is_a","term_name":"tick-borne infectious disease, non-human animal","termid":"MONDO:0700201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ehrlichiosis, non-human animal","termid":"MONDO:0700205","xrefs":{"Monarch":{"xref_id":"0700205"}}}


id: GO:0019293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of phenylalanine to tyrosine.","definition_xrefs":["PMID:4004813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"tyrosine biosynthetic process, by oxidation of phenylalanine","secondary_identifiers":["MetaCyc:PWY-6134","GO:0019291"],"synonyms":[{"name":"L-tyrosine biosynthesis IV","type":"exact"},{"name":"tyrosine anabolism, by oxidation of phenylalanine","type":"exact"},{"name":"tyrosine formation, by oxidation of phenylalanine","type":"exact"},{"name":"tyrosine synthesis, by oxidation of phenylalanine","type":"exact"}],"termid":"GO:0019293"}


id: PBO:0080221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasoactive intestinal peptide receptor 1","termid":"PBO:0080221"}


id: PBO:0054243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1625","termid":"PBO:0054243"}


id: FYPO:0001034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tunicamycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to tunicamycin","synonyms":[{"name":"resistance to tunicamycin during mitotic cell cycle","type":"related"},{"name":"resistance to tunicamycin during vegetative growth","type":"exact"},{"name":"resistant to TM","type":"exact"},{"name":"resistant to tunicamycin","type":"exact"}],"termid":"FYPO:0001034"}


id: GO:0043733
data:
  {"annotated_genes":["SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008725"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 3-methylbase + H2O = DNA with abasic site + 3-methylbase. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methylpurine or 3-methylpyrimidine base and the deoxyribose sugar to remove the methylated base, leaving an apurinic or apyrimidinic site.","definition_xrefs":["PMID:14517230","PMID:10777493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylbase DNA N-glycosylase activity","termid":"GO:0003905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"DNA-3-methylbase glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-3-methyladenine glycosylase III","type":"related"},{"name":"Mag III","type":"narrow"},{"name":"MagIII","type":"narrow"}],"termid":"GO:0043733","terms_by_termid":{"GO:0008725":null}}


id: SO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A heterochromatic region of the chromosome, adjacent to the telomere (on the centromeric side) that contains repetitive DNA and sometimes genes and it is transcribed.","definition_xrefs":["POMBE:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtelomere","termid":"SO:0001997"}


id: PBO:0086462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metal transporter involved in mitochondrial iron accumulation; MMT1 has a paralog, MMT2, that arose from the whole genome duplication","termid":"PBO:0086462"}


id: PR:Q9Y7S9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aah3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.02c","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aah3","type":"exact"}],"termid":"PR:Q9Y7S9"}


id: MONDO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive hypophosphatemic rickets (obsolete MONDO:0000555)","termid":"MONDO:0000555","xrefs":{"Monarch":{"xref_id":"0000555"}}}


id: PBO:0053479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 452","termid":"PBO:0053479"}


id: PBO:0059052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX network transcriptional repressor","termid":"PBO:0059052"}


id: PR:Q92340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shu1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein C1F8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.02c","synonyms":[{"name":"Spom972h-shu1","type":"exact"}],"termid":"PR:Q92340"}


id: GO:0032199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of DNA from an RNA transposon intermediate.","definition_xrefs":["GOC:jp","GOC:txnOH","ISBN:1555812090"],"gene_count":0,"genotype_count":0,"name":"obsolete reverse transcription involved in RNA-mediated transposition (obsolete GO:0032199)","synonyms":[{"name":"reverse transcription during retrotransposition","type":"exact"}],"termid":"GO:0032199"}


id: FYPO:0002926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and polyadenylated RNA (poly(A)RNA) does not occur. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-RNA interaction","termid":"FYPO:0002133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002131"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0002131","FYPO:0001985"],"is_obsolete":false,"name":"abolished poly(A) RNA binding","synonyms":[{"name":"abolished adenosine recognition in polyA tail","type":"narrow"},{"name":"abolished polyA RNA binding","type":"exact"},{"name":"abolished polyadenylated RNA binding","type":"exact"},{"name":"abolished protein-poly(A) RNA interaction","type":"exact"},{"name":"poly(A) RNA binding abolished","type":"exact"}],"termid":"FYPO:0002926"}


id: PATO:0001974
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating in a round end, the centre of which is depressed.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blunt","termid":"PATO:0001950"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retuse","termid":"PATO:0001974"}


id: GO:0051687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the spindle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle localization","termid":"GO:0051653"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of spindle location","synonyms":[{"name":"maintenance of spindle localization","type":"related"}],"termid":"GO:0051687"}


id: GO:0019313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving allose, allo-hexose, an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete allose metabolic process (obsolete GO:0019313)","synonyms":[{"name":"allose metabolism","type":"exact"}],"termid":"GO:0019313"}


id: GO:0018529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrilotriacetate + FMNH2 + O2 = aminodiacetate + FMN + glyoxylate + H2O.","definition_xrefs":["RHEA:31359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitrilotriacetate monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0587","EC:1.14.14.10","KEGG_REACTION:R09798","MetaCyc:RXN-9508"],"termid":"GO:0018529"}


id: MONDO:0003656
data:
  {"annotated_genes":["SJAG_04881","SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[87796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"}]},"cv_name":"mondo","definition":"A laboratory test result which indicates free hemoglobin in the urine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"is_a","term_name":"proteinuria","termid":"MONDO:0003634"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_04881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hemoglobinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:582","ICD10CM:R82.3","MEDGEN:6792","UMLS:C0019048","MESH:D006456","ICD9:791.2"],"termid":"MONDO:0003656","terms_by_termid":{"MONDO:0010438":null,"MONDO:0014166":null},"xrefs":{"Monarch":{"xref_id":"0003656"}}}


id: PBO:0042616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol synthase 2","termid":"PBO:0042616"}


id: GO:0001163
data:
  {"annotated_genes":["SJAG_02747","SJAG_00692","SJAG_05253","SJAG_02813","SJAG_00202"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81686,105272],"is_not":false,"summary":null,"term":"GO:0001163"},{"annotations":[80990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001165"},{"annotations":[77513,81053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001164"}]},"cv_name":"molecular_function","definition":"Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase I.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00202":null,"SJAG_00692":null,"SJAG_02747":null,"SJAG_02813":null,"SJAG_05253":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0000976","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase I transcription regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001013"],"synonyms":[{"name":"RNA polymerase I regulatory region DNA binding","type":"related"}],"termid":"GO:0001163","terms_by_termid":{"GO:0001163":null,"GO:0001164":null,"GO:0001165":null}}


